# hmmsearch :: search profile(s) against a sequence database # HMMER 3.1b2 (February 2015); http://hmmer.org/ # Copyright (C) 2015 Howard Hughes Medical Institute. # Freely distributed under the GNU General Public License (GPLv3). # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query HMM file: pfam_list/RrnaAD.hmm.txt # target sequence database: proteomes/Xenopus_tropicalis.fasta # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: RrnaAD [M=265] Accession: PF00398.19 Description: Ribosomal RNA adenine dimethylase Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.8e-66 223.8 0.0 3.2e-66 223.5 0.0 1.1 1 tr|K9J875|K9J875_XENTR rRNA adenine N(6)-methyltransfer 4.9e-41 141.0 0.0 6.2e-41 140.7 0.0 1.1 1 sp|Q28HM1|TFB1M_XENTR Dimethyladenosine transferase 1, 3.5e-18 66.1 0.0 5e-18 65.5 0.0 1.1 1 tr|F6YI97|F6YI97_XENTR rRNA adenine N(6)-methyltransfer 3.6e-07 30.0 0.0 1.7e-05 24.4 0.0 2.2 2 tr|F7DZT0|F7DZT0_XENTR Uncharacterized protein OS=Xenop 0.0011 18.5 0.0 0.0022 17.6 0.0 1.4 1 tr|B1H336|B1H336_XENTR LOC100145545 protein OS=Xenopus 0.0011 18.5 0.0 0.0018 17.8 0.0 1.2 1 tr|F7DC17|F7DC17_XENTR Uncharacterized protein (Fragmen 0.0024 17.4 0.0 0.0041 16.7 0.0 1.3 1 tr|F6X6L6|F6X6L6_XENTR Methyltransferase-like 22 OS=Xen 0.0038 16.8 0.0 0.0063 16.0 0.0 1.3 1 tr|F6PSG1|F6PSG1_XENTR Methyltransferase-like 15 OS=Xen ------ inclusion threshold ------ 0.055 13.0 0.2 0.055 13.0 0.2 1.0 1 tr|A0A1B8XYZ8|A0A1B8XYZ8_XENTR Uncharacterized protein (Fragmen 0.068 12.7 0.0 0.13 11.8 0.0 1.4 1 sp|B0JYW5|ANM6_XENTR Protein arginine N-methyltransfe 0.078 12.5 0.0 1.4 8.4 0.0 2.2 2 sp|Q5BKM6|NDUF7_XENTR Protein arginine methyltransfera 0.087 12.3 0.0 0.12 11.8 0.0 1.2 1 tr|F6XHA2|F6XHA2_XENTR Protein-L-isoaspartate O-methylt 0.09 12.2 0.0 0.15 11.5 0.0 1.3 1 sp|Q6PBF6|GAMT_XENTR Guanidinoacetate N-methyltransfe 0.18 11.3 0.0 0.27 10.7 0.0 1.2 1 tr|F7CVL8|F7CVL8_XENTR Methyltransferase-like 9 OS=Xeno Domain annotation for each sequence (and alignments): >> tr|K9J875|K9J875_XENTR rRNA adenine N(6)-methyltransferase OS=Xenopus tropicalis OX=8364 GN=dimt1 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 223.5 0.0 1.9e-69 3.2e-66 4 239 .. 30 256 .. 27 277 .. 0.94 Alignments for each domain: == domain 1 score: 223.5 bits; conditional E-value: 1.9e-69 CXXGCG--EE--HHHHHHHHHHH-GGTTSEEEEES-TTTCCHHHHHCC-SEEEEE-S-HHHHHHHHCHTT...TCCCEEEE-S-CCG CS RrnaAD 4 lrksygqnflknkkvineIldklnleekltvleigpGkGilTeeLakrakqvvvlElderLakllqkkls...kdeklkvvhqDflk 87 +++ +gq++lkn+ ++n+I+dk+ +++++ vle+gpG+G++T +L++ ak vv+ Eld+rL+++lqk+++ ++kl+v+ D+lk tr|K9J875|K9J875_XENTR 30 