# hmmsearch :: search profile(s) against a sequence database # HMMER 3.1b2 (February 2015); http://hmmer.org/ # Copyright (C) 2015 Howard Hughes Medical Institute. # Freely distributed under the GNU General Public License (GPLv3). # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query HMM file: pfam_list/WBS_methylT.hmm.txt # target sequence database: proteomes/Tetrahymena_thermophila.fasta # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: WBS_methylT [M=82] Accession: PF12589.7 Description: Methyltransferase involved in Williams-Beuren syndrome Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.2e-15 57.8 8.0 3.9e-15 56.9 8.0 1.4 1 tr|I7M2L9|I7M2L9_TETTS Methyltransferase OS=Tetrahymena ther Domain annotation for each sequence (and alignments): >> tr|I7M2L9|I7M2L9_TETTS Methyltransferase OS=Tetrahymena thermophila (strain SB210) OX=312017 GN=TTHERM_00305590 PE=4 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 56.9 8.0 1.5e-19 3.9e-15 13 81 .. 216 277 .. 201 278 .. 0.70 Alignments for each domain: == domain 1 score: 56.9 bits; conditional E-value: 1.5e-19 WBS_methylT 13 kglgedgeeeseeaeqvkyekrrrkrkkrkkkkkkavksreWilkKKerrrkkGkeVkrdSKYTGRkRk 81 +gl++++ +e+ k++ ++++++ +k kk + ks+eWi +KKer+r +G+eV++dSKYTGRkR tr|I7M2L9|I7M2L9_TETTS 216 NGLEDEN------EEEAKFNAAQKQKQI-HKAKKPKIKSKEWIQNKKERQRAQGREVRPDSKYTGRKRS 277 4443333......344556655555554.444555577******************************6 PP Internal pipeline statistics summary: ------------------------------------- Query model(s): 1 (82 nodes) Target sequences: 26971 (16912921 residues searched) Passed MSV filter: 7288 (0.270216); expected 539.4 (0.02) Passed bias filter: 1976 (0.0732639); expected 539.4 (0.02) Passed Vit filter: 255 (0.0094546); expected 27.0 (0.001) Passed Fwd filter: 63 (0.00233584); expected 0.3 (1e-05) Initial search space (Z): 26971 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 1.20u 0.03s 00:00:01.23 Elapsed: 00:00:00.37 # Mc/sec: 3748.27 // [ok]