# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/Pox_MCEL.hmm.txt
# target sequence database: proteomes/Trichomonas_vaginalis.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: Pox_MCEL [M=333]
Accession: PF03291.15
Description: mRNA capping enzyme
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.6e-55 187.6 1.2 1.1e-54 187.3 1.2 1.1 1 tr|A2FYD5|A2FYD5_TRIVA mRNA cap guanine-N7 methyltransferase
1.3e-54 187.0 1.8 1.7e-54 186.6 1.8 1.1 1 tr|A2E7Y7|A2E7Y7_TRIVA mRNA cap guanine-N7 methyltransferase
------ inclusion threshold ------
0.034 14.7 0.1 0.13 12.8 0.1 1.9 1 tr|A2F2A3|A2F2A3_TRIVA Menaquinone biosynthesis methyltransf
Domain annotation for each sequence (and alignments):
>> tr|A2FYD5|A2FYD5_TRIVA mRNA cap guanine-N7 methyltransferase OS=Trichomonas vaginalis OX=5722 GN=TVAG_258890 PE=3 SV
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 187.3 1.2 6.4e-59 1.1e-54 24 333 .] 17 303 .. 2 303 .. 0.83
Alignments for each domain:
== domain 1 score: 187.3 bits; conditional E-value: 6.4e-59
Pox_MCEL 24 tgellkkRiastiiylrnlnNyiKslLiseyasktkldesnklkvLdldcgkGgDLeKyekgeIsklvatDiaeesieeckeRYnkl 110
k+R +s+ ++lr++nN+iKs Li++y+s+ + vLdl+ gkGgD+ K+ + +++v +Dia+es++ec ++Y k
tr|A2FYD5|A2FYD5_TRIVA 17 Y---GKERLQSQTLHLRHFNNWIKSSLINKYCSPYSI-------VLDLASGKGGDISKWIHKAPAHIVFADIAKESMKECYKKYYKY 93
3...49*******************************.......****************************************333 PP
Pox_MCEL 111 rsekkskyykFdaelirsdsfvssvrevfedyelkfdivslQFaiHYsFeseekartvlrNvaellasGGkvlgTtpdgdelskltv 197
+ ++i +d+f ++++++ +++kf+i s+QFa+HY+Fes eka +++N++ l +GG++l+Tt++++ l l +
tr|A2FYD5|A2FYD5_TRIVA 94 SDS-------LLGTFIVGDTFGCKLNKLV--PDMKFNIASCQFALHYAFESYEKASQAIENLCSQLLPGGYLLITTINAFRLVDLFR 171
222.......23489**************..78*************************************************88877 PP
Pox_MCEL 198 kklkv..iekdlpsfgNsiyv.vkfeeekievplfGakYeynledvvkdvpEyivkfealvklaeeYgleLvdkkdfaeiieesikk 281
+ ++++++++ Ns+++ v+ + +++ p+fGa Y ++l++ v v+Ey+++ +l +l+ g+ v f+e+++ +++
tr|A2FYD5|A2FYD5_TRIVA 172 EQEAKggTQEQKRKISNSVFSaVRHFDFEPSIPAFGAGYVFYLNESVGHVKEYLIHSVVLDQLCAVQGMSPVASYGFHEFYNTVLNN 258
444331245678899999976144333556669**************************************************9888 PP
Pox_MCEL 282 elkklikrvskleerkstknfeelnrsalkstlgkdeeealsyYlvfvfeKr 333
k + + + + + + +de+ + +Y +v++K+
tr|A2FYD5|A2FYD5_TRIVA 259 PEFDAEKDLF-------YNTLKRQQGGLQLAEMTEDEWFVCGLYSFYVYQKQ 303
5333333333.......22233445555555667899999999999999996 PP
>> tr|A2E7Y7|A2E7Y7_TRIVA mRNA cap guanine-N7 methyltransferase OS=Trichomonas vaginalis OX=5722 GN=TVAG_127190 PE=3 SV
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 186.6 1.8 1e-58 1.7e-54 11 332 .. 8 306 .. 3 307 .. 0.89
Alignments for each domain:
== domain 1 score: 186.6 bits; conditional E-value: 1e-58
Pox_MCEL 11 tdlvathynerpetgellkkRiastiiylrnlnNyiKslLiseyasktkldesnklkvLdldcgkGgDLeKyekgeIsklvatDiae 97
