# hmmsearch :: search profile(s) against a sequence database # HMMER 3.1b2 (February 2015); http://hmmer.org/ # Copyright (C) 2015 Howard Hughes Medical Institute. # Freely distributed under the GNU General Public License (GPLv3). # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query HMM file: pfam_list/WD40.hmm.txt # target sequence database: proteomes/Branchiostoma_floridae.fasta # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: WD40 [M=38] Accession: PF00400.32 Description: WD domain, G-beta repeat Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.1e-72 238.7 80.5 1.3e-08 36.0 0.2 19.9 17 tr|C3Z4J5|C3Z4J5_BRAFL Uncharacterized protein OS=Branchiost 2.5e-72 237.6 66.3 3.7e-07 31.4 0.5 18.4 15 tr|C3Y5Y4|C3Y5Y4_BRAFL Uncharacterized protein OS=Branchiost 3.5e-70 230.8 49.8 9.1e-07 30.1 1.3 13.5 12 tr|C3YZV6|C3YZV6_BRAFL Uncharacterized protein OS=Branchiost 1.3e-68 225.8 56.7 1e-05 26.8 0.2 19.1 14 tr|C3ZAU7|C3ZAU7_BRAFL Uncharacterized protein OS=Branchiost 1.2e-64 213.3 22.0 1.1e-09 39.4 1.8 7.9 7 sp|C3XVT5|LIS1_BRAFL Lissencephaly-1 homolog OS=Branchiost 4e-64 211.7 52.6 0.00029 22.2 0.0 21.3 19 tr|C3ZDR4|C3ZDR4_BRAFL Uncharacterized protein (Fragment) OS 5.8e-64 211.1 14.5 1.6e-09 38.9 0.1 7.2 7 tr|C3YV64|C3YV64_BRAFL Uncharacterized protein (Fragment) OS 1.6e-62 206.6 15.0 2.6e-08 35.0 0.1 8.2 8 tr|C3ZS55|C3ZS55_BRAFL Uncharacterized protein OS=Branchiost 1.8e-62 206.4 20.1 8.7e-10 39.7 0.2 7.2 7 tr|Q8T776|Q8T776_BRAFL Uncharacterized protein OS=Branchiost 1.4e-60 200.4 82.6 2.1e-05 25.8 0.6 25.5 21 tr|C3XR37|C3XR37_BRAFL Uncharacterized protein OS=Branchiost 3.1e-58 193.0 26.1 6.9e-09 36.8 0.1 10.9 10 tr|C3XTK6|C3XTK6_BRAFL Uncharacterized protein OS=Branchiost 3.5e-57 189.7 22.5 3.9e-08 34.5 0.0 11.0 9 tr|C3ZAD4|C3ZAD4_BRAFL Uncharacterized protein OS=Branchiost 4.2e-57 189.4 46.7 1.3e-07 32.9 0.2 13.3 11 tr|C3XZW3|C3XZW3_BRAFL Uncharacterized protein OS=Branchiost 7e-56 185.6 12.2 1.2e-11 45.6 0.1 6.6 6 tr|C3ZDV4|C3ZDV4_BRAFL Uncharacterized protein OS=Branchiost 7.3e-56 185.5 24.4 2.8e-10 41.3 0.2 8.4 8 tr|C3ZEP1|C3ZEP1_BRAFL Uncharacterized protein OS=Branchiost 3.9e-55 183.2 23.7 7.6e-08 33.5 0.0 11.5 9 tr|C3ZAE1|C3ZAE1_BRAFL Uncharacterized protein OS=Branchiost 1.2e-51 172.1 9.8 5.2e-08 34.1 0.0 7.7 7 tr|C3ZNQ2|C3ZNQ2_BRAFL Uncharacterized protein OS=Branchiost 2.7e-51 171.1 28.1 7.6e-10 39.9 0.1 7.1 7 tr|C3YIV0|C3YIV0_BRAFL Probable cytosolic iron-sulfur protei 4.4e-51 170.4 9.7 5.2e-11 43.5 0.2 7.0 6 tr|C3YLC5|C3YLC5_BRAFL Katanin p80 WD40 repeat-containing su 1.5e-50 168.7 8.6 3.8e-08 34.5 0.1 7.1 7 tr|C3Y8A7|C3Y8A7_BRAFL Uncharacterized protein OS=Branchiost 4.8e-50 167.1 30.7 1.7e-07 32.4 0.3 7.7 7 tr|C3XW77|C3XW77_BRAFL Uncharacterized protein OS=Branchiost 8.7e-50 166.3 20.7 4.2e-09 37.5 0.2 7.4 6 tr|C3ZSP8|C3ZSP8_BRAFL Uncharacterized protein OS=Branchiost 2.1e-48 161.9 27.8 2.3e-08 35.2 0.1 7.1 7 tr|C3XQF5|C3XQF5_BRAFL Uncharacterized protein OS=Branchiost 4.1e-46 154.7 37.2 2.7e-09 38.1 1.2 7.2 7 tr|C3YG76|C3YG76_BRAFL Uncharacterized protein OS=Branchiost 3.1e-44 148.7 23.9 5.8e-07 30.7 0.2 6.3 6 tr|C3ZI02|C3ZI02_BRAFL Uncharacterized protein OS=Branchiost 9.5e-44 147.2 23.4 9.2e-06 26.9 0.2 7.6 7 tr|C3ZN01|C3ZN01_BRAFL Uncharacterized protein OS=Branchiost 2.5e-43 145.9 55.9 0.0009 20.7 0.8 18.8 13 tr|C3ZDG0|C3ZDG0_BRAFL Uncharacterized protein (Fragment) OS 3.1e-43 145.5 52.5 0.0012 20.3 0.7 18.6 14 tr|C3ZYS2|C3ZYS2_BRAFL Uncharacterized protein OS=Branchiost 2.1e-42 142.9 20.1 7.7e-08 33.5 0.0 7.2 7 tr|C3ZSF0|C3ZSF0_BRAFL Uncharacterized protein OS=Branchiost 5.6e-42 141.6 21.6 5.9e-06 27.6 0.1 12.0 11 tr|C3YCA1|C3YCA1_BRAFL Uncharacterized protein OS=Branchiost 1.7e-41 140.0 8.3 2.1e-09 38.5 0.1 7.7 7 tr|C3YRJ2|C3YRJ2_BRAFL Coatomer subunit beta' OS=Branchiosto 2.2e-41 139.7 26.1 2.2e-07 32.1 0.1 7.5 7 tr|C3YKY8|C3YKY8_BRAFL Uncharacterized protein (Fragment) OS 4.8e-41 138.6 35.3 3e-08 34.8 0.6 11.1 10 tr|C3YCB2|C3YCB2_BRAFL Uncharacterized protein OS=Branchiost 6.6e-41 138.2 23.0 0.0024 19.3 0.0 12.5 12 tr|C3XR73|C3XR73_BRAFL Uncharacterized protein (Fragment) OS 1.5e-40 137.0 42.7 5.9e-07 30.7 0.8 8.6 7 tr|C3ZAF5|C3ZAF5_BRAFL Uncharacterized protein OS=Branchiost 1.3e-38 130.9 12.9 1.2e-07 32.9 0.2 6.2 5 tr|C3XR19|C3XR19_BRAFL Uncharacterized protein (Fragment) OS 1.6e-38 130.6 22.0 1.7e-08 35.6 2.5 7.2 7 tr|C3YZV2|C3YZV2_BRAFL Uncharacterized protein OS=Branchiost 2.4e-38 130.1 14.6 6.3e-08 33.8 0.7 7.3 7 tr|C3YG00|C3YG00_BRAFL Uncharacterized protein (Fragment) OS 3.3e-38 129.6 12.4 2.9e-08 34.9 0.0 7.1 7 tr|C3ZFQ7|C3ZFQ7_BRAFL Uncharacterized protein OS=Branchiost 3.4e-38 129.6 14.2 7.8e-06 27.2 0.0 8.4 7 tr|C3Y9Y1|C3Y9Y1_BRAFL Uncharacterized protein OS=Branchiost 7.2e-38 128.6 25.6 9.9e-09 36.3 0.3 7.2 7 tr|C3YQA4|C3YQA4_BRAFL Uncharacterized protein OS=Branchiost 3.1e-37 126.5 31.6 2.8e-06 28.6 0.0 11.0 8 tr|C3YEK2|C3YEK2_BRAFL Uncharacterized protein OS=Branchiost 8.4e-37 125.2 9.9 1.9e-07 32.3 0.4 6.4 6 tr|C3ZR05|C3ZR05_BRAFL Uncharacterized protein OS=Branchiost 1.8e-36 124.2 22.7 1.9e-07 32.3 0.3 8.4 8 tr|C3YEQ5|C3YEQ5_BRAFL Uncharacterized protein OS=Branchiost 7.4e-36 122.2 24.1 4.6e-08 34.2 3.0 6.1 6 tr|C3Z4E3|C3Z4E3_BRAFL Uncharacterized protein OS=Branchiost 1.5e-35 121.3 7.4 1.9e-07 32.3 0.0 6.0 5 tr|C3Z0K8|C3Z0K8_BRAFL Uncharacterized protein OS=Branchiost 2.4e-35 120.5 15.9 2.2e-06 28.9 0.0 7.7 7 tr|C3ZNT1|C3ZNT1_BRAFL Uncharacterized protein OS=Branchiost 4.8e-35 119.6 18.2 3.8e-06 28.2 0.3 7.3 7 tr|C3Z2P5|C3Z2P5_BRAFL Uncharacterized protein (Fragment) OS 5e-35 119.6 16.9 2e-06 29.0 0.2 7.9 7 tr|C3ZEY1|C3ZEY1_BRAFL Uncharacterized protein OS=Branchiost 7.7e-35 119.0 9.8 2.6e-06 28.7 0.8 9.6 9 tr|C3YJ60|C3YJ60_BRAFL Uncharacterized protein OS=Branchiost 5.6e-34 116.3 17.7 1.2e-06 29.8 0.0 7.4 7 tr|C3YRI5|C3YRI5_BRAFL Uncharacterized protein OS=Branchiost 8.4e-34 115.7 2.9 9.7e-10 39.5 0.0 6.5 5 tr|C3Y795|C3Y795_BRAFL Uncharacterized protein OS=Branchiost 1.4e-33 115.0 3.7 4.6e-07 31.1 0.0 7.2 6 tr|C3YVN0|C3YVN0_BRAFL Uncharacterized protein OS=Branchiost 2.7e-33 114.1 2.9 7.7e-05 24.0 0.0 6.5 6 tr|C3ZY33|C3ZY33_BRAFL Uncharacterized protein OS=Branchiost 2.8e-33 114.0 7.6 5.4e-08 34.0 0.0 7.8 7 tr|C3XWD4|C3XWD4_BRAFL Coronin OS=Branchiostoma floridae OX= 5.2e-33 113.2 7.5 7.2e-07 30.4 0.0 6.3 6 tr|C3ZKU5|C3ZKU5_BRAFL Uncharacterized protein OS=Branchiost 2.7e-32 110.9 32.7 3.4e-07 31.5 0.4 9.4 7 tr|C3XW75|C3XW75_BRAFL Uncharacterized protein OS=Branchiost 3.7e-32 110.5 32.6 0.0025 19.2 0.0 13.0 12 tr|C3ZDE2|C3ZDE2_BRAFL Uncharacterized