# hmmsearch :: search profile(s) against a sequence database # HMMER 3.1b2 (February 2015); http://hmmer.org/ # Copyright (C) 2015 Howard Hughes Medical Institute. # Freely distributed under the GNU General Public License (GPLv3). # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query HMM file: pfam_list/Trm112p.hmm.txt # target sequence database: proteomes/Macaca_mulatta.fasta # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: Trm112p [M=68] Accession: PF03966.15 Description: Trm112p-like protein Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 5.1e-15 56.0 0.0 6.3e-15 55.7 0.0 1.1 1 tr|F7CV76|F7CV76_MACMU tRNA methyltransferase 112 homol 2.5e-11 44.2 0.0 3.6e-11 43.7 0.0 1.2 1 tr|A0A1D5R6T6|A0A1D5R6T6_MACMU Uncharacterized protein OS=Macac 0.0024 18.6 0.1 2.2 9.1 0.0 4.0 4 tr|A0A1D5RA56|A0A1D5RA56_MACMU Chromosome 11 open reading frame ------ inclusion threshold ------ 0.018 15.8 2.4 0.067 14.0 2.4 2.1 1 tr|F7HAV2|F7HAV2_MACMU Tripartite motif containing 38 O 0.18 12.6 0.2 0.46 11.3 0.2 1.7 1 tr|F6PVK0|F6PVK0_MACMU Deltex E3 ubiquitin ligase 4 OS= 0.38 11.6 2.6 15 6.5 0.5 3.5 3 tr|F7FPY3|F7FPY3_MACMU Protein snail-like protein 2 OS= 0.63 10.9 0.1 0.63 10.9 0.1 3.3 2 tr|F6VZN9|F6VZN9_MACMU Zinc finger protein 562 OS=Macac 0.64 10.9 9.0 64 4.5 0.1 4.9 4 tr|F7GTT3|F7GTT3_MACMU Zinc finger protein 324 OS=Macac 0.73 10.7 21.4 14 6.6 0.4 7.3 5 tr|F6YN69|F6YN69_MACMU Zinc finger protein 786 OS=Macac 0.75 10.6 13.3 52 4.8 0.0 7.3 5 tr|F7ABK6|F7ABK6_MACMU Zinc finger protein 559 OS=Macac 1.2 10.0 4.2 3.3 8.6 0.6 3.4 2 tr|A0A1D5QDL7|A0A1D5QDL7_MACMU Uncharacterized protein OS=Macac 1.3 9.8 10.7 45 5.0 0.0 5.5 4 tr|F7HA70|F7HA70_MACMU Zinc finger protein 460 OS=Macac 2.5 9.0 9.7 5.1 8.0 0.0 3.7 4 tr|A0A1D5QJ30|A0A1D5QJ30_MACMU Uncharacterized protein OS=Macac 3.5 8.5 47.6 34 5.4 1.2 11.0 8 tr|A0A1D5QI44|A0A1D5QI44_MACMU Zinc finger protein 425 OS=Macac 4.6 8.1 20.3 0.48 11.3 0.2 5.6 5 tr|A0A1D5RBU7|A0A1D5RBU7_MACMU Zinc finger protein OS=Macaca mu 5 8.0 5.5 15 6.5 5.5 1.9 1 tr|F7DX24|F7DX24_MACMU SH3 domain containing ring finge 6 7.8 9.4 18 6.2 0.4 4.3 3 tr|F7HHR3|F7HHR3_MACMU Zinc finger protein 707 OS=Macac 6.3 7.7 9.0 37 5.2 0.2 3.6 2 tr|F7GMN8|F7GMN8_MACMU Tripartite motif containing 9 OS 8 7.4 17.0 21 6.0 3.7 5.5 2 tr|F6Q155|F6Q155_MACMU Zinc finger protein 680 OS=Macac Domain annotation for each sequence (and alignments): >> tr|F7CV76|F7CV76_MACMU tRNA methyltransferase 112 homolog OS=Macaca mulatta OX=9544 GN=TRMT112 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 55.7 0.0 5.7e-18 6.3e-15 1 68 [] 2 112 .. 2 112 .. 0.98 Alignments for each domain: == domain 1 score: 55.7 bits; conditional E-value: 5.7e-18 BTGGCCC-B-TTTHH......C-..........................-HHHHHHHHH.TT---S-SS----S...........CH CS Trm112p 1 kllllniLaCpackg......pL..........................dwealvevaa.lglnelpkekpedy...........el 43 kll++n+L+++ ++g pL +w+a++e+a l+l ++pk + e y +l tr|F7CV76|F7CV76_MACMU 2 KLLTHNLLSSH-VRGvgsrgfPLrlqatevricpvefnpnfvarmipkvEWAAFLEAADnLRLIQVPKGPVEGYeeneeflrtmhHL 87 789********.