+ va+ yn + t+ lk+R +s ++lr++nN++Ks Li +y+ ++++ ++Ldl+cgkGgD+ Ky+ + + + +Di++
tr|A2E7Y7|A2E7Y7_TRIVA 8 VNTVADGYNLTKTTS--LKERAESSTFHLREFNNWVKSWLILKYCPQQNA------NILDLACGKGGDIPKYKLKNPAFIAFADISD 86
577899999998877..*****************************9999......9*****************999988889**** PP
Pox_MCEL 98 esieeckeRYnklrsekkskyykFdaelirsdsfvssvrevfedyelkfdivslQFaiHYsFeseekartvlrNvaellasGGkvlg 184
es++ec ++Y+ l ++k a++i +dsf+ +++ ++ +++ f s+QFa+HY+F+s+e a+ +++N+++ l +G ++ +
tr|A2E7Y7|A2E7Y7_TRIVA 87 ESVKECYRKYKPLSDKIK-------AQFIIGDSFNCNLKSLL--PKITFHYSSCQFALHYAFKSQEMAEKAVANLTDQLLPGRYISI 164
**********66655555.......57***************..89***************************************** PP
Pox_MCEL 185 Ttpdgdelskltvkklkviekdlp...sfgNsiyvvkfeeekievplfGakYeynledvvkdvpEyivkfealvklaeeYgleLvdk 268
Tt+++ l +l + + + ++ + + N++y k + + ++ p+fGa Y ++l+++v+ + Ey+v+ ++l l++ + eLv++
tr|A2E7Y7|A2E7Y7_TRIVA 165 TTVNACRLVRLFRERYDRYPPGDEtsdTISNDLYLAKRNFDLKNIPPFGAGYIFYLKNAVNSIEEYLVHPKVLIDLFKAKNCELVYN 251
***********9999988876554111678********************************************************* PP
Pox_MCEL 269 kdfaeiieesikke..lkklikrvskleerkstknfeelnrsalkstlgkdeeealsyYlvfvfeK 332
k f+e++ e +++ k l ++ tk +++ +a + +e++++ +Y +fvf K
tr|A2E7Y7|A2E7Y7_TRIVA 252 KGFQEFYYEACNSNpeAKDLYIKLL-------TKKTKDFSGAA----MTYSEWDIIWLYSIFVFVK 306
*********9888766677777766.......33333333333....45789************98 PP
>> tr|A2F2A3|A2F2A3_TRIVA Menaquinone biosynthesis methyltransferase, putative OS=Trichomonas vaginalis OX=5722 GN=TVAG
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 12.8 0.1 7.8e-06 0.13 7 108 .. 8 115 .. 3 207 .. 0.77
Alignments for each domain:
== domain 1 score: 12.8 bits; conditional E-value: 7.8e-06
Pox_MCEL 7 esevtdlvathynerpetgellkkRiastiiylrnlnNyiKslLiseyasktkldesnklkvLdldcgkGgDLeKyekgeIsklvat 93
++e+++++++ ++ +e++ ++R +++ ++ +n ++K +e++ ++ + + + L+l+cg+ + +k v++
tr|A2F2A3|A2F2A3_TRIVA 8 DQELENILNHPAPAYNEKS-YWNSRYEKETESFEWYNSWVKL---KEHVAQHIN---GSGTALNLGCGNSNMTSELLLNGFDKVVGI 87
5666777777777777766.6888999999999999999993...344443333...47789************************* PP
Pox_MCEL 94 DiaeesieeckeRY.............n 108
D +e+ i + +++Y +
tr|A2F2A3|A2F2A3_TRIVA 88 DFSEVVIGQMRKKYqleqklewetgdiT 115
**************65544444433333 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (333 nodes)
Target sequences: 50190 (17055200 residues searched)
Passed MSV filter: 4445 (0.0885635); expected 1003.8 (0.02)
Passed bias filter: 827 (0.0164774); expected 1003.8 (0.02)
Passed Vit filter: 66 (0.001315); expected 50.2 (0.001)
Passed Fwd filter: 3 (5.97729e-05); expected 0.5 (1e-05)
Initial search space (Z): 50190 [actual number of targets]
Domain search space (domZ): 3 [number of targets reported over threshold]
# CPU time: 0.42u 0.01s 00:00:00.43 Elapsed: 00:00:00.12
# Mc/sec: 47328.18
//
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