# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/Pox_MCEL.hmm.txt
# target sequence database: proteomes/Dictyostelium_discoideum.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: Pox_MCEL [M=333]
Accession: PF03291.15
Description: mRNA capping enzyme
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.8e-71 239.4 12.2 6.6e-69 232.1 12.2 2.5 1 tr|Q54Y13|Q54Y13_DICDI mRNA cap guanine-N7 methyltransferase
4.5e-24 84.7 7.7 1.6e-22 79.6 7.7 2.3 1 tr|Q54IL6|Q54IL6_DICDI Uncharacterized protein OS=Dictyostel
0.0003 19.5 0.0 0.054 12.1 0.0 2.3 2 tr|Q54LU3|Q54LU3_DICDI Uncharacterized protein OS=Dictyostel
Domain annotation for each sequence (and alignments):
>> tr|Q54Y13|Q54Y13_DICDI mRNA cap guanine-N7 methyltransferase OS=Dictyostelium discoideum OX=44689 GN=DDB0205479 PE=3
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 232.1 12.2 1.5e-72 6.6e-69 9 332 .. 106 438 .. 98 439 .. 0.95
Alignments for each domain:
== domain 1 score: 232.1 bits; conditional E-value: 1.5e-72
Pox_MCEL 9 evtdlvathynerpetgellkkRiastiiylrnlnNyiKslLiseyasktkldesnklkvLdldcgkGgDLeKyekgeIsklvatDi 95
+ +++v++hy ++++t ++ R +s+ii l+n+nN++Ks+Li+ey ++++ v d++ gk gDL+K+ k++I++l+ Di
tr|Q54Y13|Q54Y13_DICDI 106 KQNEIVSSHYDNKQNTP--IHIRAQSKIISLKNINNWVKSMLIQEYSKPNTI-------VFDICGGKLGDLQKWIKAQIKSLIVSDI 183
5689***********88..9*****************************999.......**************************** PP
Pox_MCEL 96 aeesieeckeRYnklrsekkskyykFdaelirsdsfvssvrevfed......................................... 141
+ es++++ eRY ++k +y +F+ ++i+ d+f+s++ +vf +
tr|Q54Y13|Q54Y13_DICDI 184 SLESLKHGLERY-----NQKLNYIHFNITMIAVDCFSSKLLDVFPKqpssnklknkkkkinnnnneednsseseneqededddddye 265
************.....77888999*******************7799*************************************99 PP
Pox_MCEL 142 ..yelkfdivslQFaiHYsFeseekartvlrNvaellasGGkvlgTtpdgdelskltvkklkviekdlpsfgNsiyvvkfeeekiev 226
lk+++vs+QFa+HYsF +ee ar +l+Nv+ +l+ GG+++gT+p++ ++ vkkl++++ ++fgN++++++f+e++++
tr|Q54Y13|Q54Y13_DICDI 266 neELLKVNLVSCQFALHYSFRTEESARSLLKNVSSVLEDGGHFIGTIPNSCLI----VKKLRESK--SNKFGNEVFKIEFKEKEPNF 346
98889**********************************************99....*****996..899***************** PP
Pox_MCEL 227 plfGakYeynledvvkdvpEyivkfealvklaeeYgleLvdkkdfaeiieesikke.lkklikrvskleerkstknfeelnrsalks 312
++fG+ Y++ led+++ + Ey+v+ ++l +la++Y+le+v++++f+++i e+ k++ + l+++++ ++++n +
tr|Q54Y13|Q54Y13_DICDI 347 SAFGCAYNFFLEDAIDFLEEYLVHIDVLIELARDYQLEIVSHSNFHNLIYEKSKSKpSHDLLRKMN----------CFNSN-----N 418
***********************************************9888866666888888887..........55554.....4 PP
Pox_MCEL 313 tlgkdeeealsyYlvfvfeK 332
t+++ e++al +Y +fvf+K
tr|Q54Y13|Q54Y13_DICDI 419 TISQAEWDALGIYKTFVFKK 438
67779**************9 PP
>> tr|Q54IL6|Q54IL6_DICDI Uncharacterized protein OS=Dictyostelium discoideum OX=44689 GN=DDB0188046 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 79.6 7.7 3.7e-26 1.6e-22 35 289 .. 9 283 .. 5 312 .. 0.87
Alignments for each domain:
