# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/RrnaAD.hmm.txt
# target sequence database: proteomes/Caenorhabditis_elegans.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: RrnaAD [M=265]
Accession: PF00398.19
Description: Ribosomal RNA adenine dimethylase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.3e-60 203.6 0.1 4.4e-60 203.2 0.1 1.1 1 sp|Q09522|DIM1_CAEEL Probable dimethyladenosine transferas
1.7e-43 148.8 0.0 3e-43 148.0 0.0 1.4 2 sp|P91424|TFB1M_CAEEL Dimethyladenosine transferase 1, mito
0.00024 20.4 0.1 0.00028 20.2 0.1 1.1 1 tr|Q9GZF8|Q9GZF8_CAEEL PRotein arginine MethylTransferase OS
0.00031 20.1 0.0 0.00047 19.5 0.0 1.2 1 tr|O02325|O02325_CAEEL PRotein arginine MethylTransferase OS
0.00054 19.3 0.0 0.0017 17.6 0.0 1.7 2 tr|Q17539|Q17539_CAEEL Uncharacterized protein OS=Caenorhabd
0.0017 17.7 0.7 0.0094 15.2 0.0 2.5 3 tr|Q20856|Q20856_CAEEL Histone-lysine N-methyltransferase, H
0.0065 15.7 0.0 0.013 14.7 0.0 1.5 1 tr|H2KZF5|H2KZF5_CAEEL Phosphoethanolamine MethylTransferase
0.0067 15.7 0.0 0.0099 15.1 0.0 1.2 1 tr|Q20794|Q20794_CAEEL Histone-lysine N-methyltransferase, H
0.0091 15.2 0.0 0.019 14.2 0.0 1.5 1 tr|Q22123|Q22123_CAEEL Uncharacterized protein OS=Caenorhabd
------ inclusion threshold ------
0.011 15.0 0.0 0.014 14.7 0.0 1.2 1 sp|Q27873|PIMT_CAEEL Protein-L-isoaspartate O-methyltransf
0.013 14.7 0.0 0.021 14.1 0.0 1.3 1 tr|Q6AW06|Q6AW06_CAEEL Histone-lysine N-methyltransferase, H
0.035 13.3 0.0 0.085 12.1 0.0 1.6 1 tr|Q23200|Q23200_CAEEL Histone-lysine N-methyltransferase, H
0.08 12.2 0.0 0.15 11.3 0.0 1.5 1 tr|K8ERZ6|K8ERZ6_CAEEL Uncharacterized protein OS=Caenorhabd
0.082 12.1 0.0 0.13 11.4 0.0 1.3 1 tr|Q2MDF2|Q2MDF2_CAEEL Methyltransferase-like protein OS=Cae
Domain annotation for each sequence (and alignments):
>> sp|Q09522|DIM1_CAEEL Probable dimethyladenosine transferase OS=Caenorhabditis elegans OX=6239 GN=E02H1.1 PE=3 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 203.2 0.1 3.1e-63 4.4e-60 4 225 .. 24 236 .. 22 272 .. 0.95
Alignments for each domain:
== domain 1 score: 203.2 bits; conditional E-value: 3.1e-63
CXXGCG--EE--HHHHHHHHHHH-GGTTSEEEEES-TTTCCHHHHHCC-SEEEEE-S-HHHHHHHHCHTT...TCCCEEEE-S-CCGHH CS
RrnaAD 4 lrksygqnflknkkvineIldklnleekltvleigpGkGilTeeLakrakqvvvlElderLakllqkkls...kdeklkvvhqDflkfe 89
++++ gq++lkn+ v+n I++k+ l+ ++tvle+gpG+G+lT+++++ ak v + E+d+r++++++k++ +++kl+v D++k+e
sp|Q09522|DIM1_CAEEL 24 FNTDKGQHILKNPGVVNAIVEKSALKATDTVLEVGPGTGNLTVKMLEVAKTVIACEIDPRMIAEVKKRVMgtpLQNKLQVNGGDVMKME 112
68999****************************************************************99999*************** PP
