# hmmsearch :: search profile(s) against a sequence database # HMMER 3.1b2 (February 2015); http://hmmer.org/ # Copyright (C) 2015 Howard Hughes Medical Institute. # Freely distributed under the GNU General Public License (GPLv3). # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query HMM file: pfam_list/Methyltransf_4.hmm.txt # target sequence database: proteomes/Dictyostelium_discoideum.fasta # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: Methyltransf_4 [M=173] Accession: PF02390.16 Description: Putative methyltransferase Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.6e-52 175.8 0.0 4.9e-52 175.4 0.0 1.2 1 sp|Q551M3|TRMB_DICDI tRNA (guanine-N(7)-)-methyltransferas 2.8e-24 85.0 0.0 2.8e-24 85.0 0.0 2.7 2 tr|Q55EX4|Q55EX4_DICDI Uncharacterized protein OS=Dictyostel 2.1e-05 23.6 6.7 0.00049 19.1 1.6 2.3 2 tr|Q54BE3|Q54BE3_DICDI Uncharacterized protein OS=Dictyostel 0.00018 20.6 1.2 0.0017 17.4 0.8 2.4 2 tr|Q86I59|Q86I59_DICDI Methyltransferase-like protein OS=Dic 0.00021 20.3 0.0 0.00037 19.5 0.0 1.5 1 tr|Q54UI9|Q54UI9_DICDI Uncharacterized protein OS=Dictyostel 0.00039 19.5 0.0 0.0057 15.7 0.0 2.4 2 tr|Q55GB9|Q55GB9_DICDI Uncharacterized protein OS=Dictyostel 0.0011 18.0 0.0 0.0018 17.3 0.0 1.3 1 tr|Q54VE3|Q54VE3_DICDI Uncharacterized protein OS=Dictyostel 0.0012 17.9 0.0 0.0012 17.9 0.0 2.8 3 tr|Q54C42|Q54C42_DICDI Uncharacterized protein OS=Dictyostel 0.0013 17.7 0.1 0.0023 16.9 0.1 1.4 1 tr|Q54UI8|Q54UI8_DICDI Uncharacterized protein OS=Dictyostel 0.0033 16.4 0.1 0.0076 15.2 0.0 1.6 2 tr|Q54BE2|Q54BE2_DICDI Uncharacterized protein OS=Dictyostel 0.0044 16.0 1.1 0.013 14.5 0.0 2.5 2 sp|Q8T199|OMT3_DICDI O-methyltransferase 3 OS=Dictyosteliu ------ inclusion threshold ------ 0.011 14.8 0.0 0.02 13.9 0.0 1.4 1 sp|Q54QK7|DIM1_DICDI Probable dimethyladenosine transferas 0.012 14.6 0.0 0.036 13.0 0.0 1.7 2 tr|Q54JJ5|Q54JJ5_DICDI Methyltransferase type 11 domain-cont 0.017 14.1 0.0 0.23 10.5 0.0 2.0 2 tr|Q54Y42|Q54Y42_DICDI Protein-lysine N-methyltransferase DD 0.033 13.2 0.0 0.098 11.6 0.0 1.8 2 sp|Q55EX9|Y8948_DICDI Putative methyltransferase DDB_G02689 Domain annotation for each sequence (and alignments): >> sp|Q551M3|TRMB_DICDI tRNA (guanine-N(7)-)-methyltransferase OS=Dictyostelium discoideum OX=44689 GN=mettl1 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 175.4 0.0 5.8e-55 4.9e-52 2 172 .. 56 232 .. 55 233 .. 