protein OS=Branchiost 5.6e-32 109.9 26.8 9.9e-07 30.0 0.7 8.2 8 tr|C3Z098|C3Z098_BRAFL Uncharacterized protein OS=Branchiost 6e-32 109.8 11.5 9.8e-06 26.9 0.1 7.2 6 tr|C3ZTF5|C3ZTF5_BRAFL Uncharacterized protein OS=Branchiost 9.3e-32 109.2 26.5 6.9e-07 30.5 0.2 7.5 6 tr|C3Z5L8|C3Z5L8_BRAFL Ribosome biogenesis protein WDR12 hom 1.3e-31 108.8 26.1 0.00044 21.6 0.2 12.0 10 tr|C3XZE2|C3XZE2_BRAFL Uncharacterized protein OS=Branchiost 3.4e-31 107.4 25.3 2.9e-06 28.6 0.5 7.5 7 tr|C3XSK3|C3XSK3_BRAFL Uncharacterized protein OS=Branchiost 5.4e-31 106.8 23.0 4e-05 24.9 1.2 9.4 7 tr|C3Z3X1|C3Z3X1_BRAFL Uncharacterized protein OS=Branchiost 5.5e-31 106.8 14.7 5.8e-06 27.6 0.1 6.1 6 tr|C3ZMP1|C3ZMP1_BRAFL Uncharacterized protein (Fragment) OS 7.9e-31 106.3 25.6 1.9e-08 35.5 1.2 7.9 7 tr|C3YY58|C3YY58_BRAFL Uncharacterized protein OS=Branchiost 2.5e-29 101.5 10.2 3.6e-05 25.1 0.1 7.8 6 tr|C3YKN6|C3YKN6_BRAFL Uncharacterized protein OS=Branchiost 4.6e-29 100.7 11.7 4e-06 28.1 0.0 5.2 5 tr|C3Y3Z8|C3Y3Z8_BRAFL Beta-transducin repeat containing pro 1.2e-28 99.3 16.3 2.1e-06 29.0 0.4 6.2 6 tr|C3Z2P6|C3Z2P6_BRAFL Uncharacterized protein (Fragment) OS 2.7e-28 98.3 18.7 2.1e-08 35.3 0.3 5.3 5 tr|C3YQ92|C3YQ92_BRAFL Uncharacterized protein OS=Branchiost 5.9e-28 97.2 19.3 0.00045 21.6 0.1 9.7 8 tr|C3YYY1|C3YYY1_BRAFL Uncharacterized protein OS=Branchiost 1.1e-27 96.3 12.5 1.6e-06 29.3 0.1 5.6 5 tr|C3XY57|C3XY57_BRAFL Uncharacterized protein OS=Branchiost 1.3e-27 96.1 19.9 1.4e-09 39.1 1.2 4.9 4 tr|C3XTS9|C3XTS9_BRAFL Uncharacterized protein OS=Branchiost 1.9e-27 95.6 24.1 2e-07 32.2 0.0 10.6 7 tr|C3YZ97|C3YZ97_BRAFL Uncharacterized protein OS=Branchiost 5.2e-27 94.2 10.3 7.4e-06 27.2 0.6 6.9 6 tr|C3Z032|C3Z032_BRAFL Uncharacterized protein OS=Branchiost 5.8e-27 94.1 9.7 2.6e-09 38.2 0.1 3.7 3 tr|C3XVR2|C3XVR2_BRAFL Uncharacterized protein OS=Branchiost 6.2e-27 94.0 8.1 1.3e-05 26.4 0.0 7.0 6 tr|C3Z4X0|C3Z4X0_BRAFL Uncharacterized protein OS=Branchiost 9.6e-27 93.4 3.8 1.4e-07 32.7 0.0 6.3 6 tr|C3XVA7|C3XVA7_BRAFL Uncharacterized protein OS=Branchiost 1.2e-26 93.1 1.7 1.1e-07 33.1 0.1 7.2 6 tr|C3ZBQ5|C3ZBQ5_BRAFL Ribosome biogenesis protein BOP1 homo 1.2e-26 93.1 2.5 0.0001 23.7 0.0 7.2 6 tr|C3YXJ5|C3YXJ5_BRAFL Uncharacterized protein OS=Branchiost 1.2e-26 93.1 16.2 5e-06 27.8 0.1 7.1 6 tr|C3Y441|C3Y441_BRAFL Uncharacterized protein OS=Branchiost 1.8e-26 92.5 14.3 3.3e-07 31.5 0.0 5.6 5 tr|C4A021|C4A021_BRAFL Uncharacterized protein OS=Branchiost 1.8e-26 92.5 40.2 0.11 14.0 1.4 14.1 11 tr|C3Z6R8|C3Z6R8_BRAFL Uncharacterized protein OS=Branchiost 3.1e-26 91.7 12.4 1.7e-07 32.4 0.3 6.1 6 tr|C3ZJ75|C3ZJ75_BRAFL Uncharacterized protein OS=Branchiost 1.8e-25 89.3 2.9 0.00097 20.5 0.1 6.1 6 tr|C3Z7M9|C3Z7M9_BRAFL Uncharacterized protein OS=Branchiost 5.9e-25 87.7 14.1 0.00011 23.6 0.0 7.3 7 tr|C3XUD8|C3XUD8_BRAFL Uncharacterized protein (Fragment) OS 6.6e-25 87.5 11.3 9.1e-07 30.1 0.0 5.3 5 tr|C3Y4Q5|C3Y4Q5_BRAFL Uncharacterized protein (Fragment) OS 1.1e-24 86.8 7.4 5.2e-08 34.1 0.2 6.5 5 tr|C3ZF43|C3ZF43_BRAFL Uncharacterized protein OS=Branchiost 2e-24 86.0 38.1 0.00046 21.6 0.4 10.9 8 tr|C3YYY3|C3YYY3_BRAFL Uncharacterized protein OS=Branchiost 2e-24 86.0 13.1 9.7e-07 30.1 0.1 7.5 6 tr|C3Z5W3|C3Z5W3_BRAFL Uncharacterized protein (Fragment) OS 2.8e-24 85.6 14.3 2e-06 29.0 0.1 7.5 7 tr|C3Z9A3|C3Z9A3_BRAFL Uncharacterized protein OS=Branchiost 3e-24 85.5 4.6 1.5e-07 32.6 0.0 4.0 4 tr|C3YPF3|C3YPF3_BRAFL Uncharacterized protein (Fragment) OS 5.9e-24 84.5 10.8 5.6e-05 24.5 0.4 6.5 6 tr|C3ZEH8|C3ZEH8_BRAFL Uncharacterized protein (Fragment) OS 6.8e-24 84.3 6.4 0.00014 23.2 0.2 7.7 7 tr|C3YPH4|C3YPH4_BRAFL Uncharacterized protein OS=Branchiost 7.6e-24 84.2 17.2 2.8e-08 34.9 0.1 5.8 5 tr|C3Z6S5|C3Z6S5_BRAFL Uncharacterized protein OS=Branchiost 8.5e-24 84.0 7.9 0.00093 20.6 0.3 7.2 5 tr|C3YT95|C3YT95_BRAFL Uncharacterized protein OS=Branchiost 3.5e-23 82.1 16.4 3.6e-05 25.1 0.0 9.3 6 tr|C3YRV0|C3YRV0_BRAFL Uncharacterized protein (Fragment) OS 4.4e-23 81.8 14.4 1.2e-08 36.0 0.1 10.1 6 tr|C3YZV9|C3YZV9_BRAFL Uncharacterized protein OS=Branchiost 6.4e-23 81.2 9.9 0.00036 21.9 0.0 8.2 7 tr|C3ZML4|C3ZML4_BRAFL Uncharacterized protein (Fragment) OS 1.3e-22 80.2 1.0 2.5e-09 38.2 0.3 3.5 3 tr|C3XVR3|C3XVR3_BRAFL Uncharacterized protein OS=Branchiost 1.4e-22 80.2 1.0 2.5e-09 38.2 0.3 3.4 3 tr|C3XVS4|C3XVS4_BRAFL Uncharacterized protein OS=Branchiost 3e-22 79.1 7.1 0.017 16.6 0.0 7.2 6 tr|C3XUL0|C3XUL0_BRAFL Uncharacterized protein (Fragment) OS 3.8e-22 78.8 6.9 0.0051 18.3 0.0 7.7 6 tr|C3ZF60|C3ZF60_BRAFL Uncharacterized protein OS=Branchiost 4.7e-22 78.5 20.2 0.00094 20.6 0.0 7.0 6 tr|C3YVL3|C3YVL3_BRAFL Uncharacterized protein OS=Branchiost 7.4e-22 77.9 14.8 0.034 15.7 0.2 10.9 7 tr|C3ZLM0|C3ZLM0_BRAFL Uncharacterized protein OS=Branchiost 9.5e-22 77.5 2.8 9.6e-08 33.2 0.0 3.1 3 tr|C3YID2|C3YID2_BRAFL Uncharacterized protein OS=Branchiost 1.5e-21 76.9 17.9 3.6e-06 28.2 1.1 6.8 6 tr|C3Z7P8|C3Z7P8_BRAFL Uncharacterized protein OS=Branchiost 5.4e-21 75.2 8.0 4.9e-05 24.6 0.0 5.8 5 tr|C3XZ79|C3XZ79_BRAFL Uncharacterized protein OS=Branchiost 6.9e-21 74.8 24.0 0.00044 21.6 0.1 7.0 6 tr|C3ZYW3|C3ZYW3_BRAFL Uncharacterized protein OS=Branchiost 7.9e-21 74.6 1.4 0.0028 19.1 0.1 6.6 6 tr|C3YZW3|C3YZW3_BRAFL Uncharacterized protein OS=Branchiost 1.4e-20 73.8 24.0 0.00044 21.6 0.1 6.9 5 tr|C3YH46|C3YH46_BRAFL Uncharacterized protein OS=Branchiost 1.4e-20 73.8 11.8 0.00024 22.5 0.0 9.2 6 tr|C3ZR20|C3ZR20_BRAFL Uncharacterized protein OS=Branchiost 4.4e-20 72.3 14.3 0.00012 23.4 0.2 6.4 5 tr|C3Y089|C3Y089_BRAFL Uncharacterized protein OS=Branchiost 8.6e-20 71.4 5.4 4e-05 24.9 0.0 6.0 4 tr|C3YYJ5|C3YYJ5_BRAFL Uncharacterized protein OS=Branchiost 8.7e-20 71.3 9.0 7.5e-06 27.2 0.2 6.1 5 tr|C3Y5S4|C3Y5S4_BRAFL Uncharacterized protein OS=Branchiost 2.6e-19 69.8 10.1 0.0058 18.1 0.1 7.1 5 tr|C3Y7A1|C3Y7A1_BRAFL Uncharacterized protein OS=Branchiost 3.2e-19 69.5 7.7 0.0073 17.8 0.1 7.8 7 tr|C3XRY5|C3XRY5_BRAFL Uncharacterized protein OS=Branchiost 3.8e-19 69.3 8.7 2.7e-09 38.1 0.0 3.7 3 tr|C3Z455|C3Z455_BRAFL Uncharacterized protein OS=Branchiost 5.3e-19 68.9 20.4 1.3e-06 29.6 0.4 6.4 4 tr|C3ZIF8|C3ZIF8_BRAFL Uncharacterized protein OS=Branchiost 5.7e-19 68.8 11.3 2.2e-07 32.1 0.5 6.6 4 tr|C3YQL5|C3YQL5_BRAFL Uncharacterized protein OS=Branchiost 7.8e-19 68.3 22.5 0.00014 23.2 0.0 8.0 6 tr|C3YJD8|C3YJD8_BRAFL Uncharacterized protein OS=Branchiost 9.1e-19 68.1 8.3 0.00011 23.5 0.0 6.6 4 tr|C3YX31|C3YX31_BRAFL Uncharacterized protein OS=Branchiost 1.3e-18 