# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file:                  pfam_list/TRM13.hmm.txt
# target sequence database:        proteomes/Trichoplax_adhaerens.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query:       TRM13  [M=262]
Accession:   PF05206.13
Description: Methyltransferase TRM13
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence               Description
    ------- ------ -----    ------- ------ -----   ---- --  --------               -----------
    1.1e-68  231.0   4.4    1.8e-68  230.3   4.4    1.3  1  tr|B3S1E6|B3S1E6_TRIAD  Uncharacterized protein OS=Trichoplax


Domain annotation for each sequence (and alignments):
>> tr|B3S1E6|B3S1E6_TRIAD  Uncharacterized protein OS=Trichoplax adhaerens OX=10228 GN=TRIADDRAFT_57802 PE=4 SV=1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  230.3   4.4   1.6e-72   1.8e-68       2     228 ..     165     405 ..     164     412 .. 0.87

  Alignments for each domain:
  == domain 1  score: 230.3 bits;  conditional E-value: 1.6e-72
                   TRM13   2 qqsslignleelkllekssayvEfGaGkgelsryvnqaleedkkenskyvLidrasnrlkaDrklrkdeselaikRlkidIkdLnls 88 
                             qq+s+ign+e+++ll+++ +y+EfGaG+g+ls++v++al+e  ++++++vLidra nr k D  ++++++ ++++R+k+dI+++nl 
  tr|B3S1E6|B3S1E6_TRIAD 165 QQASIIGNMEKFGLLRSQACYIEFGAGRGKLSHWVARALSEY-NNKVEFVLIDRANNRRKLDCMHTSNKMGPKFERVKMDIEHFNLA 250
                             9**************************************776.899***************************************** PP

                   TRM13  89 aleelekkkkvvavsKHLCGaATDLtLrcllnsekask....kakleglliAlCChhvCswkeyvnkeyleelgitkeefqiltkmv 171
                             + +  + +  v++++KHLCGaATD++Lrcl+n++++++    +++++g+++AlCChh+C+wk+yvn+ey+ elg+ +e+f+++++++
  tr|B3S1E6|B3S1E6_TRIAD 251 KYSF-KADWDVIGIGKHLCGAATDVSLRCLMNTQSQNSkcrtRNSVRGAILALCCHHRCDWKSYVNREYFLELGFDEEDFNVICSLS 336
                             **99.7799************************99877899999******************************************* PP

                   TRM13 172 SWavsgkrkse............aeeedekeekekeek.keeeeseeekkskls...seereeiGlkakrlid 228
                             SWa+++ +k +            +    + +e  ++++ +e++ +++  +s+l+   +++reeiG+ +k+l++
  tr|B3S1E6|B3S1E6_TRIAD 337 SWATCSFHKGQsegvsaetstsvM----HGKEIGSDSCaNESNLGSAVFQSRLNqdfRQKREEIGQLCKQLLN 405
                             ******998888999887754331....333333333313333334444555652225799**********98 PP



Internal pipeline statistics summary:
-------------------------------------
Query model(s):                              1  (262 nodes)
Target sequences:                        11518  (5222075 residues searched)
Passed MSV filter:                       861  (0.0747526); expected 230.4 (0.02)
Passed bias filter:                      290  (0.025178); expected 230.4 (0.02)
Passed Vit filter:                        26  (0.00225734); expected 11.5 (0.001)
Passed Fwd filter:                         1  (8.68206e-05); expected 0.1 (1e-05)
Initial search space (Z):              11518  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.12u 0.00s 00:00:00.12 Elapsed: 00:00:00.04
# Mc/sec: 34204.59
//
[ok]