# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/Trm112p.hmm.txt
# target sequence database: proteomes/Ornithorhynchus_anatinus.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: Trm112p [M=68]
Accession: PF03966.15
Description: Trm112p-like protein
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
0.00085 20.1 6.4 0.081 13.8 0.1 4.2 4 tr|F7BV92|F7BV92_ORNAN Zinc finger protein OS=Ornithorhynchu
0.0028 18.4 9.7 2 9.3 0.0 5.5 7 tr|F6QWR9|F6QWR9_ORNAN Uncharacterized protein OS=Ornithorhy
------ inclusion threshold ------
0.024 15.5 0.0 27 5.7 0.0 3.5 2 tr|F6SB19|F6SB19_ORNAN Tripartite motif containing 36 OS=Orn
0.028 15.2 2.5 20 6.1 0.0 3.3 3 tr|K7EA82|K7EA82_ORNAN Uncharacterized protein OS=Ornithorhy
0.055 14.3 0.0 0.13 13.1 0.0 2.0 1 tr|F6VKS5|F6VKS5_ORNAN Uncharacterized protein OS=Ornithorhy
0.055 14.3 0.3 0.11 13.3 0.3 1.5 1 tr|F6W8S8|F6W8S8_ORNAN Uncharacterized protein OS=Ornithorhy
0.16 12.8 0.2 0.16 12.8 0.2 6.5 6 tr|F6Z1P1|F6Z1P1_ORNAN Uncharacterized protein OS=Ornithorhy
0.24 12.3 5.4 5.9 7.8 0.4 3.7 3 tr|F7DW66|F7DW66_ORNAN Uncharacterized protein OS=Ornithorhy
0.4 11.6 2.1 1.2e+02 3.7 0.8 3.6 2 tr|F6VQC6|F6VQC6_ORNAN Uncharacterized protein OS=Ornithorhy
2 9.3 6.7 8.7 7.3 0.1 2.5 2 tr|F6T3F9|F6T3F9_ORNAN Chromosome 9 open reading frame 85 OS
2.8 8.9 8.4 60 4.6 0.2 4.2 4 tr|F6Q038|F6Q038_ORNAN Uncharacterized protein OS=Ornithorhy
5.5 7.9 5.5 15 6.5 5.5 1.8 1 tr|F6WWJ7|F6WWJ7_ORNAN SH3 domain containing ring finger 1 O
Domain annotation for each sequence (and alignments):
>> tr|F7BV92|F7BV92_ORNAN Zinc finger protein OS=Ornithorhynchus anatinus OX=9258 GN=PRDM5 PE=4 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 13.8 0.1 4.5e-05 0.081 37 67 .. 186 216 .. 135 216 .. 0.82
2 ? 5.5 0.2 0.017 30 17 64 .. 322 387 .. 251 388 .. 0.71
3 ? -2.2 0.0 4.4 8e+03 48 63 .. 399 414 .. 394 418 .. 0.82
4 ? 1.0 0.3 0.44 7.9e+02 35 63 .. 433 471 .. 404 472 .. 0.63
Alignments for each domain:
== domain 1 score: 13.8 bits; conditional E-value: 4.5e-05
----SCHHTTEECCCCEEEETTTTEEEEEET CS
Trm112p 37 kpedyellleldieegeLvCpncgraYpIkd 67
++e+ ++l++ ee e+ C+ncg +p+k+
tr|F7BV92|F7BV92_ORNAN 186 LSEHLQTLHQKPSEEKEFKCRNCGKKFPVKQ 216
3444478889999****************85 PP
== domain 2 score: 5.5 bits; conditional E-value: 0.017
-......-HHHHHHHHH.TT---.S-SS----S............CHHTTEECCCCEEEETTTTEEEE CS
Trm112p 17 L......dwealvevaa.lglne.lpkekpedy............ellleldieegeLvCpncgraYp 64
++ l +v+a + + + +++k+ + +++ ee ++C++c+ ++
tr|F7BV92|F7BV92_ORNAN 322 IcevcnkSFKRLDQVTAhKIIHSeDKPYKCRLCgkgfahrnvyknH--KKTHSEERPFQCEECKALFR 387
0444444444445555555555557777777779999999999762..579************99885 PP
== domain 3 score: -2.2 bits; conditional E-value: 4.4
ECCCCEEEETTTTEEE CS
Trm112p 48 dieegeLvCpncgraY 63