0.98 Alignments for each domain: == domain 1 score: 175.4 bits; conditional E-value: 5.8e-55 -EEEEEET-TTSHHHHHHHHHSTTSEEEEEES-HHHHHHHHHHHHHC......TTSSEEEEES-CCCHHHHCS-TTSEEEEEEES---- CS Methyltransf_4 2 apvvleiGcGkGeflvalAkknPdknflGiEirvkvvakvlkkieal......elkNlrilrgdalkvllelledgslekifilFPDPw 84 ++ ++++GcG+G++l+ l+ +P+ + +G+E+r kvv++v ++i++l +++N+ ++r++a+k+l++++e+g+l+kif+lFPDP+ sp|Q551M3|TRMB_DICDI 56 KVEIADVGCGYGGLLISLSSLFPERLSVGMELRDKVVQYVEERIDKLrekhvgQFQNISVIRTNAMKYLPNYFEKGQLQKIFFLFPDPH 144 67899************************************************************************************ PP -SGGGGGGSTTSHHHHHHHHHHEEEEEEEEEEESHHHHHHHHHHHHHCSTTEEESSCCCSCCTCHCHHCCCSSTTCCCCCCTTSS-EE CS Methyltransf_4 85 fKkrhhKrRllqpellkelarvLkkgGvlelaTDveeyaeemlkvleeeplferlskeeeleeeplsvlriatkyeqkvqskgkeiye 172 fKk hKrR+++p+ll+e+a++L +g++ ++++Dvee+ +m+++++++plfe+++++ +++++++ + ++t++++kv++ +++++ sp|Q551M3|TRMB_DICDI 145 FKKATHKRRIISPTLLSEYAYILAPGAYAYFISDVEELYLWMFEHFKNHPLFEQVERDIAENDSCIPLIVNSTEEGRKVNRIDGKKWF 232 *********************************************************************************9999885 PP >> tr|Q55EX4|Q55EX4_DICDI Uncharacterized protein OS=Dictyostelium discoideum OX=44689 GN=DDB0189978 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -2.7 0.2 2.9 2.5e+03 135 164 .. 474 505 .. 467 513 .. 0.56 2 ! 85.0 0.0 3.3e-27 2.8e-24 3 139 .. 569 703 .. 567 736 .. 0.90 Alignments for each domain: == domain 1 score: -2.7 bits; conditional E-value: 2.9 TEEESSCCC..SCCTCHCHHCCCSSTTCCCCC CS Methyltransf_4 135 lferlskee..eleeeplsvlriatkyeqkvq 164 lfer++k+e e++++ + l +t+ k++ tr|Q55EX4|Q55EX4_DICDI 474 LFERINKQEinEESDRVRNYLSKMTESRSKIK 505 56666665411344455566666666665554 PP == domain 2 score: 85.0 bits; conditional E-value: 3.3e-27 EEEEEET-TTSHHHHHHHHHSTTSEEEEEES-HHHHHHHHHHHHHCTTSSEEEEES-CCCHHHHCS-TTSEEEEEEES-----SGGG CS Methyltransf_4 3 pvvleiGcGkGeflvalAkknPdknflGiEirvkvvakvlkkiealelkNlrilrgdalkvllelledgslekifilFPDPwfKkrh 89 ++ +ei++G G+++ + A ++ d +++ +Eir +++ ++++k+ + + Nl+i+ gda l+e+++d+ l++++i++P P tr|Q55EX4|Q55EX4_DICDI 569 SLKMEICSGHGHWVTERAGQDLDADWISLEIRYDRIFQIWSKMILEAIDNLYIVGGDAHGSLKEIIPDNILNEVYINYPNPPVWSGA 655 6779*****************************************************************************776655 PP GGGSTTSHHHHHHHHHHEEEEEEEEEEESHHHHHHHHHHHHHCSTTEEES CS Methyltransf_4 90 hKrRllqpellkelarvLkkgGvlelaTDveeyaeemlkvleeeplferl 139 Rl+++ +l e+ r Lkk G l+++TD+++y+ ++++ l + +++ ++ tr|Q55EX4|Q55EX4_DICDI 656 --ERLINELFLIEINRCLKKDGTLTIVTDDKDYSDQIIDILTKSKKLLKI 703 ..89***********************************99988766544 PP >> tr|Q54BE3|Q54BE3_DICDI Uncharacterized protein OS=Dictyostelium discoideum OX=44689 GN=DDB0192083 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 19.1 1.6 5.8e-07 0.00049 4 70 .. 