== domain 1 score: 79.6 bits; conditional E-value: 3.7e-26
Pox_MCEL 35 tiiylrnlnNyiKslLiseyasktkldesnklkvLdldcgkGgDLeKyekgeIsklvatDiaeesieeckeRYnklrsekkskyykF 121
+ +++ + ++K++Li e ++++++ ++ G D K+e ++I+++ + ++ e+k+++ + +++ F
tr|Q54IL6|Q54IL6_DICDI 9 SVWQFKAYQAWVKTILITELVEENDT-------AAEIYSAIGLDTGKWERAKIKRYYCFESSKSNATESKNKW---QAKNEP----F 81
5667888999************9999.......4566667788888***************999999999998...333333....8 PP
Pox_MCEL 122 daelirsdsfvssvrevfed.......................................yelkfdivslQFaiHYsFeseekartvl 169
+a +i+ d + +++ +++ + +fd++ + + sF+ +a+ +
tr|Q54IL6|Q54IL6_DICDI 82 EADFITMDLNKDNIESFLQPipnnnnninnninnninnstnnninnnnnnnnnnninisKLPQFDVIACFDGLQNSFTDPTQAEQFI 168
8899999999888888888888889999***************************99977789************************ PP
Pox_MCEL 170 rNvaellasGGkvlgTtpdgdelskltvkklkviekdlpsfgNsiyvvkfeeekievplfGakYeynledvvkdvpEyivkfealvk 256
+N++ +l+ GG+++g +pd+ l ++ +k++ + +lp + +++ ++f++e ++ fG+kY+ + ++ E +v+f+ + +
tr|Q54IL6|Q54IL6_DICDI 169 KNASSRLKVGGFFFGMMPDSSALWYKAQKETSSS--GLPIIKSNLFNITFDSEIQS--FFGCKYNLTIPTEL-NLSENLVHFPSFLN 250
***********************99999999998..6**************66554..6***********99.************** PP
Pox_MCEL 257 laeeYgleLvdkkdfaeiieesikkelkklikr 289
l+++Y+l Lv+ + +e+++e+ k++ +kl ++
tr|Q54IL6|Q54IL6_DICDI 251 LCKKYNLTLVEATNLSEFYDENKKNYESKLKQS 283
**********************88877777543 PP
>> tr|Q54LU3|Q54LU3_DICDI Uncharacterized protein OS=Dictyostelium discoideum OX=44689 GN=DDB0186961 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 12.1 0.0 1.3e-05 0.054 66 129 .. 79 153 .. 67 163 .. 0.73
2 ! 5.1 0.0 0.0017 7.4 166 209 .. 163 203 .. 157 212 .. 0.84
Alignments for each domain:
== domain 1 score: 12.1 bits; conditional E-value: 1.3e-05
Pox_MCEL 66 lkvLdldcgkGgDLeKyekg..eIsklvatDiaeesieeckeRY.........nklrsekkskyykFdaelirsd 129
kv+d +cg G DL + e + v++Di+ e +e++k R s++ + + Fda +ir++
tr|Q54LU3|Q54LU3_DICDI 79 QKVMDCGCGAGKDLGRLESMveGNGIVVGMDISREMVECAKSRMshlpnvkifIGDASRIPIDDNYFDAYVIRCE 153
68************99986422566799***************96555554443344555555556666666665 PP
== domain 2 score: 5.1 bits; conditional E-value: 0.0017
Pox_MCEL 166 rtvlrNvaellasGGkvlgTtpdgdelskltvkklkviekdlps 209
+ v+ ++++++sGG++++T d s + k++++i+k +
tr|Q54LU3|Q54LU3_DICDI 163 DLVISEMTRVIKSGGRIVITDADWSSTSVSIPKNIEEINK---K 203
5688899****************99999999999999964...3 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (333 nodes)
Target sequences: 12739 (6856946 residues searched)
Passed MSV filter: 1905 (0.149541); expected 254.8 (0.02)
Passed bias filter: 149 (0.0116964); expected 254.8 (0.02)
Passed Vit filter: 17 (0.00133448); expected 12.7 (0.001)
Passed Fwd filter: 3 (0.000235497); expected 0.1 (1e-05)
Initial search space (Z): 12739 [actual number of targets]
Domain search space (domZ): 3 [number of targets reported over threshold]
# CPU time: 0.18u 0.01s 00:00:00.19 Elapsed: 00:00:00.07
# Mc/sec: 32619.47
//
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