67.6 7.2 8e-06 27.1 0.6 5.1 4 tr|C3XW19|C3XW19_BRAFL Uncharacterized protein (Fragment) OS 3.5e-18 66.3 10.3 0.00044 21.6 0.1 6.5 5 tr|C3ZMT3|C3ZMT3_BRAFL Uncharacterized protein OS=Branchiost 4.1e-18 66.0 4.6 0.00018 22.9 0.1 4.6 4 tr|C3ZSA7|C3ZSA7_BRAFL Uncharacterized protein OS=Branchiost 1e-17 64.8 11.1 0.0002 22.7 0.1 7.2 7 tr|C3XZJ2|C3XZJ2_BRAFL Uncharacterized protein OS=Branchiost 1.1e-17 64.7 1.7 0.0013 20.2 0.0 6.5 6 tr|C3Y1J1|C3Y1J1_BRAFL Uncharacterized protein (Fragment) OS 1.1e-17 64.6 18.1 0.025 16.1 1.3 7.5 7 tr|C3ZWE3|C3ZWE3_BRAFL Uncharacterized protein OS=Branchiost 1.3e-17 64.5 4.7 1.8e-06 29.2 0.0 8.1 5 tr|C3Y4G7|C3Y4G7_BRAFL Uncharacterized protein OS=Branchiost 2.1e-17 63.8 1.1 0.0026 19.2 0.0 5.0 4 tr|C3YIF0|C3YIF0_BRAFL Uncharacterized protein OS=Branchiost 2.9e-17 63.4 7.1 1.2e-05 26.6 0.1 5.0 4 tr|C3XUG3|C3XUG3_BRAFL Uncharacterized protein OS=Branchiost 3.4e-17 63.1 6.9 4.8e-06 27.9 0.0 7.9 6 tr|C3YV44|C3YV44_BRAFL Uncharacterized protein OS=Branchiost 3.5e-17 63.1 5.2 0.00019 22.8 0.1 5.2 3 tr|C3YDV4|C3YDV4_BRAFL Coronin OS=Branchiostoma floridae OX= 4.7e-17 62.7 8.5 1.4e-06 29.5 1.5 6.5 5 tr|C3Y8Z9|C3Y8Z9_BRAFL Uncharacterized protein OS=Branchiost 5e-17 62.6 20.8 0.00011 23.5 0.5 5.7 5 tr|C3ZDE1|C3ZDE1_BRAFL Uncharacterized protein (Fragment) OS 6.4e-17 62.3 20.6 7.4e-05 24.1 0.1 7.3 5 tr|C3YJB0|C3YJB0_BRAFL Uncharacterized protein OS=Branchiost 7.6e-17 62.0 0.7 2.9e-06 28.5 0.0 5.8 5 tr|C3ZUB0|C3ZUB0_BRAFL Uncharacterized protein (Fragment) OS 1.7e-16 60.9 11.9 0.00057 21.3 0.6 7.3 5 tr|C3ZTK9|C3ZTK9_BRAFL Uncharacterized protein OS=Branchiost 2.4e-16 60.5 0.6 1.1e-09 39.4 0.1 2.7 2 tr|C3XVS3|C3XVS3_BRAFL Uncharacterized protein OS=Branchiost 3.6e-16 59.9 16.2 0.015 16.8 1.1 7.5 6 tr|C3YX50|C3YX50_BRAFL Uncharacterized protein (Fragment) OS 7.4e-16 58.9 0.2 1.9e-05 25.9 0.0 4.7 3 tr|C3YV92|C3YV92_BRAFL Uncharacterized protein OS=Branchiost 9.7e-16 58.5 6.7 0.0013 20.1 0.1 6.4 4 tr|C3ZBE0|C3ZBE0_BRAFL Uncharacterized protein OS=Branchiost 1.2e-15 58.2 22.5 3.8e-05 25.0 0.1 7.5 4 tr|C3YGN3|C3YGN3_BRAFL Uncharacterized protein OS=Branchiost 1.4e-15 58.0 10.2 4.5e-07 31.1 0.1 4.4 3 tr|C3YXD4|C3YXD4_BRAFL Uncharacterized protein OS=Branchiost 2e-15 57.6 6.8 0.0036 18.7 0.0 7.8 5 tr|C3ZKX0|C3ZKX0_BRAFL Uncharacterized protein OS=Branchiost 3.2e-15 56.9 21.5 0.09 14.3 0.2 10.5 6 tr|C3ZLL9|C3ZLL9_BRAFL Uncharacterized protein OS=Branchiost 3.9e-15 56.6 6.4 4.8e-07 31.0 0.0 6.1 4 tr|C3YPC7|C3YPC7_BRAFL Uncharacterized protein OS=Branchiost 4.1e-15 56.5 13.6 0.0065 17.9 0.3 5.1 4 tr|C3ZBB9|C3ZBB9_BRAFL Uncharacterized protein OS=Branchiost 8.5e-15 55.5 10.1 0.0058 18.1 0.0 6.4 6 tr|C3XZ00|C3XZ00_BRAFL Uncharacterized protein OS=Branchiost 1.3e-14 55.0 15.2 0.00098 20.5 0.2 6.7 5 tr|C3Y0K1|C3Y0K1_BRAFL Uncharacterized protein OS=Branchiost 2.3e-14 54.2 15.5 2.3e-05 25.7 0.1 6.0 5 tr|C3YGA6|C3YGA6_BRAFL Uncharacterized protein OS=Branchiost 2.6e-14 54.0 10.6 0.0016 19.9 1.4 7.1 5 tr|C3Z2M1|C3Z2M1_BRAFL Uncharacterized protein OS=Branchiost 4.1e-14 53.4 23.3 5.5e-05 24.5 0.1 6.9 5 tr|C3YSJ1|C3YSJ1_BRAFL Uncharacterized protein OS=Branchiost 4.3e-14 53.3 4.0 3.1e-05 25.3 0.2 4.8 4 tr|C3YYV5|C3YYV5_BRAFL Uncharacterized protein OS=Branchiost 6.5e-14 52.7 19.0 1.4e-06 29.5 1.3 6.2 4 tr|C3XYM7|C3XYM7_BRAFL Uncharacterized protein OS=Branchiost 7e-14 52.6 21.4 0.018 16.5 0.2 8.7 7 tr|C3Y1D3|C3Y1D3_BRAFL Uncharacterized protein OS=Branchiost 7e-14 52.6 5.7 0.00012 23.5 0.0 5.6 4 tr|C3ZCW7|C3ZCW7_BRAFL Uncharacterized protein OS=Branchiost 7.1e-14 52.6 19.0 1.5e-06 29.5 1.3 6.2 4 tr|C3ZYW7|C3ZYW7_BRAFL Uncharacterized protein OS=Branchiost 7.5e-14 52.6 7.8 0.00012 23.4 0.2 4.4 3 tr|C3ZSI2|C3ZSI2_BRAFL Uncharacterized protein OS=Branchiost 7.8e-14 52.5 3.3 2.7e-05 25.5 0.0 4.2 4 tr|C3Z454|C3Z454_BRAFL Uncharacterized protein (Fragment) OS 9.1e-14 52.3 8.4 0.038 15.5 0.0 7.2 6 tr|C3ZDJ4|C3ZDJ4_BRAFL Uncharacterized protein OS=Branchiost 2.3e-13 51.0 6.9 0.0019 19.6 0.1 4.9 4 tr|C3XZ37|C3XZ37_BRAFL Uncharacterized protein (Fragment) OS 3.1e-13 50.6 3.2 2.5e-05 25.6 0.1 4.9 3 tr|C3Y2U8|C3Y2U8_BRAFL Uncharacterized protein (Fragment) OS 3.5e-13 50.4 10.6 4e-06 28.1 0.2 5.2 4 tr|C3YB26|C3YB26_BRAFL Uncharacterized protein OS=Branchiost 1.1e-12 48.9 5.5 0.036 15.6 0.0 5.6 4 tr|C3Y342|C3Y342_BRAFL Uncharacterized protein OS=Branchiost 1.1e-12 48.8 7.8 0.0036 18.7 0.1 5.7 5 tr|C3YIV2|C3YIV2_BRAFL Uncharacterized protein OS=Branchiost 1.1e-12 48.8 2.8 2.2e-05 25.8 0.1 5.1 2 tr|C3Z7P2|C3Z7P2_BRAFL Uncharacterized protein OS=Branchiost 2.1e-12 48.0 5.5 0.0016 19.8 0.1 4.9 4 tr|C3XVC5|C3XVC5_BRAFL Coronin OS=Branchiostoma floridae OX= 2.6e-12 47.7 8.3 9.1e-05 23.8 0.0 5.0 4 tr|C3ZI68|C3ZI68_BRAFL Uncharacterized protein OS=Branchiost 2.9e-12 47.5 1.8 0.012 17.1 0.0 7.5 5 tr|C3XPS5|C3XPS5_BRAFL Uncharacterized protein OS=Branchiost 3.6e-12 47.2 6.5 0.0068 17.9 0.0 5.6 4 tr|C3ZQX4|C3ZQX4_BRAFL Uncharacterized protein (Fragment) OS 7.6e-12 46.2 13.3 0.00099 20.5 1.0 6.1 5 tr|C3Z2G5|C3Z2G5_BRAFL Uncharacterized protein (Fragment) OS 1.1e-11 45.7 8.3 0.11 14.1 0.1 5.8 5 tr|C3Z236|C3Z236_BRAFL Uncharacterized protein OS=Branchiost 1.3e-11 45.4 8.7 0.014 16.9 0.0 7.1 5 tr|C3XS02|C3XS02_BRAFL Uncharacterized protein OS=Branchiost 1.6e-11 45.2 3.5 0.007 17.8 0.1 5.3 4 tr|C3Z1P0|C3Z1P0_BRAFL Uncharacterized protein OS=Branchiost 1.8e-11 45.0 8.9 0.0024 19.3 0.2 4.7 4 tr|C3YG74|C3YG74_BRAFL Uncharacterized protein OS=Branchiost 2.2e-11 44.7 18.7 0.001 20.5 0.3 8.0 5 tr|C3YFV7|C3YFV7_BRAFL Uncharacterized protein (Fragment) OS 3.1e-11 44.3 1.0 3.2e-05 25.3 0.8 3.6 3 tr|C3Z3W0|C3Z3W0_BRAFL Uncharacterized protein OS=Branchiost 4.9e-11 43.6 3.4 0.74 11.4 0.2 6.6 5 tr|C3Y3Z9|C3Y3Z9_BRAFL Serine/threonine-protein phosphatase 6e-11 43.4 3.2 0.00064 21.1 0.1 4.2 2 tr|C3YAX3|C3YAX3_BRAFL Uncharacterized protein OS=Branchiost 6.2e-11 43.3 4.2 0.27 12.8 0.2 8.0 5 tr|C3Z6R5|C3Z6R5_BRAFL Uncharacterized protein OS=Branchiost 1.3e-10 42.3 5.1 0.0064 18.0 0.1 4.4 4 tr|C3ZC78|C3ZC78_BRAFL Uncharacterized protein (Fragment) OS 1.4e-10 42.2 10.5 0.016 16.7 0.4 6.9 6 tr|C3YA29|C3YA29_BRAFL Uncharacterized protein OS=Branchiost 2.1e-10 41.6 23.0 0.0017 19.8 0.1 7.7 4 tr|C3ZBB3|C3ZBB3_BRAFL Uncharacterized protein OS=Branchiost 2.2e-10 41.6 11.7 0.00013 23.3 0.3 5.5 4 tr|C3Y7A7|C3Y7A7_BRAFL Uncharacterized protein OS=Branchiost 4e-10 40.8 11.5 0.00014 23.2 0.5 6.1 4 tr|C3XYH7|C3XYH7_BRAFL Uncharacterized protein (Fragment) OS 4.6e-10 40.6 12.9 0.00056 21.3 0.0 6.2 4 tr|C3ZA58|C3ZA58_BRAFL Uncharacterized protein OS=Branchiost 5.6e-10 