*********9999************************************************************** PP HTTEECCCCEEEETTTTEEEEEETT CS Trm112p 44 lleldieegeLvCpncgraYpIkdG 68 lle++++eg+L+Cp+ gr +pI+ G tr|F7CV76|F7CV76_MACMU 88 LLEVEVIEGTLQCPESGRMFPISRG 112 **********************988 PP >> tr|A0A1D5R6T6|A0A1D5R6T6_MACMU Uncharacterized protein OS=Macaca mulatta OX=9544 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 43.7 0.0 3.2e-14 3.6e-11 1 68 [] 2 96 .. 2 96 .. 0.90 Alignments for each domain: == domain 1 score: 43.7 bits; conditional E-value: 3.2e-14 BTGGCCC-B-TTTHH......C-..........................-HHHHHHHHH.TT---S-SS----S.....CH CS Trm112p 1 kllllniLaCpackg......pL..........................dwealvevaa.lglnelpkekpedy.....el 43 kll++n+L+++ + g pL +w+a++e+a l+l + +l tr|A0A1D5R6T6|A0A1D5R6T6_MACMU 2 KLLTHNLLSSH-VQGvgsrgfPLrlqatevricpvkfnpnfvapmipkvEWAAFLEAADnLRL----------IqvtmhHL 71 789********.9999*****9999*********************************84443..........133344** PP HTTEECCCCEEEETTTTEEEEEETT CS Trm112p 44 lleldieegeLvCpncgraYpIkdG 68 lle++++eg+L+Cp+ gr +pI+ G tr|A0A1D5R6T6|A0A1D5R6T6_MACMU 72 LLEVEVIEGTLQCPKSGRMFPISRG 96 **********************988 PP >> tr|A0A1D5RA56|A0A1D5RA56_MACMU Chromosome 11 open reading frame 95 OS=Macaca mulatta OX=9544 GN=C11orf95 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -0.1 0.0 1.5 1.7e+03 41 60 .. 85 111 .. 59 114 .. 0.76 2 ! 9.1 0.0 0.002 2.2 39 64 .. 238 274 .. 187 274 .. 0.77 3 ? 1.9 0.0 0.36 4e+02 41 60 .. 398 424 .. 365 428 .. 0.77 4 ? 1.1 0.0 0.66 7.3e+02 41 60 .. 553 585 .. 526 597 .. 0.75 Alignments for each domain: == domain 1 score: -0.1 bits; conditional E-value: 1.5 S.......CHHTTEECCCCEEEETTTT CS Trm112p 41 y.......ellleldieegeLvCpncg 60 y e l+ ++ + +vC cg tr|A0A1D5RA56|A0A1D5RA56_MACMU 85 YyhdhwrlEYLMDFNPARHGMVCMVCG 111 255566778899999********9998 PP == domain 2 score: 9.1 bits; conditional E-value: 0.002 --S...........CHHTTEECCCCEEEETTTTEEEE CS Trm112p 39 edy...........ellleldieegeLvCpncgraYp 64 e++ e l+ +d + LvC +cgra p tr|A0A1D5RA56|A0A1D5RA56_MACMU 238 ERRlkeslqnwfraECLMDYDPRGNRLVCMACGRALP 274 3334444467788899******************976 PP == domain 3 score: 1.9 bits; conditional E-value: 0.36 S.......CHHTTEECCCCEEEETTTT CS Trm112p 41 y.......ellleldieegeLvCpncg 60 + e l+eld + LvC cg tr|A0A1D5RA56|A0A1D5RA56_MACMU 398 HpqerwrlEYLMELDGGRRGLVCGVCG 424 03333588889*************998 PP == domain 4 score: 1.1 bits; conditional E-value: 0.66 S.............CHHTTEECCCCEEEETTTT CS Trm112p 41 y.............ellleldieegeLvCpncg 60 e l+ +d + LvC cg tr|A0A1D5RA56|A0A1D5RA56_MACMU 553 SreqrrnyqprwrgEYLMDYDGSRRGLVCMVCG 585 145667777777887788888888899998887 PP >> tr|F7HAV2|F7HAV2_MACMU Tripartite motif containing 38 OS=Macaca mulatta OX=9544 GN=TRIM38 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 14.0 2.4 6e-05 0.067 7 62 .. 56 118 .. 50 118 .. 0.72 Alignments for each domain: == domain 1 score: 14.0 bits; conditional E-value: 6e-05 C-B-TTTHHC-.........-HHHHHHHHHTT---.S-SS----S.CHHTTEECCCCEEEETTTTEE CS Trm112p 7 iLaCpackgpL.........dwealvevaalglne.lpkekpedy.ellleldieegeLvCpncgra 62 +Cp+c+ p ++ +l+e+ + e ++ +e++ e l+ ++++eg+L+C +c ra tr|F7HAV2|F7HAV2_MACMU 56 TFCCPQCRAPFhmhslrpnkQLGSLIEALK----EmDQEMSCEEHgEQLHLFCEDEGKLICWRCERA 118 669******775555566665566666655....32455566666888889*************997 PP >> tr|F6PVK0|F6PVK0_MACMU Deltex E3 ubiquitin ligase 4 OS=Macaca mulatta OX=9544 GN=DTX4 PE=4 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.3 0.2 0.00041 0.46 29 68 .] 