42 108 .. 39 115 .. 0.76 2 ! 7.1 0.3 0.0029 2.5 114 155 .. 136 177 .. 132 187 .. 0.83 Alignments for each domain: == domain 1 score: 19.1 bits; conditional E-value: 5.8e-07 EEEEET-TTSHHHHHHHHHSTTSEEEEEES-HHHHHHHHHHHHHCTTSSEE.EEES-CCCHHHHCS-T CS Methyltransf_4 4 vvleiGcGkGeflvalAkknPdknflGiEirvkvvakvlkkiealelkNlr.ilrgdalkvllelled 70 v+++GcG+G+f ++ +k ++++G++i++k+++k+++ ++++ +N + +++ + l+ ++ d tr|Q54BE3|Q54BE3_DICDI 42 NVIDLGCGNGWFCREMIEKG-VNQIIGVDISEKLIKKAIELNKDNNNNNNNnNNNNNNNEKLKYYVTD 108 589*************8765.6789*************998887755444304444446777777765 PP == domain 2 score: 7.1 bits; conditional E-value: 0.0029 EEEESHHHHHHHHHHHHHCSTTEEESSCCCSCCTCHCHHCCC CS Methyltransf_4 114 elaTDveeyaeemlkvleeeplferlskeeeleeeplsvlri 155 + +D+e y++++ + l+++++ ++++++++++++ ++ ++ tr|Q54BE3|Q54BE3_DICDI 136 HYLSDLESYFKKVYNLLKSNNNNNNINNNNNNNNNNNNNNNN 177 6679******************99999999998887755554 PP >> tr|Q86I59|Q86I59_DICDI Methyltransferase-like protein OS=Dictyostelium discoideum OX=44689 GN=DDB0167391 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -3.5 0.0 5 4.2e+03 31 53 .. 48 70 .. 46 86 .. 0.76 2 ! 17.4 0.8 2e-06 0.0017 2 115 .. 97 209 .. 96 270 .. 0.74 Alignments for each domain: == domain 1 score: -3.5 bits; conditional E-value: 5 EES-HHHHHHHHHHHHHCTTSSE CS Methyltransf_4 31 iEirvkvvakvlkkiealelkNl 53 iE+++k +k ++k +++ +N+ tr|Q86I59|Q86I59_DICDI 48 IEKYEKEADKYWDKFYRKNNSNF 70 67777777777877777777665 PP == domain 2 score: 17.4 bits; conditional E-value: 2e-06 -EEEEEET-TTSHHHHHHHHHSTTSEEEEEES-HHHHHHHHHHHHHC.....TTSSEEEEES-CCCHHHHCS-TTSEEEEEEES--- CS Methyltransf_4 2 apvvleiGcGkGeflvalAkknPdknflGiEirvkvvakvlkkieal.....elkNlrilrgdalkvllelledgslekifilFPDP 83 + + eiGcG G+ ++ l + n + f+ + +++ v+ +++++ ++ ++k + + d l++++e+++++ i i F tr|Q86I59|Q86I59_DICDI 97 QLLAFEIGCGVGNTTIPLLELNDNLHFVSFDFSEHAVKLLNQSVSENpkingRCKGFVYNAIDGPSGLPDYIENDQFDLIIIIFVLS 183 56789******************************************99999999999999999******************99643 PP --SGGGGGGSTTSHHHHHHHHHHEEEEEEEEE CS Methyltransf_4 84 wfKkrhhKrRllqpellkelarvLkkgGvlel 115 + + + p ++++ r+Lk+gG + + tr|Q86I59|Q86I59_DICDI 184 AMDPK------TIPSVVDMCYRTLKPGGKVLI 209 33333......355666666666666666555 PP >> tr|Q54UI9|Q54UI9_DICDI Uncharacterized protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0281053 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 19.5 0.0 4.4e-07 0.00037 4 63 .. 51 109 .. 48 152 .. 