# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/Methyltransf_15.hmm.txt
# target sequence database: proteomes/Amphimedon_queenslandica.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: Methyltransf_15 [M=165]
Accession: PF09445.9
Description: RNA cap guanine-N2 methyltransferase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.5e-40 139.2 0.1 5.6e-40 138.0 0.0 1.7 2 tr|A0A1X7UDY4|A0A1X7UDY4_AMPQE Uncharacterized protein OS=Amphi
2.4e-06 28.6 0.1 3.4e-06 28.1 0.1 1.3 1 tr|A0A1X7TED2|A0A1X7TED2_AMPQE Uncharacterized protein OS=Amphi
0.0015 19.5 0.0 0.0038 18.2 0.0 1.7 1 tr|A0A1X7U0X0|A0A1X7U0X0_AMPQE Uncharacterized protein OS=Amphi
0.0028 18.6 0.1 0.0067 17.4 0.1 1.6 1 tr|A0A1X7UN48|A0A1X7UN48_AMPQE Uncharacterized protein OS=Amphi
------ inclusion threshold ------
0.038 14.9 0.0 0.06 14.3 0.0 1.3 1 tr|A0A1X7VKX0|A0A1X7VKX0_AMPQE Uncharacterized protein OS=Amphi
0.11 13.5 0.4 0.2 12.6 0.4 1.5 1 tr|A0A1X7UT69|A0A1X7UT69_AMPQE Uncharacterized protein OS=Amphi
0.17 12.8 0.0 0.29 12.1 0.0 1.4 1 tr|A0A1X7VJD9|A0A1X7VJD9_AMPQE Ubiquinone biosynthesis O-methyl
Domain annotation for each sequence (and alignments):
>> tr|A0A1X7UDY4|A0A1X7UDY4_AMPQE Uncharacterized protein OS=Amphimedon queenslandica OX=400682 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -3.3 0.0 2.5 1.5e+04 110 132 .. 565 587 .. 546 622 .. 0.72
2 ! 138.0 0.0 9.1e-44 5.6e-40 3 164 .. 804 956 .. 802 957 .. 0.95
Alignments for each domain:
== domain 1 score: -3.3 bits; conditional E-value: 2.5
Methyltransf_15 110 svklskniilfLPrnsdlkqlaa 132
+++ kn+++ L r+s++ l++
tr|A0A1X7UDY4|A0A1X7UDY4_AMPQE 565 HTRKFKNLLFKLYRQSQTSRLSK 587
56777888888888888888854 PP
== domain 2 score: 138.0 bits; conditional E-value: 9.1e-44
Methyltransf_15 3 vvlDlfgGaGGnviqfanvfekviaidinlsrlklaqhNaevYgvsdkvtlvlgdvfellaklkleeikvdlvflSpPw 81
+++D+f+G G n+iqfa + e+viaidi++ ++++a hNae+Ygv+d+++++lgd+f+++ +lk + vd+vf+SpPw
tr|A0A1X7UDY4|A0A1X7UDY4_AMPQE 804 LLVDAFCGVGSNAIQFAYTCERVIAIDIDPVKIACARHNAEIYGVADRIEFILGDYFDIMPHLK---C-VDVVFISPPW 878
789***********************************************************76...4.699******* PP
Methyltransf_15 82 GGpsYkkkekfdlekkleplklekllkesvklskniilfLPrnsdlkqlaaltaevlenaskvkvvklkenglvkalla 160
GGp+Y e+fdl +++ l+ ++++++ +++ +i +LPrn ++ql ++ v ++ +++ + n +k+++a
tr|A0A1X7UDY4|A0A1X7UDY4_AMPQE 879 GGPKYLSAEVFDL-ETMVSLNGVRVFEVARQVTPHISYYLPRNIGVDQLMSM---VSAGEP-IELEQQFMNRKLKTITA 952
*************.9999*********************************9...666666.999999999999***** PP
Methyltransf_15 161 ylge 164
y+ge
tr|A0A1X7UDY4|A0A1X7UDY4_AMPQE 953 YFGE 956
