# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/Pox_MCEL.hmm.txt
# target sequence database: proteomes/Strongylocentrotus_purpuratus.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: Pox_MCEL [M=333]
Accession: PF03291.15
Description: mRNA capping enzyme
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.9e-100 336.9 1.6 2.4e-100 336.5 1.6 1.1 1 tr|W4YD96|W4YD96_STRPU mRNA cap guanine-N7 methyltransferase
0.0056 16.5 0.0 0.0066 16.3 0.0 1.3 1 tr|W4YRU1|W4YRU1_STRPU Uncharacterized protein OS=Strongyloc
------ inclusion threshold ------
0.01 15.6 0.0 0.014 15.2 0.0 1.3 1 tr|W4XTJ8|W4XTJ8_STRPU Uncharacterized protein OS=Strongyloc
0.017 14.9 0.0 0.021 14.6 0.0 1.2 1 tr|W4ZFV8|W4ZFV8_STRPU Uncharacterized protein OS=Strongyloc
0.023 14.5 0.0 6.7 6.4 0.0 2.2 2 tr|W4Y7A2|W4Y7A2_STRPU Uncharacterized protein OS=Strongyloc
0.039 13.7 0.0 0.054 13.3 0.0 1.2 1 tr|W4XJA0|W4XJA0_STRPU Uncharacterized protein OS=Strongyloc
0.32 10.7 0.0 0.47 10.2 0.0 1.2 1 tr|W4XZA2|W4XZA2_STRPU Uncharacterized protein OS=Strongyloc
Domain annotation for each sequence (and alignments):
>> tr|W4YD96|W4YD96_STRPU mRNA cap guanine-N7 methyltransferase OS=Strongylocentrotus purpuratus OX=7668 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 336.5 1.6 6e-104 2.4e-100 2 332 .. 45 390 .. 44 391 .. 0.93
Alignments for each domain:
== domain 1 score: 336.5 bits; conditional E-value: 6e-104
Pox_MCEL 2 geaetesevtdlvathynerpetgellkkRiastiiylrnlnNyiKslLiseyasktkldesnklkvLdldcgkGgDLeKyekgeIs 88
+ea++e++++ va+hyn+++e + + +R +s+i+y rn+nN+iKs++i + ++ ++ ++ +vLdl+cgkGgDL K++kg+I+
tr|W4YD96|W4YD96_STRPU 45 TEAKKETGLSGTVAKHYNDLREGS--VFDRARSRIYYQRNFNNWIKSMIIANSLKAVHR--KKGCTVLDLCCGKGGDLLKWTKGHIK 127
6788999999************55..99************************9999988..8899********************** PP
Pox_MCEL 89 klvatDiaeesieeckeRY.....nklrsekkskyykFdaelirsdsfvssvrevfedyelkfdivslQFaiHYsFeseekartvlr 170
klv++Dia++s+++c++RY + ++++ ++ +F ae+i +d+ ++ ++e+++++++ fd++s+QF++HYsFe+ ++art+lr
tr|W4YD96|W4YD96_STRPU 128 KLVCADIAAVSVQQCQKRYndmveR---NRRSGNQKTFAAEFISADCAEVLLTERYQEKDMLFDLCSCQFSFHYSFEAAARARTMLR 211
*******************874433...444444557************************************************** PP
Pox_MCEL 171 NvaellasGGkvlgTtpdgdelskltvkklkviekdlpsfgNsiyvvkfeeekievplfGakYeynledvvkdvpEyivkfealvkl 257
N++e+l++GG+++gT+p+g+el v +lk++ d fgN++y+v+fe +k + pl+G+kY+++le+vv d+pE++++f+ l ++
tr|W4YD96|W4YD96_STRPU 212 NACERLRPGGYFVGTIPNGYEL----VSRLKES--DGLTFGNEVYKVTFE-NKETFPLYGCKYDFHLEGVV-DCPEFMIYFPLLEEM 290
**********************....8888877..79*************.677789**************.*************** PP
Pox_MCEL 258 aeeYgleLvdkkdfaeiieesikke.lkklikrvskleerkstknf........................eelnrsalkstlgkdee 319
a+e+++eLv+ k+f++i+ee+ ++ +++li+++++le+ +++k + +e ++ ++ +tl+k+e+
tr|W4YD96|W4YD96_STRPU 291 AKEFDMELVYLKKFQDIYEENCESVdNQALISKMQALEQFPPEKGTgtaskkeddyshaetrhtevmgmeNEDKKPTSIGTLSKSEW 377
**********************9999******************99********************998766666677789****** PP
Pox_MCEL 320 ealsyYlvfvfeK 332
ea s+Y +f+f+K
tr|W4YD96|W4YD96_STRPU 378 EASSLYCAFAFKK 390
************9 PP
>> tr|W4YRU1|W4YRU1_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 16.3 0.0 1.6e-06 0.0066 44 107 .. 154 221 .. 54 293 .. 0.86
Alignments for each domain:
== domain 1 score: 16.3 bits; conditional E-value: 1.6e-06
Pox_MCEL 44 NyiKslLiseyasktkl...desnklkvLdldcgkG.gDLeKyekgeIsklvatDiaeesieeckeRY 107
++ + L++ ++ + ++++ +++Ldl+cg+G + L e s+ v+ D +ee+i+ +keR
tr|W4YRU1|W4YRU1_STRPU 154 IWVLQHLVQDFIPSMPQieeRMKSGIRILDLGCGRGlASLVFAENYPNSTVVGLDFSEEAINYGKERA 221
