# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/Methyltransf_5.hmm.txt
# target sequence database: proteomes/Ciona_savignyi.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: Methyltransf_5 [M=309]
Accession: PF01795.18
Description: MraW methylase family
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.8e-23 82.3 0.1 3.2e-23 82.1 0.1 1.0 1 tr|H2Z4D7|H2Z4D7_CIOSA Uncharacterized protein OS=Ciona savi
------ inclusion threshold ------
0.051 12.5 0.0 0.087 11.7 0.0 1.3 1 tr|H2ZN24|H2ZN24_CIOSA Uncharacterized protein OS=Ciona savi
Domain annotation for each sequence (and alignments):
>> tr|H2Z4D7|H2Z4D7_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 82.1 0.1 5.5e-27 3.2e-23 207 308 .. 2 107 .. 1 108 [. 0.83
Alignments for each domain:
== domain 1 score: 82.1 bits; conditional E-value: 5.5e-27
HHHHHHHTHHHHHHHHHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTT------------------......-EEEEE.E.E-- CS
Methyltransf_5 207 AlRIavNdEleeleelleaalellakggrlavisFhSledrivkkvfkeaskkeevPaglpvaseelka......klklitkkpilp 287
A+RI+vNdE++e+++++++a + l +gg++av++FhSledr+vk++f++ + P ++ + ++ + k k +lp
tr|H2Z4D7|H2Z4D7_CIOSA 2 AIRIFVNDEMNEIHHAVRTAEKYLIHGGKMAVLTFHSLEDRLVKRLFQQIDL--SKPFNMRLSETRSYKgkqtgtKKWNCHKSLLLP 86
9***********************************************9998..45666666665554422333233345556789* PP
-HHHHHH-GGGTT-EEEEEEE CS
Methyltransf_5 288 seeeikeNprsrsakLrviek 308
s ee+++N++srsakLr++ +
tr|H2Z4D7|H2Z4D7_CIOSA 87 SGEEVESNAKSRSAKLRIATR 107
******************976 PP
>> tr|H2ZN24|H2ZN24_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.7 0.0 1.5e-05 0.087 22 86 .. 100 164 .. 80 170 .. 0.80
Alignments for each domain:
== domain 1 score: 11.7 bits; conditional E-value: 1.5e-05
-EEEES--TTSHHHHHHHTT--TTEEEEEES-HHHHHHHTT.....-..--EEEEES-GGGHHHHHH CS
Methyltransf_5 22 gvyiDaTlGaggHsealLeqlselrligidrDksalarakerLkefe..krltlvkgnfkelkeala 86
+ +Da G+gg s ++ +++ +r+i+id+D+ l++a+++ + + +r++++ g+f +l+ +l+
tr|H2ZN24|H2ZN24_CIOSA 100 DIIVDAFCGSGGNSIQF--AFTCERVIAIDIDPVKLENARHNAAIYGveDRIEFICGSFFDLAPTLK 164
5789********99887..67889****************98777653388******9988887766 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (309 nodes)
Target sequences: 11592 (4231397 residues searched)
Passed MSV filter: 393 (0.0339027); expected 231.8 (0.02)
Passed bias filter: 219 (0.0188923); expected 231.8 (0.02)
Passed Vit filter: 19 (0.00163906); expected 11.6 (0.001)
Passed Fwd filter: 2 (0.000172533); expected 0.1 (1e-05)
Initial search space (Z): 11592 [actual number of targets]
Domain search space (domZ): 2 [number of targets reported over threshold]
# CPU time: 0.09u 0.00s 00:00:00.09 Elapsed: 00:00:00.04
# Mc/sec: 32687.54
//
[ok]