*996 PP
>> tr|A0A1X7TED2|A0A1X7TED2_AMPQE Uncharacterized protein OS=Amphimedon queenslandica OX=400682 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 28.1 0.1 5.5e-10 3.4e-06 2 84 .. 63 144 .. 62 175 .. 0.84
Alignments for each domain:
== domain 1 score: 28.1 bits; conditional E-value: 5.5e-10
Methyltransf_15 2 evvlDlfgGaGGnviqfanv.fekviaidinlsrlklaqhNaevYgv.sdkvtlvlgdvfellaklkleeikvdlvflS 78
++v+Dl +G+G + e+v aidi+++ +kl+q Na+ g+ sd++ ++++d++++ + k++++ d v++
tr|A0A1X7TED2|A0A1X7TED2_AMPQE 63 RTVIDLGCGSGILGLGCLLLgAERVTAIDIDPNCVKLTQSNANDLGIsSDQLSVIQCDIKTIDTD-KFDRA--DTVIMN 138
578999999996655554443689**********************9889********9876555.99999..****** PP
Methyltransf_15 79 pPwGGp 84
pP G
tr|A0A1X7TED2|A0A1X7TED2_AMPQE 139 PPFGTK 144
***965 PP
>> tr|A0A1X7U0X0|A0A1X7U0X0_AMPQE Uncharacterized protein OS=Amphimedon queenslandica OX=400682 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 18.2 0.0 6.1e-07 0.0038 3 83 .. 64 143 .. 62 172 .. 0.84
Alignments for each domain:
== domain 1 score: 18.2 bits; conditional E-value: 6.1e-07
Methyltransf_15 3 vvlDlfgGaGGnviqfanv.fekviaidinlsrlklaqhNaevYgv.sdkvtlvlgdvfellaklkleeikvdlvflSp 79
+v+Dl +G+G + e+v aidi+++ +kl+q Na+ g+ sd++ +++ d++++ + +++++ d v++ p
tr|A0A1X7U0X0|A0A1X7U0X0_AMPQE 64 TVVDLGCGSGILGLGCLLLgAERVTAIDIDPNCVKLTQSNANDLGIsSDQLSVIQYDIKTIDTD-QFDRA--DTVIMNP 139
67888888886555544443689**********************97899*******9876555.88888..9****** PP
Methyltransf_15 80 PwGG 83
P G
tr|A0A1X7U0X0|A0A1X7U0X0_AMPQE 140 PFGT 143
**96 PP
>> tr|A0A1X7UN48|A0A1X7UN48_AMPQE Uncharacterized protein OS=Amphimedon queenslandica OX=400682 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 17.4 0.1 1.1e-06 0.0067 4 83 .. 489 571 .. 487 595 .. 0.75
Alignments for each domain:
== domain 1 score: 17.4 bits; conditional E-value: 1.1e-06
Methyltransf_15 4 vlDlfgGaGGnviqfanv..fekviaidinlsrlklaqhNaevYgvsdkvtlvlgdvfellaklkleei.kvd.lvflS 78
+ D+++G+G +a++ ++vi+i+ n++ +k a+hNa + g+ ++ +++g ++++ + le+ d + ++
tr|A0A1X7UN48|A0A1X7UN48_AMPQE 489 LYDICCGTGTIGLSVAKTvpLSQVIGIELNEQAVKNAEHNAVLNGI-KNCRYMCGRAEDVIPSHMLESYgIDDaIAVVD 566
57*******9988888887789*******************99987.56889999888866665555553222133455 PP
Methyltransf_15 79 pPwGG 83
pP G
tr|A0A1X7UN48|A0A1X7UN48_AMPQE 567 PPRSG 571
55555 PP
>> tr|A0A1X7VKX0|A0A1X7VKX0_AMPQE Uncharacterized protein OS=Amphimedon queenslandica OX=400682 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 14.3 0.0 9.6e-06 0.06 3 58 .. 234 291 .. 232 342 .. 0.83
Alignments for each domain:
