# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/UPF0020.hmm.txt
# target sequence database: proteomes/Nematostella_vectensis.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: UPF0020 [M=197]
Accession: PF01170.17
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.9e-36 123.9 0.0 1.3e-33 116.8 0.0 2.3 1 tr|A7S7Y0|A7S7Y0_NEMVE Predicted protein OS=Nematostella vec
1e-09 38.8 0.1 1.2e-08 35.3 0.1 2.4 1 tr|A7RQD1|A7RQD1_NEMVE Predicted protein OS=Nematostella vec
3.1e-08 34.0 0.1 2.3e-07 31.1 0.1 2.1 1 tr|A7SAF9|A7SAF9_NEMVE Predicted protein OS=Nematostella vec
1.1e-07 32.1 0.0 0.0022 18.1 0.0 2.4 2 tr|A8DW28|A8DW28_NEMVE Predicted protein OS=Nematostella vec
9.5e-06 25.9 0.0 1.6e-05 25.1 0.0 1.3 1 tr|A7RQR0|A7RQR0_NEMVE Predicted protein OS=Nematostella vec
0.0013 18.9 0.1 0.007 16.5 0.1 2.1 1 tr|A7RYK6|A7RYK6_NEMVE Predicted protein OS=Nematostella vec
0.0013 18.9 0.1 0.007 16.5 0.1 2.0 1 tr|A7T8E8|A7T8E8_NEMVE Predicted protein OS=Nematostella vec
0.0018 18.4 0.0 0.0045 17.1 0.0 1.7 1 tr|A7RVI7|A7RVI7_NEMVE 2-methoxy-6-polyprenyl-1,4-benzoquino
------ inclusion threshold ------
0.034 14.3 0.0 0.047 13.8 0.0 1.3 1 tr|A7SJF3|A7SJF3_NEMVE Predicted protein OS=Nematostella vec
0.043 13.9 0.3 0.19 11.8 0.3 1.9 1 tr|A7SVE2|A7SVE2_NEMVE Predicted protein OS=Nematostella vec
0.058 13.5 0.0 0.092 12.9 0.0 1.3 1 tr|A7TBN7|A7TBN7_NEMVE Predicted protein (Fragment) OS=Nemat
0.065 13.4 0.2 0.23 11.6 0.2 1.8 1 tr|A7SVE3|A7SVE3_NEMVE Predicted protein OS=Nematostella vec
0.069 13.3 0.2 0.24 11.5 0.2 1.8 1 tr|A7SY09|A7SY09_NEMVE Predicted protein OS=Nematostella vec
0.094 12.8 0.0 0.26 11.4 0.0 1.7 2 tr|A7RW11|A7RW11_NEMVE rRNA adenine N(6)-methyltransferase O
0.11 12.6 0.3 0.41 10.7 0.3 1.8 1 tr|A7SY10|A7SY10_NEMVE Predicted protein OS=Nematostella vec
0.11 12.6 0.0 0.18 11.9 0.0 1.3 1 tr|A7RHA8|A7RHA8_NEMVE Predicted protein OS=Nematostella vec
0.15 12.1 0.0 0.23 11.5 0.0 1.3 1 tr|A7SJ10|A7SJ10_NEMVE Predicted protein OS=Nematostella vec
Domain annotation for each sequence (and alignments):
>> tr|A7S7Y0|A7S7Y0_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g167545 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 116.8 0.0 8.9e-37 1.3e-33 5 195 .. 196 369 .. 192 371 .. 0.87
Alignments for each domain:
== domain 1 score: 116.8 bits; conditional E-value: 8.9e-37
-SS---SS-HHHHHHHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHH CS
UPF0020 5 efngpapLketLAaalvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqg 91
e +gp++Lk++LA++l++la++k g++ DPmCG+G+i+IEa l + +++ ++ D + + +
tr|A7S7Y0|A7S7Y0_NEMVE 196 EHFGPTTLKSSLAYCLLKLADIKTGDVVCDPMCGGGSIPIEALLNWPLCVH------------------------ICGDHHELAPSR 258
4578**********************************************5........................788888888888 PP
HHHHHHHTT-GG....GEEEEE--GGG--STTS---EEEE----------HHHHHHHHHHHHHHHHHH-TT...-EEEEEESSHHHH CS
UPF0020 92 areNaekagvgd....liefsqadaakLrlkegevdvivtnpPYGerlgskkalekLYseflrelkrvlrgg.grlvlltsenkale 173
+ N+++ + ++ +++q+d+++L+ k++++dvivt++P+G++ gsk+++++LY++ l+el+rv+ + gr+v+lt+++kal+
tr|A7S7Y0|A7S7Y0_NEMVE 259 TLANLSALTSKQnrklPLDIYQWDVCNLPFKTNSMDVIVTDLPFGKKSGSKQNNWSLYPQALDELARVCPPKtGRAVILTHDKKALA 345
88888776655411116899*********9999************************************9988************** PP