4888999999977655544388999***********888999999999*******************7 PP
>> tr|W4XTJ8|W4XTJ8_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 15.2 0.0 3.5e-06 0.014 43 107 .. 409 477 .. 247 537 .. 0.89
Alignments for each domain:
== domain 1 score: 15.2 bits; conditional E-value: 3.5e-06
Pox_MCEL 43 nNyiKslLiseyasktkl...desnklkvLdldcgkG.gDLeKyekgeIsklvatDiaeesieeckeRY 107
+ ++ + L++ ++ + ++++ +++Ldl+cg+G + L e s+ v+ D +ee+i+ +keR
tr|W4XTJ8|W4XTJ8_STRPU 409 SIWVLQHLVQDFIPSMPQieeRMKSGIRILDLGCGRGlASLAFAESYPNSTVVGLDFSEEAINYGKERA 477
45888999999987655544388999***********778888888899*******************7 PP
>> tr|W4ZFV8|W4ZFV8_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 14.6 0.0 5.1e-06 0.021 43 108 .. 180 249 .. 73 283 .. 0.85
Alignments for each domain:
== domain 1 score: 14.6 bits; conditional E-value: 5.1e-06
Pox_MCEL 43 nNyiKslLiseyasktkl...desnklkvLdldcgkG.gDLeKyekgeIsklvatDiaeesieeckeRYn 108
+ ++ +++ ++ + ++++ +++Ldl+cg+G + L e s+ v+ D ++e+i+ +keR +
tr|W4ZFV8|W4ZFV8_STRPU 180 SRWVLNHMVQDFIPSMPQieeQMKSGIRILDLGCGRGsASLVFAESYPNSTVVGLDFSQEAINYGKERAK 249
45888888888876555433378889***********45677777888999*****************73 PP
>> tr|W4Y7A2|W4Y7A2_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 5.7 0.0 0.0027 11 45 105 .. 85 149 .. 52 177 .. 0.72
2 ? 6.4 0.0 0.0016 6.7 62 105 .. 269 313 .. 261 341 .. 0.74
Alignments for each domain:
== domain 1 score: 5.7 bits; conditional E-value: 0.0027
Pox_MCEL 45 yiKslLiseyasktkl...desnklkvLdldcgkG.gDLeKyekgeIsklvatDiaeesieecke 105
+ L++e++ + + +++Ld++cg G + + +k s++v++Dia+ ++e++
tr|W4Y7A2|W4Y7A2_STRPU 85 WYTDTLVQEFIPSYPEiqaKLEMGIRMLDVGCGAGlATQILAKKFPESHFVGVDIAQSMVDEANA 149
44456777777655442214456799********94333444566779************99986 PP
== domain 2 score: 6.4 bits; conditional E-value: 0.0016
Pox_MCEL 62 esnklkvLdldcgkG.gDLeKyekgeIsklvatDiaeesieecke 105
+ ++vLd++cg G + + +k s++v++Dia+ ++e++
tr|W4Y7A2|W4Y7A2_STRPU 269 KEMGIRVLDVGCGAGlATQILAKKFPESHFVGVDIAQSIVDEANA 313
34479**********4333445566779**********9999976 PP
>> tr|W4XJA0|W4XJA0_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 13.3 0.0 1.3e-05 0.054 64 104 .. 234 275 .. 204 336 .. 0.80
Alignments for each domain:
== domain 1 score: 13.3 bits; conditional E-value: 1.3e-05
Pox_MCEL 64 nklkvLdldcgkGgD.LeKyekgeIsklvatDiaeesieeck 104
+ ++vLd++cg+Gg + ++ s+++++Di +i+++k
tr|W4XJA0|W4XJA0_STRPU 234 SGITVLDVGCGEGGAsILMAKQYPNSRFIGIDICSYAIQQAK 275
5689********87625555666789**************97 PP
>> tr|W4XZA2|W4XZA2_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 10.2 0.0 0.00011 0.47 64 105 .. 177 219 .. 162 254 .. 0.82
Alignments for each domain:
== domain 1 score: 10.2 bits; conditional E-value: 0.00011
Pox_MCEL 64 nklkvLdldcgkGgDLeK.yekgeIsklvatDiaeesieecke 105
+ +++Ld++cg G+ + e s++v++ i e+s+++++
tr|W4XZA2|W4XZA2_STRPU 177 KGISMLDVGCGHGAGILNlAEHYPRSRFVGIEIGEDSVKSARD 219
56899********986651567788**************9986 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (333 nodes)
Target sequences: 28594 (14266044 residues searched)
Passed MSV filter: 1342 (0.0469329); expected 571.9 (0.02)
Passed bias filter: 697 (0.0243757); expected 571.9 (0.02)
Passed Vit filter: 57 (0.00199343); expected 28.6 (0.001)
Passed Fwd filter: 7 (0.000244807); expected 0.3 (1e-05)
Initial search space (Z): 28594 [actual number of targets]
Domain search space (domZ): 7 [number of targets reported over threshold]
# CPU time: 0.36u 0.01s 00:00:00.37 Elapsed: 00:00:00.10
# Mc/sec: 47505.93
//
[ok]