FNTGLGQHILKNPLIVNSIIDKAAIRPTDVVLEVGPGTGNMTMKLLEKAKRVVACELDTRLVAELQKRVQgsaVASKLQVMVGDVLK 116 78999*****************************************************************9999************* PP HHHHHHHCTTTCCCCEEEEEEE--TTTHHHHHHHHHHGGGGCEEEEEEEEEHHHHHHHH--TTSTT-SHHHHHHHHHEEEEEEEEC- CS RrnaAD 88 fetpeevtekdsihqeflvvanlPyeistqlvkqlleesrfglvkmllwlqkefarrllarpgskkrsrlsvlreaftdvklvakve 174 +++p + l+vanlPy+is+++v++ll ++r+ ++ ++l++q+efa rl+a+pg+k+++rls+++++++ v +++kv+ tr|K9J875|K9J875_XENTR 117 TDLPFFD----------LCVANLPYQISSPFVFKLL-LHRPFFRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHIMKVG 192 *****77..........9******************.788889******************************************** PP GGCECS--SSSEEEEEEEE-SS-S--S-HHHHHHHHHHHHCTTTSBCCCHCCCTSTCHHHHHCTT CS RrnaAD 175 ksifsPppkvdsalvelerkdedlpqkdlkkyesvvrkllnrkrktlstslksllpggelqalss 239 k++f+Pppkv+s++v++e+k+++ p + ++++ +vr++++rk+ktl +++ks+ ++ l+++++ tr|K9J875|K9J875_XENTR 193 KNNFRPPPKVESSVVRIEPKNPP-PPINFQEWDGLVRIAFVRKNKTLAAAFKSTAVQELLEKNYK 256 **********************8.89**************************9999998888866 PP >> sp|Q28HM1|TFB1M_XENTR Dimethyladenosine transferase 1, mitochondrial OS=Xenopus tropicalis OX=8364 GN=tfb1m PE=2 SV= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 140.7 0.0 3.6e-44 6.2e-41 3 242 .. 28 283 .. 26 303 .. 0.89 Alignments for each domain: == domain 1 score: 140.7 bits; conditional E-value: 3.6e-44 CCXXGCG--EE--HHHHHHHHHHH-GGTTSEEEEES-TTTCCHHHHHCC-.SEEEEE-S-HHHHHHHHCHTT.TCCCEEEE-S-CCGH CS RrnaAD 3 klrksygqnflknkkvineIldklnleekltvleigpGkGilTeeLakra.kqvvvlElderLakllqkkls.kdeklkvvhqDflkf 88 ++ k+++qnfl + k+ ++I++k+ ++ v e+gpG+G T+++++ +++ v+E+d+r++ l+ + +++k+++vh D+l++ sp|Q28HM1|TFB1M_XENTR 28 RAEKQLSQNFLLDLKLTDKIVRKAGNLQNAYVCEVGPGPGGITRSILNAGvEELLVVEKDTRFIPGLKMLNEaSSGKVQIVHGDILTY 115 67899*******************9999****************9977766*************9999955589***********998 PP HHHHHHCT.....TTCCCCEEEEEEE--TTTHHHHHHHHHH.......GGGGCEEEEEEEEEHHHHHHHH--TTSTT-SHHHHHHHHH CS RrnaAD 89 etpeevte.....kdsihqeflvvanlPyeistqlvkqlle.......esrfglvkmllwlqkefarrllarpgskkrsrlsvlreaf 164 + + d + + +++nlP +st+l+ ++le + g+ +m+l +qke+a+rl+a+ +sk+rsrls++++ + sp|Q28HM1|TFB1M_XENTR 116 RMDRAFPKhlkkpWDDDPPNVHIIGNLPFSVSTPLIIKWLEqladrtgPFTYGRTQMTLTFQKEVAERLTASTSSKQRSRLSIMAQNL 203 77665555666687888899***********************999886777899********************************* PP EEEEEEEEC-GGCECS--SSSEEEEEEEE-SS-S--S-HHHHHHHHHHHHCTTTSBCCCHCCCTSTCHHHHHCTT...T- CS RrnaAD 165 tdvklvakveksifsPppkvdsalvelerkdedlpqkdlkkyesvvrkllnrkrktlstslksllpggelqalsst..gi 242 ++vk +++ ++f P+p+vd +v ++ ++ ++ k+ e+vvr ++ +rk + l+p++ + + +++ ++ sp|Q28HM1|TFB1M_XENTR 204 CNVKNCFTIPGRAFVPKPEVDVGVVHFTPFIQPKIEQPFKVVEKVVRSVFQFRRKYCHHGVSILFPEESRLKCTEQmlRL 283 ****************************966643477899*****************************99998863333 PP >> tr|F6YI97|F6YI97_XENTR rRNA adenine N(6)-methyltransferase OS=Xenopus tropicalis OX=8364 GN=tfb2m PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 65.5 0.0 2.9e-21 5e-18 38 263 .. 