+ e ++ C +c+ ++
tr|F7BV92|F7BV92_ORNAN 399 HNSERTFKCDHCDATF 414
67789999*9999877 PP
== domain 4 score: 1.0 bits; conditional E-value: 0.44
SS----S............CHHTTEECCCCEEEETTTTEEE CS
Trm112p 35 kekpedy............ellleldieegeLvCpncgraY 63
k+k++ + +++ e e +Cp cg+ +
tr|F7BV92|F7BV92_ORNAN 433 KYKCDLCdkafvtpsvlksH--KKTHTGEKEKICPYCGQKF 471
33333334447777777542..56899999999****9987 PP
>> tr|F6QWR9|F6QWR9_ORNAN Uncharacterized protein OS=Ornithorhynchus anatinus OX=9258 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -2.3 1.0 4.8 8.6e+03 56 64 .. 40 48 .. 37 49 .. 0.92
2 ? 2.3 0.1 0.18 3.2e+02 53 63 .. 67 77 .. 59 78 .. 0.88
3 ! 9.3 0.0 0.0011 2 48 64 .. 90 106 .. 80 106 .. 0.89
4 ? -2.3 0.1 4.7 8.6e+03 54 63 .. 124 133 .. 114 134 .. 0.84
5 ? -2.4 0.1 5.2 9.4e+03 54 63 .. 153 162 .. 151 163 .. 0.87
6 ! 7.8 0.0 0.0032 5.8 9 63 .. 274 366 .. 271 367 .. 0.64
7 ? -1.7 0.2 3 5.5e+03 47 63 .. 406 422 .. 381 423 .. 0.67
Alignments for each domain:
== domain 1 score: -2.3 bits; conditional E-value: 4.8
ETTTTEEEE CS
Trm112p 56 CpncgraYp 64
C +cgr +p
tr|F6QWR9|F6QWR9_ORNAN 40 CVRCGRRFP 48
99******9 PP
== domain 2 score: 2.3 bits; conditional E-value: 0.18
EEEETTTTEEE CS
Trm112p 53 eLvCpncgraY 63
+L Cp+cgr +
tr|F6QWR9|F6QWR9_ORNAN 67 VLGCPECGRRF 77
588******98 PP
== domain 3 score: 9.3 bits; conditional E-value: 0.0011
ECCCCEEEETTTTEEEE CS
Trm112p 48 dieegeLvCpncgraYp 64
++e g+L+C +cgr +p
tr|F6QWR9|F6QWR9_ORNAN 90 HVEGGQLTCQRCGRDFP 106
7899**********998 PP
== domain 4 score: -2.3 bits; conditional E-value: 4.7
EEETTTTEEE CS
Trm112p 54 LvCpncgraY 63
+ C++c r++
tr|F6QWR9|F6QWR9_ORNAN 124 FACTDCERCF 133
5799**9998 PP
== domain 5 score: -2.4 bits; conditional E-value: 5.2
EEETTTTEEE CS
Trm112p 54 LvCpncgraY 63
++C cg+ +
tr|F6QWR9|F6QWR9_ORNAN 153 FICGGCGQSF 162
79*****998 PP
== domain 6 score: 7.8 bits; conditional E-value: 0.0032
B-TTTHHC-...............................-HHHHHHHHHTT---S-SS----S....................... CS
Trm112p 9 aCpackgpL...............................dwealvevaalglnelpkekpedy....................... 41
Cp c +pL +a +
tr|F6QWR9|F6QWR9_ORNAN 274 ICPKCAQPLrhgprplsasshqkdqgsgqwapaarrrelpSDPARG-----------------Ageesevmnqeapkapgscpapsp 343
5999999888888877888888888888666666666555333333.................133333333333333344448888 PP
.....CHHTTEECCCCEEEETTTTEEE CS
Trm112p 42 .....ellleldieegeLvCpncgraY 63
+ l + g +vCp+cg +
tr|F6QWR9|F6QWR9_ORNAN 344 aplgpQ----LPVAAGHFVCPECGKRF 366
855654....99999********9887 PP
== domain 7 score: -1.7 bits; conditional E-value: 3
EECCCCEEEETTTTEEE CS
Trm112p 47 ldieegeLvCpncgraY 63
++ e + C +c r +
tr|F6QWR9|F6QWR9_ORNAN 406 HHTGERPFRCAECERRF 422
45556667788888877 PP