HHHHHCTTTCCCCEEEEEEE--TTTHHHHHHHHHHGGGGCEEEEEEEEEHHHHHHHH--TTSTT-SHHHHHHHHHEEEEEEEEC-GGCE CS
RrnaAD 90 tpeevtekdsihqeflvvanlPyeistqlvkqlleesrfglvkmllwlqkefarrllarpgskkrsrlsvlreaftdvklvakveksif 178
p + +vanlPy+is+++v +ll ++r+ ++++l++qkefa rl+arpg+k++srlsv++++++ v++++kv ++ f
sp|Q09522|DIM1_CAEEL 113 WPFFD----------VCVANLPYQISSPFVQKLL-LHRPLPRYAVLMFQKEFADRLVARPGDKDYSRLSVNVQLLAKVEMLMKVKRTEF 190
99977..........7******************.788888************************************************ PP
CS--SSSEEEEEEEE-SS-S--S-HHHHHHHHHHHHCTTTSBCCCHC CS
RrnaAD 179 sPppkvdsalvelerkdedlpqkdlkkyesvvrkllnrkrktlstsl 225
+Pppkvdsa+v++ +k+++ p ++ ++e ++r ++ rk+ktl + +
sp|Q09522|DIM1_CAEEL 191 RPPPKVDSAVVRIAPKNPP-PPVNFVEWEGLLRLCFMRKNKTLMAIF 236
******************9.7889999***************98754 PP
>> sp|P91424|TFB1M_CAEEL Dimethyladenosine transferase 1, mitochondrial OS=Caenorhabditis elegans OX=6239 GN=tfbm-1 PE=
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 148.0 0.0 2.1e-46 3e-43 3 254 .. 23 287 .. 21 307 .. 0.92
2 ? -3.2 0.1 2.6 3.8e+03 177 187 .. 345 355 .. 328 355 .. 0.77
Alignments for each domain:
== domain 1 score: 148.0 bits; conditional E-value: 2.1e-46
CCXXGCG--EE--HHHHHHHHHHH-GGTTSEEEEES-TTTCCHHHHHCC-.SEEEEE-S-HHHHHHHHCHTT.TCCCEEEE-S-CCGH CS
RrnaAD 3 klrksygqnflknkkvineIldklnleekltvleigpGkGilTeeLakra.kqvvvlElderLakllqkkls.kdeklkvvhqDflkf 88
+++k ++qn+l + ++ +I +++++ ek+ v+eigpG+G T+ +++ + v+E+d+r++ +lq+ + d+++ + hqD+l +
sp|P91424|TFB1M_CAEEL 23 RAKKILSQNYLMDMNITRKIAKHAKVIEKDWVIEIGPGPGGITRAILEAGaSRLDVVEIDNRFIPPLQHLAEaADSRMFIHHQDALRT 110
678899****************************************998879*****************88899************** PP
HHHHHHCT..........TTCCCCEEEEEEE--TTTHHHHHHHHHH.......GGGGCEEEEEEEEEHHHHHHHH--TTSTT-SHHHH CS
RrnaAD 89 etpeevte..........kdsihqeflvvanlPyeistqlvkqlle.......esrfglvkmllwlqkefarrllarpgskkrsrlsv 159
e+ + +ds + v++nlP +i ++l+ ++l + g+v +l +q e+a+rl+++ rsr+s+
sp|P91424|TFB1M_CAEEL 111 EIGDIWKNetarpesvdwHDSNLPAMHVIGNLPFNIASPLIIKYLRdmsyrrgVWQYGRVPLTLTFQLEVAKRLCSPIACDTRSRISI 198
****77779*******999999999***********************99999777789***************************** PP
HHHHHEEEEEEEEC-GGCECS--SSSEEEEEEEE-SS-S--S-HHHHHHHHHHHHCTTTSBCCCHCCCTSTCHHHHHCTT.T--TTTC CS
RrnaAD 160 lreaftdvklvakveksifsPppkvdsalvelerkdedlpqkdlkkyesvvrkllnrkrktlstslksllpggelqalsstgindnal 247
+++++++ k+v ++ s+f P p+vd +v+ +++++l + + +++e+v+r+++ ++k + + lk+l+p++ + ls+ +l
sp|P91424|TFB1M_CAEEL 199 MSQYVAEPKMVFQISGSCFVPRPQVDVGVVRFVPRKTPLVNTSFEVLEKVCRQVFHYRQKYVTKGLKTLYPEELEDELSD------DL 280
