# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/Pox_MCEL.hmm.txt
# target sequence database: proteomes/Nematostella_vectensis.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: Pox_MCEL [M=333]
Accession: PF03291.15
Description: mRNA capping enzyme
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.3e-101 338.8 3.4 5e-101 338.6 3.4 1.0 1 tr|A7S6Z4|A7S6Z4_NEMVE Predicted protein (Fragment) OS=Nemat
------ inclusion threshold ------
0.043 13.4 0.1 0.15 11.6 0.1 1.7 2 tr|A7RKE2|A7RKE2_NEMVE Protein-lysine N-methyltransferase v1
0.059 12.9 0.1 0.43 10.1 0.0 2.3 3 tr|A7S2A7|A7S2A7_NEMVE Predicted protein OS=Nematostella vec
Domain annotation for each sequence (and alignments):
>> tr|A7S6Z4|A7S6Z4_NEMVE Predicted protein (Fragment) OS=Nematostella vectensis OX=45351 GN=v1g12461 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 338.6 3.4 6.2e-105 5e-101 13 313 .. 2 294 .. 1 299 [. 0.94
Alignments for each domain:
== domain 1 score: 338.6 bits; conditional E-value: 6.2e-105
Pox_MCEL 13 lvathynerpetgellkkRiastiiylrnlnNyiKslLiseyasktkldesnklkvLdldcgkGgDLeKyekgeIsklvatDiaees 99
va+hyne+pe + ++R++s+i+++rn+nN++Ks+Li+ +++k k + ++++vLdl+cgkGgDL K++ g+I +lv++Diae+s
tr|A7S6Z4|A7S6Z4_NEMVE 2 TVAKHYNEHPEGS--KESRKDSRIFHMRNFNNWVKSVLIGDFLNKIKRYNYRDISVLDLCCGKGGDLLKWQRGRIRQLVCADIAEVS 86
599********55..8*********************************************************************** PP
Pox_MCEL 100 ieeckeRYnklrsekkskyyk...FdaelirsdsfvssvrevfedyelkfdivslQFaiHYsFeseekartvlrNvaellasGGkvl 183
+++ckeRYn+++++ ++ +y+ F +++i++d+ ++++ + f d+el+fd+ s+QF++HYsFes e+a+++l+N++e l++GG+++
tr|A7S6Z4|A7S6Z4_NEMVE 87 VNQCKERYNEMKQTAEERRYRdgiFYTQFITADCSKERIADQFTDPELQFDLTSCQFSYHYSFESYEQADMMLKNACEKLKPGGFFI 173
********9999999999997666888************************************************************ PP
Pox_MCEL 184 gTtpdgdelskltvkklkviekdlpsfgNsiyvvkfeeekievplfGakYeynledvvkdvpEyivkfealvklaeeYgleLvdkkd 270
gTtp+g el v +l+++e +fgN++y +kfe +k pl+G+kY+++le+vv d+pE++v+f+ + k+ae+Y+++Lv +k+
tr|A7S6Z4|A7S6Z4_NEMVE 174 GTTPNGSEL----VHRLREAE--GLEFGNEVYRIKFE-NKEDFPLYGCKYDFHLEGVV-DCPEFLVYFPLFEKMAEKYDMKLVFVKT 252
*********....99999995..99************.677789**************.**************************** PP
Pox_MCEL 271 faeiieesikkelkklikrvskleerkstknfeelnrsalkst 313
f+e+++ + +++ +l+ r+++le ++ ++ ++ s++ +
tr|A7S6Z4|A7S6Z4_NEMVE 253 FHEFFHDH-QNDSLNLLYRMNALETYPKREGESQASSSENAYS 294
*******9.77799************99987666666665555 PP
>> tr|A7RKE2|A7RKE2_NEMVE Protein-lysine N-methyltransferase v1g198391 OS=Nematostella vectensis OX=45351 GN=v1g198391
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.6 0.1 1.8e-05 0.15 54 103 .. 57 105 .. 53 125 .. 0.88
2 ? -1.0 0.0 0.12 1e+03 43 57 .. 181 195 .. 155 210 .. 0.78
Alignments for each domain:
== domain 1 score: 11.6 bits; conditional E-value: 1.8e-05
Pox_MCEL 54 yasktkldesnklkvLdldcgkGgDLeKyekgeIsklvatDiaeesieec 103
+++k s++ ++Ld++cg+G L + + + l+++D ++++i+ +
tr|A7RKE2|A7RKE2_NEMVE 57 WIKKCPR-ISKNSSILDVGCGNGMLLVPLAQDNYKDLLGIDYSAAAIKLA 105
6666665.78999**********************************976 PP
== domain 2 score: -1.0 bits; conditional E-value: 0.12
Pox_MCEL 43 nNyiKslLiseyask 57
N+ Ks Li+++ ++
tr|A7RKE2|A7RKE2_NEMVE 181 CNWTKSELIKQFQNE 195
488888888888665 PP
>> tr|A7S2A7|A7S2A7_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g101521 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 10.1 0.0 5.3e-05 0.43 69 107 .. 75 113 .. 66 147 .. 0.81
2 ? -0.5 0.0 0.085 7e+02 170 194 .. 153 177 .. 122 191 .. 0.75
3 ? -1.8 0.0 0.22 1.8e+03 168 194 .. 202 227 .. 193 253 .. 0.74
Alignments for each domain:
== domain 1 score: 10.1 bits; conditional E-value: 5.3e-05
Pox_MCEL 69 LdldcgkGgDLeK.yekgeIsklvatDiaeesieeckeRY 107
+dl+cg+G L+K +k +I klv D ae+ +++c+e
tr|A7S2A7|A7S2A7_NEMVE 75 MDLGCGRGH-LNKhLSKDQIGKLVLLDSAEKMLKQCQENE 113
799***986.66626899*******************965 PP
== domain 2 score: -0.5 bits; conditional E-value: 0.085
Pox_MCEL 170 rNvaellasGGkvlgTtpdgdelsk 194
+ v +l++ G ++g + +gd+l +
tr|A7S2A7|A7S2A7_NEMVE 153 HQVLSCLKPDGAFVGAMFSGDTLFE 177
557789***************9944 PP
== domain 3 score: -1.8 bits; conditional E-value: 0.22
Pox_MCEL 168 vlrNvaellasGGkvlgTtpdgdelsk 194
+r + +ll++ G+ l Tt+d+de+s
tr|A7S2A7|A7S2A7_NEMVE 202 EMRDIGNLLTRAGYSL-TTIDSDEISV 227
5888888888888887.5679999964 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (333 nodes)
Target sequences: 24428 (8257945 residues searched)
Passed MSV filter: 944 (0.0386442); expected 488.6 (0.02)
Passed bias filter: 472 (0.0193221); expected 488.6 (0.02)
Passed Vit filter: 40 (0.00163747); expected 24.4 (0.001)
Passed Fwd filter: 3 (0.00012281); expected 0.2 (1e-05)
Initial search space (Z): 24428 [actual number of targets]
Domain search space (domZ): 3 [number of targets reported over threshold]
# CPU time: 0.21u 0.01s 00:00:00.22 Elapsed: 00:00:00.06
# Mc/sec: 45831.59
//
[ok]