40.3 0.3 2.6e-05 25.5 0.0 3.0 2 tr|C3Z3W2|C3Z3W2_BRAFL Uncharacterized protein OS=Branchiost 6.3e-10 40.1 0.1 0.013 17.0 0.0 4.2 3 tr|C3YA39|C3YA39_BRAFL Uncharacterized protein OS=Branchiost 6.4e-10 40.1 24.9 0.00017 22.9 0.3 6.6 4 tr|C3YFB9|C3YFB9_BRAFL Uncharacterized protein OS=Branchiost 1e-09 39.5 0.2 0.0037 18.7 0.0 3.1 2 tr|C3ZSI3|C3ZSI3_BRAFL Uncharacterized protein OS=Branchiost 1.2e-09 39.2 6.4 0.0035 18.8 0.0 5.6 5 tr|C3Y077|C3Y077_BRAFL Uncharacterized protein OS=Branchiost 1.6e-09 38.9 2.1 1.3e-05 26.5 0.1 4.4 2 tr|C3XW13|C3XW13_BRAFL Uncharacterized protein (Fragment) OS 1.6e-09 38.8 0.2 0.0019 19.7 0.0 3.8 3 tr|C3ZGN0|C3ZGN0_BRAFL Uncharacterized protein OS=Branchiost 1.7e-09 38.8 10.7 0.014 16.9 1.1 6.7 5 tr|C3Y1H7|C3Y1H7_BRAFL Uncharacterized protein OS=Branchiost 1.7e-09 38.7 2.6 0.00036 21.9 0.6 4.5 3 tr|C3ZTY1|C3ZTY1_BRAFL Uncharacterized protein OS=Branchiost 2e-09 38.6 14.6 0.92 11.1 0.1 7.7 5 tr|C3YNW4|C3YNW4_BRAFL Uncharacterized protein (Fragment) OS 2.4e-09 38.3 7.0 1.5 10.4 0.0 7.5 6 tr|C3ZCW1|C3ZCW1_BRAFL Uncharacterized protein OS=Branchiost 3.1e-09 37.9 7.6 0.0044 18.5 0.1 4.7 3 tr|C3XTT1|C3XTT1_BRAFL Uncharacterized protein OS=Branchiost 3.1e-09 37.9 7.8 0.12 13.9 0.3 5.5 4 tr|C3Y391|C3Y391_BRAFL Uncharacterized protein (Fragment) OS 3.2e-09 37.9 5.8 0.0011 20.4 0.0 5.5 3 tr|C3ZZC2|C3ZZC2_BRAFL Uncharacterized protein OS=Branchiost 3.8e-09 37.7 3.3 1.8e-05 26.0 0.0 4.5 2 tr|C3Z5D7|C3Z5D7_BRAFL Uncharacterized protein OS=Branchiost 4.1e-09 37.5 1.1 1.5e-05 26.3 0.0 3.8 2 tr|C3Z3M6|C3Z3M6_BRAFL Uncharacterized protein OS=Branchiost 6.6e-09 36.9 3.8 8.1e-05 24.0 0.0 3.3 3 tr|C3ZHQ1|C3ZHQ1_BRAFL Uncharacterized protein OS=Branchiost 6.7e-09 36.9 26.3 0.00049 21.5 0.2 7.8 5 tr|C3Y442|C3Y442_BRAFL Uncharacterized protein OS=Branchiost 8.3e-09 36.6 8.2 0.0064 18.0 0.1 5.4 3 tr|C3ZM62|C3ZM62_BRAFL Uncharacterized protein OS=Branchiost 2.6e-08 35.0 8.9 0.029 15.9 0.1 6.1 4 tr|C3YJB3|C3YJB3_BRAFL Uncharacterized protein OS=Branchiost 4.6e-08 34.2 18.6 0.92 11.1 0.1 7.1 5 tr|C3ZY25|C3ZY25_BRAFL Cation-transporting ATPase OS=Branchi 4.9e-08 34.1 8.1 7.5 8.3 0.0 7.0 5 tr|C3ZGK1|C3ZGK1_BRAFL Uncharacterized protein (Fragment) OS 6e-08 33.9 17.5 0.0028 19.1 0.2 7.4 4 tr|C3ZUA9|C3ZUA9_BRAFL Uncharacterized protein (Fragment) OS 1.1e-07 33.0 7.8 2.1 10.0 0.3 6.8 4 tr|C3YJC9|C3YJC9_BRAFL Uncharacterized protein OS=Branchiost 2.3e-07 32.0 9.1 0.0051 18.3 0.1 5.5 3 tr|C3XS33|C3XS33_BRAFL Uncharacterized protein OS=Branchiost 5.4e-07 30.8 9.5 4.9e-06 27.8 0.4 4.3 2 tr|C3Y6B2|C3Y6B2_BRAFL Uncharacterized protein OS=Branchiost 6.7e-07 30.6 4.9 0.052 15.1 0.1 4.7 3 tr|C3ZZG8|C3ZZG8_BRAFL Uncharacterized protein OS=Branchiost 6.7e-07 30.6 11.2 0.49 12.0 0.0 6.5 4 tr|C3YL72|C3YL72_BRAFL Uncharacterized protein OS=Branchiost 1.5e-06 29.4 2.5 0.64 11.6 0.3 4.6 3 tr|C3ZLI2|C3ZLI2_BRAFL Uncharacterized protein OS=Branchiost 1.8e-06 29.2 3.8 0.16 13.5 0.1 5.3 3 tr|C3Z7S5|C3Z7S5_BRAFL Uncharacterized protein OS=Branchiost 2.2e-06 28.9 7.5 0.0061 18.0 0.4 5.3 4 tr|C3YGP3|C3YGP3_BRAFL Uncharacterized protein OS=Branchiost 2.5e-06 28.8 0.5 0.26 12.9 0.0 4.7 3 tr|C3XZK4|C3XZK4_BRAFL Uncharacterized protein OS=Branchiost 2.9e-06 28.5 5.9 2.9 9.5 0.0 5.7 5 tr|C3ZJF1|C3ZJF1_BRAFL Uncharacterized protein OS=Branchiost 5.9e-06 27.6 10.7 0.012 17.1 1.5 4.9 3 tr|C3Z9Z4|C3Z9Z4_BRAFL Uncharacterized protein OS=Branchiost 6.2e-06 27.5 0.5 0.17 13.4 0.0 3.7 2 tr|C3YHX7|C3YHX7_BRAFL Uncharacterized protein OS=Branchiost 7.3e-06 27.3 6.4 0.0034 18.8 0.0 5.8 2 tr|C3ZI44|C3ZI44_BRAFL Uncharacterized protein OS=Branchiost 9.6e-06 26.9 4.6 0.23 13.1 0.4 6.0 4 tr|C3ZBN4|C3ZBN4_BRAFL Uncharacterized protein (Fragment) OS 1.2e-05 26.6 15.2 0.0098 17.4 0.2 6.6 3 tr|C3Y0L9|C3Y0L9_BRAFL Uncharacterized protein OS=Branchiost 1.2e-05 26.6 8.8 0.078 14.5 0.0 5.4 4 tr|C3YXC1|C3YXC1_BRAFL Uncharacterized protein OS=Branchiost 1.5e-05 26.3 3.1 0.0029 19.0 0.0 3.8 2 tr|C3ZQF8|C3ZQF8_BRAFL Uncharacterized protein (Fragment) OS 2.2e-05 25.8 2.3 0.02 16.4 0.0 3.9 2 tr|C3Z479|C3Z479_BRAFL Uncharacterized protein OS=Branchiost 3.9e-05 25.0 2.6 0.22 13.1 0.1 3.5 2 tr|C3YZZ0|C3YZZ0_BRAFL Uncharacterized protein (Fragment) OS 4e-05 24.9 10.6 0.28 12.8 0.0 4.8 3 tr|C3Y3W9|C3Y3W9_BRAFL Uncharacterized protein OS=Branchiost 5.2e-05 24.6 3.6 2.2 9.9 0.5 4.1 3 tr|C3Y1C2|C3Y1C2_BRAFL Uncharacterized protein OS=Branchiost 6.2e-05 24.3 6.2 0.64 11.6 0.1 4.8 3 tr|C3ZL20|C3ZL20_BRAFL Uncharacterized protein OS=Branchiost 6.4e-05 24.3 0.1 22 6.7 0.0 6.0 3 tr|C3YMT5|C3YMT5_BRAFL Uncharacterized protein (Fragment) OS 0.0001 23.6 0.0 0.11 14.1 0.0 4.0 2 tr|C3Y0U0|C3Y0U0_BRAFL Uncharacterized protein OS=Branchiost 0.00011 23.6 0.4 0.0091 17.5 0.0 3.5 1 tr|C3ZA96|C3ZA96_BRAFL Uncharacterized protein OS=Branchiost 0.00012 23.4 0.1 5.3 8.7 0.0 3.5 3 tr|C3Y230|C3Y230_BRAFL Uncharacterized protein OS=Branchiost 0.00013 23.4 10.8 0.068 14.7 1.0 4.6 3 tr|C3YW17|C3YW17_BRAFL Uncharacterized protein OS=Branchiost 0.00021 22.7 3.4 29 6.4 0.0 5.9 3 tr|C3Y9G8|C3Y9G8_BRAFL Uncharacterized protein OS=Branchiost 0.00045 21.6 1.8 0.15 13.6 0.2 2.8 2 tr|C3YX75|C3YX75_BRAFL Uncharacterized protein OS=Branchiost 0.00056 21.3 0.4 2.2 9.9 0.0 4.0 3 tr|C3Z7I1|C3Z7I1_BRAFL Uncharacterized protein OS=Branchiost 0.0025 19.2 14.5 1.7 10.3 0.3 5.0 3 tr|C3Y926|C3Y926_BRAFL Uncharacterized protein OS=Branchiost 0.0027 19.2 2.2 0.02 16.4 1.0 3.0 1 tr|C3Y7A4|C3Y7A4_BRAFL Uncharacterized protein OS=Branchiost 0.0028 19.1 0.0 54 5.5 0.0 4.0 3 tr|C3YWN0|C3YWN0_BRAFL Uncharacterized protein OS=Branchiost 0.0033 18.9 9.6 1.5 10.4 0.1 5.4 4 tr|C3YFA9|C3YFA9_BRAFL Uncharacterized protein OS=Branchiost 0.0035 18.8 10.4 6.1 8.5 0.0 5.4 3 tr|C3XXZ1|C3XXZ1_BRAFL Uncharacterized protein (Fragment) OS 0.0039 18.6 2.0 4.9 8.8 0.0 5.1 2 tr|C3Z8X0|C3Z8X0_BRAFL Uncharacterized protein (Fragment) OS 0.004 18.6 3.9 0.28 12.8 0.0 4.6 2 tr|C3Z7Q0|C3Z7Q0_BRAFL Uncharacterized protein OS=Branchiost 0.0062 18.0 0.0 6.1 8.5 0.0 2.4 2 tr|C3YNZ8|C3YNZ8_BRAFL Uncharacterized protein (Fragment) OS 0.0063 18.0 3.4 6 8.6 0.2 4.3 3 tr|C3Y4L7|C3Y4L7_BRAFL Uncharacterized protein OS=Branchiost ------ inclusion threshold ------ 0.012 17.1 2.8 0.84 11.3 0.3 4.5 2 tr|C3Y5V0|C3Y5V0_BRAFL Uncharacterized protein OS=Branchiost 0.025 16.1 0.0 0.29 12.7 0.0 5.3 2 tr|C3YHX4|C3YHX4_BRAFL Uncharacterized protein OS=Branchiost 0.033 15.7 0.2 32 6.2 0.0 3.1 2 tr|C3Z291|C3Z291_BRAFL Uncharacterized protein OS=Branchiost 0.037 15.5 2.5 65 5.3 0.0 4.9 2 tr|C3ZM38|C3ZM38_BRAFL Uncharacterized protein OS=Branchiost 0.046 15.3 0.0 