*************************************9999******************************999887755......33 PP
CCCSGHH CS
RrnaAD 248 vkklsae 254
+kk++++
sp|P91424|TFB1M_CAEEL 281 LKKCRID 287
4444433 PP
== domain 2 score: -3.2 bits; conditional E-value: 2.6
CECS--SSSEE CS
RrnaAD 177 ifsPppkvdsa 187
if P p++dsa
sp|P91424|TFB1M_CAEEL 345 IFAPAPTIDSA 355
9********97 PP
>> tr|Q9GZF8|Q9GZF8_CAEEL PRotein arginine MethylTransferase OS=Caenorhabditis elegans OX=6239 GN=prmt-4 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 20.2 0.1 1.9e-07 0.00028 28 96 .. 36 104 .. 13 125 .. 0.82
Alignments for each domain:
== domain 1 score: 20.2 bits; conditional E-value: 1.9e-07
GGTTSEEEEES-TTTCCHHHHHCC-.SEEEEE-S-HHHHHHHHCHTTTCCCEEEE-S-CCGHHHHHHHCT CS
RrnaAD 28 leekltvleigpGkGilTeeLakra.kqvvvlElderLakllqkklskdeklkvvhqDflkfetpeevte 96
l ++++vl+ig G G+ ++ +++ ++vv + + +++++ ++ +++e++ h ++ +f++ e+ +
tr|Q9GZF8|Q9GZF8_CAEEL 36 L-KDKKVLDIGCGNGLNSTTFLQWGaRKVVGFDNSQEMIENCKNLHKSSEQSSFHHLNVTDFQLDEKFHV 104
3.6789***************88877******************999****************9996655 PP
>> tr|O02325|O02325_CAEEL PRotein arginine MethylTransferase OS=Caenorhabditis elegans OX=6239 GN=prmt-9 PE=1 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 19.5 0.0 3.3e-07 0.00047 32 94 .. 168 233 .. 146 283 .. 0.80
Alignments for each domain:
== domain 1 score: 19.5 bits; conditional E-value: 3.3e-07
SEEEEES-TTTCCHHHHHCC-SEEEEE-S-HHHHHHHHCHTT...TCCCEEEE-S-CCGHHHHHHH CS
RrnaAD 32 ltvleigpGkGilTeeLakrakqvvvlElderLakllqkkls...kdeklkvvhqDflkfetpeev 94
+ v +ig+G+Gil+++ a + v++lE L + ++ l+ +++++v ++ +fet e++
tr|O02325|O02325_CAEEL 168 TVVFDIGSGTGILSAIAARKTNLVTALEENMCLTMISKEVLKrngVESRVNVHAKNSTYFETCEKA 233
6799***********************************9999999****************9944 PP
>> tr|Q17539|Q17539_CAEEL Uncharacterized protein OS=Caenorhabditis elegans OX=6239 GN=C01B10.8 PE=1 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -2.4 0.0 1.6 2.2e+03 20 49 .. 37 65 .. 22 67 .. 0.77
2 ! 17.6 0.0 1.2e-06 0.0017 31 86 .. 459 517 .. 448 534 .. 0.86
Alignments for each domain:
== domain 1 score: -2.4 bits; conditional E-value: 1.6
HHHHHHH-GGTTSEEEEES-TTTCCHHHHH CS
RrnaAD 20 neIldklnleekltvleigpGkGilTeeLa 49
+++dk +l++k+t l +g G l ++L
tr|Q17539|Q17539_CAEEL 37 SNVIDK-YLKPKDTFLQLGCGNSELATQLY 65
555555.69999999999999999999885 PP
== domain 2 score: 17.6 bits; conditional E-value: 1.2e-06
TSEEEEES-TTTCCHHHHHCC-..SEEEEE-S-HHHHHHHHCHTT...TCCCEEEE-S-CC CS
RrnaAD 31 kltvleigpGkGilTeeLakra..kqvvvlElderLakllqkkls...kdeklkvvhqDfl 86
k+ vl g G G+lT+ L+ + +v+++Eld++ +k+ + ++s +d ++ vv qD+l
