# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/TYW3.hmm.txt
# target sequence database: proteomes/Monosiga_brevicollis.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: TYW3 [M=214]
Accession: PF02676.13
Description: Methyltransferase TYW3
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.5e-60 202.1 0.0 4.5e-60 201.7 0.0 1.1 1 tr|A9US70|A9US70_MONBE Predicted protein OS=Monosiga brevico
Domain annotation for each sequence (and alignments):
>> tr|A9US70|A9US70_MONBE Predicted protein OS=Monosiga brevicollis OX=81824 GN=5697 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 201.7 0.0 4.9e-64 4.5e-60 2 213 .. 14 215 .. 13 216 .. 0.95
Alignments for each domain:
== domain 1 score: 201.7 bits; conditional E-value: 4.9e-64
HHHHHHHHH....HHHHHCCHC-GGGHHHHHHHHC-SSEEEEEEES-EEEEE............EESSTT-STT-EEEEEESS---H CS
TYW3 2 rKakiLeeLsvpdtdkspkGsvDekirelideinsledlvTtSSCsGRvsvflegrksaeaeekaaksggkkgggkwlfvsHdpvke 88
+Ka++Le+L+ + d+s+kG +D++i l++ in+l+d+vTtSSCsGR+++f +++++++k++g+wl+ sHd+v+
tr|A9US70|A9US70_MONBE 14 SKARVLEQLQLC-LDNSKKGALDAPIEALLNFINELDDYVTTSSCSGRIALF------------CEQQDARKRTGTWLLASHDVVTV 87
699******988.***************************************............788999999************** PP
HHHHHHHCS--..............SSEEEEEEE--EEEEEESSHHHHHHHHHHHHHCT-T..............T-EEEEECTTEE CS
TYW3 89 eellaelegleeeeesaksseseeeerlivfkfePmILhvlcrslehAqkllsaAlsaGfr..............eSGivslkkkkv 161
e+++a++++++ +++ +++++fkfeP++Lhv+cr+le+A+++l++Al++G+r +SG+v k k+
tr|A9US70|A9US70_MONBE 88 EAAAAAYQDERIRDS----------QGPVMFKFEPFVLHVQCRTLERARDFLKTALDCGLRlwmaslcmcapcisNSGLVLGK--KF 162
**********97766..........89*****************************************************977..6* PP
EEEEE---EEEEEEE.SSTS---HHHHHHHHHHHHHHHHHHHHHHHHHHHHC- CS
TYW3 162 ivairsglklevpig.rkkllvseeylkllvklanerfeenkkrierfeealk 213
+va+r++lkle+p++ +++ lv+e+y+++lv++an++f+en +ri+rfe+ ++
tr|A9US70|A9US70_MONBE 163 MVAVRTTLKLESPVAyDGQRLVDEAYIACLVQMANDMFAENLQRIARFETGVR 215
***************7556*****************************98775 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (214 nodes)
Target sequences: 9188 (5511963 residues searched)
Passed MSV filter: 353 (0.0384197); expected 183.8 (0.02)
Passed bias filter: 207 (0.0225294); expected 183.8 (0.02)
Passed Vit filter: 27 (0.00293862); expected 9.2 (0.001)
Passed Fwd filter: 1 (0.000108838); expected 0.1 (1e-05)
Initial search space (Z): 9188 [actual number of targets]
Domain search space (domZ): 1 [number of targets reported over threshold]
# CPU time: 0.09u 0.00s 00:00:00.09 Elapsed: 00:00:00.04
# Mc/sec: 29489.00
//
[ok]