>> tr|F6SB19|F6SB19_ORNAN Tripartite motif containing 36 OS=Ornithorhynchus anatinus OX=9258 GN=TRIM36 PE=4 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 5.6 0.0 0.017 30 47 63 .. 12 28 .. 4 29 .. 0.86
2 ? 5.7 0.0 0.015 27 7 61 .. 101 218 .. 99 285 .. 0.74
Alignments for each domain:
== domain 1 score: 5.6 bits; conditional E-value: 0.017
EECCCCEEEETTTTEEE CS
Trm112p 47 ldieegeLvCpncgraY 63
++ +e eL+Cp c+ +
tr|F6SB19|F6SB19_ORNAN 12 FKNIERELICPTCKELF 28
67899*********987 PP
== domain 2 score: 5.7 bits; conditional E-value: 0.015
C-B-TTTHH..C-...............................................................-HHHHHHHHH. CS
Trm112p 7 iLaCpackg..pL...............................................................dwealvevaa. 27
+L Cpack+ L w + + +
tr|F6SB19|F6SB19_ORNAN 101 VLPCPACKHdvDLgergihglfrnftleniveryrqaaraataimcdhckstpqeytkscidcnanfcnecfkvnhPWGTVKAQHEy 187
688999999664477777888888877777775555555555555555555555555555555555555555555555555555555 PP
TT---S-SS----SCHHTTEECCCCEEEETTTTE CS
Trm112p 28 lglnelpkekpedyellleldieegeLvCpncgr 61
+g +++ ++k + e++ e+ ++C+ c+r
tr|F6SB19|F6SB19_ORNAN 188 VGSTTISRPKV---IMCPEHEAEKVNMYCELCKR 218
55555333333...34556788888888888886 PP
>> tr|K7EA82|K7EA82_ORNAN Uncharacterized protein OS=Ornithorhynchus anatinus OX=9258 GN=LOC103166666 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 6.1 0.0 0.011 20 42 60 .. 30 46 .. 8 48 .. 0.78
2 ? 5.3 0.1 0.02 37 36 63 .. 69 106 .. 52 109 .. 0.72
3 ? 2.1 0.1 0.2 3.6e+02 53 64 .. 124 135 .. 111 136 .. 0.80
Alignments for each domain:
== domain 1 score: 6.1 bits; conditional E-value: 0.011
CHHTTEECCCCEEEETTTT CS
Trm112p 42 ellleldieegeLvCpncg 60
+ +++++ee ++ Cp+cg
tr|K7EA82|K7EA82_ORNAN 30 H--MRTHQEERKFLCPDCG 46
4..89*************8 PP
== domain 2 score: 5.3 bits; conditional E-value: 0.02
S----S..............CHHTTEECCCCEEEETTTTEEE CS
Trm112p 36 ekpedy..............ellleldieegeLvCpncgraY 63
+ pe++ + ++e+ ++vC cg a+
tr|K7EA82|K7EA82_ORNAN 69 QCPECPyrtnradalrvhreT----RHRETRAFVCDQCGKAF 106
555555666666666665543....68899**********99 PP
== domain 3 score: 2.1 bits; conditional E-value: 0.2
EEEETTTTEEEE CS
Trm112p 53 eLvCpncgraYp 64
+ vC+ c+ra++
tr|K7EA82|K7EA82_ORNAN 124 AYVCRLCRRAFR 135
559*******96 PP
>> tr|F6VKS5|F6VKS5_ORNAN Uncharacterized protein OS=Ornithorhynchus anatinus OX=9258 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 13.1 0.0 7.2e-05 0.13 17 63 .. 114 174 .. 8 175 .. 0.75
Alignments for each domain:
== domain 1 score: 13.1 bits; conditional E-value: 7.2e-05
-........-HHHHHHHHHTT---S-SS----S....CHHTTEECCC...CEEEETTTTEEE CS
Trm112p 17 L........dwealvevaalglnelpkekpedy....ellleldiee...geLvCpncgraY 63
+w++ ++v ++ ++ +++ + +y + ll++++++ L Cp+c+r++
tr|F6VKS5|F6VKS5_ORNAN 114 TcdecgkvfRWNVSLKVHRRIHTREKPYECPKYgqrfH-LLKHQRVHggeKHLWCPDCDRVF 174