HCC---..ESEEEEEEETTEEEEE CS
UPF0020 174 kaleer..alrkvkeknvklglll 195
k l+++ ++ + +v++g+l+
tr|A7S7Y0|A7S7Y0_NEMVE 346 KTLQRMqkWWKVKLTLWVNMGGLQ 369
****99844455556799998876 PP
>> tr|A7RQD1|A7RQD1_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g161519 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 35.3 0.1 8.4e-12 1.2e-08 3 136 .. 183 310 .. 182 317 .. 0.74
Alignments for each domain:
== domain 1 score: 35.3 bits; conditional E-value: 8.4e-12
SS-SS---SS-HHHHHHHHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHH CS
UPF0020 3 yRefngpapLketLAaalvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvv 89
R+f g++++ + L+ + + +++pg+ ++DP+ G+G il+ a g +++ + ++ ++ + k ++ ++++
tr|A7RQD1|A7RQD1_NEMVE 183 TRHFIGNTSMDPLLSFLMANQGKARPGTLIFDPFVGTGNILLACAHFGGHVIGSDIDKNLVQ--G-------RGCKSSRANCKWKAR 260
69**************************************************4444222222..2.......222223333333333 PP
.HHHHHHHHHTT-GGG.EEEEE--GGG..--STTS---EEEE--------- CS
UPF0020 90 .qgareNaekagvgdl.iefsqadaak..LrlkegevdvivtnpPYGerlg 136
+ r+N ++ag+++l +++ ada Lr ++ +d+i+t+pPYG r g
tr|A7RQD1|A7RQD1_NEMVE 261 dEVMRTNFRQAGLEQLfVDAIIADASRsvLR-ATPIFDAIITDPPYGVREG 310
13458999***99985367777777542255.7779***********9966 PP
>> tr|A7SAF9|A7SAF9_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g243959 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 31.1 0.1 1.6e-10 2.3e-07 42 132 .. 66 129 .. 41 199 .. 0.83
Alignments for each domain:
== domain 1 score: 31.1 bits; conditional E-value: 1.6e-10
HHHHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE--GGG--STTS---EEEE- CS
UPF0020 42 ilIEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqadaakLrlkegevdvivtn 128
+I a ++ ++++D+d+ +++ar Nae +gv+d+ief+ d++++ ++ + dvi
tr|A7SAF9|A7SAF9_NEMVE 66 NAIQFAFTCER--------------------------VIAIDIDPVKIDCARHNAEIYGVADRIEFVLGDFRQIV-PQLKADVIFLS 125
44444444444..........................559***********************************.9999******* PP
---- CS
UPF0020 129 pPYG 132
pP+G
tr|A7SAF9|A7SAF9_NEMVE 126 PPWG 129
***9 PP
>> tr|A8DW28|A8DW28_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g225887 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 18.1 0.0 1.6e-06 0.0022 20 103 .. 1 93 [. 1 116 [. 0.74
2 ! 11.8 0.0 0.00014 0.2 110 143 .. 130 163 .. 109 169 .. 0.72
Alignments for each domain:
== domain 1 score: 18.1 bits; conditional E-value: 1.6e-06
HHHHTT--TTS-EEETT-TTSHHHHHHHHHHTT--TTTT----SS...........HHHHHHHHHH..HH--EEEEES-HHHHHHHH CS
UPF0020 20 lvrlagwkpgepllDPmCGsGtilIEaallganiapgllrefvle...........lkaeaeeear..aelklygsDldrrvvqgar 93
+v++ + ++ ++ lD CGsG++l+ ++ +++ + +e e++e+ r ae ++yg+D+d+ + ++ar
tr|A8DW28|A8DW28_NEMVE 1 MVEMLNPNEKTRVLDXACGSGGFLV---MVLEHVRKQIAKELY-PdledvllaekfNTYEVNERVRqyAETNIYGFDFDPDLKKAAR 83
889999999***************9...444444433333333.2467788877655556666666555666*************** PP
HHHHHTT-GG CS
UPF0020 94 eNaekagvgd 103
N ag g+
tr|A8DW28|A8DW28_NEMVE 84 MNMVMAGDGH 93
**99998665 PP
== domain 2 score: 11.8 bits; conditional E-value: 0.00014
--GGG--STTS---EEEE----------HHHHHH CS
UPF0020 110 adaakLrlkegevdvivtnpPYGerlgskkalek 143
d+ ++g++d+i tnpP+G +++ +k++ +
tr|A8DW28|A8DW28_NEMVE 130 IDNNYTDDARGKFDMIFTNPPFGAKVKVEKEIAD 163
444434467889*************999998765 PP