67 338 .. 30 339 .. 0.89 Alignments for each domain: == domain 1 score: 65.5 bits; conditional E-value: 2.9e-21 S-TTTCCHHHHHCC-SEEEEE-S-HHHHHHHHCHTT..TCCCEEEE-S-CCGHHHHHHHCT...................TTCCCCE CS RrnaAD 38 gpGkGilTeeLakrakqvvvlElderLakllqkkls..kdeklkvvhqDflkfetpeevte...................kdsihqe 103 pG+GilT+ L+ vv+lE+ ++++ +lq l+ d++l+vvh+Df k + t + + tr|F6YI97|F6YI97_XENTR 67 EPGPGILTQTLLAAGARVVALESNKDFLPSLQL-LEnnMDGQLEVVHCDFFKLDPLGHGTMqppvmyssvlfnslcipeaPWIKDVP 152 49******************************9.44589***************99876668999999**********98666778* PP EEEEEE--T.TTHHHHHHHHHH......GGGGCEEEEEEEEEHHHHHHHH--TT.STT-SHHHHHHHHHEEEEEEEEC-GG...... CS RrnaAD 104 flvvanlPy.eistqlvkqlle......esrfglvkmllwlqkefarrllarpg.skkrsrlsvlreaftdvklvakveks...... 176 f+v++ lP + st l kq+ + +r g+ + + + ++ + +l+++pg ++++++ls l +a +d++l+ + s tr|F6YI97|F6YI97_XENTR 153 FKVFGILPQkNESTFLWKQIYNlfernsIYRYGRIELNVFISEKQYTKLVSQPGdMRNYQALSALFQASCDIQLLHMEPWSsfltpl 239 *********999********9999***99************************95689*****************9999999***** PP ...........CECS--SSSEEEEEEEE-SS-S.--...S-HHHHHHHHHHHHCTTTSBCCCHCCCTSTCHHHHHCTT.T--TTTCC CS RrnaAD 177 ...........ifsPppkvdsalvelerkdedl.pq...kdlkkyesvvrkllnrkrktlstslksllpggelqalsstgindnalv 248 i P + + lv+++++ + + ++ + + +v+++l +++ +l l+s pg+ +++l + + ++ + tr|F6YI97|F6YI97_XENTR 240 rfkgaaiprsvI-VP--NDHLCLVRITPRRDLFtDSltrENGNTFIVMVKQCLGKRKAKLVDRLNSWDPGNGHKLLRQLALPEDIQT 323 ******998843.55..5889********98776651115678899***********************999999966699999999 PP CCSGHHHHHHHHHHH CS RrnaAD 249 kklsaeqtldifkel 263 +++s+eq+ ++f+++ tr|F6YI97|F6YI97_XENTR 324 GNVSPEQYKQLFEIM 338 ************997 PP >> tr|F7DZT0|F7DZT0_XENTR Uncharacterized protein OS=Xenopus tropicalis OX=8364 GN=loc100124841 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 24.4 0.0 1e-08 1.7e-05 31 94 .. 51 114 .. 37 138 .. 0.90 2 ? 3.0 0.0 0.034 58 20 42 .. 269 291 .. 265 297 .. 0.90 Alignments for each domain: == domain 1 score: 24.4 bits; conditional E-value: 1e-08 TSEEEEES-TTTCCHHHHHCC-SEEEEE-S-HHHHHHHHCHTTTCCCEEEE-S-CCGHHHHHHH CS RrnaAD 31 kltvleigpGkGilTeeLakrakqvvvlElderLakllqkklskdeklkvvhqDflkfetpeev 94 vle+g+G G T +Lak a +v+++ +++++ qk ++++ +++D+ + ++p+e tr|F7DZT0|F7DZT0_XENTR 51 GHSVLELGAGIGRYTGHLAKLASHVTAVDFMQNFIEKNQKDNGFRGNITFLQADVTNLDLPNES 114 