# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/Methyltransf_5.hmm.txt
# target sequence database: proteomes/Strongylocentrotus_purpuratus.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: Methyltransf_5 [M=309]
Accession: PF01795.18
Description: MraW methylase family
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.5e-46 160.0 0.8 1.8e-46 159.7 0.8 1.0 1 tr|W4XVH1|W4XVH1_STRPU Uncharacterized protein OS=Strongyloc
8e-36 124.8 0.0 9.7e-36 124.5 0.0 1.1 1 tr|W4XVH0|W4XVH0_STRPU Uncharacterized protein OS=Strongyloc
0.0008 19.7 0.0 0.78 9.8 0.0 2.2 2 tr|W4ZC76|W4ZC76_STRPU Uncharacterized protein OS=Strongyloc
0.0067 16.6 0.0 7.1 6.7 0.0 3.0 4 tr|W4Y7A2|W4Y7A2_STRPU Uncharacterized protein OS=Strongyloc
------ inclusion threshold ------
0.23 11.6 0.0 0.44 10.7 0.0 1.4 1 tr|W4XJA0|W4XJA0_STRPU Uncharacterized protein OS=Strongyloc
Domain annotation for each sequence (and alignments):
>> tr|W4XVH1|W4XVH1_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 159.7 0.8 3.1e-50 1.8e-46 131 307 .. 13 201 .. 10 203 .] 0.89
Alignments for each domain:
== domain 1 score: 159.7 bits; conditional E-value: 3.1e-50
S--HHHHHHH--HHHHHHHHHHHH--TTHHHHHHHHHHHHHH.S---BHHHHHHHHHHHS-------.........-TTHHHHHHHH CS
Methyltransf_5 131 eltAaevlnrlseeeLakilkeygeekfakriakaivekrkk.kpiettkelaevikkvvpakekrk.......kihpatrvFQAlR 209
+ tAa+v+n+l++ L++il++ygee ak+ia+ai ++r++ + +++t+ela vi+ + + ++ + h at++FQAlR
tr|W4XVH1|W4XVH1_STRPU 13 QPTAADVVNSLDHVTLTQILRTYGEESNAKKIAQAIIDYRTNfNTFSSTSELATVIACCHTHRDAKSnrdklgrHAHTATKTFQALR 99
459***********************************8876489***********99877766655778898899*********** PP
HHHHTHHHHHHHHHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHH..T.T-----.--------------EEEEE.E.E---HHHH CS
Methyltransf_5 210 IavNdEleeleelleaalellakggrlavisFhSledrivkkvfke..a.skkeev.Paglpvaseelkaklklitkkpilpseeei 292
I+vN+El+el ++eaa +l+++gg+lav++FhSledr+vk+ ++ ++ +++ +++ +++ +k +++ + + + +eei
tr|W4XVH1|W4XVH1_STRPU 100 IFVNNELNELAVAVEAAWDLMRPGGKLAVLTFHSLEDRVVKRSLQGrhVaERGTSLrQKRVESHKDNGAQKWEVVKRNELCADDEEI 186
******************************************9975113134445567889999999999***************** PP
HH-GGGTT-EEEEEE CS
Methyltransf_5 293 keNprsrsakLrvie 307
++Npr+rsakLr +
tr|W4XVH1|W4XVH1_STRPU 187 NMNPRARSAKLRTAI 201
************875 PP
>> tr|W4XVH0|W4XVH0_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 124.5 0.0 1.7e-39 9.7e-36 2 129 .. 59 186 .. 58 187 .] 0.97
Alignments for each domain:
== domain 1 score: 124.5 bits; conditional E-value: 1.7e-39
XXX--TTTHHHHHHT---TT-EEEES--TTSHHHHHHHTT--TTEEEEEES-HHHHHHHTT.....---EEEEES-GGGHHHHHHHT CS
Methyltransf_5 2 leHvpVLlqevvellepkedgvyiDaTlGaggHsealLeqlselrligidrDksalarakerLkefekrltlvkgnfkelkealaea 88
+ H+pV+++ev+++++p++++vyiD+T+G+ggH++al++ + +++g+drD+ a ++a++ +++ +l + g+f+e+k+ l+++
tr|W4XVH0|W4XVH0_STRPU 59 SLHKPVMVEEVLSFFAPQANQVYIDMTFGGGGHTQALMKCAPGITVYGLDRDPFAHQIAQKLSLHHKGQLCPLLGKFSEVKDLLSQR 145
57***********************************************************88888999****************** PP
TTT-EEEEEEE-S--HHHHH-GGG---SSS--BS---S-TT CS
Methyltransf_5 89 nvtkvdgillDLGvSslqldkaerGFsfaedapLDmRmdqs 129
+v+ vdgil+D G Ss+q+d++erGF+ +d+pLDmRmd +
tr|W4XVH0|W4XVH0_STRPU 146 EVSMVDGILIDAGCSSFQFDSPERGFALSQDGPLDMRMDAN 186