0.82 Alignments for each domain: == domain 1 score: 19.5 bits; conditional E-value: 4.4e-07 EEEEET-TTSHHHHHHHHHSTTSEEEEEES-HHHHHHHHHHHHHCTTSSEEEEES-CCCH CS Methyltransf_4 4 vvleiGcGkGeflvalAkknPdknflGiEirvkvvakvlkkiealelkNlrilrgdalkv 63 +l++G G G + + +++ P+ ++++ +i++ +++ ++ +i+ +++kN+ d + tr|Q54UI9|Q54UI9_DICDI 51 KILDVGAGFGVLSIYASTNYPNSEIIATDISKCMIDSLNYSIQGNQIKNVTAKVMDG-QS 109 689***********************************************8777776.33 PP >> tr|Q55GB9|Q55GB9_DICDI Uncharacterized protein OS=Dictyostelium discoideum OX=44689 GN=DDB0202134 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.7 0.0 6.7e-06 0.0057 3 42 .. 45 83 .. 43 92 .. 0.87 2 ? 1.1 0.0 0.2 1.7e+02 99 119 .. 142 174 .. 139 229 .. 0.61 Alignments for each domain: == domain 1 score: 15.7 bits; conditional E-value: 6.7e-06 EEEEEET-TTSHHHHHHHHHSTTSEEEEEES-HHHHHHHH CS Methyltransf_4 3 pvvleiGcGkGeflvalAkknPdknflGiEirvkvvakvl 42 ++++GcG+G+f A k +k++lGi+i++k+++k+ tr|Q55GB9|Q55GB9_DICDI 45 TSIVDLGCGYGWFCR-EAIKMGSKSVLGIDISKKMINKAK 83 6789*******9975.5889999*************9985 PP == domain 2 score: 1.1 bits; conditional E-value: 0.2 HHHHHHHHEEEEEEEEEEES............H CS Methyltransf_4 99 llkelarvLkkgGvlelaTD............v 119 +l ++ + LkkgG l + + tr|Q55GB9|Q55GB9_DICDI 142 FLRKVYSSLKKGGTLLFTVEhpiyscskytnyW 174 788888999999999888774444433333333 PP >> tr|Q54VE3|Q54VE3_DICDI Uncharacterized protein OS=Dictyostelium discoideum OX=44689 GN=DDB0205190 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.3 0.0 2.1e-06 0.0018 3 57 .. 48 101 .. 46 115 .. 0.87 Alignments for each domain: == domain 1 score: 17.3 bits; conditional E-value: 2.1e-06 EEEEEET-TTSHHHHHHHHHSTTSEEEEEES-HHHHHHHHHHHHHCTTSSEEEEE CS Methyltransf_4 3 pvvleiGcGkGeflvalAkknPdknflGiEirvkvvakvlkkiealelkNlrilr 57 vvl++GcG G++++ Ak+ + +G++i+ ++++ ++++++++++ l +++ tr|Q54VE3|Q54VE3_DICDI 48 DVVLDLGCGDGRIVIYAAKHY-GIRGIGLDINPELIKSANENAKKEGVDHLVLFK 101 589**********99888776.6899********************998887765 PP >> tr|Q54C42|Q54C42_DICDI Uncharacterized protein OS=Dictyostelium discoideum OX=44689 GN=DDB0191845 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -3.7 1.9 6.1 5.2e+03 137 166 .. 11 39 .. 2 45 .. 0.53 2 ? -4.4 0.4 9.4 8e+03 151 167 .. 132 148 .. 114 157 .. 0.51 3 ! 17.9 0.0 1.4e-06 0.0012 3 70 .. 429 494 .. 427 499 .. 