0.35 12.5 0.0 2.4 1 tr|C3ZJB1|C3ZJB1_BRAFL Uncharacterized protein OS=Branchiost 0.065 14.8 0.0 9.8 7.9 0.0 3.4 2 tr|C3Z075|C3Z075_BRAFL Uncharacterized protein OS=Branchiost 0.075 14.6 0.1 23 6.7 0.0 3.8 2 tr|C3YKV1|C3YKV1_BRAFL Uncharacterized protein (Fragment) OS 0.092 14.3 7.3 27 6.5 0.0 5.3 2 tr|C3Z2E8|C3Z2E8_BRAFL Uncharacterized protein (Fragment) OS 0.097 14.2 7.5 59 5.4 0.0 5.7 3 tr|C3YZB8|C3YZB8_BRAFL Uncharacterized protein OS=Branchiost 0.1 14.2 0.0 0.53 11.9 0.0 2.3 1 tr|C3Y4D1|C3Y4D1_BRAFL Vacuolar protein sorting-associated p 0.1 14.2 0.2 3.5 9.3 0.0 3.6 1 tr|C3YL56|C3YL56_BRAFL Uncharacterized protein OS=Branchiost 0.1 14.2 4.7 2.8 9.6 0.0 5.1 1 tr|C3Z8N1|C3Z8N1_BRAFL Uncharacterized protein OS=Branchiost 0.11 14.0 0.6 3.4 9.3 0.0 3.7 1 tr|C3YN27|C3YN27_BRAFL Uncharacterized protein OS=Branchiost 0.15 13.7 0.2 1.1 10.9 0.2 2.5 1 tr|C3YDK3|C3YDK3_BRAFL Uncharacterized protein OS=Branchiost 0.17 13.4 0.1 1.2 10.8 0.0 2.4 1 tr|C3YF41|C3YF41_BRAFL Uncharacterized protein OS=Branchiost 0.18 13.4 1.0 6.8 8.4 0.0 3.6 1 tr|C3XUW3|C3XUW3_BRAFL Uncharacterized protein OS=Branchiost 0.19 13.3 5.3 94 4.8 0.0 5.7 2 tr|C3Z0T8|C3Z0T8_BRAFL Uncharacterized protein OS=Branchiost 0.22 13.1 2.0 18 7.1 0.0 5.1 1 tr|C3Z0U1|C3Z0U1_BRAFL Elongator complex protein 1 OS=Branch 0.22 13.1 4.6 26 6.6 0.5 3.6 2 tr|C3YT94|C3YT94_BRAFL Uncharacterized protein (Fragment) OS 0.26 12.9 0.3 5.1 8.8 0.0 2.9 1 tr|C3ZBA8|C3ZBA8_BRAFL Uncharacterized protein OS=Branchiost 0.36 12.4 6.5 3 9.5 0.0 5.2 1 tr|C3YUN5|C3YUN5_BRAFL Uncharacterized protein OS=Branchiost 0.37 12.4 0.6 56 5.5 0.1 3.7 1 tr|C3ZG70|C3ZG70_BRAFL Uncharacterized protein OS=Branchiost 0.64 11.6 12.1 2.7 9.7 1.1 4.8 2 tr|C3Y7Z6|C3Y7Z6_BRAFL Uncharacterized protein OS=Branchiost 0.65 11.6 0.0 0.65 11.6 0.0 5.7 2 tr|C3ZA32|C3ZA32_BRAFL Uncharacterized protein OS=Branchiost 0.71 11.5 3.3 1e+02 4.7 0.5 4.6 1 tr|C3Z6N6|C3Z6N6_BRAFL Eukaryotic translation initiation fac Domain annotation for each sequence (and alignments): >> tr|C3Z4J5|C3Z4J5_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_128562 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.4 0.0 9.1e-05 0.0094 6 37 .. 1585 1617 .. 1581 1618 .. 0.81 2 ! 20.0 1.0 1.4e-05 0.0015 1 38 [] 1622 1659 .. 1622 1659 .. 0.88 3 ! 17.7 0.6 7.4e-05 0.0077 5 38 .] 1667 1701 .. 1663 1701 .. 0.86 4 ! 20.6 0.1 8.8e-06 0.00092 12 38 .] 1715 1744 .. 1704 1744 .. 0.82 5 ! 19.2 0.0 2.6e-05 0.0027 4 38 .] 1751 1786 .. 1748 1786 .. 0.90 6 ! 20.2 0.6 1.2e-05 0.0013 4 37 .. 1793 1827 .. 1790 1827 .. 0.89 7 ? 7.9 0.2 0.093 9.7 10 34 .. 1884 1908 .. 1879 1910 .. 0.82 8 ? 10.6 0.1 0.013 1.3 2 37 .. 1917 1953 .. 1916 1954 .. 0.83 9 ! 36.0 0.2 1.2e-10 1.3e-08 4 38 .] 1973 2008 .. 1970 2008 .. 0.92 10 ! 24.6 0.4 4.7e-07 4.9e-05 3 38 .] 2017 2054 .. 2015 2054 .. 0.87 11 ! 16.4 0.6 0.00019 0.02 6 38 .] 2063 2094 .. 2058 2094 .. 0.71 12 ! 12.2 0.0 0.004 0.41 13 38 .] 2162 2180 .. 2148 2180 .. 0.79 13 ! 23.1 0.1 1.5e-06 0.00016 1 38 [] 2184 2221 .. 2184 2221 .. 0.86 14 ! 16.0 0.0 0.00025 0.026 10 37 .. 2234 2262 .. 2229 2263 .. 0.90 15 ! 13.9 0.2 0.0012 0.12 4 37 .. 2276 2310 .. 2273 2311 .. 0.77 16 ? 3.0 0.1 3.2 3.3e+02 11 38 .] 2333 2358 .. 2322 2358 .. 0.79 17 ? 5.1 0.0 0.72 75 16 37 .. 2514 2527 .. 2493 2528 .. 0.67 Alignments for each domain: == domain 1 score: 17.4 bits; conditional E-value: 9.1e-05 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriW 37 +l+ + vt++a+spdg+ +++G++D+ v+++ tr|C3Z4J5|C3Z4J5_BRAFL 1585 ILDSFgDAVTCVAVSPDGKVFVCGTEDCVVYLY 1617 55544334**********************997 PP == domain 2 score: 20.0 bits; conditional E-value: 1.4e-05 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g++l+++ GH + +t+++f + +++ Dgt+ iWd tr|C3Z4J5|C3Z4J5_BRAFL 1622 GKQLKSFVGHaNKITDCCFVGTDKICSTSA-DGTLCIWD 1659 6889******999****9999999976655.*******9 PP == domain 3 score: 17.7 bits; conditional E-value: 7.4e-05 EEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGHss.vtslafspdgawlasGsdDgtvriWd 38 +lt H+ +s++ +p g++++s+s+D+t+ iW+ tr|C3Z4J5|C3Z4J5_BRAFL 1667 SSLTNHKRrTNSCCSDPRGKFVVSASWDCTILIWK 1701 56788855579***********************6 PP == domain 4 score: 20.6 bits; conditional E-value: 8.8e-06 S...EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 s...vtslafspdgawlasGsdDgtvriWd 38 + ++++af+p+ + +++G++D t++++d tr|C3Z4J5|C3Z4J5_BRAFL 1715 DkrpINCVAFHPEDDKIVTGCWDSTLKVYD 1744 2456************************98 PP == domain 5 score: 19.2 bits; conditional E-value: 2.6e-05 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + +++GH ssv+++a+s++g+ las+ g v++W+ tr|C3Z4J5|C3Z4J5_BRAFL 1751 IAIIRGHnSSVRDVAYSRNGRHLASAALSGEVKLWS 1786 56789**888**************9999*******5 PP == domain 6 score: 20.2 bits; conditional E-value: 1.2e-05 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 ++ ltGH + ++ l fsp g+ l++ + D++v++W tr|C3Z4J5|C3Z4J5_BRAFL 1793 VGDLTGHcGQINRLTFSPAGHHLITVGNDHKVKVW 1827 6779***666*************99888******* PP == domain 7 score: 7.9 bits; conditional E-value: 0.093 S.SSEEEEEEETTSSEEEEEETTSEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtv 34 H +v+++ + +d++++ +GsdD + tr|C3Z4J5|C3Z4J5_BRAFL 1884 HnAPVRCVTWIDDNSLI-TGSDDSYL 1908 8667****999999997.7**99766 PP == domain 8 score: 10.6 bits; conditional E-value: 0.013 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +++ +l GH +svt++a+ + ++ +s+s D t +W tr|C3Z4J5|C3Z4J5_BRAFL 1917 SKVMSLVGHtGSVTDVAYTKLESLAVSASSDFTAIVW 1953 678899***888****88888888777777******* PP == domain 9 score: 36.0 bits; conditional E-value: 1.2e-10 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +l+GH ++vt++afs d++ +++Gs+D+t+r+Wd tr|C3Z4J5|C3Z4J5_BRAFL 1973 RCVLRGHgGPVTCCAFSGDSRSVVTGSRDKTLRLWD 2008 56899**888*************************9 PP == domain 10 score: 24.6 bits; conditional E-value: 4.7e-07 EEEEEE.SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtlt.GH.ssvtslafspdgawlasGsdDgtvriWd 38 ++r+++ H +++ts+a+s g++++++s D t+++Wd tr|C3Z4J5|C3Z4J5_BRAFL 2017 PTRVISeCHqDWITSCAWSETGDYVVTASNDFTLKLWD 2054 566665599777*************************9 PP == domain 11 score: 16.4 bits; conditional E-value: 0.00019 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++ GH s ++s+a+s+ ++s+++Dgtv++W+ tr|C3Z4J5|C3Z4J5_BRAFL 2063 KFVGHtSAINSVATSHGC--VVSACYDGTVKVWS 2094 588**777**99544333..456666*******5 PP == domain 12 score: 12.2 bits; conditional E-value: 0.004 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 vt + ++++ ++dDgtvriW+ tr|C3Z4J5|C3Z4J5_BRAFL 2162 VTQV------TMVT-AGDDGTVRIWK 2180 8888......8876.555*******6 PP == domain 13 score: 23.1 bits; conditional E-value: 1.5e-06 TEEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 g+ +rtltGHs+ v ++a +++ + s+s Dgtvr+W+ tr|C3Z4J5|C3Z4J5_BRAFL 2184 GNEIRTLTGHSDrVLGVAMATNKHIV-SSSLDGTVRLWN 2221 5789******556****999999997.6777*******8 PP == domain 14 score: 16.0 bits; conditional E-value: 0.00025 S.