>> tr|A7RQR0|A7RQR0_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g90326 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 25.1 0.0 1.1e-08 1.6e-05 74 131 .. 72 129 .. 53 134 .. 0.92
Alignments for each domain:
== domain 1 score: 25.1 bits; conditional E-value: 1.1e-08
HHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE--GGG--STTS---EEEE---- CS
UPF0020 74 raelklygsDldrrvvqgareNaekagvgdliefsqadaakLrlkegevdvivtnpPY 131
+++++ +++D + +v+ +r Na+++g++ + e++ + +L+ + +++d+iv+npPY
tr|A7RQR0|A7RQR0_NEMVE 72 NEKASGVAIDVSPVAVKLTRLNAHRCGMNCRLELYHCPIGELNMTLKKFDMIVSNPPY 129
56777899***********************************66679********** PP
>> tr|A7RYK6|A7RYK6_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g241579 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 16.5 0.1 4.9e-06 0.007 44 130 .. 89 152 .. 58 162 .. 0.77
Alignments for each domain:
== domain 1 score: 16.5 bits; conditional E-value: 4.9e-06
HHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE--GGG--.STTS---EEEE-- CS
UPF0020 44 IEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqadaakLr.lkegevdvivtnp 129
IE al++ ++++++ D+++++v+ eNa+ gv+ ++++ qad+ + lk ++d+i p
tr|A7RYK6|A7RYK6_NEMVE 89 IEFALQVP------------------------QAEVWATDINPAAVDDVAENARLHGVETSVTAIQADVFDCDdLKGMKFDMIFFRP 151
44444444........................4559*********************************999944444999998888 PP
- CS
UPF0020 130 P 130
P
tr|A7RYK6|A7RYK6_NEMVE 152 P 152
8 PP
>> tr|A7T8E8|A7T8E8_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g223766 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 16.5 0.1 4.8e-06 0.007 44 130 .. 89 152 .. 58 162 .. 0.77
Alignments for each domain:
== domain 1 score: 16.5 bits; conditional E-value: 4.8e-06
HHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE--GGG--.STTS---EEEE-- CS
UPF0020 44 IEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqadaakLr.lkegevdvivtnp 129
IE al++ ++++++ D+++++v+ eNa+ gv+ ++++ qad+ + lk ++d+i p
tr|A7T8E8|A7T8E8_NEMVE 89 IEFALQVP------------------------QAEVWATDINPAAVDDVAENARLHGVETSVTAIQADVFDCDdLKGMKFDMIFFRP 151
44444444........................4559*********************************999944444999998888 PP
- CS
UPF0020 130 P 130
P
tr|A7T8E8|A7T8E8_NEMVE 152 P 152
8 PP
>> tr|A7RVI7|A7RVI7_NEMVE 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Nematostella vectensis OX=
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 17.1 0.0 3.1e-06 0.0045 65 124 .. 118 180 .. 88 204 .. 0.76
Alignments for each domain:
== domain 1 score: 17.1 bits; conditional E-value: 3.1e-06
HHHHHHHHHH..HH--.EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE--GGG--STTS---E CS
UPF0020 65 lkaeaeeear..aelk.lygsDldrrvvqgareNaekagvgdliefsqadaakLrlkegevdv 124
k++a+++++ + + + D+++ +++ ++++ + ++++ i++++ da++L+ +++++d+
tr|A7RVI7|A7RVI7_NEMVE 118 TKKKAKQKKEteNLSShVTVCDINKYMLRIGKKKGQTLNLKKGISWVAGDAQSLPFADDSFDA 180
344444444432444469999**********************************88889985 PP
>> tr|A7SJF3|A7SJF3_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g245654 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 13.8 0.0 3.2e-05 0.047 74 127 .. 87 139 .. 51 160 .. 0.90
Alignments for each domain:
== domain 1 score: 13.8 bits; conditional E-value: 3.2e-05
HHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE--GGG--STTS---EEEE CS
UPF0020 74 raelklygsDldrrvvqgareNaekagvgdliefsqadaakLrlkegevdvivt 127
++ ++++++l++ + + a + +++g++d++++++ d+ kL+ ++++d +v+
tr|A7SJF3|A7SJF3_NEMVE 87 NTGCHVVALELQEDMHESAIDLTKRCGLSDKVKLQCGDILKLE-HSESYDFLVS 139
45566999***********************************.7779**9997 PP
>> tr|A7SVE2|A7SVE2_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g218063 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.8 0.3 0.00013 0.19 44 125 .. 89 147 .. 58 152 .. 0.75
Alignments for each domain:
== domain 1 score: 11.8 bits; conditional E-value: 0.00013
HHHHHHHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE--GGG--.STTS---EE CS
UPF0020 44 IEaallganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqadaakLr.lkegevdvi 125
IE al++ ++++++ D+++++v+ eNa gv++++++ qad+ + lk ++d+i
tr|A7SVE2|A7SVE2_NEMVE 89 IEFALQVP------------------------QAEVWATDINPAAVEDVAENACLHGVENSVTAIQADVFDCDgLKGMKFDMI 147
44444444........................4559********************************998885444477776 PP
>> tr|A7TBN7|A7TBN7_NEMVE Predicted protein (Fragment) OS=Nematostella vectensis OX=45351 GN=v1g224919 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 12.9 0.0 6.4e-05 0.092 72 131 .. 128 185 .. 103 195 .. 0.87
Alignments for each domain:
== domain 1 score: 12.9 bits; conditional E-value: 6.4e-05
HHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE--GGG--STTS---EEEE---- CS
UPF0020 72 earaelklygsDldrrvvqgareNaekagvgdliefsqadaakLrlkegevdvivtnpPY 131
++r+ +l g+D +++v+ a++N + ++++ +++ + L + + +iv+npPY
tr|A7TBN7|A7TBN7_NEMVE 128 SERPAWRLTGVDRVSEAVALAERNRARLKLSNANFAESHWFSVLV-GH-RFQLIVSNPPY 185
45566779************************9999999999888.55.79********* PP
>> tr|A7SVE3|A7SVE3_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g218064 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.6 0.2 0.00016 0.23 49 125 .. 94 147 .. 59 152 .. 0.79
Alignments for each domain:
== domain 1 score: 11.6 bits; conditional E-value: 0.00016
HHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE--GGG--.STTS---EE CS
UPF0020 49 lganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqadaakLr.lkegevdvi 125
++ +++++++ D+++++v+ eNa gv++++++ qad+ + lk ++d+i
tr|A7SVE3|A7SVE3_NEMVE 94 QV------------------------PQAEVWATDINPAAVEDVAENACLHGVENSVTAIQADVFDCDgLKGMKFDMI 147
33........................45569********************************998885444477776 PP
>> tr|A7SY09|A7SY09_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g248028 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.5 0.2 0.00016 0.24 50 125 .. 95 147 .. 59 152 .. 0.80
Alignments for each domain:
== domain 1 score: 11.5 bits; conditional E-value: 0.00016
HTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE--GGG--.STTS---EE CS
UPF0020 50 ganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqadaakLr.lkegevdvi 125
+ +++++++ D+++++v+ eNa gv++++++ qad+ + lk ++d+i
tr|A7SY09|A7SY09_NEMVE 95 V------------------------PQAEVWATDINPAAVEDVAENACLHGVENSVTAIQADVFDCDgLKGMKFDMI 147
3........................45669********************************998885444477776 PP
>> tr|A7RW11|A7RW11_NEMVE rRNA adenine N(6)-methyltransferase OS=Nematostella vectensis OX=45351 GN=v1g241083 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.4 0.0 0.00018 0.26 75 133 .. 72 128 .. 48 137 .. 0.90