0.89 Alignments for each domain: == domain 1 score: -3.7 bits; conditional E-value: 6.1 EESSCCCSCCTCHCHHCCCSSTTCCCCCCT CS Methyltransf_4 137 erlskeeeleeeplsvlriatkyeqkvqsk 166 e++++++++ e +++ ++++k+e+k +++ tr|Q54C42|Q54C42_DICDI 11 ENVKSKDNNVE-LTTESKENVKEETKTTNE 39 44444444433.444556666666666554 PP == domain 2 score: -4.4 bits; conditional E-value: 9.4 HHCCCSSTTCCCCCCTT CS Methyltransf_4 151 svlriatkyeqkvqskg 167 ++ r+ kye+k k+ tr|Q54C42|Q54C42_DICDI 132 KSDRMKRKYEEKELDKK 148 22344455555554444 PP == domain 3 score: 17.9 bits; conditional E-value: 1.4e-06 EEEEEET-TTSHHHHHHHHHSTTSEEEEEES-HHHHHHHHHHHHHCTTSSEEEEES-CCCHHHHCS-T CS Methyltransf_4 3 pvvleiGcGkGeflvalAkknPdknflGiEirvkvvakvlkkiealelkNlrilrgdalkvllelled 70 ++l+i+cG G++ ++kk k+++G+Ei+ + v +++++ +++ N ++l g a ++l++ll + tr|Q54C42|Q54C42_DICDI 429 TTLLDICCGTGTIGQCISKK--VKKVIGLEISPDAVIDSINNAKLNKIDNAEYLVGKAEDTLPTLLTK 494 6789*******876666666..6899************************************999887 PP >> tr|Q54UI8|Q54UI8_DICDI Uncharacterized protein OS=Dictyostelium discoideum OX=44689 GN=DDB0203978 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.9 0.1 2.8e-06 0.0023 4 64 .. 52 114 .. 49 135 .. 0.86 Alignments for each domain: == domain 1 score: 16.9 bits; conditional E-value: 2.8e-06 EEEEET-TTSHHHHHHHHHSTTSEEEEEES-HHHHHHHHHHHHHC..TTSSEEEEES-CCCHH CS Methyltransf_4 4 vvleiGcGkGeflvalAkknPdknflGiEirvkvvakvlkkieal..elkNlrilrgdalkvl 64 +l+i G G++++ + ++P+ ++++ + ++ +++ ++ ie++ ++kN++ l d ++++ tr|Q54UI8|Q54UI8_DICDI 52 RILDIAAGVGNLTIPASRQFPNSEIVATDYSKCMIDSLNLIIEQNknNIKNVKTLIVDGQNMV 114 589***********************************9999988789********9997766 PP >> tr|Q54BE2|Q54BE2_DICDI Uncharacterized protein OS=Dictyostelium discoideum OX=44689 GN=DDB0192084 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.2 0.0 9e-06 0.0076 4 48 .. 42 85 .. 39 110 .. 0.79 2 ? -2.7 0.0 3 2.6e+03 116 134 .. 125 143 .. 121 173 .. 0.69 Alignments for each domain: == domain 1 score: 15.2 bits; conditional E-value: 9e-06 EEEEET-TTSHHHHHHHHHSTTSEEEEEES-HHHHHHHHHHHHHC CS Methyltransf_4 4 vvleiGcGkGeflvalAkknPdknflGiEirvkvvakvlkkieal 48 v++ GcG+G+f ++ +k ++++G++i++k+++k+++ +++ tr|Q54BE2|Q54BE2_DICDI 42 NVIDFGCGNGWFCREMIEKG-VNQIIGVDISEKLIKKAIELNKDN 85 589*************8765.6789************99866555 PP == domain 2 score: -2.7 bits; conditional E-value: 3 EESHHHHHHHHHHHHHCST CS Methyltransf_4 116 aTDveeyaeemlkvleeep 134 +D+e +++++ + l++++ tr|Q54BE2|Q54BE2_DICDI 125 LSDLESFFKKVYNLLKSNN 143 5777777777777777663 PP >> sp|Q8T199|OMT3_DICDI O-methyltransferase 3 OS=Dictyostelium discoideum OX=44689 GN=omt3 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -2.9 0.3 3.4 2.9e+03 118 142 .. 52 75 .. 31 99 .. 0.50 2 ! 14.5 0.0 1.6e-05 0.013 2 80 .. 198 277 .. 