# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/TYW3.hmm.txt
# target sequence database: proteomes/Nematostella_vectensis.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: TYW3 [M=214]
Accession: PF02676.13
Description: Methyltransferase TYW3
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.1e-40 136.7 0.5 3e-20 72.9 0.1 2.2 2 tr|A7RZ42|A7RZ42_NEMVE Predicted protein OS=Nematostella vec
1.2e-17 64.5 0.0 1.6e-17 64.0 0.0 1.3 1 tr|A7RZ41|A7RZ41_NEMVE Predicted protein OS=Nematostella vec
Domain annotation for each sequence (and alignments):
>> tr|A7RZ42|A7RZ42_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g204295 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 62.9 0.1 2.8e-21 3.5e-17 2 55 .. 7 55 .. 6 59 .. 0.90
2 ! 72.9 0.1 2.5e-24 3e-20 140 213 .. 56 130 .. 55 131 .. 0.95
Alignments for each domain:
== domain 1 score: 62.9 bits; conditional E-value: 2.8e-21
HHHHHHHHH....HHHHHCCHC-GGGHHHHHHHHC-SSEEEEEEES-EEEEE.. CS
TYW3 2 rKakiLeeLsvpdtdkspkGsvDekirelideinsledlvTtSSCsGRvsvfle 55
+K+++L++ d+s+kGs+De+i++l+d in l+ ++TtSSCsGR+svf+e
tr|A7RZ42|A7RZ42_NEMVE 7 QKQQTLSQ-----ADLSKKGSIDEPIVNLVDYINGLDAFFTTSSCSGRISVFTE 55
57777777.....6**************************************76 PP
== domain 2 score: 72.9 bits; conditional E-value: 2.5e-24
HHHHHHCT-TT-EEEEECTTEEEEEEE---EEEEEEE.SSTS---HHHHHHHHHHHHHHHHHHHHHHHHHHHHC- CS
TYW3 140 lsaAlsaGfreSGivslkkkkvivairsglklevpig.rkkllvseeylkllvklanerfeenkkrierfeealk 213
l+a l++G+++SGiv +k+++++a+rs+++levp+ +++llvs+ey++++v++an+++e+nk+ri+rf+++lk
tr|A7RZ42|A7RZ42_NEMVE 56 LKASLESGYKNSGIVIGRKSRYMMAVRSTHSLEVPLIcNGNLLVSKEYIQYVVDMANKKMEDNKDRIQRFYTKLK 130
67899********************************7767********************************98 PP
>> tr|A7RZ41|A7RZ41_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g204294 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 64.0 0.0 1.3e-21 1.6e-17 2 55 .. 7 55 .. 6 107 .. 0.86
Alignments for each domain:
== domain 1 score: 64.0 bits; conditional E-value: 1.3e-21
HHHHHHHHH....HHHHHCCHC-GGGHHHHHHHHC-SSEEEEEEES-EEEEE.. CS
TYW3 2 rKakiLeeLsvpdtdkspkGsvDekirelideinsledlvTtSSCsGRvsvfle 55
+K+++L++ d+s+kGs+De+i++l+d in l+ ++TtSSCsGR+svf+e
tr|A7RZ41|A7RZ41_NEMVE 7 QKQQTLSQ-----ADLSKKGSIDEPIVNLVDYINGLDAFFTTSSCSGRISVFTE 55
57777777.....6**************************************65 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (214 nodes)
Target sequences: 24428 (8257945 residues searched)
Passed MSV filter: 752 (0.0307843); expected 488.6 (0.02)
Passed bias filter: 432 (0.0176846); expected 488.6 (0.02)
Passed Vit filter: 28 (0.00114623); expected 24.4 (0.001)
Passed Fwd filter: 3 (0.00012281); expected 0.2 (1e-05)
Initial search space (Z): 24428 [actual number of targets]
Domain search space (domZ): 2 [number of targets reported over threshold]
# CPU time: 0.16u 0.01s 00:00:00.17 Elapsed: 00:00:00.07
# Mc/sec: 25245.72
//
[ok]