359 414 .. 340 414 .. 0.74 Alignments for each domain: == domain 1 score: 11.3 bits; conditional E-value: 0.00041 T---.S-SS----S...............CHHTTEECCCCEEEETTTTEEEEEETT CS Trm112p 29 glne.lpkekpedy...............ellleldieegeLvCpncgraYpIkdG 68 g++ p kp+ + ++ ++ ++g+L+Cp c+ +Y +k G tr|F6PVK0|F6PVK0_MACMU 359 GYKGpQPTVKPDLVgklsrcghiyhiyclVAMYNNGNKDGSLQCPTCKTIYGVKTG 414 555555666677667777777777777776677778889************99876 PP >> tr|F7FPY3|F7FPY3_MACMU Protein snail-like protein 2 OS=Macaca mulatta OX=9544 GN=SNAI2 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 2.1 0.0 0.31 3.4e+02 42 63 .. 121 137 .. 73 142 .. 0.69 2 ? 6.5 0.5 0.013 15 43 63 .. 202 222 .. 144 223 .. 0.79 3 ? -0.4 0.0 1.9 2.1e+03 45 63 .. 232 250 .. 224 251 .. 0.79 Alignments for each domain: == domain 1 score: 2.1 bits; conditional E-value: 0.31 CHHTTEECCCCEEEETTTTEEE CS Trm112p 42 ellleldieegeLvCpncgraY 63 + ie ++++C+ c+ +Y tr|F7FPY3|F7FPY3_MACMU 121 H-----AIEAEKFQCNLCNKTY 137 3.....788899******9999 PP == domain 2 score: 6.5 bits; conditional E-value: 0.013 HHTTEECCCCEEEETTTTEEE CS Trm112p 43 llleldieegeLvCpncgraY 63 ++++ e + Cp+c+ra+ tr|F7FPY3|F7FPY3_MACMU 202 GHIRTHTGEKPFSCPHCNRAF 222 44889999999*********9 PP == domain 3 score: -0.4 bits; conditional E-value: 1.9 TTEECCCCEEEETTTTEEE CS Trm112p 45 leldieegeLvCpncgraY 63 l+++ + + +C+nc ++ tr|F7FPY3|F7FPY3_MACMU 232 LQTHSDVKKYQCKNCSKTF 250 77888888889****8877 PP >> tr|F6VZN9|F6VZN9_MACMU Zinc finger protein 562 OS=Macaca mulatta OX=9544 GN=ZNF562 PE=4 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.9 0.1 0.00056 0.63 41 64 .. 224 254 .. 185 254 .. 0.77 2 ? -0.7 1.6 2.3 2.6e+03 56 63 .. 302 309 .. 273 338 .. 0.55 Alignments for each domain: == domain 1 score: 10.9 bits; conditional E-value: 0.00056 S.......CHHTTEECCCCEEEETTTTEEEE CS Trm112p 41 y.......ellleldieegeLvCpncgraYp 64 ++ +++++ e ++ C++cgr ++ tr|F6VZN9|F6VZN9_MACMU 224 SstnfsqlSAHVKTHKGEKSFECKECGRSFR 254 1555556666699***************996 PP == domain 2 score: -0.7 bits; conditional E-value: 2.3 ETTTTEEE CS Trm112p 56 CpncgraY 63 C++cg+a+ tr|F6VZN9|F6VZN9_MACMU 302 CKECGQAF 309 33333333 PP >> tr|F7GTT3|F7GTT3_MACMU Zinc finger protein 324 OS=Macaca mulatta OX=9544 GN=ZNF324 PE=4 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -1.8 0.0 5.1 5.7e+03 51 63 .. 254 266 .. 238 267 .. 0.85 2 ? 4.3 0.2 0.063 71 46 63 .. 333 350 .. 292 351 .. 0.74 3 ? 3.7 0.2 0.1 1.1e+02 47 63 .. 418 434 .. 371 435 .. 0.77 4 ? 4.5 0.1 0.057 64 47 64 .. 474 491 .. 440 491 .. 0.84 Alignments for each domain: == domain 1 score: -1.8 bits; conditional E-value: 5.1 CCEEEETTTTEEE CS Trm112p 51 egeLvCpncgraY 63 e ++ C++c ++ tr|F7GTT3|F7GTT3_MACMU 254 EKSFECRACSKVF 266 78999****9887 PP == domain 2 score: 4.3 bits; conditional E-value: 0.063 TEECCCCEEEETTTTEEE CS Trm112p 46 eldieegeLvCpncgraY 63 +++ e ++ C++cg a+ tr|F7GTT3|F7GTT3_MACMU 333 RIHTAEKSFSCSECGKAF 350 478899*********999 PP == domain 3 score: 3.7 bits; conditional E-value: 0.1 EECCCCEEEETTTTEEE CS Trm112p 47 ldieegeLvCpncgraY 63 ++ e + Cp cgra+ tr|F7GTT3|F7GTT3_MACMU 418 VHTGEKPFACPQCGRAF 434 445567889******99 PP == domain 4 score: 4.5 bits; conditional E-value: 0.057 EECCCCEEEETTTTEEEE CS Trm112p 47 ldieegeLvCpncgraYp 64 ++ e +vC+ cgra++ tr|F7GTT3|F7GTT3_MACMU 474 IHTGEKPFVCTQCGRAFR 491 56667889********96 PP >> tr|F6YN69|F6YN69_MACMU Zinc finger protein 786 OS=Macaca mulatta OX=9544 GN=ZNF786 PE=4 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 0.5 6.1 1 1.1e+03 46 64 .. 