tr|Q17539|Q17539_CAEEL 459 KMAVL--GLGGGLLTAYLVRHFkkAHVTAVELDPEVLKIANSHFSfphSDARIDVVIQDAL 517
45554..567889*********86689*******************99***********87 PP
>> tr|Q20856|Q20856_CAEEL Histone-lysine N-methyltransferase, H3 lysine-79 specific OS=Caenorhabditis elegans OX=6239 G
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -2.4 0.0 1.5 2.2e+03 207 240 .. 15 48 .. 6 87 .. 0.76
2 ! 15.2 0.0 6.5e-06 0.0094 19 148 .. 165 308 .. 160 329 .. 0.74
3 ? -1.4 0.1 0.79 1.1e+03 66 92 .. 354 378 .. 345 382 .. 0.73
Alignments for each domain:
== domain 1 score: -2.4 bits; conditional E-value: 1.5
HHHHHHHHCTTTSBCCCHCCCTSTCHHHHHCTT. CS
RrnaAD 207 esvvrkllnrkrktlstslksllpggelqalsst 240
+++ +k+l+ + l + l++++p+g+ ++ s+
tr|Q20856|Q20856_CAEEL 15 DKIESKMLEDETDLLHETLSTVFPNGKSIKFDSH 48
5666777777777888888888888877777665 PP
== domain 2 score: 15.2 bits; conditional E-value: 6.5e-06
HHHHHHHH-GGTTSEEEEES-TTTCCHHHHHCC-..SEEEEE-S-HHHHHHHHCHTT...........TCCCEEEE-S-CCGHHHHH CS
RrnaAD 19 ineIldklnleekltvleigpGkGilTeeLakra..kqvvvlElderLakllqkkls...........kdeklkvvhqDflkfetpe 92
i +I+d+l+l+ ++ +++g+G G l +a ++ k+ v +El ++ a+ + +++ +++++ Dfl ++
tr|Q20856|Q20856_CAEEL 165 IGSIVDELKLNSSDVFVDLGSGIGQLVCFVAAYSkvKKAVGIELSSVPAEYAVSQGMyfknlmtffdkQHGEIELIQGDFLHPQFHD 251
568******************************999*******998766543222111234445668999***************** PP
HHCTTTCCCCEEEEEEE--T..TTHHHHHHHHHH....GGGGCEEEEEEEEEHHHHHHHH-- CS
RrnaAD 93 evtekdsihqeflvvanlPy..eistqlvkqlle....esrfglvkmllwlqkefarrllar 148
+ ++ +++ n ++ +v+ ll+ r+ ++ l l++++a r+ a
tr|Q20856|Q20856_CAEEL 252 LIC----KEATVIFINNYAFedDLTRRIVFELLQncadGTRI-VSAKPLSLPRSVASRRHAM 308
775....55666666666665567777777777755424444.5667799999999998773 PP
== domain 3 score: -1.4 bits; conditional E-value: 0.79
HHHHCHTTTCCCEEEE-S-CCGHHHHH CS
RrnaAD 66 kllqkklskdeklkvvhqDflkfetpe 92
k+ +k s ++k+k v +Df k+++++
tr|Q20856|Q20856_CAEEL 354 KESKK--SANSKVKKVGKDFTKTSLKN 378
44444..5678888899**99999887 PP
>> tr|H2KZF5|H2KZF5_CAEEL Phosphoethanolamine MethylTransferase OS=Caenorhabditis elegans OX=6239 GN=pmt-1 PE=1 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 14.7 0.0 9.1e-06 0.013 21 78 .. 65 122 .. 61 162 .. 0.79
Alignments for each domain:
== domain 1 score: 14.7 bits; conditional E-value: 9.1e-06
HHHHHH-GGTTSEEEEES-TTTCCHHHHHCC-SEEEEE-S-HHHHHHHHCHTTTCCCE CS
RrnaAD 21 eIldklnleekltvleigpGkGilTeeLakrakqvvvlElderLakllqkklskdekl 78
+Il l l ++ v++ig+G G +T+ La+ a+ v + +++k q++ +++
tr|H2KZF5|H2KZF5_CAEEL 65 DILASLPLLHNKDVVDIGAGIGRFTTVLAETARWVLSTDFIDSFIKKNQERNAHLGNI 122
689999999***********************99988888888888777765555555 PP