04444444489999999993333377777777789974.6666666544489********99 PP
>> tr|F6W8S8|F6W8S8_ORNAN Uncharacterized protein OS=Ornithorhynchus anatinus OX=9258 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 13.3 0.3 6.1e-05 0.11 10 68 .] 113 180 .. 111 180 .. 0.79
Alignments for each domain:
== domain 1 score: 13.3 bits; conditional E-value: 6.1e-05
-TTTHHC--HHHHHHHHH.TT---.S-SS----S...............CHHTTEECCCCEEEETTTTEEEEEETT CS
Trm112p 10 CpackgpLdwealvevaa.lglne.lpkekpedy...............ellleldieegeLvCpncgraYpIkdG 68
C +c +L aa g++ p kp+ + ++ ++ ++g+L+Cp c+ +Y +k G
tr|F6W8S8|F6W8S8_ORNAN 113 CTICMERL--------AApSGYKGpQPNVKPDLVgklsrcghiyhlhclVAMYNNGNKDGSLQCPTCKTIYGVKTG 180
55566666........6667777777888888889999999999997776677778888************99876 PP
>> tr|F6Z1P1|F6Z1P1_ORNAN Uncharacterized protein OS=Ornithorhynchus anatinus OX=9258 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -0.5 0.5 1.3 2.4e+03 41 63 .. 197 229 .. 165 231 .. 0.49
2 ? -0.3 2.4 1.1 2e+03 10 64 .. 222 286 .. 220 286 .. 0.51
3 ? 2.0 0.5 0.22 4e+02 9 63 .. 389 425 .. 339 456 .. 0.65
4 ? 12.8 0.2 9e-05 0.16 38 63 .. 502 537 .. 472 538 .. 0.65
5 ? -0.8 0.0 1.6 2.9e+03 43 63 .. 596 619 .. 564 620 .. 0.71
6 ? 0.9 0.0 0.46 8.3e+02 10 61 .. 661 731 .. 647 734 .. 0.63
Alignments for each domain:
== domain 1 score: -0.5 bits; conditional E-value: 1.3
S............CHHTTEECCCCEEEETTTTEEE CS
Trm112p 41 y............ellleldieegeLvCpncgraY 63
+ +++ e Cp+cg ++
tr|F6Z1P1|F6Z1P1_ORNAN 197 CgksftqsshlvqH--QRTHTGEKPYKCPDCGKCF 229
33555555333221..2244444666788888776 PP
== domain 2 score: -0.3 bits; conditional E-value: 1.1
-TTTHHC--HHHHHHHHH.TT---S-SS----S.......CHHTTEECCC...CEEEETTTTEEEE CS
Trm112p 10 CpackgpLdwealvevaa.lglnelpkekpedy.......ellleldiee...geLvCpncgraYp 64
Cp c + w++ + + + ++ +++k+++ + l+++++ + C +c+ra++
tr|F6Z1P1|F6Z1P1_ORNAN 222 CPDCGKCFSWSSNLVQHQrTHTG-EKPYKCTECekaftqsTNLIKHQRSHsgeKPYKCGECRRAFY 286
77777744444433444423333.333333333355777744444444443337788999999996 PP
== domain 3 score: 2.0 bits; conditional E-value: 0.22
B-TTTHH..C--HHHHHHHHH.TT---S-SS----SCHHTTEECCCCEEEETTTTEEE CS
Trm112p 9 aCpackg..pLdwealvevaa.lglnelpkekpedyellleldieegeLvCpncgraY 63
+Cp+c + + ++a + + + ++ e p Cp+cg +
tr|F6Z1P1|F6Z1P1_ORNAN 389 KCPVCGKtfT--LSATLLRHQrTHTGERPY-------------------KCPECGKSF 425
4555555222..233333333233333333...................344444433 PP
== domain 4 score: 12.8 bits; conditional E-value: 9e-05
---S............CHHTTEECCCCEEEETTTTEEE CS
Trm112p 38 pedy............ellleldieegeLvCpncgraY 63
+ d + ++++++e+ +vCp+cgra+
tr|F6Z1P1|F6Z1P1_ORNAN 502 CPDCgksfsqssnlitH--VRTHMDENLFVCPDCGRAF 537
33334667777777554..88****************9 PP
== domain 5 score: -0.8 bits; conditional E-value: 1.6
HHTTEECCC...CEEEETTTTEEE CS
Trm112p 43 llleldiee...geLvCpncgraY 63