473 491 .. 356 494 .. 0.78 2 ? 6.6 0.4 0.012 14 41 66 .. 571 605 .. 506 607 .. 0.77 3 ? 3.1 0.0 0.15 1.6e+02 50 66 .. 617 633 .. 608 635 .. 0.82 4 ? 2.4 0.0 0.26 2.9e+02 45 65 .. 667 687 .. 641 690 .. 0.82 5 ? -2.1 0.1 6.4 7.1e+03 52 63 .. 702 713 .. 694 714 .. 0.76 Alignments for each domain: == domain 1 score: 0.5 bits; conditional E-value: 1 TEECCCCEEEETTTTEEEE CS Trm112p 46 eldieegeLvCpncgraYp 64 +l+ +e ++Cp+cg+ ++ tr|F6YN69|F6YN69_MACMU 473 RLHTDEKPFQCPECGLSFR 491 4778889999999999987 PP == domain 2 score: 6.6 bits; conditional E-value: 0.012 S.........CHHTTEECCCCEEEETTTTEEEEEE CS Trm112p 41 y.........ellleldieegeLvCpncgraYpIk 66 ++ l+++ e ++Cp+c+r ++ k tr|F6YN69|F6YN69_MACMU 571 GkgftrqsklTEHLRVHSGERPFQCPECNRSFRLK 605 1555555555455889999999**********865 PP == domain 3 score: 3.1 bits; conditional E-value: 0.15 CCCEEEETTTTEEEEEE CS Trm112p 50 eegeLvCpncgraYpIk 66 e ++Cp+c+ Y++k tr|F6YN69|F6YN69_MACMU 617 GERPFQCPECDKRYRVK 633 566789*********98 PP == domain 4 score: 2.4 bits; conditional E-value: 0.26 TTEECCCCEEEETTTTEEEEE CS Trm112p 45 leldieegeLvCpncgraYpI 65 ++++ e ++Cp+c+ ++ tr|F6YN69|F6YN69_MACMU 667 IRTHTGEKPFQCPKCDKSFRL 687 678999999*******99986 PP == domain 5 score: -2.1 bits; conditional E-value: 6.4 CEEEETTTTEEE CS Trm112p 52 geLvCpncgraY 63 + Cp+cg + tr|F6YN69|F6YN69_MACMU 702 RPFHCPDCGKNF 713 5578****9776 PP >> tr|F7ABK6|F7ABK6_MACMU Zinc finger protein 559 OS=Macaca mulatta OX=9544 GN=ZNF559 PE=4 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.4 0.0 0.13 1.4e+02 8 8 .. 225 225 .. 36 314 .. 0.59 2 ? -0.9 2.6 2.8 3.1e+03 41 63 .. 421 453 .. 354 454 .. 0.69 3 ? 1.5 0.1 0.48 5.4e+02 45 64 .. 491 510 .. 461 512 .. 0.71 4 ? 4.8 0.0 0.046 52 55 68 .] 529 542 .. 513 542 .. 0.85 5 ? -0.1 0.0 1.6 1.7e+03 45 63 .. 547 565 .. 543 566 .. 0.84 Alignments for each domain: == domain 1 score: 3.4 bits; conditional E-value: 0.13 - CS Trm112p 8 L 8 L tr|F7ABK6|F7ABK6_MACMU 225 L 225 1 PP == domain 2 score: -0.9 bits; conditional E-value: 2.8 S..........CHHTTEECCCCEEEETTTTEEE CS Trm112p 41 y..........ellleldieegeLvCpncgraY 63 ++ ++++ e +C++cg a+ tr|F7ABK6|F7ABK6_MACMU 421 CgkafansshlTVHMRTHTGEKPYQCKECGKAF 453 234444444444446677777777777777776 PP == domain 3 score: 1.5 bits; conditional E-value: 0.48 TTEECCCCEEEETTTTEEEE CS Trm112p 45 leldieegeLvCpncgraYp 64 l+ + e + C++cg a++ tr|F7ABK6|F7ABK6_MACMU 491 LRSHSAERPFECEECGKAFR 510 55677888899*****9996 PP == domain 4 score: 4.8 bits; conditional E-value: 0.046 EETTTTEEEEEETT CS Trm112p 55 vCpncgraYpIkdG 68 C +cgra+ I+ G tr|F7ABK6|F7ABK6_MACMU 529 KCQKCGRAFAISSG 542 6**********876 PP == domain 5 score: -0.1 bits; conditional E-value: 1.6 TTEECCCCEEEETTTTEEE CS Trm112p 45 leldieegeLvCpncgraY 63 ++++ e + C +cg a+ tr|F7ABK6|F7ABK6_MACMU 547 MRTHTGERPFECQECGKAF 565 67888888899*****999 PP >> tr|A0A1D5QDL7|A0A1D5QDL7_MACMU Uncharacterized protein OS=Macaca mulatta OX=9544 GN=ZBTB17 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -0.1 0.0 1.6 1.8e+03 45 63 .. 