>> tr|Q20794|Q20794_CAEEL Histone-lysine N-methyltransferase, H3 lysine-79 specific OS=Caenorhabditis elegans OX=6239 G
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 15.1 0.0 6.9e-06 0.0099 17 70 .. 133 188 .. 129 227 .. 0.91
Alignments for each domain:
== domain 1 score: 15.1 bits; conditional E-value: 6.9e-06
HHHHHHHHHH-GGTTSEEEEES-TTTCCHHHHHCC-..SEEEEE-S-HHHHHHHHC CS
RrnaAD 17 kvineIldklnleekltvleigpGkGilTeeLakra..kqvvvlElderLakllqk 70
+++ +d+ln+ +++ +++g+G+G l +a +a k+ v +E+ ++La++ ++
tr|Q20794|Q20794_CAEEL 133 EQMASFVDELNIGPNDHFMDLGSGVGQLVSFVAAYAqtKKSVGVEIMPNLAQMARA 188
5678899********************************************99887 PP
>> tr|Q22123|Q22123_CAEEL Uncharacterized protein OS=Caenorhabditis elegans OX=6239 GN=CELE_T03G11.6 PE=1 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 14.2 0.0 1.3e-05 0.019 29 84 .. 105 162 .. 76 174 .. 0.74
Alignments for each domain:
== domain 1 score: 14.2 bits; conditional E-value: 1.3e-05
G.TTSEEEEES-TTTCCHHHHHCC-SEEEEE-S-HHHHHHHHCHTT.TCCCEEEE-S- CS
RrnaAD 29 e.ekltvleigpGkGilTeeLakrakqvvvlElderLakllqkkls.kdeklkvvhqD 84
+ +++vl++g+G G Te++ +++v + El +++ ++l+ k + l++ ++D
tr|Q22123|Q22123_CAEEL 105 NsTDKKVLDLGAGNGDITEHMRPFFEHVYATELSSKMRNRLSWKGYnVLSALEWAETD 162
257889********************************99986533366666666666 PP
>> sp|Q27873|PIMT_CAEEL Protein-L-isoaspartate O-methyltransferase OS=Caenorhabditis elegans OX=6239 GN=pcm-1 PE=2 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 14.7 0.0 9.5e-06 0.014 32 85 .. 80 143 .. 61 218 .. 0.78
Alignments for each domain:
== domain 1 score: 14.7 bits; conditional E-value: 9.5e-06
SEEEEES-TTTCCHHHHHCC-...SEEEEE-S-HHHHHHHHCHTT.......TCCCEEEE-S-C CS
RrnaAD 32 ltvleigpGkGilTeeLakra...kqvvvlElderLakllqkkls.......kdeklkvvhqDf 85
+ l++g+G G lT+ +a ++ vv +E ++L++l +k+++ + +++ +++ D+
sp|Q27873|PIMT_CAEEL 80 AKALDVGSGSGYLTVCMAMMVgrnGTVVGIEHMPQLVELSEKNIRkhhseqlERGNVIIIEGDG 143
5679****************9965568889************9995544444445555566655 PP
>> tr|Q6AW06|Q6AW06_CAEEL Histone-lysine N-methyltransferase, H3 lysine-79 specific OS=Caenorhabditis elegans OX=6239 G
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 14.1 0.0 1.5e-05 0.021 13 96 .. 175 271 .. 162 328 .. 0.75
Alignments for each domain:
== domain 1 score: 14.1 bits; conditional E-value: 1.5e-05
E--HHHHHHHHHHH-GGTTSEEEEES-TTTCCHHHHHCC-..SEEEEE-S-HH...HHHHHHCHTT........TCCCEEEE-S-CC CS
RrnaAD 13 lknkkvineIldklnleekltvleigpGkGilTeeLakra..kqvvvlElder...Lakllqkkls........kdeklkvvhqDfl 86
++n+ + +I+d+ln+ +++ +++g+G G l a +a k+ v +El ++ +a+ l ++ +++k + ++ Dfl