== domain 1 score: 14.3 bits; conditional E-value: 9.6e-06
Methyltransf_15 3 vvlDlfgGaGGnviqfanv...fekviaidinlsrlklaqhNaevYgvsdkvtlvlgdv 58
vlD+++ GG++ ++a +ia+d + ++k +hN + +g +v++ + d
tr|A0A1X7VKX0|A0A1X7VKX0_AMPQE 234 RVLDMCAAPGGKATHLATLmrnKGVIIALDRSAGKMKSLKHNVKRFGL-TNVHCFHHDS 291
68***************984432359********************75.4555555554 PP
>> tr|A0A1X7UT69|A0A1X7UT69_AMPQE Uncharacterized protein OS=Amphimedon queenslandica OX=400682 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 12.6 0.4 3.2e-05 0.2 3 108 .. 41 150 .. 39 215 .. 0.58
Alignments for each domain:
== domain 1 score: 12.6 bits; conditional E-value: 3.2e-05
Methyltransf_15 3 vvlDlfgGaGGnviqfanvfekviaidinlsrlklaqh....NaevYg..v...sdkvtlvlgdvfellaklkleeikv 72
+vlD+ +G+G + ++ + +++i+i++n + ++ a++ N + Y+ + ++ v +++dv + l+ +
tr|A0A1X7UT69|A0A1X7UT69_AMPQE 41 TVLDIGCGTGNYAKELSPYIKEIIGIEVNSKMIEEANNkgieNFKTYEgnIsdlHKIVPEKCCDVVICTLVLHHLK--- 116
79******************************99886434448888852222212333445666654222221111... PP
Methyltransf_15 73 dlvflSpPwGGpsYkkkekfdlekkleplklekllk 108
d v p Gps ++++++ ++ + ++++ +
tr|A0A1X7UT69|A0A1X7UT69_AMPQE 117 DSV--PPDYSGPSKVINDVYSVLNDKGAFIINTMGH 150
111..3345666666666666655544444444444 PP
>> tr|A0A1X7VJD9|A0A1X7VJD9_AMPQE Ubiquinone biosynthesis O-methyltransferase, mitochondrial OS=Amphimedon queenslandic
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 12.1 0.0 4.7e-05 0.29 4 78 .. 103 187 .. 101 249 .. 0.78
Alignments for each domain:
== domain 1 score: 12.1 bits; conditional E-value: 4.7e-05
Methyltransf_15 4 vlDlfgGaGGnviqfanvfekviaidinlsrlklaqhNa....evYgvsdkvtlvlgdvfellaklkleei......kv 72
+lD+ +G+G + + + + v +id n+ +++a+ + +++d+v++ + +++l++ + +
tr|A0A1X7VJD9|A0A1X7VJD9_AMPQE 103 ILDVGCGGGILCESLGELGSDVLGIDPNPVAINVATTHLmltkNSSDIKDRVKYQSCSLEDLIKADSEPIDtdssseDF 181
89**************************99998876543122267799************9666432211112223357 PP
Methyltransf_15 73 dlvflS 78
d+v++S
tr|A0A1X7VJD9|A0A1X7VJD9_AMPQE 182 DCVVAS 187
888887 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (165 nodes)
Target sequences: 43435 (14716620 residues searched)
Passed MSV filter: 1335 (0.0307356); expected 868.7 (0.02)
Passed bias filter: 944 (0.0217336); expected 868.7 (0.02)
Passed Vit filter: 81 (0.00186486); expected 43.4 (0.001)
Passed Fwd filter: 7 (0.00016116); expected 0.4 (1e-05)
Initial search space (Z): 43435 [actual number of targets]
Domain search space (domZ): 7 [number of targets reported over threshold]
# CPU time: 0.23u 0.01s 00:00:00.24 Elapsed: 00:00:00.11
# Mc/sec: 22074.93
//
[ok]