322 340 .. 254 341 .. 0.79 2 ? 8.6 0.6 0.0029 3.3 41 63 .. 448 480 .. 388 481 .. 0.80 Alignments for each domain: == domain 1 score: -0.1 bits; conditional E-value: 1.6 TTEECCCCEEEETTTTEEE CS Trm112p 45 leldieegeLvCpncgraY 63 ++++ e + C++c a+ tr|A0A1D5QDL7|A0A1D5QDL7_MACMU 322 IRIHTGEKPFSCRECSKAF 340 77888899999***99988 PP == domain 2 score: 8.6 bits; conditional E-value: 0.0029 S..........CHHTTEECCCCEEEETTTTEEE CS Trm112p 41 y..........ellleldieegeLvCpncgraY 63 ++ l+++i +g L C++cg + tr|A0A1D5QDL7|A0A1D5QDL7_MACMU 448 CdkkfnqvgnlKAHLKIHIADGPLKCRECGKQF 480 245566666666679**************9766 PP >> tr|F7HA70|F7HA70_MACMU Zinc finger protein 460 OS=Macaca mulatta OX=9544 GN=ZNF460 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.4 0.5 0.13 1.4e+02 46 63 .. 244 261 .. 197 262 .. 0.72 2 ? 2.4 0.1 0.26 2.9e+02 47 63 .. 273 289 .. 266 292 .. 0.84 3 ? 1.0 0.3 0.71 8e+02 47 63 .. 357 373 .. 300 374 .. 0.81 4 ? 5.0 0.0 0.04 45 51 67 .. 389 405 .. 375 406 .. 0.83 Alignments for each domain: == domain 1 score: 3.4 bits; conditional E-value: 0.13 TEECCCCEEEETTTTEEE CS Trm112p 46 eldieegeLvCpncgraY 63 +++ + +vC++cgr++ tr|F7HA70|F7HA70_MACMU 244 RTHNGDKPFVCSECGRTF 261 467777889*******98 PP == domain 2 score: 2.4 bits; conditional E-value: 0.26 EECCCCEEEETTTTEEE CS Trm112p 47 ldieegeLvCpncgraY 63 ++ e +vC++cg a+ tr|F7HA70|F7HA70_MACMU 273 VHSGEKPFVCNECGKAF 289 56678889******999 PP == domain 3 score: 1.0 bits; conditional E-value: 0.71 EECCCCEEEETTTTEEE CS Trm112p 47 ldieegeLvCpncgraY 63 ++ e +vC+ cg a+ tr|F7HA70|F7HA70_MACMU 357 IHTGEKPFVCSQCGKAF 373 55667788999999888 PP == domain 4 score: 5.0 bits; conditional E-value: 0.04 CCEEEETTTTEEEEEET CS Trm112p 51 egeLvCpncgraYpIkd 67 e + C++cg a+ I++ tr|F7HA70|F7HA70_MACMU 389 EKPFECKECGKAFSIRK 405 66789**********96 PP >> tr|A0A1D5QJ30|A0A1D5QJ30_MACMU Uncharacterized protein OS=Macaca mulatta OX=9544 GN=LOC713120 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 8.0 0.0 0.0046 5.1 53 66 .. 67 80 .. 29 82 .. 0.85 2 ? 5.1 0.1 0.037 41 51 66 .. 93 108 .. 84 110 .. 0.77 3 ? -0.1 0.3 1.5 1.7e+03 55 64 .. 125 134 .. 116 134 .. 0.89 4 ? -1.4 0.2 3.8 4.2e+03 56 63 .. 168 175 .. 167 176 .. 0.85 Alignments for each domain: == domain 1 score: 8.0 bits; conditional E-value: 0.0046 EEEETTTTEEEEEE CS Trm112p 53 eLvCpncgraYpIk 66 ++vCp+cg a+ +k tr|A0A1D5QJ30|A0A1D5QJ30_MACMU 67 AFVCPECGKAFSVK 80 78*********997 PP == domain 2 score: 5.1 bits; conditional E-value: 0.037 CCEEEETTTTEEEEEE CS Trm112p 51 egeLvCpncgraYpIk 66 e + Cp+cgr++ k tr|A0A1D5QJ30|A0A1D5QJ30_MACMU 93 ERPFPCPECGRCFSLK 108 55567********876 PP == domain 3 score: -0.1 bits; conditional E-value: 1.5 EETTTTEEEE CS Trm112p 55 vCpncgraYp 64 +C cgr+++ tr|A0A1D5QJ30|A0A1D5QJ30_MACMU 125 QCAQCGRCFR 134 69*****996 PP == domain 4 score: -1.4 bits; conditional E-value: 3.8 ETTTTEEE CS Trm112p 56 CpncgraY 63 Cp+cg + tr|A0A1D5QJ30|A0A1D5QJ30_MACMU 168 CPRCGKSF 175 9***9887 PP >> tr|A0A1D5QI44|A0A1D5QI44_MACMU Zinc finger protein 425 OS=Macaca mulatta OX=9544 GN=ZNF425 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 2.8 6.8 0.19 2.2e+02 41 68 .] 