lll+++ + g + Cp cg a+
tr|F6Z1P1|F6Z1P1_ORNAN 596 LLLQHQLAHglpGPFGCPQCGKAF 619
566666666666778899999998 PP
== domain 6 score: 0.9 bits; conditional E-value: 0.46
-TTTHH....C--HHHHHHHHHTT---.S-SS----S.........................CHHTTEECCCCEEEETTTTE CS
Trm112p 10 Cpackg....pLdwealvevaalglne.lpkekpedy.........................ellleldieegeLvCpncgr 61
C+ c +L alv+ ++ + ++ p+++ + ++ e vCp+cg
tr|F6Z1P1|F6Z1P1_ORNAN 661 CSDCGAsfldRL---ALVRHQE----ShAREGAPDRPagtpghpdgeavhqgedggppgdvpK----THPGEKPYVCPECGE 731
554544544444...5554444....2233333333333346667777777777777766544....888889999999996 PP
>> tr|F7DW66|F7DW66_ORNAN Uncharacterized protein OS=Ornithorhynchus anatinus OX=9258 PE=4 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 7.8 0.4 0.0033 5.9 46 64 .. 246 264 .. 195 266 .. 0.64
2 ? -1.6 0.0 2.9 5.3e+03 55 63 .. 283 291 .. 276 292 .. 0.85
3 ? 4.0 0.6 0.051 93 47 63 .. 303 319 .. 282 320 .. 0.67
Alignments for each domain:
== domain 1 score: 7.8 bits; conditional E-value: 0.0033
TEECCCCEEEETTTTEEEE CS
Trm112p 46 eldieegeLvCpncgraYp 64
+++ e ++vCp+cg +++
tr|F7DW66|F7DW66_ORNAN 246 RVHTGEKSFVCPDCGKTFR 264
356667*********9996 PP
== domain 2 score: -1.6 bits; conditional E-value: 2.9
EETTTTEEE CS
Trm112p 55 vCpncgraY 63
Cp+cg ++
tr|F7DW66|F7DW66_ORNAN 283 SCPDCGKTF 291
599999887 PP
== domain 3 score: 4.0 bits; conditional E-value: 0.051
EECCCCEEEETTTTEEE CS
Trm112p 47 ldieegeLvCpncgraY 63
++ e vCp cgra+
tr|F7DW66|F7DW66_ORNAN 303 VHTGEKPYVCPGCGRAF 319
556667779*******9 PP
>> tr|F6VQC6|F6VQC6_ORNAN Uncharacterized protein OS=Ornithorhynchus anatinus OX=9258 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 3.7 0.8 0.064 1.2e+02 45 63 .. 359 377 .. 286 378 .. 0.75
2 ? 3.4 0.0 0.079 1.4e+02 48 63 .. 390 405 .. 381 406 .. 0.81
Alignments for each domain:
== domain 1 score: 3.7 bits; conditional E-value: 0.064
TTEECCCCEEEETTTTEEE CS
Trm112p 45 leldieegeLvCpncgraY 63
l+++ e + Cp+cgra+
tr|F6VQC6|F6VQC6_ORNAN 359 LRTHTGERPFPCPDCGRAF 377
5667777777788888887 PP
== domain 2 score: 3.4 bits; conditional E-value: 0.079
ECCCCEEEETTTTEEE CS
Trm112p 48 dieegeLvCpncgraY 63
+ e + Cp+cgra+
tr|F6VQC6|F6VQC6_ORNAN 390 HTGERPFACPDCGRAF 405
55666788*******9 PP
>> tr|F6T3F9|F6T3F9_ORNAN Chromosome 9 open reading frame 85 OS=Ornithorhynchus anatinus OX=9258 GN=C9orf85 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 4.1 2.3 0.046 84 9 61 .. 44 91 .. 7 93 .. 0.81
2 ? 7.3 0.1 0.0048 8.7 31 57 .. 116 143 .. 96 145 .. 0.77
Alignments for each domain:
== domain 1 score: 4.1 bits; conditional E-value: 0.046
B-TTTHHC--HHHHHHHHHTT---S-SS----S.CHHTTEECCCCEEEETTTTE CS
Trm112p 9 aCpackgpLdwealvevaalglnelpkekpedy.ellleldieegeLvCpncgr 61
+C +ck L+w + + + p kp++ + l ++++++ ++C+ c +
