# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/Methyltransf_15.hmm.txt
# target sequence database: proteomes/Natronomonas_moolapensis.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: Methyltransf_15 [M=165]
Accession: PF09445.9
Description: RNA cap guanine-N2 methyltransferase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4e-05 20.7 0.0 5.6e-05 20.3 0.0 1.2 1 tr|M1Y3X8|M1Y3X8_NATM8 tRNA (Guanine(37)-N(1))-methyltransfe
7e-05 19.9 0.0 9.1e-05 19.6 0.0 1.2 1 tr|M1XN99|M1XN99_NATM8 tRNA(Phe) (4-demethylwyosine(37)-C(7)
0.00021 18.4 0.0 0.00023 18.2 0.0 1.2 1 tr|M1Y4D2|M1Y4D2_NATM8 Probable S-adenosylmethionine-depende
0.00096 16.2 0.0 0.0017 15.4 0.0 1.4 2 tr|M1XS10|M1XS10_NATM8 Probable rRNA methyltransferase OS=Na
0.0025 14.9 0.0 0.0035 14.4 0.0 1.2 1 tr|M1XLF5|M1XLF5_NATM8 tRNA (Guanine(10),N(2))-dimethyltrans
0.0043 14.1 0.0 0.006 13.6 0.0 1.2 1 tr|M1XL08|M1XL08_NATM8 Probable arsenite(III)-methyltransfer
0.0077 13.3 0.0 0.011 12.8 0.0 1.2 1 tr|M1XLH6|M1XLH6_NATM8 Homolog to S-adenosylmethionine-depen
------ inclusion threshold ------
0.016 12.3 0.0 0.027 11.5 0.0 1.3 1 tr|M1Y1K5|M1Y1K5_NATM8 Site-specific DNA-methyltransferase (
Domain annotation for each sequence (and alignments):
>> tr|M1Y3X8|M1Y3X8_NATM8 tRNA (Guanine(37)-N(1))-methyltransferase OS=Natronomonas moolapensis (strain DSM 18674 / JCM
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 20.3 0.0 1.6e-07 5.6e-05 3 61 .. 180 238 .. 178 286 .. 0.89
Alignments for each domain:
== domain 1 score: 20.3 bits; conditional E-value: 1.6e-07
Methyltransf_15 3 vvlDlfgGaGGnviqfanvfekviaidinlsrlklaqhNaevYgvsdkvtlvlgdvfel 61
v D+f+G G ++ a+ + +++d n+ ++ +Nae gvsd+v + +dv ++
tr|M1Y3X8|M1Y3X8_NATM8 180 RVFDMFAGVGPFIVPAAKRGAECVGVDLNEAAVEYLRRNAERNGVSDRVIAINADVRDV 238
689****************************************************9873 PP
>> tr|M1XN99|M1XN99_NATM8 tRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase OS=Natronomonas moolapen
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 19.6 0.0 2.7e-07 9.1e-05 3 61 .. 198 256 .. 196 304 .. 0.87
Alignments for each domain:
== domain 1 score: 19.6 bits; conditional E-value: 2.7e-07
Methyltransf_15 3 vvlDlfgGaGGnviqfanvfekviaidinlsrlklaqhNaevYgvsdkvtlvlgdvfel 61
v D+f+G G + +a+ +v a +i+++ + +Na+ gv+ +v+ vlgd+ ++
tr|M1XN99|M1XN99_NATM8 198 RVFDMFAGIGYFSLPMARAEASVTAAEIDPTAHRRLVENARRNGVAARVEAVLGDCRSV 256
689*****************************************************883 PP
>> tr|M1Y4D2|M1Y4D2_NATM8 Probable S-adenosylmethionine-dependent methyltransferase OS=Natronomonas moolapensis (strain
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 18.2 0.0 6.8e-07 0.00023 3 60 .. 47 104 .. 45 175 .. 0.84
Alignments for each domain:
== domain 1 score: 18.2 bits; conditional E-value: 6.8e-07
Methyltransf_15 3 vvlDlfgGaGGnviqfanvfekviaidinlsrlklaqhNaevYgvsdkvtlvlgdvfe 60
+l + +G+G ++ +a ++++di++ l++ + a+ gv++ + +++gd
tr|M1Y4D2|M1Y4D2_NATM8 47 RILEVACGTGRFTVMLADRGADIVGMDISEAMLEQGRRKARSAGVDESLSFIQGDAGR 104
6899***************************************************876 PP
>> tr|M1XS10|M1XS10_NATM8 Probable rRNA methyltransferase OS=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 15.4 0.0 4.9e-06 0.0017 2 82 .. 56 133 .. 55 162 .. 0.82
2 ? -2.9 0.0 2.2 7.5e+02 8 23 .. 171 188 .. 164 208 .. 0.65
Alignments for each domain:
== domain 1 score: 15.4 bits; conditional E-value: 4.9e-06
