# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/Pox_MCEL.hmm.txt
# target sequence database: proteomes/Xenopus_tropicalis.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: Pox_MCEL [M=333]
Accession: PF03291.15
Description: mRNA capping enzyme
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.7e-126 422.3 0.6 2.1e-126 422.0 0.6 1.0 1 sp|Q28FT4|MCES_XENTR mRNA cap guanine-N7 methyltransferase
------ inclusion threshold ------
0.029 13.9 0.2 0.17 11.4 0.1 2.2 2 tr|B0JZU4|B0JZU4_XENTR Kiaa0859 protein OS=Xenopus tropicali
0.19 11.3 0.0 23 4.4 0.0 2.2 2 tr|F7DL97|F7DL97_XENTR Uncharacterized protein (Fragment) OS
0.27 10.7 0.1 0.6 9.6 0.1 1.6 1 tr|F6ZI67|F6ZI67_XENTR EEF1A lysine methyltransferase 2 OS=X
Domain annotation for each sequence (and alignments):
>> sp|Q28FT4|MCES_XENTR mRNA cap guanine-N7 methyltransferase OS=Xenopus tropicalis OX=8364 GN=rnmt PE=2 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 422.0 0.6 3.4e-130 2.1e-126 5 333 .] 70 404 .. 66 404 .. 0.97
Alignments for each domain:
== domain 1 score: 422.0 bits; conditional E-value: 3.4e-130
Pox_MCEL 5 etesevtdlvathynerpetgellkkRiastiiylrnlnNyiKslLiseyasktkldesnklkvLdldcgkGgDLeKyekgeIsklvat 93
+ e+++ +lv thyne+petg l++R++s+i++lrn+nN++Ks+Li+e+++k+++ ++++++vLdl+cgkGgDL K++kg+Isklv+t
sp|Q28FT4|MCES_XENTR 70 RLEEGHGSLVVTHYNELPETG--LETRSQSRIFHLRNFNNWMKSALIGEFVEKVRQ-RTRNIAVLDLGCGKGGDLLKWRKGGISKLVCT 155
5678999**************..*********************************.9******************************* PP
Pox_MCEL 94 DiaeesieeckeRYnklrsekkskyykFdaelirsdsfvssvrevfedyelkfdivslQFaiHYsFeseekartvlrNvaellasGGkv 182
Dia++s+++c+eRY+ l+++ +++ F+ae++++ds+++ ++e+++d+e+kfdi+s+QF++HYsFe+ e+a+++lrN++e+l++GG++
sp|Q28FT4|MCES_XENTR 156 DIADVSVKQCEERYKDLKRKSRNE-RVFEAEFLTADSTKELLSEKYNDPEIKFDICSCQFVYHYSFETYEQADMMLRNACERLCPGGFF 243
**************5555544443.56************************************************************** PP
Pox_MCEL 183 lgTtpdgdelskltvkklkviekdlpsfgNsiyvvkfeeekievplfGakYeynledvvkdvpEyivkfealvklaeeYgleLvdkkdf 271
+gTtpdg+el vk+l+++ d++sfgN++y+vkfe +k ++plfG+kY+++le+vv +vpE++v+f++lv++a++Y+++L++kk+f
sp|Q28FT4|MCES_XENTR 244 IGTTPDGFEL----VKRLEAS--DTNSFGNDVYTVKFE-KKGKYPLFGCKYDFSLEEVV-NVPEFLVYFPVLVEMAKKYQMKLIYKKTF 324
**********....******9..7*************9.8999****************.***************************** PP
Pox_MCEL 272 aeiieesikke.lkklikrvskleerkstknf.................eelnrsalkstlgkdeeealsyYlvfvfeKr 333
+e++ee++k++ +k+l+kr+++le ++++ nf e+ +++ + +tl+k+e+ea+s+Yl+f+feK+
sp|Q28FT4|MCES_XENTR 325 REFFEEKVKNDeQKMLLKRMKALEPYPAAPNFklvsgrtedyehaqklvENGQVKLPLGTLSKSEWEATSIYLLFAFEKQ 404
**********99*******************************************************************6 PP
>> tr|B0JZU4|B0JZU4_XENTR Kiaa0859 protein OS=Xenopus tropicalis OX=8364 GN=eef1aknmt PE=2 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.4 0.1 2.8e-05 0.17 58 195 .. 49 170 .. 39 177 .. 0.75
