# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/Pox_MCEL.hmm.txt
# target sequence database: proteomes/Monosiga_brevicollis.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: Pox_MCEL [M=333]
Accession: PF03291.15
Description: mRNA capping enzyme
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6e-33 113.4 0.0 9e-33 112.8 0.0 1.2 1 tr|A9VAN6|A9VAN6_MONBE Predicted protein OS=Monosiga brevico
0.0064 14.7 0.0 0.027 12.7 0.0 1.8 1 tr|A9UYM4|A9UYM4_MONBE Predicted protein OS=Monosiga brevico
------ inclusion threshold ------
0.054 11.7 0.0 0.077 11.1 0.0 1.2 1 tr|A9V2V4|A9V2V4_MONBE Predicted protein OS=Monosiga brevico
0.078 11.1 0.0 0.6 8.2 0.0 2.0 1 tr|A9VD27|A9VD27_MONBE Predicted protein OS=Monosiga brevico
Domain annotation for each sequence (and alignments):
>> tr|A9VAN6|A9VAN6_MONBE Predicted protein OS=Monosiga brevicollis OX=81824 GN=29289 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 112.8 0.0 3.9e-36 9e-33 17 332 .. 6 321 .. 2 322 .. 0.81
Alignments for each domain:
== domain 1 score: 112.8 bits; conditional E-value: 3.9e-36
Pox_MCEL 17 hynerpetgel....lkkRiastiiylrnlnNyiKslLiseyasktkldesnklkvLdldcgkGgDLeKyekgeIsklvatDiaees 99
hy ++ ++g++ k+R++ + lr++ N +K Li+ + +++++ Ldl+cg+GgD K+ ++I + +++Dia
tr|A9VAN6|A9VAN6_MONBE 6 HYVHQAHHGRTyqeaHKSRQEAVTKPLREYHNDVKNRLIHRFSREVED-------HLDLACGRGGDAWKWVGARIHHVLGVDIAPSL 85
555665555441111688999999********************9999.......8******************************* PP
Pox_MCEL 100 ieeckeRYnklrsekkskyykFdaelirsdsfvssvrevfedyelkfdivslQFaiHYsFeseekartvlrNvaellasGGkvlgTt 186
+++++eR r++k + +ae++ sd+ ++ e fd vs+ Fa HY Fes+e a+ ++N+a+ l++GG++ gTt
tr|A9VAN6|A9VAN6_MONBE 86 LDDARERIDIIRQKKPD--HDLTAEFMESDALGKHDIEW----GQTFDTVSCMFAAHYLFESKESANQFFENAAAALKEGGYFYGTT 166
********777777666..47999******998875554....478***************************************** PP
Pox_MCEL 187 pdgdelskltvkklkviekdlpsfgNsiyvvkfeeekievplfGakYeynledvvkd.......v....pEyivkfealvklaeeYg 262
+ ++ + l +++++ Ns+ +k +++++ fG Y++ l + v++ v +Ey+ f +++klae g
tr|A9VAN6|A9VAN6_MONBE 167 ICAKRV-------LALLG-KEKEYRNSVLLIKALWDQPSK--FGSGYTFALANTVTNhsdeaddVeggaTEYLTFFSVFTKLAERHG 243
998888.......33343.456788*********999999..*******998888753333333333337***************** PP
Pox_MCEL 263 leLvdkkdfaeiieesikkelkklikrvskleerkstknf...........eelnrsalkstlgkdeeealsyYlvfvfeK 332
l v +++ + ++ +++ +l +r +++++ + f e+ + ++ ++l d e a ++Y +fvf+K
tr|A9VAN6|A9VAN6_MONBE 244 LYPVRDLNWS--FGRNKRSRRDTLFEREP-ADHQEAFRYFqpqfcahpnsqEQGDAAEADNGLLSDLEKASRLYAAFVFQK 321
9988776654..55554444555555544.45555555557777777777766777777889999***************9 PP
>> tr|A9UYM4|A9UYM4_MONBE Predicted protein OS=Monosiga brevicollis OX=81824 GN=25176 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 12.7 0.0 1.2e-05 0.027 63 195 .. 179 297 .. 171 309 .. 0.76
