# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/Pox_MCEL.hmm.txt
# target sequence database: proteomes/Mus_musculus.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: Pox_MCEL [M=333]
Accession: PF03291.15
Description: mRNA capping enzyme
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2e-125 418.6 3.3 3.2e-125 418.0 3.3 1.3 1 sp|Q9D0L8|MCES_MOUSE mRNA cap guanine-N7 methyltransferase O
------ inclusion threshold ------
0.078 12.4 0.0 1.4 8.3 0.0 2.0 1 sp|Q8BMS4|COQ3_MOUSE Ubiquinone biosynthesis O-methyltransfe
Domain annotation for each sequence (and alignments):
>> sp|Q9D0L8|MCES_MOUSE mRNA cap guanine-N7 methyltransferase OS=Mus musculus OX=10090 GN=Rnmt PE=1 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 418.0 3.3 2.8e-129 3.2e-125 4 333 .] 128 464 .. 125 464 .. 0.98
Alignments for each domain:
== domain 1 score: 418.0 bits; conditional E-value: 2.8e-129
Pox_MCEL 4 aetesevtdlvathynerpetgellkkRiastiiylrnlnNyiKslLiseyasktkldesnklkvLdldcgkGgDLeKyekgeIsklva 92
++ e++++++va+hyne++e g l+kR++s+i+ylrn+nN+iKs+Li+e+++k++++++++++vLdl+cgkGgDL K++kg+Is+lv+
sp|Q9D0L8|MCES_MOUSE 128 QKLEEGHSSAVAAHYNELQEVG--LAKRSQSRIFYLRNFNNWIKSILIGEILEKVRQRKTRDITVLDLGCGKGGDLLKWRKGRISRLVC 214
678999****************..***************************************************************** PP
Pox_MCEL 93 tDiaeesieeckeRY..nklrsekkskyykFdaelirsdsfvssvrevfedyelkfdivslQFaiHYsFeseekartvlrNvaellasG 179
+Dia+ s+++c++RY +++r+++++ F+ae+i++d+ ++ + e+f+d+e++fd++s+QFa+HYsFes+ +a+t+lrN++ +l++G
sp|Q9D0L8|MCES_MOUSE 215 ADIADISMKQCQQRYedMRCRRDNEHI---FSAEFITADCSKELLVEKFRDPEMYFDVCSCQFACHYSFESQVQADTMLRNACGRLNPG 300
***************777777777776...*********************************************************** PP
Pox_MCEL 180 GkvlgTtpdgdelskltvkklkviekdlpsfgNsiyvvkfeeekievplfGakYeynledvvkdvpEyivkfealvklaeeYgleLvdk 268
G+++gTtp+++el +++l+++e ++sfgN+iy+vkf+ +k ++plfG+kY++nle+vv dvpE++v+f+ l+++a++Y+++L++k
sp|Q9D0L8|MCES_MOUSE 301 GYFIGTTPNSFEL----IRRLEASE--TESFGNEIYTVKFQ-KKGNYPLFGCKYDFNLEGVV-DVPEFLVYFPLLTEMAKKYNMKLIYK 381
*************....*******6..**************.8999****************.************************** PP
Pox_MCEL 269 kdfaeiieesikke.lkklikrvskleerkstknf.................eelnrsalkstlgkdeeealsyYlvfvfeKr 333
k+f e++ee+ik++ +k+l+kr+++le++++++n+ ++++++ + +tl+k+e+ea+s+Ylvf+feK+
sp|Q9D0L8|MCES_MOUSE 382 KTFLEFYEEKIKNNeNKMLLKRMQALEQYPAHENSklasekvgdythaaeylKKSQVRLPLGTLSKSEWEATSIYLVFAFEKQ 464
*************99*************************************9*****************************6 PP
>> sp|Q8BMS4|COQ3_MOUSE Ubiquinone biosynthesis O-methyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Coq3 PE=
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 8.3 0.0 0.00012 1.4 45 194 .. 128 261 .. 90 294 .. 0.65
Alignments for each domain:
== domain 1 score: 8.3 bits; conditional E-value: 0.00012
Pox_MCEL 45 yiKslLiseyasktkldesnklkvLdldcgkGgDLeKyekgeI.sklvatDiaeesieeckeRYnklrsekkskyykFdaelirsdsfv 132
+i+ L+++ as++ + + +k+Ld++cg G L g++ ++ v++D+ +e i+ +++ k+ + v
sp|Q8BMS4|COQ3_MOUSE 128 FIRDNLLKTSASHHPGKPLSGMKILDVGCGGG--LLTEPLGRLgASVVGIDPVAENIKIAQHHKSFDPVLDKRI-----------QYKV 203
57777888888888888888899999999744..5555566653678899999999988876442222222222...........2222 PP
Pox_MCEL 133 ssvrevfedyelkfd.ivslQFaiHYsFeseekartvlrNvaellasGGkvlgTtpdgdelsk 194
s++e++++ + fd +v + H s+ ++ ++ ++l++GG +++Tt++ +ls+
sp|Q8BMS4|COQ3_MOUSE 204 CSLEEAVDESAECFDaVVASEVVEHVSH-----LEMFIQCCYQVLKPGGSLFITTVNKTQLSY 261
3344444444444442333344444442.....235556666777777777777777777765 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (333 nodes)
Target sequences: 22289 (11757923 residues searched)
Passed MSV filter: 898 (0.0402889); expected 445.8 (0.02)
Passed bias filter: 403 (0.0180807); expected 445.8 (0.02)
Passed Vit filter: 31 (0.00139082); expected 22.3 (0.001)
Passed Fwd filter: 2 (8.97304e-05); expected 0.2 (1e-05)
Initial search space (Z): 22289 [actual number of targets]
Domain search space (domZ): 2 [number of targets reported over threshold]
# CPU time: 0.28u 0.01s 00:00:00.29 Elapsed: 00:00:00.11
# Mc/sec: 35594.44
//
[ok]