# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/TRM13.hmm.txt
# target sequence database: proteomes/Ornithorhynchus_anatinus.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: TRM13 [M=262]
Accession: PF05206.13
Description: Methyltransferase TRM13
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.3e-88 295.9 0.0 4.3e-88 295.5 0.0 1.1 1 tr|F7DDP2|F7DDP2_ORNAN tRNA methyltransferase 13 homolog OS=
Domain annotation for each sequence (and alignments):
>> tr|F7DDP2|F7DDP2_ORNAN tRNA methyltransferase 13 homolog OS=Ornithorhynchus anatinus OX=9258 GN=TRMT13 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 295.5 0.0 2e-92 4.3e-88 1 261 [. 117 422 .. 117 423 .. 0.96
Alignments for each domain:
== domain 1 score: 295.5 bits; conditional E-value: 2e-92
TRM13 1 lqqsslignleelkllekssayvEfGaGkgelsryvnqaleedkkenskyvLidrasnrlkaDrklrkdeselaikRlkidIkdLnl 87
+qq+s++gn+e+lkll +++++vEfGaG+g+ls++v++ale + en++++L++r +r+k+D k+rk++s ++Rl+idI++L+l
tr|F7DDP2|F7DDP2_ORNAN 117 KQQASILGNIEKLKLLGPRRCFVEFGAGRGKLSHWVDTALEGA--ENVHFYLVERVATRFKVDGKHRKRNS--MFERLQIDIQHLCL 199
69**************************************666..*************************6..************** PP
TRM13 88 saleele.kkkkvvavsKHLCGaATDLtLrcllnsekask.....................................kakleglliA 136
+++ l kk ++++++KHLCG+ATDL+Lrcl++++ a+ + ++g++iA
tr|F7DDP2|F7DDP2_ORNAN 200 GKIPMLVeKKLPLIGIGKHLCGVATDLALRCLVETYVAQCekrseepsvkriksekeeaketntreedgkeenvpeaWPPVAGIVIA 286
*****98899*************************99877899******************************************** PP
TRM13 137 lCChhvCswkeyvnkeyleelgitkeefqiltkmvSWavsgkrkse............aeeedekeekekeekkeeeeseeekkskl 211
lCChh+C+w +yv+ke++++l + ef ++++++SWa++g+r++ ++ +ee++ +++ +++ ++ l
tr|F7DDP2|F7DDP2_ORNAN 287 LCCHHRCDWTHYVGKEFFRALALGPVEFGYFQRLSSWATCGMRETAaetskteprgqgC-QSADNEEHQPGACRHADDKPDSLHGLL 372
*******************************************77799******99642.3344678888999999*********** PP
TRM13 212 sseereeiGlkakrlidegRllalkekgfeaelvkYvekevslEnvlLla 261
s+eer++iG+ +krlid+gR+l+l++kg++ael++Y++++vslEnvlL+a
tr|F7DDP2|F7DDP2_ORNAN 373 SAEERKNIGRLCKRLIDQGRVLYLQQKGYDAELQYYTDPSVSLENVLLTA 422
************************************************97 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (262 nodes)
Target sequences: 21677 (8259262 residues searched)
Passed MSV filter: 1207 (0.0556811); expected 433.5 (0.02)
Passed bias filter: 577 (0.0266181); expected 433.5 (0.02)
Passed Vit filter: 65 (0.00299857); expected 21.7 (0.001)
Passed Fwd filter: 2 (9.22637e-05); expected 0.2 (1e-05)
Initial search space (Z): 21677 [actual number of targets]
Domain search space (domZ): 1 [number of targets reported over threshold]
# CPU time: 0.22u 0.01s 00:00:00.23 Elapsed: 00:00:00.08
# Mc/sec: 27049.08
//
[ok]