297 344 .. 241 344 .. 0.70 2 ? 1.2 0.1 0.58 6.5e+02 54 63 .. 358 367 .. 352 368 .. 0.88 3 ? 2.5 3.0 0.24 2.7e+02 33 65 .. 383 425 .. 360 428 .. 0.52 4 ? -2.3 0.0 7.6 8.5e+03 54 63 .. 442 451 .. 437 455 .. 0.84 5 ? 5.4 1.2 0.03 34 31 64 .. 496 536 .. 442 536 .. 0.76 6 ? 2.9 6.1 0.17 1.9e+02 10 66 .. 612 678 .. 538 680 .. 0.71 7 ? -1.1 0.1 3 3.4e+03 47 61 .. 687 701 .. 683 704 .. 0.76 8 ? 0.1 0.6 1.3 1.5e+03 46 63 .. 714 731 .. 692 732 .. 0.67 Alignments for each domain: == domain 1 score: 2.8 bits; conditional E-value: 0.19 S....................CHHTTEECCCCEEEETTTTEEEEEETT CS Trm112p 41 y....................ellleldieegeLvCpncgraYpIkdG 68 + ++ l+l+ e ++Cp c+r+++ k G tr|A0A1D5QI44|A0A1D5QI44_MACMU 297 RgerpfccgecgrafvqqcelTEHLRLHSGEKPFQCPQCDRCFRLKRG 344 2666666666666677777775569999***************99987 PP == domain 2 score: 1.2 bits; conditional E-value: 0.58 EEETTTTEEE CS Trm112p 54 LvCpncgraY 63 + Cp+cgr + tr|A0A1D5QI44|A0A1D5QI44_MACMU 358 FHCPECGRSF 367 58******99 PP == domain 3 score: 2.5 bits; conditional E-value: 0.24 S-SS----S..........CHHTTEECCCCEEEETTTTEEEEE CS Trm112p 33 lpkekpedy..........ellleldieegeLvCpncgraYpI 65 ++ +++ ++ ++++ e + Cp+c+ ++ tr|A0A1D5QI44|A0A1D5QI44_MACMU 383 EKPFSCDECgrkfiykiklDEHIRVHTGEKPFSCPECNKSFRL 425 2222222224555555555344666777777777777777765 PP == domain 4 score: -2.3 bits; conditional E-value: 7.6 EEETTTTEEE CS Trm112p 54 LvCpncgraY 63 ++Cp+c r + tr|A0A1D5QI44|A0A1D5QI44_MACMU 442 FQCPECSRGF 451 58****9866 PP == domain 5 score: 5.4 bits; conditional E-value: 0.03 --S-SS----S.......CHHTTEECCCCEEEETTTTEEEE CS Trm112p 31 nelpkekpedy.......ellleldieegeLvCpncgraYp 64 +e p +++ + l+++ +e + C +cgr ++ tr|A0A1D5QI44|A0A1D5QI44_MACMU 496 KEFPCGECKKTfsqqsrlTQHLKVHNTEKPFSCAECGRSFR 536 44444444444777778844599***************995 PP == domain 6 score: 2.9 bits; conditional E-value: 0.17 -TTTHHC--HHHHHHHHHTT---S-SS----S.....................................CHHTTEECCC CS Trm112p 10 CpackgpLdwealvevaalglnelpkekpedy.....................................ellleldiee 51 Cp c + ++ ++++ e tr|A0A1D5QI44|A0A1D5QI44_MACMU 612 CPEC---------------------------QktfrlkgnlkshllqhsgqkpfscvmcgksftqqyrlTEHIRVHSGE 663 3333...........................244444444444444444666667777777777777885668899999 PP CEEEETTTTEEEEEE CS Trm112p 52 geLvCpncgraYpIk 66 ++Cp+c+ Y I+ tr|A0A1D5QI44|A0A1D5QI44_MACMU 664 KPFQCPECDKSYCIR 678 999999999999998 PP == domain 7 score: -1.1 bits; conditional E-value: 3 EECCCCEEEETTTTE CS Trm112p 47 ldieegeLvCpncgr 61 ++ e ++Cp+cg tr|A0A1D5QI44|A0A1D5QI44_MACMU 687 THSGERPFQCPECGK 701 566677789****96 PP == domain 8 score: 0.1 bits; conditional E-value: 1.3 TEECCCCEEEETTTTEEE CS Trm112p 46 eldieegeLvCpncgraY 63 l+ e + C +cgr + tr|A0A1D5QI44|A0A1D5QI44_MACMU 714 CLHSGERPFSCDECGRSF 731 456667778899999988 PP >> tr|A0A1D5RBU7|A0A1D5RBU7_MACMU Zinc finger protein OS=Macaca mulatta OX=9544 GN=PRDM5 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.3 0.2 0.00043 0.48 41 66 .. 175 211 .. 137 212 .. 0.77 2 ? -1.6 0.2 4.4 4.9e+03 47 60 .. 288 301 .. 253 303 .. 0.73 3 ? 4.6 0.1 0.052 58 28 64 .. 368 414 .. 313 415 .. 