197 323 .. 0.85 Alignments for each domain: == domain 1 score: -2.9 bits; conditional E-value: 3.4 SHHHHHHHHHHHHHCSTTEEESSCC CS Methyltransf_4 118 Dveeyaeemlkvleeeplferlske 142 D+ + e ++k + e+ + ++ +e sp|Q8T199|OMT3_DICDI 52 DWDSVRESIAKSITEK-ETDIIGEE 75 3444444444444443.22333322 PP == domain 2 score: 14.5 bits; conditional E-value: 1.6e-05 -EEEEEET-TTSHHHHHHHHHSTTSEEEEEES-HHHHHHHHHHHHHCTTSSEEEEES-CCCHHHHC.S-TTSEEEEEEES CS Methyltransf_4 2 apvvleiGcGkGeflvalAkknPdknflGiEirvkvvakvlkkiealelkNlrilrgdalkvllel.ledgslekifilF 80 + +vleiGcG G + l k nP+k f + + + v+ v ++ +e+k + ++ a+++++++ ++d+s++++ + F sp|Q8T199|OMT3_DICDI 198 KLTVLEIGCGTGATVYPLLKLNPEKYFYVFDFSPHAVNLVKSNSLYNEAKLNAFVCDIATEQIPTSiVKDNSIDMMLMIF 277 5689****************************999999888877777666556677777888876516789999999988 PP >> sp|Q54QK7|DIM1_DICDI Probable dimethyladenosine transferase OS=Dictyostelium discoideum OX=44689 GN=dimt1 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 13.9 0.0 2.3e-05 0.02 4 62 .. 58 115 .. 55 123 .. 0.86 Alignments for each domain: == domain 1 score: 13.9 bits; conditional E-value: 2.3e-05 EEEEET-TTSHHHHHHHHHSTTSEEEEEES-HHHHHHHHHHHHHC.TTSSEEEEES-CCC CS Methyltransf_4 4 vvleiGcGkGeflvalAkknPdknflGiEirvkvvakvlkkieal.elkNlrilrgdalk 62 +vleiG G G+++++l ++ k++++iE+ ++ a++ k+++a+ ++ l+i+ gd lk sp|Q54QK7|DIM1_DICDI 58 TVLEIGPGTGNLTMKLLEN--CKKVIAIEVDPRMAAELQKRVAASpYAQHLQIILGDFLK 115 79***********999765..5889******************99777889999888665 PP >> tr|Q54JJ5|Q54JJ5_DICDI Methyltransferase type 11 domain-containing protein OS=Dictyostelium discoideum OX=44689 GN=D # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 13.0 0.0 4.2e-05 0.036 3 44 .. 44 83 .. 42 89 .. 0.87 2 ? -1.9 0.0 1.6 1.4e+03 99 117 .. 120 138 .. 118 162 .. 0.75 Alignments for each domain: == domain 1 score: 13.0 bits; conditional E-value: 4.2e-05 EEEEEET-TTSHHHHHHHHHSTTSEEEEEES-HHHHHHHHHH CS Methyltransf_4 3 pvvleiGcGkGeflvalAkknPdknflGiEirvkvvakvlkk 44 + ++ GcG+G+++v+lAk + k+++G E ++ +++++k+ tr|Q54JJ5|Q54JJ5_DICDI 44 DLAIDCGCGSGQATVKLAKYF--KKVIGFEPSQGQIENAVKT 83 5789***************98..6789999999999998875 PP == domain 2 score: -1.9 bits; conditional E-value: 1.6 HHHHHHHHEEEEEEEEEEE CS Methyltransf_4 99 llkelarvLkkgGvlelaT 117 + +e++r L+ +G+l l T tr|Q54JJ5|Q54JJ5_DICDI 120 FYQEAKRLLRDNGSLILFT 138 6788889999999887766 PP >> tr|Q54Y42|Q54Y42_DICDI Protein-lysine N-methyltransferase DDB0205448 OS=Dictyostelium discoideum OX=44689 GN=DDB0205 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.5 0.0 0.00027 0.23 4 71 .. 