# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/TRM13.hmm.txt
# target sequence database: proteomes/Drosophila_melanogaster.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: TRM13 [M=262]
Accession: PF05206.13
Description: Methyltransferase TRM13
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.4e-91 304.7 1.9 8.6e-91 303.7 1.9 1.5 1 tr|Q8SX24|Q8SX24_DROME RE67941p OS=Drosophila melanogaster O
0.0029 16.8 3.3 1.6 7.8 0.0 3.0 3 sp|Q9VJ34|GSTCD_DROME Glutathione S-transferase C-terminal
Domain annotation for each sequence (and alignments):
>> tr|Q8SX24|Q8SX24_DROME RE67941p OS=Drosophila melanogaster OX=7227 GN=Dmel\CG18048 PE=2 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 303.7 1.9 1.2e-94 8.6e-91 2 261 .. 184 428 .. 183 429 .. 0.97
Alignments for each domain:
== domain 1 score: 303.7 bits; conditional E-value: 1.2e-94
TRM13 2 qqsslignleelkllekssayvEfGaGkgelsryvnqaleedkkenskyvLidrasnrlkaDrklrkdeselaikRlkidIkdLnls 88
q++sl+g+le+ ++l +++ y+EfGaGkg+l+ +++++l+e+k ++s++vLidr+s r+k+D+kl+++e +++R+++dI dL+ls
tr|Q8SX24|Q8SX24_DROME 184 QTTSLLGILEHDHQLMDHTSYIEFGAGKGQLAYFLATVLQEQKLSHSQVVLIDRMSLRHKKDNKLANRE---VVQRIRADIADLKLS 267
899******************************************************************...8************** PP
TRM13 89 aleelekkkkvvavsKHLCGaATDLtLrcllnsekaskkakleglliAlCChhvCswkeyvnkeyleelgitkeefqiltkmvSWav 175
al+el+k++++va sKHLCGaATDLtLrc+l +as +++liAlCChh+Csw++yv++++l+e gi +ef iltkmvSWav
tr|Q8SX24|Q8SX24_DROME 268 ALPELKKTQRTVAFSKHLCGAATDLTLRCILGDGNAS----SDYVLIALCCHHRCSWRSYVGRKFLQEAGIGPREFVILTKMVSWAV 350
*********************************9986....59******************************************** PP
TRM13 176 sgkrkseaeeedekeekekeekkeeeeseeekksklsseereeiGlkakrlidegRllalkekgfeaelvkYvekevslEnvlLla 261
+g+ ++e++k++++++ + +e+++++l+++ere+iG+++kr++d+gRl++l+++g++ael++Yv+++v+lEnv+Lla
tr|Q8SX24|Q8SX24_DROME 351 CGTG--------LSRERRKAMESADFQLTETNTQRLTRQEREQIGQQCKRVLDYGRLEHLRSHGYQAELKFYVPRDVTLENVVLLA 428
****........56788899999999**********************************************************98 PP
>> sp|Q9VJ34|GSTCD_DROME Glutathione S-transferase C-terminal domain-containing protein homolog OS=Drosophila melanogas
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -0.4 0.0 0.076 5.2e+02 16 42 .. 384 410 .. 368 433 .. 0.70
2 ! 5.7 2.3 0.0011 7.3 100 122 .. 454 476 .. 449 489 .. 0.84
3 ! 7.8 0.0 0.00023 1.6 218 260 .. 536 578 .. 511 580 .. 0.89
Alignments for each domain:
== domain 1 score: -0.4 bits; conditional E-value: 0.076
TRM13 16 lekssayvEfGaGkgelsryvnqalee 42
++ +v+f++G g+l+ ++ l +
sp|Q9VJ34|GSTCD_DROME 384 AQPGDRIVDFCSGTGHLAILLALKLPN 410
3677899**********9988876644 PP
== domain 2 score: 5.7 bits; conditional E-value: 0.0011
TRM13 100 vavsKHLCGaATDLtLrcllnse 122
++ s H CG+ATD+ L+ + + +
sp|Q9VJ34|GSTCD_DROME 454 IGASLHACGTATDIVLQQCRRAK 476
57799***********9887665 PP
== domain 3 score: 7.8 bits; conditional E-value: 0.00023
TRM13 218 eiGlkakrlidegRllalkekgfeaelvkYvekevslEnvlLl 260
Gl + ++d+ Rll +e g+++ l+ +++ ++ n+lL+
sp|Q9VJ34|GSTCD_DROME 536 LQGLHCMSVVDTDRLLQAEEAGYQVILTRLKPEQCTPKNHLLV 578
4699************************************997 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (262 nodes)
Target sequences: 13786 (7394964 residues searched)
Passed MSV filter: 1357 (0.0984332); expected 275.7 (0.02)
Passed bias filter: 511 (0.0370666); expected 275.7 (0.02)
Passed Vit filter: 50 (0.00362687); expected 13.8 (0.001)
Passed Fwd filter: 3 (0.000217612); expected 0.1 (1e-05)
Initial search space (Z): 13786 [actual number of targets]
Domain search space (domZ): 2 [number of targets reported over threshold]
# CPU time: 0.21u 0.01s 00:00:00.22 Elapsed: 00:00:00.07
# Mc/sec: 27678.29
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