0.66 4 ? 1.2 0.9 0.6 6.7e+02 10 63 .. 434 498 .. 430 499 .. 0.65 5 ? 1.7 0.4 0.43 4.8e+02 33 65 .. 542 584 .. 518 586 .. 0.62 Alignments for each domain: == domain 1 score: 11.3 bits; conditional E-value: 0.00043 S...........CHHTTEECCCCEEEETTTTEEEEEE CS Trm112p 41 y...........ellleldieegeLvCpncgraYpIk 66 ++l++ ee e+ C+ncg +p+ tr|A0A1D5RBU7|A0A1D5RBU7_MACMU 175 SftsedilaehlQTLHQKPTEEKEFKCKNCGKKFPVT 211 23333344554577889999***************96 PP == domain 2 score: -1.6 bits; conditional E-value: 4.4 EECCCCEEEETTTT CS Trm112p 47 ldieegeLvCpncg 60 + + + +L+C+ c+ tr|A0A1D5RBU7|A0A1D5RBU7_MACMU 288 TGDPKKKLICSVCN 301 55556889999986 PP == domain 3 score: 4.6 bits; conditional E-value: 0.052 TT---S-SS----S............CHHTTEECCCCEEEETTTTEEEE CS Trm112p 28 lglnelpkekpedy............ellleldieegeLvCpncgraYp 64 + +e +++k++ + +++ ee ++C++c+ ++ tr|A0A1D5RBU7|A0A1D5RBU7_MACMU 368 VIHSEDKPYKCKLCgkgfahrnvyknH--KKTHSEERPFQCEECKALFR 414 333445666666668888888888662..579************99885 PP == domain 4 score: 1.2 bits; conditional E-value: 0.6 -TTTHH......C--HHHHHHHHHTT---S-SS----S............CHHTTEECCCCEEEETTTTEEE CS Trm112p 10 Cpackg......pLdwealvevaalglnelpkekpedy............ellleldieegeLvCpncgraY 63 C++c +L ++ v+v++++ +k+++e + +++ e e +Cp cg+ + tr|A0A1D5RBU7|A0A1D5RBU7_MACMU 434 CHHCDAtfkrkdTL--NVHVQVVHER---HKKYRCELCnkafvtpsvlrsH--KKTHTGEKEKICPYCGQKF 498 66666655455455..6667777633...3444444445558899888662..5799999999*****9987 PP == domain 5 score: 1.7 bits; conditional E-value: 0.43 S-SS----S............CHHTTEECCCCEEEETTTTEEEEE CS Trm112p 33 lpkekpedy............ellleldieegeLvCpncgraYpI 65 +++k+++ + +++ e ++C c++a+ tr|A0A1D5RBU7|A0A1D5RBU7_MACMU 542 EKPYKCSECskafsqkrgldeH--KRTHTGEKPFQCDVCDLAFSL 584 4444554446777777777541..5689999999******99975 PP >> tr|F7DX24|F7DX24_MACMU SH3 domain containing ring finger 1 OS=Macaca mulatta OX=9544 GN=SH3RF1 PE=4 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 6.5 5.5 0.013 15 3 60 .. 5 53 .. 3 55 .. 0.76 Alignments for each domain: == domain 1 score: 6.5 bits; conditional E-value: 0.013 GGCCC-B-TTTHHC--HHHHHHHHHTT---.S-SS----S...CHHTTEECCCCEEEETTTT CS Trm112p 3 lllniLaCpackgpLdwealvevaalglne.lpkekpedy...ellleldieegeLvCpncg 60 ll++L Cp+c +L ++ lp + ll ++ ++eL Cp+c+ tr|F7DX24|F7DX24_MACMU 5 ALLDLLECPVCLERL----------DASAKvLPCQH---TfckRCLLGIVGSRNELRCPECR 53 69*************..........12223344444...25559999**************8 PP >> tr|F7HHR3|F7HHR3_MACMU Zinc finger protein 707 OS=Macaca mulatta OX=9544 GN=ZNF707 PE=4 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 4.5 0.2 0.057 63 47 64 .. 197 214 .. 126 214 .. 0.70 2 ? 6.2 0.4 0.016 18 9 67 .. 205 245 .. 204 246 .. 0.85 3 ? 2.7 0.1 0.21 2.4e+02 48 66 .. 282 300 .. 248 302 .. 0.77 Alignments for each domain: == domain 1 score: 4.5 bits; conditional E-value: 0.057 EECCCCEEEETTTTEEEE CS Trm112p 47 ldieegeLvCpncgraYp 64 ++ + ++ Cp+cg++++ tr|F7HHR3|F7HHR3_MACMU 197 VHTGTKAFKCPECGQTFR 214 444558899999999985 PP == domain 2 score: 6.2 bits; conditional E-value: 0.016 B-TTTHHC--HHHHHHHHHTT---S-SS----SCHHTTEECCCCEEEETTTTEEEEEET CS Trm112p 9 aCpackgpLdwealvevaalglnelpkekpedyellleldieegeLvCpncgraYpIkd 67 +Cp c ++ +w++ +++ + + + e + C++cg+a+ kd tr|F7HHR3|F7HHR3_MACMU 