Methyltransf_15 2 evvlDlfgGaGGnviqfanvf.ekviaidinlsrlklaqhNaevYgvsdkvtlvlgdvfellaklkleeikvdlvflSpPwG 82
++vlDl +G+G + a+ e v+++di++ l a +N + g v +v gdv++l ++ v++ pP G
tr|M1XS10|M1XS10_NATM8 56 RTVLDLGCGTGMLALGAALRGpELVVGVDIDPAPLSTARENERRVGAMTDVSWVRGDVTDLPLVPGGDA----TVLMNPPFG 133
579***************99624699********************************98533322222....355555555 PP
== domain 2 score: -2.9 bits; conditional E-value: 2.2
Methyltransf_15 8 fgG.aGGnviq.fanvfe 23
f+G GG+v + fa +fe
tr|M1XS10|M1XS10_NATM8 171 FAGdNGGQVTHaFAAEFE 188
555346665432666664 PP
>> tr|M1XLF5|M1XLF5_NATM8 tRNA (Guanine(10),N(2))-dimethyltransferase OS=Natronomonas moolapensis (strain DSM 18674 / J
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 14.4 0.0 1e-05 0.0035 3 45 .. 178 220 .. 176 242 .. 0.92
Alignments for each domain:
== domain 1 score: 14.4 bits; conditional E-value: 1e-05
Methyltransf_15 3 vvlDlfgGaGGnviqfanvfekviaidinlsrlklaqhNaevY 45
+lD+++G+GG ++ + +v+++d + + ++ +++N +Y
tr|M1XLF5|M1XLF5_NATM8 178 RILDPMCGTGGILVEAGLAGASVVGVDAQAKMVRGTERNLAAY 220
68**************************************999 PP
>> tr|M1XL08|M1XL08_NATM8 Probable arsenite(III)-methyltransferase OS=Natronomonas moolapensis (strain DSM 18674 / JCM
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 13.6 0.0 1.8e-05 0.006 3 61 .. 98 158 .. 96 187 .. 0.79
Alignments for each domain:
== domain 1 score: 13.6 bits; conditional E-value: 1.8e-05
Methyltransf_15 3 vvlDlfgGaGGnviqfanv...fekviaidinlsrlklaqhNaevYgvsdkvtlvlgdvfel 61
vlDl +GaG ++ a++ +vi++d+ ++ +k a Na g +++v++ lg++++l
tr|M1XL08|M1XL08_NATM8 98 AVLDLGSGAGFDCFLAAQEvgeTGRVIGVDMTPEMIKKARANASQNG-AENVEFRLGEIEHL 158
69***********999998777669******************9985.67899999998874 PP
>> tr|M1XLH6|M1XLH6_NATM8 Homolog to S-adenosylmethionine-dependent methyltransferase OS=Natronomonas moolapensis (stra
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 12.8 0.0 3.2e-05 0.011 4 76 .. 40 108 .. 38 132 .. 0.84
Alignments for each domain:
== domain 1 score: 12.8 bits; conditional E-value: 3.2e-05
Methyltransf_15 4 vlDlfgGaGGnviqfanvfekviaidinlsrlklaqhNaevYgvsdkvtlvlgdvfellaklkleeikvdlvf 76
lD+ +G+G n+ +a+ v a+d++ + l+ a + a gv vt++ +d+++ l++++ dl+
tr|M1XLH6|M1XLH6_NATM8 40 ALDVATGTGRNALYLAEHGYDVEAVDVSDEALARARRRADERGV--DVTWIRADLTDPGFDLETGAY--DLIT 108
69****************99*******************99977..599999999874443333333..5554 PP
>> tr|M1Y1K5|M1Y1K5_NATM8 Site-specific DNA-methyltransferase (Cytosine-specific) OS=Natronomonas moolapensis (strain D
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.5 0.0 8e-05 0.027 4 33 .. 5 35 .. 3 54 .. 0.78
Alignments for each domain:
== domain 1 score: 11.5 bits; conditional E-value: 8e-05
Methyltransf_15 4 vlDlfgGaGGnviqfanvfekv.iaidinls 33
+Dlf+GaGG ++ +++ v +idi+++
tr|M1Y1K5|M1Y1K5_NATM8 5 AIDLFCGAGGLTNGLERAGICVeAGIDIDPD 35
69**************996555256888765 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (165 nodes)
Target sequences: 2723 (809592 residues searched)
Passed MSV filter: 50 (0.0183621); expected 54.5 (0.02)
Passed bias filter: 50 (0.0183621); expected 54.5 (0.02)
Passed Vit filter: 15 (0.00550863); expected 2.7 (0.001)
Passed Fwd filter: 8 (0.00293794); expected 0.0 (1e-05)
Initial search space (Z): 2723 [actual number of targets]
Domain search space (domZ): 8 [number of targets reported over threshold]
# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
# Mc/sec: 13358.27
//
[ok]