# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/Methyltransf_4.hmm.txt
# target sequence database: proteomes/Natronomonas_moolapensis.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: Methyltransf_4 [M=173]
Accession: PF02390.16
Description: Putative methyltransferase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
0.00085 16.2 0.0 0.0011 15.7 0.0 1.3 1 tr|M1Y4D2|M1Y4D2_NATM8 Probable S-adenosylmethionine-depende
------ inclusion threshold ------
0.022 11.5 0.0 0.057 10.2 0.0 1.7 2 tr|M1XL08|M1XL08_NATM8 Probable arsenite(III)-methyltransfer
0.036 10.9 0.0 0.058 10.2 0.0 1.2 1 tr|M1Y5Q2|M1Y5Q2_NATM8 Probable cobalt-precorrin-6B C(15)-me
Domain annotation for each sequence (and alignments):
>> tr|M1Y4D2|M1Y4D2_NATM8 Probable S-adenosylmethionine-dependent methyltransferase OS=Natronomonas moolapensis (strain
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 15.7 0.0 1.3e-06 0.0011 4 60 .. 47 102 .. 44 150 .. 0.82
Alignments for each domain:
== domain 1 score: 15.7 bits; conditional E-value: 1.3e-06
EEEEET-TTSHHHHHHHHHSTTSEEEEEES-HHHHHHHHHHHHHCTTS.SEEEEES-C CS
Methyltransf_4 4 vvleiGcGkGeflvalAkknPdknflGiEirvkvvakvlkkiealelk.Nlrilrgda 60
+le+ cG G+f+v lA + +d ++G++i++ ++++ +k++ ++ l ++gda
tr|M1Y4D2|M1Y4D2_NATM8 47 RILEVACGTGRFTVMLADRGAD--IVGMDISEAMLEQGRRKARSAGVDeSLSFIQGDA 102
689***************9987..79***********999999998852588888888 PP
>> tr|M1XL08|M1XL08_NATM8 Probable arsenite(III)-methyltransferase OS=Natronomonas moolapensis (strain DSM 18674 / JCM
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 10.2 0.0 6.3e-05 0.057 4 64 .. 98 158 .. 95 170 .. 0.85
2 ? -2.8 0.0 0.64 5.8e+02 97 115 .. 181 199 .. 180 204 .. 0.79
Alignments for each domain:
== domain 1 score: 10.2 bits; conditional E-value: 6.3e-05
EEEEET-TTSHHHHHHHHHSTTS.EEEEEES-HHHHHHHHHHHHHCTTSSEEEEES-CCCHH CS
Methyltransf_4 4 vvleiGcGkGeflvalAkknPdk.nflGiEirvkvvakvlkkiealelkNlrilrgdalkvl 64
vl++G+G G A++ ++ ++G+++ ++++k+ +++ +++++N++ g+ ++l
tr|M1XL08|M1XL08_NATM8 98 AVLDLGSGAGFDCFLAAQEVGETgRVIGVDMTPEMIKKARANASQNGAENVEFRLGEI-EHL 158
689*******8888888888776479*************************9888875.555 PP
== domain 2 score: -2.8 bits; conditional E-value: 0.64
HHHHHHHHHHEEEEEEEEE CS
Methyltransf_4 97 pellkelarvLkkgGvlel 115
p++ +e+ rvL++gG l +
tr|M1XL08|M1XL08_NATM8 181 PQVFDEAFRVLRPGGRLAI 199
567788899******9865 PP
>> tr|M1Y5Q2|M1Y5Q2_NATM8 Probable cobalt-precorrin-6B C(15)-methyltransferase (decarboxylating) OS=Natronomonas moolap
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 10.2 0.0 6.4e-05 0.058 4 66 .. 34 94 .. 32 99 .. 0.92
Alignments for each domain:
== domain 1 score: 10.2 bits; conditional E-value: 6.4e-05
EEEEET-TTSHHHHHHHHHSTTSEEEEEES-HHHHHHHHHHHHHCTTSSEEEEES-CCCHHHH CS
Methyltransf_4 4 vvleiGcGkGeflvalAkknPdknflGiEirvkvvakvlkkiealelkNlrilrgdalkvlle 66
++e+G+ G ++++ A + +iE + +++++ k+ +a++++ +++++g+a + l++
tr|M1Y5Q2|M1Y5Q2_NATM8 34 HFVEVGSCTGAVTIEAARLAGRV--TAIERKPERLEATRKNLAANGIEGVELIEGEAPEALPD 94
589*************9998765..589*****************************999976 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (173 nodes)
Target sequences: 2723 (809592 residues searched)
Passed MSV filter: 55 (0.0201983); expected 54.5 (0.02)
Passed bias filter: 51 (0.0187293); expected 54.5 (0.02)
Passed Vit filter: 16 (0.00587587); expected 2.7 (0.001)
Passed Fwd filter: 3 (0.00110173); expected 0.0 (1e-05)
Initial search space (Z): 2723 [actual number of targets]
Domain search space (domZ): 3 [number of targets reported over threshold]
# CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.01
# Mc/sec: 14005.94
//
[ok]