568*************************************8889***************99964 PP == domain 2 score: 3.0 bits; conditional E-value: 0.034 HHHHHHH-GGTTSEEEEES-TTT CS RrnaAD 20 neIldklnleekltvleigpGkG 42 +e ++ lnl++ + v+++g G G tr|F7DZT0|F7DZT0_XENTR 269 KEFISMLNLRPGQRVVDVGCGIG 291 677899***************98 PP >> tr|B1H336|B1H336_XENTR LOC100145545 protein OS=Xenopus tropicalis OX=8364 GN=trmt2a PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.6 0.0 1.2e-06 0.0022 17 62 .. 424 469 .. 412 488 .. 0.88 Alignments for each domain: == domain 1 score: 17.6 bits; conditional E-value: 1.2e-06 HHHHHHHHHH-GGTTSEEEEES-TTTCCHHHHHCC-SEEEEE-S-H CS RrnaAD 17 kvineIldklnleekltvleigpGkGilTeeLakrakqvvvlElde 62 ++ I d ++l +++tvl++ G+G +Lak +k+vv +El + tr|B1H336|B1H336_XENTR 424 VLYSAIADWAQLDQNTTVLDVCCGTGTIGISLAKKVKKVVGIELCQ 469 67899**************************************855 PP >> tr|F7DC17|F7DC17_XENTR Uncharacterized protein (Fragment) OS=Xenopus tropicalis OX=8364 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.8 0.0 1e-06 0.0018 32 70 .. 13 52 .. 6 89 .. 0.85 Alignments for each domain: == domain 1 score: 17.8 bits; conditional E-value: 1e-06 SEEEEES-TTTCCHHHH.HCC-SEEEEE-S-HHHHHHHHC CS RrnaAD 32 ltvleigpGkGilTeeL.akrakqvvvlElderLakllqk 70 +v++ig+G+G+l++ L + + +v+++E d++L+ + k tr|F7DC17|F7DC17_XENTR 13 EQVVDIGSGQGHLSRFLsFGQGLSVTAVEADKHLVTMAAK 52 79***************88899*************98877 PP >> tr|F6X6L6|F6X6L6_XENTR Methyltransferase-like 22 OS=Xenopus tropicalis OX=8364 GN=mettl22 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.7 0.0 2.4e-06 0.0041 21 128 .. 173 302 .. 168 321 .. 0.80 Alignments for each domain: == domain 1 score: 16.7 bits; conditional E-value: 2.4e-06 HHHHHH-GGTTSEEEEES-TTTCCHHHHHCC-SEE..EEE-S-HHHHHHHHCHTT........TCCCEEEE-S-CCGHHHHHHHCT. CS RrnaAD 21 eIldklnleekltvleigpGkGilTeeLakrakqv..vvlElderLakllqkkls........kdeklkvvhqDflkfetpeevte. 96 Il + ++ + tvle+g+G+G+++ ++a +ak v +vl e+L+++ + ++s ++k+ v + D k ++ e+++ tr|F6X6L6|F6X6L6_XENTR 173 YILWQPDPFRDCTVLELGAGTGFTSIIMAMIAKTVycTVLDVGEDLLEMCKRNVSlnkyltesIGSKVIVKQLDWFKDNFSEDLESp 259 566666777889********************8765699**********99999977777666667777778899999999988889 PP .........TTCCCCEEEEEEE--T..TTHHHHHHHHHHGGGG CS RrnaAD 97 .........kdsihqeflvvanlPy..eistqlvkqlleesrf 128 + +h +++a + y i+ +l+k l s+ tr|F6X6L6|F6X6L6_XENTR 260 yswtendiaDLYDHMTVIIAADVIYddDITDALFKTLYRISHS 302 9999998888888888999999988777888888887764444 PP >> tr|F6PSG1|F6PSG1_XENTR Methyltransferase-like 15 OS=Xenopus tropicalis OX=8364 GN=mettl15 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.0 0.0 3.6e-06 0.0063 16 69 .. 47 102 .. 41 115 .. 