2 ? -1.7 0.0 0.28 1.7e+03 167 192 .. 590 615 .. 586 648 .. 0.67
Alignments for each domain:
== domain 1 score: 11.4 bits; conditional E-value: 2.8e-05
Pox_MCEL 58 tkldesnklkvLdldcgkGgDLeKyekgeIsklvatDiaeesieeckeRYnklrsekkskyykFdaelirsdsfvssvrevfedyel 144
+ kvL ++cg+ e+ ++ ++l +D++e+ i++ keR + r+ + +F++ ++ +f s +++ ++
tr|B0JZU4|B0JZU4_XENTR 49 RD-------KVLVVGCGNSELSERLYDAGCQNLTNIDVSEVVIRQMKERN-SSRRPNM----TFQVMDATQTTFDDSYFQTVL-DKG 122
43.......5********998899999**********************7.3344443....488888888888777555443.488 PP
Pox_MCEL 145 kfdivslQFaiHYsFeseekartvlrNvaellasGGkvlgT.tpdgdelskl 195
+d + + + e a+ ++ + +ll+ GG++l + ++++l+kl
tr|B0JZU4|B0JZU4_XENTR 123 TLDAIMTDTD----ERTLETADKMMSEIGRLLTCGGRFLCVsLAQAHVLEKL 170
8888876643....46888999999999999999999996415566666554 PP
== domain 2 score: -1.7 bits; conditional E-value: 0.28
Pox_MCEL 167 tvlrNvaellasGGkvlgTtpdgdel 192
+ l+Nv ++l++ G+++ ++ d +
tr|B0JZU4|B0JZU4_XENTR 590 IFLQNVHKILNPNGVFILNLVCRDAV 615
4799************9988777766 PP
>> tr|F7DL97|F7DL97_XENTR Uncharacterized protein (Fragment) OS=Xenopus tropicalis OX=8364 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 4.4 0.0 0.0037 23 64 84 .. 76 96 .. 66 100 .. 0.83
2 ? 4.4 0.0 0.0037 23 64 84 .. 418 438 .. 408 442 .. 0.83
Alignments for each domain:
== domain 1 score: 4.4 bits; conditional E-value: 0.0037
Pox_MCEL 64 nklkvLdldcgkGgDLeKyek 84
++ ++d+ GgDLeK++k
tr|F7DL97|F7DL97_XENTR 76 EHHVCFAMDYAAGGDLEKWTK 96
5556789************87 PP
== domain 2 score: 4.4 bits; conditional E-value: 0.0037
Pox_MCEL 64 nklkvLdldcgkGgDLeKyek 84
++ ++d+ GgDLeK++k
tr|F7DL97|F7DL97_XENTR 418 EHHVCFAMDYAAGGDLEKWTK 438
5556789************87 PP
>> tr|F6ZI67|F6ZI67_XENTR EEF1A lysine methyltransferase 2 OS=Xenopus tropicalis OX=8364 GN=EEF1AKMT2 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 9.6 0.1 9.9e-05 0.6 63 107 .. 59 103 .. 49 182 .. 0.69
Alignments for each domain:
== domain 1 score: 9.6 bits; conditional E-value: 9.9e-05
Pox_MCEL 63 snklkvLdldcgkGgDLeKyekgeIsklvatDiaeesieeckeRY 107
+++ ++Ld++ g+G L k + +l ++D + +++e +k
tr|F6ZI67|F6ZI67_XENTR 59 PQTASILDIGTGNGMLLVELAKSGYCNLTGIDYSSDAVELAKSIC 103
67889**********************************998766 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (333 nodes)
Target sequences: 24182 (11782085 residues searched)
Passed MSV filter: 1075 (0.0444546); expected 483.6 (0.02)
Passed bias filter: 525 (0.0217104); expected 483.6 (0.02)
Passed Vit filter: 51 (0.00210901); expected 24.2 (0.001)
Passed Fwd filter: 4 (0.000165412); expected 0.2 (1e-05)
Initial search space (Z): 24182 [actual number of targets]
Domain search space (domZ): 4 [number of targets reported over threshold]
# CPU time: 0.31u 0.01s 00:00:00.32 Elapsed: 00:00:00.11
# Mc/sec: 35667.58
//
[ok]