2 ? -2.5 0.0 3.3 4.7e+03 165 194 .. 226 255 .. 220 257 .. 0.80
Alignments for each domain:
== domain 1 score: 11.4 bits; conditional E-value: 0.00018
HH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE--GGG--STTS---EEEE------ CS
UPF0020 75 aelklygsDldrrvvqgareNaekagvgdliefsqadaakLrlkegevdvivtnpPYGe 133
+ k+++ +ld+r+v+ ++ + + ++ + ++ + d+ k l+ +dv v+n+PY +
tr|A7RW11|A7RW11_NEMVE 72 QSKKVIACELDPRMVAELQKRVQGTPLQSKLSVMVGDVLKTDLPF--FDVCVANLPYQI 128
556699********************************9888666..9*********76 PP
== domain 2 score: -2.5 bits; conditional E-value: 3.3
EEESSHHHHHCC---ESEEEEEEETTEEEE CS
UPF0020 165 ltsenkalekaleeralrkvkeknvklgll 194
+ +nk+l +++++r + +v ekn k+ +
tr|A7RW11|A7RW11_NEMVE 226 FVRKNKTLSACFNSRPVLEVLEKNYKIHCS 255
567889999999999999999999988886 PP
>> tr|A7SY10|A7SY10_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g219300 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 10.7 0.3 0.00029 0.41 49 125 .. 94 147 .. 59 152 .. 0.78
Alignments for each domain:
== domain 1 score: 10.7 bits; conditional E-value: 0.00029
HHTT--TTTT----SSHHHHHHHHHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE--GGG--.STTS---EE CS
UPF0020 49 lganiapgllrefvlelkaeaeeearaelklygsDldrrvvqgareNaekagvgdliefsqadaakLr.lkegevdvi 125
++ +++++++ D+++++v+ eNa gv++++++ qad+ + lk ++d+i
tr|A7SY10|A7SY10_NEMVE 94 QV------------------------PQAEVWATDINPAAVEDVAENACLHGVANSVTAIQADVFDCDgLKGMKFDMI 147
33........................45569********************************998885444477776 PP
>> tr|A7RHA8|A7RHA8_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g197133 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.9 0.0 0.00013 0.18 74 130 .. 94 151 .. 64 153 .. 0.84
Alignments for each domain:
== domain 1 score: 11.9 bits; conditional E-value: 0.00013
HHH--EEEEES-HHHHHHHHHHHHHTT-GGGEEEEE--GGG--.STTS---EEEE--- CS
UPF0020 74 raelklygsDldrrvvqgareNaekagvgdliefsqadaakLr.lkegevdvivtnpP 130
++ ++++ D ++++v+ + eNa+ gv++++ + d+ k + l+ + +d+i P
tr|A7RHA8|A7RHA8_NEMVE 94 SKKCQVWATDVNPSAVKNTAENAKLHGVDNQVRTATGDVFKAPgLAGKTFDIIFWSHP 151
36778**********************************9999766668888866655 PP
>> tr|A7SJ10|A7SJ10_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g120055 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.5 0.0 0.00016 0.23 72 105 .. 62 94 .. 27 111 .. 0.72
Alignments for each domain:
== domain 1 score: 11.5 bits; conditional E-value: 0.00016
HHHHH--EEEEES-HHHHHHHHHHHHHTT-GGGE CS
UPF0020 72 earaelklygsDldrrvvqgareNaekagvgdli 105
++ + ++gsD+d+++++ a++N +++ v++ i
tr|A7SJ10|A7SJ10_NEMVE 62 KNYEPRVIVGSDIDNSLIRIAKSNIRNY-VEKPI 94
33344459******************98.44444 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (197 nodes)
Target sequences: 24428 (8257945 residues searched)
Passed MSV filter: 632 (0.025872); expected 488.6 (0.02)
Passed bias filter: 516 (0.0211233); expected 488.6 (0.02)
Passed Vit filter: 59 (0.00241526); expected 24.4 (0.001)
Passed Fwd filter: 17 (0.000695923); expected 0.2 (1e-05)
Initial search space (Z): 24428 [actual number of targets]
Domain search space (domZ): 17 [number of targets reported over threshold]
# CPU time: 0.17u 0.01s 00:00:00.18 Elapsed: 00:00:00.07
# Mc/sec: 23240.22
//
[ok]