0.78 Alignments for each domain: == domain 1 score: 16.0 bits; conditional E-value: 3.6e-06 HHHHHHHHHHH-GGTTSEEEEES-TTTCCHHHHHCC-..SEEEEE-S-HHHHHHHH CS RrnaAD 16 kkvineIldklnleekltvleigpGkGilTeeLakra..kqvvvlElderLakllq 69 + ++ne+++ l ++e +t+l++ G G T++++kra +v +l d++ +++ q tr|F6PSG1|F6PSG1_XENTR 47 PVMVNEVIECLAPQEGQTILDLTFGAGGHTTSILKRAsnIKVLALDRDPAAFAIAQ 102 7899*********************************5445555555555555444 PP >> tr|A0A1B8XYZ8|A0A1B8XYZ8_XENTR Uncharacterized protein (Fragment) OS=Xenopus tropicalis OX=8364 GN=XENTR_v900290381m # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 13.0 0.2 3.2e-05 0.055 199 248 .. 8 55 .. 1 61 [] 0.82 Alignments for each domain: == domain 1 score: 13.0 bits; conditional E-value: 3.2e-05 --S-HHHHHHHHHHHHCTTTSBCCCHCCCTSTCHHHHHCTT.T--TTTCC CS RrnaAD 199 pqkdlkkyesvvrkllnrkrktlstslksllpggelqalsstgindnalv 248 + +l+k++ +++k+ k k++ +++ ++l+ ++ q + + i d++++ tr|A0A1B8XYZ8|A0A1B8XYZ8_XENTR 8 AKSSLEKFDEITKKWALDKPKQVPQKMWEILNSQQQQCA--HLIGDKNNL 55 5789*******************************8777..467777664 PP >> sp|B0JYW5|ANM6_XENTR Protein arginine N-methyltransferase 6 OS=Xenopus tropicalis OX=8364 GN=prmt6 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.8 0.0 7.2e-05 0.13 30 94 .. 53 120 .. 31 140 .. 0.75 Alignments for each domain: == domain 1 score: 11.8 bits; conditional E-value: 7.2e-05 TTSEEEEES-TTTCCHHHH.HCC-SEEEEE-S-HHHHHHHHCHTT...TCCCEEEE-S-CCGHHHHHHH CS RrnaAD 30 ekltvleigpGkGilTeeL.akrakqvvvlElderLakllqkkls...kdeklkvvhqDflkfetpeev 94 + +tvl++g+G+Gil++ a+ v ++E ++++l + ++ ++k+kv++ + +e+pe+v sp|B0JYW5|ANM6_XENTR 53 QGKTVLDVGAGTGILSVFSvQAGAQAVYAVEAS-SMSQLACQVVKsndMENKVKVLNSSVESAEIPEQV 120 5789************95515555888899964.444444444444459999***99999999999976 PP >> sp|Q5BKM6|NDUF7_XENTR Protein arginine methyltransferase NDUFAF7, mitochondrial OS=Xenopus tropicalis OX=8364 GN=ndu # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 8.4 0.0 0.0008 1.4 30 54 .. 116 140 .. 106 215 .. 0.77 2 ? 1.7 0.0 0.087 1.5e+02 39 112 .. 327 411 .. 325 417 .. 0.70 Alignments for each domain: == domain 1 score: 8.4 bits; conditional E-value: 0.0008 TTSEEEEES-TTTCCHHHHHCC-SE CS RrnaAD 30 ekltvleigpGkGilTeeLakrakq 54 ++l+++e+gpG G lT L+ + + sp|Q5BKM6|NDUF7_XENTR 116 KSLQLVELGPGRGTLTDDLLRVFSN 140 6899*************99887733 PP == domain 2 score: 1.7 bits; conditional E-value: 0.087 -TTTCCHHHH.HCC-SEEEEE-S-HHHHHHHHCHTT....TCCCEEEE-S-CCGHHHHHHHCT.......TTCCCCEEEEEEE--T CS RrnaAD 39 pGkGilTeeL.akrakqvvvlElderLakllqkkls....kdeklkvvhqDflkfetpeevte.......kdsihqeflvvanlPy 112 pG++ lT+ + ++ ++ v E + L ++q+++ d +lkv+ + + ++ +++++ d+++q+f++++ +P sp|Q5BKM6|NDUF7_XENTR 327 PGTADLTADVdFNFMRRI-VGEAASCLGPVTQHEFLknmgIDIRLKVLLEKSSDVAVQKQLIHgynilmnADQMGQRFKFFSVVPQ 411 566666666644444443.3466666666667666655555667778777888888888777788888889***********9996 PP >> tr|F6XHA2|F6XHA2_XENTR Protein-L-isoaspartate O-methyltransferase OS=Xenopus tropicalis OX=8364 GN=loc100216173 PE=3 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.8 0.0 7.2e-05 0.12 29 75 .. 