tr|Q6AW06|Q6AW06_CAEEL 175 ETNPEQLISIIDELNIGPQDVFVDLGSGIGQLVCLTAAYAkcKKSVGIELSQVpsnFAQDLAGYFKkfmshfgkNHGKFEHIQGDFL 261
58999999**********************99887788888899*****98751114444433333555688888899999999999 PP
GHHHHHHHCT CS
RrnaAD 87 kfetpeevte 96
+ ++++ + e
tr|Q6AW06|Q6AW06_CAEEL 262 NPKFKQLICE 271
9998887766 PP
>> tr|Q23200|Q23200_CAEEL Histone-lysine N-methyltransferase, H3 lysine-79 specific OS=Caenorhabditis elegans OX=6239 G
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 12.1 0.0 5.9e-05 0.085 19 73 .. 134 190 .. 131 210 .. 0.84
Alignments for each domain:
== domain 1 score: 12.1 bits; conditional E-value: 5.9e-05
HHHHHHHH-GGTTSEEEEES-TTTCCHHHHHCC-..SEEEEE-S-HHHHHHHHCHTT CS
RrnaAD 19 ineIldklnleekltvleigpGkGilTeeLakra..kqvvvlElderLakllqkkls 73
+++ +d+ln+ +++ +++g+G G+l + +a +a + v +El +La++ +k+ +
tr|Q23200|Q23200_CAEEL 134 MASFVDQLNMGPSDYFMDLGSGIGHLVNFVAAYArtQMSVGVELMDNLAEIAEKNKE 190
66789*****************************85556779*99999999988554 PP
>> tr|K8ERZ6|K8ERZ6_CAEEL Uncharacterized protein OS=Caenorhabditis elegans OX=6239 GN=CELE_F13D12.9 PE=1 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.3 0.0 0.0001 0.15 18 47 .. 224 253 .. 220 315 .. 0.84
Alignments for each domain:
== domain 1 score: 11.3 bits; conditional E-value: 0.0001
HHHHHHHHH-GGTTSEEEEES-TTTCCHHH CS
RrnaAD 18 vineIldklnleekltvleigpGkGilTee 47
i++ +d+l+l+ ++ vleig G G+ +
tr|K8ERZ6|K8ERZ6_CAEEL 224 KIDRLIDQLELKADDHVLEIGCGWGAAAIR 253
6899********************997655 PP
>> tr|Q2MDF2|Q2MDF2_CAEEL Methyltransferase-like protein OS=Caenorhabditis elegans OX=6239 GN=metl-2 PE=1 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.4 0.0 9.2e-05 0.13 24 51 .. 110 138 .. 87 145 .. 0.73
Alignments for each domain:
== domain 1 score: 11.4 bits; conditional E-value: 9.2e-05
HHH-GG.TTSEEEEES-TTTCCHHHHHCC CS
RrnaAD 24 dklnle.ekltvleigpGkGilTeeLakr 51
d++nl+ ek ++le+g G+G++T +L++
tr|Q2MDF2|Q2MDF2_CAEEL 110 DESNLQkEKIEILEVGCGVGNTTFPLLQV 138
55666699***************999875 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (265 nodes)
Target sequences: 20008 (8229220 residues searched)
Passed MSV filter: 630 (0.0314874); expected 400.2 (0.02)
Passed bias filter: 386 (0.0192923); expected 400.2 (0.02)
Passed Vit filter: 58 (0.00289884); expected 20.0 (0.001)
Passed Fwd filter: 14 (0.00069972); expected 0.2 (1e-05)
Initial search space (Z): 20008 [actual number of targets]
Domain search space (domZ): 14 [number of targets reported over threshold]
# CPU time: 0.19u 0.01s 00:00:00.20 Elapsed: 00:00:00.07
# Mc/sec: 31153.48
//
[ok]