# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/WBS_methylT.hmm.txt
# target sequence database: proteomes/Trichomonas_vaginalis.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: WBS_methylT [M=82]
Accession: PF12589.7
Description: Methyltransferase involved in Williams-Beuren syndrome
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.7e-12 49.3 3.6 2.7e-12 48.7 3.6 1.3 1 tr|A2DHB5|A2DHB5_TRIVA Uncharacterized protein OS=Trichomona
------ inclusion threshold ------
0.11 14.7 0.7 0.19 14.0 0.7 1.3 1 tr|A2F0D0|A2F0D0_TRIVA Peptidylprolyl isomerase OS=Trichomon
3.1 10.1 6.2 1.1e+02 5.1 0.1 3.3 2 tr|A2GTU7|A2GTU7_TRIVA Uncharacterized protein (Fragment) OS
7.2 8.9 6.7 56 6.0 1.4 2.8 2 tr|A2HJT6|A2HJT6_TRIVA Uncharacterized protein (Fragment) OS
Domain annotation for each sequence (and alignments):
>> tr|A2DHB5|A2DHB5_TRIVA Uncharacterized protein OS=Trichomonas vaginalis OX=5722 GN=TVAG_021330 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 48.7 3.6 2.2e-16 2.7e-12 29 81 .. 222 274 .. 205 275 .. 0.75
Alignments for each domain:
== domain 1 score: 48.7 bits; conditional E-value: 2.2e-16
WBS_methylT 29 vkyekrrrkrkkrkkkkkkavksreWilkKKerrrkkGkeVkrdSKYTGRkRk 81
v + + + + +++kk +++eWi+kKKer+r Gk+V +dSKYTGR R+
tr|A2DHB5|A2DHB5_TRIVA 222 VGCPTVGTFKAGNDHHQKKGFNKKEWIIKKKERQRMLGKKVANDSKYTGRSRR 274
44444444445555555666669****************************98 PP
>> tr|A2F0D0|A2F0D0_TRIVA Peptidylprolyl isomerase OS=Trichomonas vaginalis OX=5722 GN=TVAG_292580 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 14.0 0.7 1.5e-05 0.19 15 71 .. 39 104 .. 35 109 .. 0.80
Alignments for each domain:
== domain 1 score: 14.0 bits; conditional E-value: 1.5e-05
WBS_methylT 15 lgedgeeeseeaeqvkyekrrrkrkkr.....kkkkkkavk....sreWilkKKerrrkkGkeVkr 71
lg+d+++ ++++++++ ++r+r+++k+ k ++ k +k +++ i++ K ++ kkG++V+
tr|A2F0D0|A2F0D0_TRIVA 39 LGGDNSQAANRRKTIEDQRRARQETKSslppaKPGAVKVTKdgkvTKDIITEGKGQQAKKGDHVRV 104
677888888899999999999998888786655555555559999******************985 PP
>> tr|A2GTU7|A2GTU7_TRIVA Uncharacterized protein (Fragment) OS=Trichomonas vaginalis OX=5722 GN=TVAG_509170 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 4.6 2.5 0.013 1.6e+02 24 57 .. 44 86 .. 19 95 .. 0.77
2 ? 5.1 0.1 0.0085 1.1e+02 23 60 .. 291 330 .. 273 334 .. 0.70
Alignments for each domain:
== domain 1 score: 4.6 bits; conditional E-value: 0.013
WBS_methylT 24 e.........eaeqvkyekrrrkrkkrkkkkkkavksreWilk 57
+ ++++v+ye+ ++++k++ +ka ks e+i +
tr|A2GTU7|A2GTU7_TRIVA 44 NvkaekllqlQNQTVQYENLAQESKNNDAAMQKAMKSAEYIKA 86
033345666789***************9999999998888865 PP
== domain 2 score: 5.1 bits; conditional E-value: 0.0085
WBS_methylT 23 se..eaeqvkyekrrrkrkkrkkkkkkavksreWilkKKe 60
++ ++ +v+++ ++++++++ +k+++++ ++e++ Ke
tr|A2GTU7|A2GTU7_TRIVA 291 QNtaQQPTVQNTAQQQPQTEQGHKRSREQGNQEFLKMLKE 330
22337899**********9996666556668888877666 PP
>> tr|A2HJT6|A2HJT6_TRIVA Uncharacterized protein (Fragment) OS=Trichomonas vaginalis OX=5722 GN=TVAG_606040 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 6.0 1.4 0.0045 56 24 57 .. 17 55 .. 3 65 .. 0.77
2 ? 4.9 0.3 0.01 1.3e+02 24 61 .. 278 318 .. 245 321 .. 0.72
Alignments for each domain:
== domain 1 score: 6.0 bits; conditional E-value: 0.0045
WBS_methylT 24 e.....eaeqvkyekrrrkrkkrkkkkkkavksreWilk 57
e ++++v+ye+ ++++k++ +ka ks e+i +
tr|A2HJT6|A2HJT6_TRIVA 17 EkllqlQNQTVQYENLAQESKNNDAAMQKAMKSAEYIKA 55
13455689***************9999999998888865 PP
== domain 2 score: 4.9 bits; conditional E-value: 0.01
WBS_methylT 24 e...eaeqvkyekrrrkrkkrkkkkkkavksreWilkKKer 61
+ + +v+++ ++++++++ +k+++++ ++e++ Ke
tr|A2HJT6|A2HJT6_TRIVA 278 QntaPQPTVQNTAQQQPQTEQGHKRSREQGNQEFLKMLKEN 318
13346899********9999966666566689988777775 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (82 nodes)
Target sequences: 50190 (17055200 residues searched)
Passed MSV filter: 6433 (0.128173); expected 1003.8 (0.02)
Passed bias filter: 2069 (0.0412234); expected 1003.8 (0.02)
Passed Vit filter: 242 (0.00482168); expected 50.2 (0.001)
Passed Fwd filter: 51 (0.00101614); expected 0.5 (1e-05)
Initial search space (Z): 50190 [actual number of targets]
Domain search space (domZ): 4 [number of targets reported over threshold]
# CPU time: 0.62u 0.02s 00:00:00.64 Elapsed: 00:00:00.19
# Mc/sec: 7360.67
//
[ok]