98 147 .. 83 165 .. 0.81 Alignments for each domain: == domain 1 score: 11.8 bits; conditional E-value: 7.2e-05 GTTSEEEEES-TTTCCHHHHHCC-...SEEEEE-S-HHHHHHHHCHTTTC CS RrnaAD 29 eekltvleigpGkGilTeeLakra...kqvvvlElderLakllqkklskd 75 e + l++g+G G lT+ +a ++ +vv +E ++L+k +++++d tr|F6XHA2|F6XHA2_XENTR 98 VEGAKALDVGSGSGYLTACFARMVgltGKVVGIEHINHLVKDAVQNVKQD 147 388899*****************99999************9988888744 PP >> sp|Q6PBF6|GAMT_XENTR Guanidinoacetate N-methyltransferase OS=Xenopus tropicalis OX=8364 GN=gamt PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.5 0.0 8.7e-05 0.15 31 78 .. 57 104 .. 46 113 .. 0.86 Alignments for each domain: == domain 1 score: 11.5 bits; conditional E-value: 8.7e-05 TSEEEEES-TTTCCHHHHHCC-.SEEEEE-S-HHHHHHHHCHTTTCCCE CS RrnaAD 31 kltvleigpGkGilTeeLakra.kqvvvlElderLakllqkklskdekl 78 vleig G +i ++L ++ +++ ++E +k+lq+ + +++ sp|Q6PBF6|GAMT_XENTR 57 GGRVLEIGFGMAIAATKLEEYNiEEHWIIECNDGVFKRLQEWAT-KQPH 104 567******************99*****************9555.4444 PP >> tr|F7CVL8|F7CVL8_XENTR Methyltransferase-like 9 OS=Xenopus tropicalis OX=8364 GN=mettl9 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.7 0.0 0.00016 0.27 23 85 .. 136 195 .. 121 221 .. 0.80 Alignments for each domain: == domain 1 score: 10.7 bits; conditional E-value: 0.00016 HHHH-GG.TTSEEEEES-TTTCCHHHHHCC-SEEEEE-S-HHHHHHHHCHTTTCCCEEEE-S-C CS RrnaAD 23 ldklnle.ekltvleigpGkGilTeeLakrakqvvvlElderLakllqkklskdeklkvvhqDf 85 l k+++e ++ +l++g+G G T+ + +++ v E+ + ++ lqk k+ ++ v++ D tr|F7CVL8|F7CVL8_XENTR 136 L-KIDPEwKSHRLLDLGAGDGEVTKVMSPHFEEIYVTEMSQTMIWQLQK---KKYRSRVLNIDE 195 3.677778999**************************************...566777777664 PP Internal pipeline statistics summary: ------------------------------------- Query model(s): 1 (265 nodes) Target sequences: 24182 (11782085 residues searched) Passed MSV filter: 688 (0.0284509); expected 483.6 (0.02) Passed bias filter: 443 (0.0183194); expected 483.6 (0.02) Passed Vit filter: 53 (0.00219171); expected 24.2 (0.001) Passed Fwd filter: 14 (0.000578943); expected 0.2 (1e-05) Initial search space (Z): 24182 [actual number of targets] Domain search space (domZ): 14 [number of targets reported over threshold] # CPU time: 0.25u 0.01s 00:00:00.26 Elapsed: 00:00:00.09 # Mc/sec: 34691.69 // [ok]