205 KCPECGQTFRWASNLQRHQ--------------K----NHTHEKPFCCEACGQAFSLKD 245 6999999888888888888..............4....89999999********98876 PP == domain 3 score: 2.7 bits; conditional E-value: 0.21 ECCCCEEEETTTTEEEEEE CS Trm112p 48 dieegeLvCpncgraYpIk 66 + e ++C +cg a++ k tr|F7HHR3|F7HHR3_MACMU 282 HTGERPFYCADCGKAFRTK 300 4456779********9855 PP >> tr|F7GMN8|F7GMN8_MACMU Tripartite motif containing 9 OS=Macaca mulatta OX=9544 GN=TRIM9 PE=4 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 5.2 0.2 0.033 37 48 64 .. 2 18 .. 1 18 [. 0.88 2 ? 1.7 4.2 0.42 4.7e+02 8 60 .. 126 245 .. 124 247 .. 0.64 Alignments for each domain: == domain 1 score: 5.2 bits; conditional E-value: 0.033 ECCCCEEEETTTTEEEE CS Trm112p 48 dieegeLvCpncgraYp 64 +++e+eL Cp cg Y+ tr|F7GMN8|F7GMN8_MACMU 2 EEMEEELKCPVCGSFYR 18 689**********9885 PP == domain 2 score: 1.7 bits; conditional E-value: 0.42 -B-TTTHHC-..............-HHHHHHHHH.TT---S-SS----S...................................... CS Trm112p 8 LaCpackgpL..............dwealvevaa.lglnelpkekpedy...................................... 41 ++Cp+c+ L +e ++++ + + + l+ +++e++ tr|F7GMN8|F7GMN8_MACMU 126 ITCPQCHRSLilddrglrgfpknrVLEGVIDRYQqSKAAALKCQLCEKApkeatvmceqcdvfycdpcrlrchpprgplakhrlvpp 212 578888887777777777777777677777777777777777777777776666555555555555555555555555555555555 PP ..............CHHTTEECCCCEEEETTTT CS Trm112p 42 ..............ellleldieegeLvCpncg 60 +++ ++ e+ +++C c+ tr|F7GMN8|F7GMN8_MACMU 213 aqgrvsrrlsprkvSTCTDHELENHSMYCVQCK 245 555556666666666666677777777776665 PP >> tr|F6Q155|F6Q155_MACMU Zinc finger protein 680 OS=Macaca mulatta OX=9544 GN=ZNF680 PE=4 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 6.0 3.7 0.019 21 10 63 .. 210 273 .. 177 275 .. 0.73 2 ? -0.3 5.5 1.8 2e+03 28 63 .. 339 385 .. 290 506 .. 0.73 Alignments for each domain: == domain 1 score: 6.0 bits; conditional E-value: 0.019 -TTTHHC--HHHHHHHHH.TT---.S-SS----S............CHHTTEECCCCEEEETTTTEEE CS Trm112p 10 CpackgpLdwealvevaa.lglne.lpkekpedy............ellleldieegeLvCpncgraY 63 C c + L + ++e + +++ + +++k+e+ + +++iee + C++cg a+ tr|F6Q155|F6Q155_MACMU 210 CEECGKVL--NWFSELIKhKRIHMgEKPYKCEECgrafnqsstlikH--KKIHIEEKPFKCEECGKAF 273 44444444..3333333334566667777777779999999877772..4699************999 PP == domain 2 score: -0.3 bits; conditional E-value: 1.8 TT---.S-SS----S............CHHTTEECCCCEEEETTTTEEE CS Trm112p 28 lglne.lpkekpedy............ellleldieegeLvCpncgraY 63 +++ + +++k+e+ + +++ e + C++cg a+ tr|F6Q155|F6Q155_MACMU 339 KKIHTgEKPYKCEECgkafnqfanltrH--KKIHTGEKSYKCEECGKAF 385 4444445555555556666666666441..3455555666666666555 PP Internal pipeline statistics summary: ------------------------------------- Query model(s): 1 (68 nodes) Target sequences: 21211 (10888574 residues searched) Passed MSV filter: 1215 (0.0572816); expected 424.2 (0.02) Passed bias filter: 903 (0.0425723); expected 424.2 (0.02) Passed Vit filter: 114 (0.00537457); expected 21.2 (0.001) Passed Fwd filter: 42 (0.0019801); expected 0.2 (1e-05) Initial search space (Z): 21211 [actual number of targets] Domain search space (domZ): 19 [number of targets reported over threshold] # CPU time: 0.31u 0.01s 00:00:00.32 Elapsed: 00:00:00.09 # Mc/sec: 8226.92 // [ok]