Alignments for each domain:
== domain 1 score: 12.7 bits; conditional E-value: 1.2e-05
Pox_MCEL 63 snklkvLdldcgkGgDLeKyekgeIs.klvatDiaeesieeckeRYnklrsekkskyykFdaelirsdsfvssvrevfedyelkfdi 148
+++ +vLdl+cg+G L ++ + + +l + D ++ i++++ R s+k+ +F++ + + ++ + fd+
tr|A9UYM4|A9UYM4_MONBE 179 PDQAAVLDLCCGQGRHLLELSQRRSDlQLFGLDQSAFLIQTAQARA--DASQKNV---HFTV----GTCD------ALPYEANSFDL 250
57889************9999888775799**************98..3333333...2444....3332......22224456888 PP
Pox_MCEL 149 vslQFaiHYsFeseekartvlrNvaellasGGkvlgTtpdgdelskl 195
v + Fe e ++v++ v ++l++GG+vl + dg+ +++
tr|A9UYM4|A9UYM4_MONBE 251 VTIMGNSFGYFERAEVDQIVIAEVQRVLKPGGTVLLDLTDGEHMKNT 297
887666555688888888999***************99999999654 PP
>> tr|A9V2V4|A9V2V4_MONBE Predicted protein OS=Monosiga brevicollis OX=81824 GN=9348 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.1 0.0 3.4e-05 0.077 65 183 .. 53 161 .. 44 168 .. 0.63
Alignments for each domain:
== domain 1 score: 11.1 bits; conditional E-value: 3.4e-05
Pox_MCEL 65 klkvLdldcgkG.gDL.eKyekgeIsklvatDiaeesieeckeRYnklrsekkskyykFdaelirsdsfvssvrevfedyelkfdiv 149
+vLdl+cg+G + L + g++ ++ ++D +++++e++ Y ++++++ + +++++ +++ e+ + +fd+v
tr|A9V2V4|A9V2V4_MONBE 53 GNRVLDLGCGNGhATLgLASFVGRVGRITGVDTSAKALESAAA-YVQQNRDEDAM---ARVSFLKAEIP-NNMAEL---ANKRFDLV 131
568*********5455335689****************99876.76777666553...23344444322.222232...24566666 PP
Pox_MCEL 150 slQFaiHYsFeseekartvlrNvaellasGGkvl 183
+ s+ +e a l+ ell +GG++l
tr|A9V2V4|A9V2V4_MONBE 132 YSRLLF--SYVPEPLA--SLETCKELLWPGGRIL 161
665443..33444444..4555566666666655 PP
>> tr|A9VD27|A9VD27_MONBE Predicted protein OS=Monosiga brevicollis OX=81824 GN=34649 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 8.2 0.0 0.00026 0.6 63 109 .. 49 94 .. 33 158 .. 0.69
Alignments for each domain:
== domain 1 score: 8.2 bits; conditional E-value: 0.00026
Pox_MCEL 63 snklkvLdldcgkGgDLeKyekgeIsklvatDiaeesieeckeRYnk 109
++l+vL+++cg G L +++++ +a+D++++ i++ keR k
tr|A9VD27|A9VD27_MONBE 49 WKQLSVLEVGCGAGV-LSLELAARVKDVLAADPSAAMIAKLKERQAK 94
57899*******986.77778999***************99999733 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (333 nodes)
Target sequences: 9188 (5511963 residues searched)
Passed MSV filter: 243 (0.0264475); expected 183.8 (0.02)
Passed bias filter: 158 (0.0171963); expected 183.8 (0.02)
Passed Vit filter: 26 (0.00282978); expected 9.2 (0.001)
Passed Fwd filter: 4 (0.00043535); expected 0.1 (1e-05)
Initial search space (Z): 9188 [actual number of targets]
Domain search space (domZ): 4 [number of targets reported over threshold]
# CPU time: 0.13u 0.01s 00:00:00.14 Elapsed: 00:00:00.05
# Mc/sec: 36709.67
//
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