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvriW 37 H vt++ f p ++++++s+Dgt+ +W tr|C3Z4J5|C3Z4J5_BRAFL 2234 HdAEVTGVVFLPADSYVVTCSRDGTIALW 2262 8555************************* PP == domain 15 score: 13.9 bits; conditional E-value: 0.0012 EEEEESS.SS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGH.ss.vtslafspdgawlasGsdDgtvriW 37 + ++ GH + vt+ +f + ++ a++sdDg+v++W tr|C3Z4J5|C3Z4J5_BRAFL 2276 ICSIQGHaGRpVTAACFVKGVTF-ATASDDGSVKVW 2310 456789*6337998877777788.78999******* PP == domain 16 score: 3.0 bits; conditional E-value: 3.2 SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriWd 38 s++ sl ++g+ +++G++Dg + Wd tr|C3Z4J5|C3Z4J5_BRAFL 2333 SPILSL--ASNGHVIVAGGWDGVSHTWD 2358 457777..889999********988887 PP == domain 17 score: 5.1 bits; conditional E-value: 0.72 EEEETTSSEEEEEETTSEEEEE CS WD40 16 lafspdgawlasGsdDgtvriW 37 + ++++s D+t+++W tr|C3Z4J5|C3Z4J5_BRAFL 2514 V--------IFTASHDQTLKVW 2527 2........567777******* PP >> tr|C3Y5Y4|C3Y5Y4_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_91330 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.2 0.0 0.017 1.8 4 37 .. 623 658 .. 620 659 .. 0.79 2 ! 28.0 0.1 4.2e-08 4.4e-06 4 38 .] 666 701 .. 663 701 .. 0.95 3 ! 31.4 0.5 3.6e-09 3.7e-07 2 38 .] 706 743 .. 705 743 .. 0.93 4 ! 26.2 0.3 1.6e-07 1.6e-05 4 38 .] 750 785 .. 747 785 .. 0.83 5 ! 15.1 0.5 0.00049 0.051 6 37 .. 793 825 .. 789 825 .. 0.88 6 ! 29.5 0.4 1.4e-08 1.5e-06 2 38 .] 831 870 .. 830 870 .. 0.91 7 ! 24.5 0.2 5.3e-07 5.6e-05 1 37 [. 874 913 .. 874 914 .. 0.91 8 ? 10.0 0.0 0.02 2.1 2 38 .] 920 957 .. 919 957 .. 0.89 9 ! 21.5 0.0 4.8e-06 0.0005 8 38 .] 969 1000 .. 961 1000 .. 0.88 10 ! 23.8 0.8 8.5e-07 8.9e-05 5 38 .] 1017 1051 .. 1015 1051 .. 0.93 11 ? 5.9 0.1 0.4 42 4 32 .. 1058 1086 .. 1055 1092 .. 0.81 12 ? 5.2 0.0 0.66 69 4 34 .. 1146 1179 .. 1143 1180 .. 0.82 13 ? 10.7 0.4 0.012 1.3 8 38 .] 1290 1323 .. 1283 1323 .. 0.72 14 ? 7.0 0.0 0.18 19 9 38 .] 1347 1371 .. 1331 1371 .. 0.79 15 ! 22.2 0.0 2.9e-06 0.0003 11 37 .. 1485 1511 .. 1471 1512 .. 0.87 Alignments for each domain: == domain 1 score: 10.2 bits; conditional E-value: 0.017 EEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGH.ssvtsla.fspdgawlasGsdDgtvriW 37 ++t++ H + v ++a +s+ + +++Gs D t+r W tr|C3Y5Y4|C3Y5Y4_BRAFL 623 VKTYDRHtDAVLCIAvTSDRTKRVFTGSADFTIRAW 658 789999*666*****65555555889********99 PP == domain 2 score: 28.0 bits; conditional E-value: 4.2e-08 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 l++l+GH s+v+++a s+d + las+s+D tv+iWd tr|C3Y5Y4|C3Y5Y4_BRAFL 666 LGILRGHcSHVYAMALSRDDRRLASASYDTTVKIWD 701 789****999*************************9 PP == domain 3 score: 31.4 bits; conditional E-value: 3.6e-09 EEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 ++l+tlt Hs+ v+++af +dg+ ++sGs D+tvr+Wd tr|C3Y5Y4|C3Y5Y4_BRAFL 706 ENLWTLTSHSDkVNAVAFVDDGKRVVSGSSDKTVRVWD 743 6899*****666****************99*******9 PP == domain 4 score: 26.2 bits; conditional E-value: 1.6e-07 EEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtsla.fspdgawlasGsdDgtvriWd 38 ++ltGH + v++l+ f+++++ asGs D+t+riW+ tr|C3Y5Y4|C3Y5Y4_BRAFL 750 SKVLTGHtGQVRALCaFHRSNNV-ASGSSDNTIRIWN 785 6789***777*****66666666.89*88*******8 PP == domain 5 score: 15.1 bits; conditional E-value: 0.00049 EEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 6 tltGHss.vtslafspdgawlasGsdDgtvriW 37 +ltGH++ v sla d ++l+s+s D++v +W tr|C3Y5Y4|C3Y5Y4_BRAFL 793 KLTGHDGiVFSLAITNDDKYLVSASGDRSVGVW 825 699**5558************99988****999 PP == domain 6 score: 29.5 bits; conditional E-value: 1.4e-08 EEEEEEESS.SSEEEEEEETTSSEEEEEE..TTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGs..dDgtvriWd 38 +++++l GH +sv+s+ spd + ++sG+ dD t+riW+ tr|C3Y5Y4|C3Y5Y4_BRAFL 831 ELIHKLHGHtNSVYSVTLSPDDTRIVSGGgmDDDTIRIWS 870 6899*****999***************95569*******5 PP == domain 7 score: 24.5 bits; conditional E-value: 5.3e-07 TEEEEEEESS.SSEEEEE..EETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGH.ssvtsla..fspdgawlasGsdDgtvriW 37 g+++ +++GH +s+++++ s ga+l+sGs D t+r+W tr|C3Y5Y4|C3Y5Y4_BRAFL 874 GKQVCVYRGHsDSIRCVSvvKSAQGALLLSGSLDTTCRLW 913 577899****777****999******************** PP == domain 8 score: 10.0 bits; conditional E-value: 0.02 EEEEEEESSSSE..EEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGHssv..tslafspdgawlasGsdDgtvriWd 38 q ++ l GH + +++a s +g+ +sGs++g +r W+ tr|C3Y5Y4|C3Y5Y4_BRAFL 920 QEVHRLPGH-DLatYAVAISVNGSRAVSGSRNGELRAWN 957 67899****.744589999*******************8 PP == domain 9 score: 21.5 bits; conditional E-value: 4.8e-06 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++H s++++a+ +dg+ ++sGs+D+ v++W+ tr|C3Y5Y4|C3Y5Y4_BRAFL 969 SAHsRSIRAVAVAQDGNTFVSGSKDRQVKVWS 1000 699555*************************5 PP == domain 10 score: 23.8 bits; conditional E-value: 8.5e-07 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++lt H + v ++a s+d+++ asG++Dg v +W+ tr|C3Y5Y4|C3Y5Y4_BRAFL 1017 HVLTCHgGTVQAVAISKDSKLAASGGWDGIVVVWN 1051 899***666*************************8 PP == domain 11 score: 5.9 bits; conditional E-value: 0.4 EEEEESS.SS.EEEEEEETTSSEEEEEETTS CS WD40 4 lrtltGH.ss.vtslafspdgawlasGsdDg 32 ++t++ H s v s+afs d + +a +s+D+ tr|C3Y5Y4|C3Y5Y4_BRAFL 1058 VQTFR-HvSYgVMSVAFSGDDTIFA-CSRDN 1086 67776.87557************97.88897 PP == domain 12 score: 5.2 bits; conditional E-value: 0.66 EEEEESS.SS..EEEEEEETTSSEEEEEETTSEE CS WD40 4 lrtltGH.ss..vtslafspdgawlasGsdDgtv 34 r + GH ++ +t+la+++ +l+s+s gt+ tr|C3Y5Y4|C3Y5Y4_BRAFL 1146 SRGYCGHpDGavITALAVDHKEELLLSASTGGTI 1179 56688**866878************999878876 PP == domain 13 score: 10.7 bits; conditional E-value: 0.012 ESS.SSEEEEE..EETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtsla..fspdgawlasGsdDgtvriWd 38 +H ++vts+ + + + ++s+s D+tv++W+ tr|C3Y5Y4|C3Y5Y4_BRAFL 1290 GAHtGDVTSVVatTLEHEPVVLSSSLDHTVKVWS 1323 68988899995554444444566899*******5 PP == domain 14 score: 7.0 bits; conditional E-value: 0.18 SSSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GHssvtslafspdgawlasGsdDgtvriWd 38 +H svts+ g+++++Gs D+++r +d tr|C3Y5Y4|C3Y5Y4_BRAFL 1347 THLSVTSC-----GSYVVTGSADNKLRAYD 1371 35447777.....************99766 PP == domain 15 score: 22.2 bits; conditional E-value: 2.9e-06 SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriW 37 ++vt++ + +dg++++sGs D++vr+W tr|C3Y5Y4|C3Y5Y4_BRAFL 1485 QDVTCVTVTSDGRLVLSGSADKSVRVW 1511 57************************* PP >> tr|C3YZV6|C3YZV6_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_276588 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 27.0 0.2 8.7e-08 9e-06 5 38 .] 