tr|F6T3F9|F6T3F9_ORNAN 44 VCKHCKEILEWRVKFSKYK------PLSKPKKCvKCLQKTVKDSYHIICRPCAH 91
6888888786666555554......4445544457777899999******9976 PP
== domain 2 score: 7.3 bits; conditional E-value: 0.0048
--.S-SS----SCHHTTEECCCCEEEET CS
Trm112p 31 ne.lpkekpedyellleldieegeLvCp 57
+e p+ + +++ +e+d++e eL C+
tr|F6T3F9|F6T3F9_ORNAN 116 TEnGPDSSCRRRSGRVETDEDEDELHCE 143
3337888888888899***********7 PP
>> tr|F6Q038|F6Q038_ORNAN Uncharacterized protein OS=Ornithorhynchus anatinus OX=9258 PE=4 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 4.6 0.2 0.033 60 46 63 .. 423 440 .. 388 441 .. 0.72
2 ? -2.5 0.1 5.3 9.6e+03 52 60 .. 485 493 .. 460 496 .. 0.60
3 ? 4.4 0.2 0.038 69 47 63 .. 598 614 .. 573 615 .. 0.82
4 ? 2.0 0.0 0.21 3.8e+02 47 63 .. 626 642 .. 616 643 .. 0.80
Alignments for each domain:
== domain 1 score: 4.6 bits; conditional E-value: 0.033
TEECCCCEEEETTTTEEE CS
Trm112p 46 eldieegeLvCpncgraY 63
+++ e LvC+ c+r++
tr|F6Q038|F6Q038_ORNAN 423 RIHTGEKPLVCKVCRRTF 440
37788999********99 PP
== domain 2 score: -2.5 bits; conditional E-value: 5.3
CEEEETTTT CS
Trm112p 52 geLvCpncg 60
+vC++cg
tr|F6Q038|F6Q038_ORNAN 485 KPFVCEKCG 493
446777776 PP
== domain 3 score: 4.4 bits; conditional E-value: 0.038
EECCCCEEEETTTTEEE CS
Trm112p 47 ldieegeLvCpncgraY 63
++ e LvC+ c+ra+
tr|F6Q038|F6Q038_ORNAN 598 VHTGEKPLVCKICKRAF 614
6778899*********9 PP
== domain 4 score: 2.0 bits; conditional E-value: 0.21
EECCCCEEEETTTTEEE CS
Trm112p 47 ldieegeLvCpncgraY 63
+ e +vC+ cgr +
tr|F6Q038|F6Q038_ORNAN 626 RHTGEKPFVCRVCGRSF 642
56667889*******98 PP
>> tr|F6WWJ7|F6WWJ7_ORNAN SH3 domain containing ring finger 1 OS=Ornithorhynchus anatinus OX=9258 GN=SH3RF1 PE=4 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 6.5 5.5 0.0082 15 3 60 .. 5 53 .. 3 55 .. 0.76
Alignments for each domain:
== domain 1 score: 6.5 bits; conditional E-value: 0.0082
GGCCC-B-TTTHHC--HHHHHHHHHTT---.S-SS----S...CHHTTEECCCCEEEETTTT CS
Trm112p 3 lllniLaCpackgpLdwealvevaalglne.lpkekpedy...ellleldieegeLvCpncg 60
ll++L Cp+c +L ++ lp + ll ++ ++eL Cp+c+
tr|F6WWJ7|F6WWJ7_ORNAN 5 ALLDLLECPVCLERL----------DASAKvLPCQH---TfckRCLLGIVGSRNELRCPECR 53
69*************..........12223344444...25559999**************8 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (68 nodes)
Target sequences: 21677 (8259262 residues searched)
Passed MSV filter: 883 (0.0407344); expected 433.5 (0.02)
Passed bias filter: 664 (0.0306315); expected 433.5 (0.02)
Passed Vit filter: 81 (0.00373668); expected 21.7 (0.001)
Passed Fwd filter: 17 (0.000784241); expected 0.2 (1e-05)
Initial search space (Z): 21677 [actual number of targets]
Domain search space (domZ): 12 [number of targets reported over threshold]
# CPU time: 0.15u 0.01s 00:00:00.16 Elapsed: 00:00:00.06
# Mc/sec: 9360.50
//
[ok]