**************************************976 PP
>> tr|W4ZC76|W4ZC76_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 9.8 0.0 0.00014 0.78 82 117 .. 47 82 .. 39 98 .. 0.85
2 ! 7.5 0.0 0.00071 4.1 93 116 .. 110 133 .. 94 139 .. 0.89
Alignments for each domain:
== domain 1 score: 9.8 bits; conditional E-value: 0.00014
HHHHHHTTTT-EEEEEEE-S--HHHHH-GGG---SS CS
Methyltransf_5 82 kealaeanvtkvdgillDLGvSslqldkaerGFsfa 117
+e +++ + + +d++l+ LGv +++++k+++G+ +
tr|W4ZC76|W4ZC76_STRPU 47 AERYQHLKENCCDFLLIQLGVCIFKYEKQKKGYGYV 82
566677777789*********************994 PP
== domain 2 score: 7.5 bits; conditional E-value: 0.00071
EEEEEEE-S--HHHHH-GGG---S CS
Methyltransf_5 93 vdgillDLGvSslqldkaerGFsf 116
+d++l+ LGv +++++k+++G+ +
tr|W4ZC76|W4ZC76_STRPU 110 CDFLLIQLGVCIFKYEKQKKGYGY 133
799*******************99 PP
>> tr|W4Y7A2|W4Y7A2_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 6.1 0.0 0.0018 11 23 67 .. 110 154 .. 88 173 .. 0.83
2 ? -2.9 0.0 1 5.9e+03 223 241 .. 196 214 .. 193 215 .. 0.85
3 ! 6.7 0.0 0.0012 7.1 14 67 .. 264 318 .. 259 337 .. 0.82
4 ? -2.9 0.0 1 5.9e+03 223 241 .. 360 378 .. 357 379 .. 0.85
Alignments for each domain:
== domain 1 score: 6.1 bits; conditional E-value: 0.0018
EEEES--TTSHHHHHHHTT--TTEEEEEES-HHHHHHHTT..... CS
Methyltransf_5 23 vyiDaTlGaggHsealLeqlselrligidrDksalarakerLkef 67
+D+ Gag ++ l ++++e +++g+d+ +s++++a++ ++
tr|W4Y7A2|W4Y7A2_STRPU 110 RMLDVGCGAGLATQILAKKFPESHFVGVDIAQSMVDEANAEATRL 154
5789999***9999999*********************9876655 PP
== domain 2 score: -2.9 bits; conditional E-value: 1
HHHHHHHEEEEEEEEEEES CS
Methyltransf_5 223 leaalellakggrlavisF 241
++ + ++++k+g l++i F
tr|W4Y7A2|W4Y7A2_STRPU 196 IDDVKRVMKKDGTLSIIEF 214
66777899*********99 PP
== domain 3 score: 6.7 bits; conditional E-value: 0.0012
HHT---TT-E.EEES--TTSHHHHHHHTT--TTEEEEEES-HHHHHHHTT..... CS
Methyltransf_5 14 ellepkedgv.yiDaTlGaggHsealLeqlselrligidrDksalarakerLkef 67
++l++ke g+ +D+ Gag ++ l ++++e +++g+d+ +s++++a++ ++
tr|W4Y7A2|W4Y7A2_STRPU 264 DFLKEKEMGIrVLDVGCGAGLATQILAKKFPESHFVGVDIAQSIVDEANAEATRL 318
5677777766367***********************************9876655 PP
== domain 4 score: -2.9 bits; conditional E-value: 1
HHHHHHHEEEEEEEEEEES CS
Methyltransf_5 223 leaalellakggrlavisF 241
++ + ++++k+g l++i F
tr|W4Y7A2|W4Y7A2_STRPU 360 IDDVKRVMKKDGTLSIIEF 378
66777899*********99 PP
>> tr|W4XJA0|W4XJA0_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 10.7 0.0 7.6e-05 0.44 19 62 .. 233 276 .. 218 309 .. 0.80
Alignments for each domain:
== domain 1 score: 10.7 bits; conditional E-value: 7.6e-05
-TT-EEEES--TTSHHHHHHHTT--TTEEEEEES-HHHHHHHTT CS
Methyltransf_5 19 kedgvyiDaTlGaggHsealLeqlselrligidrDksalarake 62
+++ + +D+ G+gg s + +q+++ r+igid+ + a+++ak
tr|W4XJA0|W4XJA0_STRPU 233 ESGITVLDVGCGEGGASILMAKQYPNSRFIGIDICSYAIQQAKG 276
4567789***********************************97 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (309 nodes)
Target sequences: 28594 (14266044 residues searched)
Passed MSV filter: 886 (0.0309855); expected 571.9 (0.02)
Passed bias filter: 478 (0.0167168); expected 571.9 (0.02)
Passed Vit filter: 56 (0.00195845); expected 28.6 (0.001)
Passed Fwd filter: 5 (0.000174862); expected 0.3 (1e-05)
Initial search space (Z): 28594 [actual number of targets]
Domain search space (domZ): 5 [number of targets reported over threshold]
# CPU time: 0.29u 0.01s 00:00:00.30 Elapsed: 00:00:00.11
# Mc/sec: 40074.61
//
[ok]