# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/WBS_methylT.hmm.txt
# target sequence database: proteomes/Strongylocentrotus_purpuratus.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: WBS_methylT [M=82]
Accession: PF12589.7
Description: Methyltransferase involved in Williams-Beuren syndrome
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.4e-18 66.5 6.9 7.1e-18 65.8 6.9 1.3 1 tr|W4Z511|W4Z511_STRPU Uncharacterized protein OS=Strongyloc
------ inclusion threshold ------
1.6 10.2 3.8 0.75 11.2 0.2 2.3 2 tr|W4XD29|W4XD29_STRPU Uncharacterized protein OS=Strongyloc
Domain annotation for each sequence (and alignments):
>> tr|W4Z511|W4Z511_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 65.8 6.9 5e-22 7.1e-18 1 81 [. 203 279 .. 203 280 .. 0.86
Alignments for each domain:
== domain 1 score: 65.8 bits; conditional E-value: 5e-22
WBS_methylT 1 LfaGkseqqqlpkglgedgeeeseeaeqvkyekrrrkrkkrkkkkkkavksreWilkKKerrrkkGk.eVkrdSKYTGRkRk 81
LfaG ++ +lpk+lg+ ++ +q ++++ r + ++ k+k + +ksreWi +KKerrr++Gk eV++dSKYTGRkR
tr|W4Z511|W4Z511_STRPU 203 LFAG-VSNPTLPKALGTGNQRGVA--TQASFTDSRMRYRNMKGK--SVKKSREWIKEKKERRRRQGKgEVRPDSKYTGRKRS 279
8999.89999*******9976655..888888888877755555..4568*******************************6 PP
>> tr|W4XD29|W4XD29_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.2 0.2 5.2e-05 0.75 37 71 .. 303 337 .. 275 339 .. 0.62
2 ? -2.4 0.3 0.92 1.3e+04 18 41 .. 353 378 .. 345 384 .. 0.56
Alignments for each domain:
== domain 1 score: 11.2 bits; conditional E-value: 5.2e-05
WBS_methylT 37 krkkrkkkkkkavk.....sreWilkKKerrrkkGkeVkr 71
+ + ++ + sr+W +++Ke+ +++G ++k+
tr|W4XD29|W4XD29_STRPU 303 RGQGDGGD-----TegkpdSRDWSFAQKELLKHQGIDIKE 337
22222222.....123356****************99986 PP
== domain 2 score: -2.4 bits; conditional E-value: 0.92
WBS_methylT 18 dgeeese..eaeqvkyekrrrkrkkr 41
++ee ++ e+++ +ye++ + +k+
tr|W4XD29|W4XD29_STRPU 353 EKEEVDQllEQQRLDYESKLQALQKQ 378
22233335677777777776655554 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (82 nodes)
Target sequences: 28594 (14266044 residues searched)
Passed MSV filter: 3043 (0.106421); expected 571.9 (0.02)
Passed bias filter: 836 (0.0292369); expected 571.9 (0.02)
Passed Vit filter: 131 (0.00458138); expected 28.6 (0.001)
Passed Fwd filter: 11 (0.000384696); expected 0.3 (1e-05)
Initial search space (Z): 28594 [actual number of targets]
Domain search space (domZ): 2 [number of targets reported over threshold]
# CPU time: 0.28u 0.01s 00:00:00.29 Elapsed: 00:00:00.10
# Mc/sec: 11698.16
//
[ok]