67 134 .. 64 146 .. 0.77 2 ? 1.6 0.0 0.14 1.2e+02 101 141 .. 159 197 .. 150 201 .. 0.84 Alignments for each domain: == domain 1 score: 10.5 bits; conditional E-value: 0.00027 EEEEET-TTSHHHHHHHHHSTTSEEEEEES-HHHHHHHHHHHHHCTTSSEEEEES-C.CCHHHHCS-TT CS Methyltransf_4 4 vvleiGcGkGeflvalAkknPdknflGiEirvkvvakvlkkiealelkNlrilrgda.lkvllelledg 71 ++++GcG+G l++l+k +k + G + + k+++ + + +e+++++ ++++ d +++++ d+ tr|Q54Y42|Q54Y42_DICDI 67 KIIDLGCGNGMTLIELSKLGFKK-LDGSDYSDKGIELAKRIMEQEGFNHINYFVDDItDSKIEQYVYDA 134 689**************987654.569999999999999999999999999988888323455555555 PP == domain 2 score: 1.6 bits; conditional E-value: 0.14 HHHHHHEEEEEEEEEEESHHHHHHHHHHHHHCSTTEEESSC CS Methyltransf_4 101 kelarvLkkgGvlelaTDveeyaeemlkvleeeplferlsk 141 ++++++Lk+ G++++ + +y+e+ lk + p+fe++++ tr|Q54Y42|Q54Y42_DICDI 159 QHVEHILKPDGIFVITS--CNYTENELKLYYTSPQFEFIKN 197 67888999999988876..79***************99876 PP >> sp|Q55EX9|Y8948_DICDI Putative methyltransferase DDB_G0268948 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0268948 P # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.6 0.0 0.00012 0.098 3 43 .. 46 84 .. 44 97 .. 0.85 2 ? -1.8 0.0 1.6 1.4e+03 99 139 .. 122 163 .. 119 193 .. 0.59 Alignments for each domain: == domain 1 score: 11.6 bits; conditional E-value: 0.00012 EEEEEET-TTSHHHHHHHHHSTTSEEEEEES-HHHHHHHHH CS Methyltransf_4 3 pvvleiGcGkGeflvalAkknPdknflGiEirvkvvakvlk 43 + ++iG G+G+++v+lAk + k+++G E ++ ++++ k sp|Q55EX9|Y8948_DICDI 46 DLAIDIGAGSGQATVRLAKYF--KKVIGFEPSQGQIENAEK 84 5789***************98..678999998888888765 PP == domain 2 score: -1.8 bits; conditional E-value: 1.6 HHHHHHHHEEEEEEEEEEES.HHHHHHH.HHHHHHCSTTEEES CS Methyltransf_4 99 llkelarvLkkgGvlelaTD.veeyaee.mlkvleeeplferl 139 + +e +r L+++G+l + + + + +++ ++v++e+ +e + sp|Q55EX9|Y8948_DICDI 122 FYEESKRLLRENGSLIIWSYgLMKITNNnDAQVVHEKHYYE-T 163 56777888888888877665533333330333333333333.3 PP Internal pipeline statistics summary: ------------------------------------- Query model(s): 1 (173 nodes) Target sequences: 12739 (6856946 residues searched) Passed MSV filter: 1276 (0.100165); expected 254.8 (0.02) Passed bias filter: 248 (0.0194678); expected 254.8 (0.02) Passed Vit filter: 35 (0.00274747); expected 12.7 (0.001) Passed Fwd filter: 15 (0.00117749); expected 0.1 (1e-05) Initial search space (Z): 12739 [actual number of targets] Domain search space (domZ): 15 [number of targets reported over threshold] # CPU time: 0.14u 0.01s 00:00:00.15 Elapsed: 00:00:00.06 # Mc/sec: 19770.86 // [ok]