# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/Pox_MCEL.hmm.txt
# target sequence database: proteomes/Ciona_savignyi.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: Pox_MCEL [M=333]
Accession: PF03291.15
Description: mRNA capping enzyme
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.6e-74 249.2 5.0 4.5e-74 248.9 5.0 1.0 1 tr|H2YL80|H2YL80_CIOSA Uncharacterized protein OS=Ciona savi
0.00058 18.4 0.2 0.00094 17.8 0.2 1.3 1 tr|H2Z6S3|H2Z6S3_CIOSA Uncharacterized protein OS=Ciona savi
0.00084 17.9 0.1 0.0011 17.5 0.1 1.2 1 tr|H2YNF4|H2YNF4_CIOSA Protein-lysine N-methyltransferase OS
Domain annotation for each sequence (and alignments):
>> tr|H2YL80|H2YL80_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 248.9 5.0 1.2e-77 4.5e-74 5 258 .. 25 267 .. 21 269 .. 0.92
Alignments for each domain:
== domain 1 score: 248.9 bits; conditional E-value: 1.2e-77
Pox_MCEL 5 etesevtdlvathynerpetgellkkRiastiiylrnlnNyiKslLiseyasktkldesnklkvLdldcgkGgDLeKyekgeIsklv 91
+ s +++ va+hyn+r +t+ ++R +s+i+y+rn+nN+ Ks+Li++y+ +++ n+ vLdl+cgkGgD+ K++k++ ++l+
tr|H2YL80|H2YL80_CIOSA 25 VKRSSNAEKVAEHYNKRGNTS--CAERRQSKIFYMRNFNNWTKSVLIKKYVDALNKRGVNHPVVLDLGCGKGGDILKWDKARPNHLI 109
456778899**********99..9*************************************************************** PP
Pox_MCEL 92 atDiaeesieeckeRYnklrsekkskyykFdaelirsdsfvssvrevfedyelkfdivslQFaiHYsFeseekartvlrNvaellas 178
+tD ae+s+ +ck RY l++++++k F++e+i +ds +++++e+++d+++k di s+QF+iHYsFesee+a ++++N++++l++
tr|H2YL80|H2YL80_CIOSA 110 CTDLAETSVSQCKDRYALLKKRHRNK-QIFTTEFIVADSSKENLNEKVQDKQMKYDITSCQFVIHYSFESEEQATMMVHNACASLNK 195
****************6666665554.67********************************************************** PP
Pox_MCEL 179 GGkvlgTtpdgdelskltvkklkviekdlpsfgNsiyvvkfeeekievplfGakYeynledvvkdvpEyivkfealvkla 258
G +++gTt+++d++ v + d sfgN ++ v+fe +k+ p f +kY ++l dvv ++pE+++k+e+lv+ a
tr|H2YL80|H2YL80_CIOSA 196 GRYFFGTTVNADKMID------LVGNTDDLSFGNTVFDVTFE-SKDLFPDFSCKYIFQLHDVV-NCPEFLLKKETLVRYA 267
**************22......233457899***********.778889**************.************9976 PP
>> tr|H2Z6S3|H2Z6S3_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 17.8 0.2 2.4e-07 0.00094 61 200 .. 40 174 .. 28 196 .. 0.68
Alignments for each domain:
== domain 1 score: 17.8 bits; conditional E-value: 2.4e-07
Pox_MCEL 61 desnklkvLdldcgkGg...DLeKyekgeIsklvatDiaeesieeckeRYnklrsekkskyykFda..elirsdsfvssvrevfedy 142
++ ++ k+L l+cg+ DL K + + +D + + ie+ k++Y++l ++ d + + +f + +++ d
tr|H2Z6S3|H2Z6S3_CIOSA 40 HMDKNDKILILGCGNSPfslDLYKDGYKN---VTNVDYSTVCIENMKQKYQNLSEMSWY---VMDItnLQFEASTFDVVIDKGTLD- 119
44567789999****86333666666655...5579**************666555433...344332556666666666665544. PP
Pox_MCEL 143 elkfdivslQFaiHYsFeseekartvlrNvaellasGGkvlgTtpdgdelskltvkkl 200
+l ++ ++ +Fe++e + lrNv+ +l+ GG+++ t + +k++ ++
tr|H2Z6S3|H2Z6S3_CIOSA 120 ALLVEENDVWNISETAFETMEAV---LRNVSTVLKVGGRFVSITFSQPHFRKKILARS 174
44444444444556689998877...**************987777777766655333 PP
>> tr|H2YNF4|H2YNF4_CIOSA Protein-lysine N-methyltransferase OS=Ciona savignyi OX=51511 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 17.5 0.1 3e-07 0.0011 53 186 .. 49 191 .. 45 212 .. 0.72
Alignments for each domain:
== domain 1 score: 17.5 bits; conditional E-value: 3e-07
Pox_MCEL 53 eyasktkldesnklkvLdldcgkGgDLeKyekgeIsklvatDiaeesieeckeRYnklrsekkskyykFda....elirsdsfv.ss 134
+++sk ++ +++ ++Ld++cg+G L k + ++lv++D + +++ ++ ++k + e+ + + d + +++ ++
tr|H2YNF4|H2YNF4_CIOSA 49 KWISKCSD-IKEDSRILDVGCGNGLMLLALAKLGYKNLVGIDYCQSALDLASAVFRKENFENVCNWIQMDLtsqtLIWDKNCYGcVT 134
56677666.778899*************************************99988888887776666665543344566775256 PP
Pox_MCEL 135 vrevfed.yelkfdiv...slQFaiHYsFeseekar.tvlrNvaellasGGkvlgTt 186
v++++e +++ fd++ + ai e +kar ++N+a++++ +++T
tr|H2YNF4|H2YNF4_CIOSA 135 VSDLLETeKQVVFDVCldkGTYDAISLNPENSKKARqSYIENMARIMNHSSIFVITS 191
777776446778888832212334444445555665235677777777777777775 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (333 nodes)
Target sequences: 11592 (4231397 residues searched)
Passed MSV filter: 568 (0.0489993); expected 231.8 (0.02)
Passed bias filter: 248 (0.0213941); expected 231.8 (0.02)
Passed Vit filter: 21 (0.00181159); expected 11.6 (0.001)
Passed Fwd filter: 3 (0.000258799); expected 0.1 (1e-05)
Initial search space (Z): 11592 [actual number of targets]
Domain search space (domZ): 3 [number of targets reported over threshold]
# CPU time: 0.12u 0.00s 00:00:00.12 Elapsed: 00:00:00.04
# Mc/sec: 35226.38
//
[ok]