604 638 .. 601 638 .. 0.89 2 ! 29.0 0.2 2.1e-08 2.1e-06 1 38 [] 642 680 .. 642 680 .. 0.91 3 ! 30.1 1.3 8.7e-09 9.1e-07 2 38 .] 731 768 .. 730 768 .. 0.94 4 ! 24.1 0.3 7.1e-07 7.4e-05 2 38 .] 773 810 .. 772 810 .. 0.88 5 ! 23.0 0.4 1.6e-06 0.00017 3 38 .] 816 853 .. 814 853 .. 0.86 6 ! 22.2 0.0 2.7e-06 0.00028 3 38 .] 859 895 .. 857 895 .. 0.89 7 ? 5.7 0.0 0.46 48 12 36 .. 949 977 .. 931 977 .. 0.81 8 ! 29.5 0.1 1.3e-08 1.4e-06 4 37 .. 987 1021 .. 984 1022 .. 0.89 9 ! 21.9 0.0 3.4e-06 0.00035 6 38 .] 1030 1064 .. 1024 1064 .. 0.90 10 ! 13.5 0.0 0.0016 0.17 12 38 .] 1081 1107 .. 1069 1107 .. 0.87 11 ! 24.5 0.5 5.3e-07 5.5e-05 2 38 .] 1112 1149 .. 1111 1149 .. 0.95 12 ? 7.1 0.2 0.17 18 4 29 .. 1156 1185 .. 1153 1198 .. 0.74 Alignments for each domain: == domain 1 score: 27.0 bits; conditional E-value: 8.7e-08 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 t + H ++v+ +fspdg+ +as+++D+++++Wd tr|C3YZV6|C3YZV6_BRAFL 604 LTVKVHsGGVHFAKFSPDGNRVASCGEDCSIKVWD 638 577899666*9999********************9 PP == domain 2 score: 29.0 bits; conditional E-value: 2.1e-08 TEEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 gq + tl+GH + v+++ fspdga ++s+ D+ +++W+ tr|C3YZV6|C3YZV6_BRAFL 642 GQVQLTLEGHRDvVYCCGFSPDGATIVSCAADRLIHVWN 680 67899*****5547***************99*******8 PP == domain 3 score: 30.1 bits; conditional E-value: 8.7e-09 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 l+t+t+H +sv++++ s dg++++s+s Dgt +Wd tr|C3YZV6|C3YZV6_BRAFL 731 AELHTFTAHtDSVRCCDISTDGSLVVSASTDGTAVVWD 768 579******888****************99*******9 PP == domain 4 score: 24.1 bits; conditional E-value: 7.1e-07 EEEEEEESS..SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH..ssvtslafspdgawlasGsdDgtvriWd 38 ++++t++GH s t+++f p+++ +as+ D+ v++Wd tr|C3YZV6|C3YZV6_BRAFL 773 KQITTYSGHnrSALTACSFKPESHVVASSA-DHQVHVWD 810 56899****7555************99766.*******9 PP == domain 5 score: 23.0 bits; conditional E-value: 1.6e-06 EEEEEESSSS..EEEEEEETTSSEEEEE.ETTSEEEEEE CS WD40 3 clrtltGHss..vtslafspdgawlasG.sdDgtvriWd 38 +l+++++H+s + +++fspdg+++a G s + ++++Wd tr|C3YZV6|C3YZV6_BRAFL 816 KLGVCKAHKStfIQHCCFSPDGSLIAGGlS-NFSIHLWD 853 68999***4447************986677.*******9 PP == domain 6 score: 22.2 bits; conditional E-value: 2.7e-06 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 c+ GH +v+++afs +g+ l+s+s+D +v +Wd tr|C3YZV6|C3YZV6_BRAFL 859 CVAMHYGHtMWVYCVAFSANGKQLLSSSEDEKVILWD 895 6666679*777*************************9 PP == domain 7 score: 5.7 bits; conditional E-value: 0.46 S....EEEEEEETTSSEEEEEETTSEEEE CS WD40 12 s....vtslafspdgawlasGsdDgtvri 36 + +++++ +p+g+ +a G++Dg v++ tr|C3YZV6|C3YZV6_BRAFL 949 FaksrIRACCICPSGDKVAYGCEDGVVKL 977 0444699999*******988999****97 PP == domain 8 score: 29.5 bits; conditional E-value: 1.3e-08 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 r+l GH v++++fs+dg+ l++G+dD +v iW tr|C3YZV6|C3YZV6_BRAFL 987 SRELVGHnEAVRCCSFSRDGRVLITGGDDSKVLIW 1021 68899**555************************* PP == domain 9 score: 21.9 bits; conditional E-value: 3.4e-06 EEESS.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtsla.fspdgawlasGsdDgtvriWd 38 ++ GH sv++l+ fsp + ++++s+Dgt+++Wd tr|C3YZV6|C3YZV6_BRAFL 1030 ECVGHrESVRHLKvFSPKRKKFLTASYDGTIKVWD 1064 567**999*************99***********9 PP == domain 10 score: 13.5 bits; conditional E-value: 0.0016 SEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriWd 38 +v s++ +pd + +as s D+ vriWd tr|C3YZV6|C3YZV6_BRAFL 1081 WVLSCDLCPDESKIASTSVDRAVRIWD 1107 4889999********99*********9 PP == domain 11 score: 24.5 bits; conditional E-value: 5.3e-07 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +l+++tGH ++++s+af+ d++ la+G+d g v++Wd tr|C3YZV6|C3YZV6_BRAFL 1112 ALLHKFTGHvDCIRSCAFNLDSSILATGDDAGYVKVWD 1149 679******999*************************9 PP == domain 12 score: 7.1 bits; conditional E-value: 0.17 EEEEESSSS....EEEEEEETTSSEEEEEE CS WD40 4 lrtltGHss....vtslafspdgawlasGs 29 + t++ Hs+ v++l+fs+dg+ l+s+ tr|C3YZV6|C3YZV6_BRAFL 1156 IVTCDHHSGggvwVRGLQFSSDGKQLVSAA 1185 55777784457889************9875 PP >> tr|C3ZAU7|C3ZAU7_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_68590 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 8.8 0.0 0.048 5.1 25 38 .] 668 680 .. 634 680 .. 0.76 2 ! 25.4 0.4 2.8e-07 2.9e-05 5 38 .] 688 722 .. 684 722 .. 0.92 3 ! 26.7 0.0 1e-07 1.1e-05 3 38 .] 728 764 .. 726 764 .. 0.91 4 ! 25.0 1.5 3.6e-07 3.7e-05 3 38 .] 829 865 .. 827 865 .. 0.94 5 ! 17.7 0.2 7.2e-05 0.0075 5 38 .] 872 906 .. 868 906 .. 0.92 6 ! 23.9 0.0 7.9e-07 8.2e-05 2 38 .] 911 950 .. 910 950 .. 0.89 7 ! 11.5 0.0 0.0067 0.7 1 38 [] 954 994 .. 954 994 .. 0.83 8 ! 18.1 0.0 5.6e-05 0.0058 7 38 .] 1005 1037 .. 1000 1037 .. 0.92 9 ! 23.9 0.0 8e-07 8.3e-05 8 38 .] 1049 1080 .. 1042 1080 .. 0.90 10 ! 26.8 0.2 9.7e-08 1e-05 6 38 .] 1105 1138 .. 1102 1138 .. 0.95 11 ? 6.2 0.2 0.32 33 4 30 .. 1233 1261 .. 1230 1266 .. 0.79 12 ? 9.4 0.1 0.03 3.1 9 37 .. 1386 1426 .. 1381 1426 .. 0.75 13 ? 5.4 0.0 0.58 60 16 38 .] 1451 1473 .. 1447 1473 .. 0.89 14 ! 16.6 0.0 0.00017 0.017 11 37 .. 1588 1614 .. 1577 1614 .. 0.86 Alignments for each domain: == domain 1 score: 8.8 bits; conditional E-value: 0.048 EEEEETTSEEEEEE CS WD40 25 lasGsdDgtvriWd 38 ++ Gs D+t+r+Wd tr|C3ZAU7|C3ZAU7_BRAFL 668 FM-GSADRTIRVWD 680 33.999*******9 PP == domain 2 score: 25.4 bits; conditional E-value: 2.8e-07 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +l GH ++vt+la +d a lasGs+D vriWd tr|C3ZAU7|C3ZAU7_BRAFL 688 SVLLGHhGDVTALAIRKDDAILASGSRDSAVRIWD 722 567799899*************************9 PP == domain 3 score: 26.7 bits; conditional E-value: 1e-07 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +l tl+GH +sv+++af dga l+s s D+tv++W+ tr|C3ZAU7|C3ZAU7_BRAFL 728 LLCTLEGHrGSVNGVAFLEDGATLVSVSSDQTVKVWK 764 6789****999*************98777*******6 PP == domain 4 score: 25.0 bits; conditional E-value: 3.6e-07 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 c+ tl GH + +++++ +++++++++s D+tvr+Wd tr|C3ZAU7|C3ZAU7_BRAFL 829 CVSTLVGHtGEINGVCAFHHKNMVTTCSNDNTVRLWD 865 999*****777*************************9 PP == domain 5 score: 17.7 bits; conditional E-value: 7.2e-05 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + l+GH + v ++a d ++l+s+s D+ v +Wd tr|C3ZAU7|C3ZAU7_BRAFL 872 HCLEGHeKAVLDVAITTDDSFLVSASGDRQVGVWD 906 7799**999**************9988*******9 PP == domain 6 score: 23.9 bits; conditional E-value: 7.9e-07 EEEEEEESSSS.EEEEEEETTSSEEEEEE..TTSEEEEEE CS WD40 2 qclrtltGHss.vtslafspdgawlasGs..dDgtvriWd 38 ++l++l GH++ v ++a pd a l+sG+ dD t+riW+ tr|C3ZAU7|C3ZAU7_BRAFL 911 DLLHKLVGHTDmVAAIAITPDDANLVSGGgmDDTTIRIWK 950 689******888***************95569*******6 PP == domain 7 score: 11.5 bits; conditional E-value: 0.0067 TEEEEEEESS.SSEEEEE..EETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtsla..fspdgawlasGsdDgtvriWd 38 g++++t++GH ++ +l g++l+sGs t+riW+ tr|C3ZAU7|C3ZAU7_BRAFL 954 GNQVGTFRGHgEGIKALIavDTEKGRMLLSGSVEATCRIWK 994 57899*****77788887767777777899**********6 PP == domain 8 score: 18.1 bits; conditional E-value: 5.6e-05 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 l GH s+v+++a s+ g++ +sGs+ g +++W+ tr|C3ZAU7|C3ZAU7_BRAFL 1005 LLGHdSPVYAVAISRKGRLAVSGSRSGELKLWN 1037 67**888*************************8 PP == domain 9 score: 23.9 bits; conditional E-value: 8e-07 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++H s+++la+s d ++++sGs+D++v+iWd tr|C3ZAU7|C3ZAU7_BRAFL 1049 SAHsRSIRALAVSEDESMVVSGSKDRKVKIWD 1080 489555*************************9 PP == domain 10 score: 26.8 bits; conditional E-value: 9.7e-08 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +l+GH + v ++a s+d+++++sG++D+ v +W+ tr|C3ZAU7|C3ZAU7_BRAFL 1105 VLRGHvGAVQCVAISQDSKLVVSGGWDNLVFLWN 1138 799**999*************************8 PP == domain 11 score: 6.2 bits; conditional E-value: 0.32 EEEEESS..SSE.EEEEEETTSSEEEEEET CS WD40 4 lrtltGH..ssv.tslafspdgawlasGsd 30 l+++ GH +sv t+la+s dg+ l+s+s tr|C3ZAU7|C3ZAU7_BRAFL 1233 LGSC-GHpiGSVlTALAVSCDGRTLVSAST 1261 5565.99888888*************9985 PP == domain 12 score: 9.4 bits; conditional E-value: 0.03 SSSS.EEEEE...........EETTSSEEEEEETTSEEEEE CS WD40 9 GHss.vtsla...........fspdgawlasGsdDgtvriW 37 +H+ vt++ p+ ++++s+s D+t+++W tr|C3ZAU7|C3ZAU7_BRAFL 1386 AHDAvVTDVVttdgggrqtilSVPNTRLVLSASLDRTIKLW 1426 563445777666666666666779999999*********** PP == domain 13 score: 5.4 bits; conditional E-value: 0.58 EEEETTSSEEEEEETTSEEEEEE CS WD40 16 lafspdgawlasGsdDgtvriWd 38 la+ pdg +++Gs D+++r +d tr|C3ZAU7|C3ZAU7_BRAFL 1451 LATAPDGCHFVTGSVDNKLRAYD 1473 7889**************99766 PP == domain 14 score: 16.6 bits; conditional E-value: 0.00017 SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriW 37 + vt++ + +dg+ ++sGs D+ +r+W tr|C3ZAU7|C3ZAU7_BRAFL 1588 QEVTCVTVTSDGSRIVSGSADRALRVW 1614 34************************* PP >> sp|C3XVT5|LIS1_BRAFL Lissencephaly-1 homolog OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_59218 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 26.6 0.0 1.2e-07 1.2e-05 5 38 .] 100 134 .. 98 134 .. 0.96 2 ! 33.7 0.0 6.3e-10 6.6e-08 4 38 .] 141 176 .. 138 176 .. 0.92 3 ! 32.8 0.1 1.2e-09 1.3e-07 2 37 .. 181 217 .. 180 218 .. 0.91 4 ! 34.6 0.3 3.3e-10 3.4e-08 2 37 .. 223 259 .. 222 260 .. 0.96 5 ! 22.6 0.0 2e-06 0.00021 2 38 .] 265 320 .. 264 320 .. 0.78 6 ! 39.4 1.8 1e-11 1.1e-09 1 38 [] 324 362 .. 324 362 .. 0.96 7 ! 31.8 0.1 2.5e-09 2.6e-07 2 37 .. 367 403 .. 366 404 .. 0.93 Alignments for each domain: == domain 1 score: 26.6 bits; conditional E-value: 1.2e-07 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++l+GH s++t + f+p + ++s+s+D t++iWd sp|C3XVT5|LIS1_BRAFL 100 YSLSGHrSPITRVLFHPVYSVMVSASEDATIKIWD 134 5899******************************9 PP == domain 2 score: 33.7 bits; conditional E-value: 6.3e-10 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 rtl+GH + v +++f++ g++las+s D t+++Wd sp|C3XVT5|LIS1_BRAFL 141 ERTLKGHtDAVQDVSFDQQGKLLASCSADMTIKLWD 176 689****666*************************9 PP == domain 3 score: 32.8 bits; conditional E-value: 1.2e-09 EEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGHss.vtslafspdgawlasGsdDgtvriW 37 ++++t GH++ v+s+ f p+g++l+s+s+D+t+++W sp|C3XVT5|LIS1_BRAFL 181 ENIKTMHGHDHnVSSVHFMPNGDFLISASRDKTIKMW 217 6889999**556************************* PP == domain 4 score: 34.6 bits; conditional E-value: 3.3e-10 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 c++t+tGH +v+ +++++dg++las+s D+tvr+W sp|C3XVT5|LIS1_BRAFL 223 YCVKTFTGHrEWVRTVRVNQDGSLLASCSNDQTVRVW 259 69*******999************************* PP == domain 5 score: 22.6 bits; conditional E-value: 2e-06 EEEEEEESSSS.EEEEEEETTSSE..................EEEEETTSEEEEEE CS WD40 2 qclrtltGHss.vtslafspdgaw..................lasGsdDgtvriWd 38 +c +l+ H + v ++a+ p++ l+sGs+D+t+++Wd sp|C3XVT5|LIS1_BRAFL 265 ECKAELREHEHvVECIAWAPESCNghvsevmgaekkgrsgpfLLSGSRDKTIKMWD 320 68889999977569999666666677777777777777777699***********9 PP == domain 6 score: 39.4 bits; conditional E-value: 1e-11 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g c+ tl GH ++v+++ ++p g++++s+sdD+t+r+Wd sp|C3XVT5|LIS1_BRAFL 324 GVCIMTLVGHdNWVRGVVWHPGGKYIISASDDKTIRVWD 362 5799******999*************************9 PP == domain 7 score: 31.8 bits; conditional E-value: 2.5e-09 EEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGHss.vtslafspdgawlasGsdDgtvriW 37 +c++tl++H++ ts++f+++ +++++Gs D+tv++W sp|C3XVT5|LIS1_BRAFL 367 RCQKTLEAHQHfCTSIDFHRSAPYVITGSVDQTVKVW 403 79*******5559************************ PP >> tr|C3ZDR4|C3ZDR4_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_201703 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.2 0.0 2.9e-06 0.0003 4 38 .] 53 90 .. 50 90 .. 0.91 2 ? 9.8 0.3 0.023 2.4 7 37 .. 100 135 .. 94 136 .. 0.72 3 ? 4.4 0.0 1.2 1.3e+02 13 37 .. 202 225 .. 185 226 .. 0.73 4 ! 14.5 0.0 0.00077 0.08 4 38 .] 231 264 .. 228 264 .. 0.77 5 ! 22.2 0.0 2.8e-06 0.00029 8 38 .] 326 358 .. 315 358 .. 0.87 6 ? 10.0 0.0 0.021 2.2 14 36 .. 375 397 .. 366 399 .. 0.92 7 ? 9.0 0.0 0.042 4.4 13 38 .] 416 441 .. 405 441 .. 0.86 8 ? 6.1 0.0 0.34 35 12 31 .. 457 475 .. 446 481 .. 0.74 9 ? 1.5 0.0 9.9 1e+03 12 36 .. 526 550 .. 519 550 .. 0.85 10 ! 11.8 0.4 0.0055 0.58 4 37 .. 562 597 .. 559 597 .. 0.83 11 ! 11.0 0.1 0.0095 0.99 7 38 .] 726 760 .. 720 760 .. 0.84 12 ! 21.2 0.1 5.9e-06 0.00061 4 38 .] 767 805 .. 764 805 .. 0.78 13 ! 11.5 0.0 0.0065 0.68 2 38 .] 897 933 .. 896 933 .. 0.81 14 ! 20.5 0.5 9.5e-06 0.00099 5 38 .] 1000 1035 .. 994 1035 .. 0.83 15 ? 7.2 0.0 0.16 17 15 32 .. 1055 1072 .. 1048 1077 .. 0.87 16 ! 14.5 0.0 0.00075 0.078 10 34 .. 1091 1117 .. 1086 1121 .. 0.84 17 ? 3.0 0.0 3.3 3.4e+02 4 25 .. 1128 1150 .. 1125 1157 .. 0.81 18 ? 8.7 0.1 0.051 5.3 13 38 .] 1206 1231 .. 1198 1231 .. 0.80 19 ! 18.5 0.4 4.1e-05 0.0043 5 37 .. 1246 1280 .. 1243 1281 .. 0.87 Alignments for each domain: == domain 1 score: 22.2 bits; conditional E-value: 2.9e-06 EEEEESS.SSEEEEEEETTSSEEEEE..ETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasG..sdDgtvriWd 38 ++++ GH +++ sla +p+++++a+G ++D+ +++Wd tr|C3ZDR4|C3ZDR4_BRAFL 53 QKVFFGHsDDIVSLAIHPEKQLVATGqvGKDPYIYVWD 90 67888**66699**************999********9 PP == domain 2 score: 9.8 bits; conditional E-value: 0.023 EE..SS.SSEEEEEEETTSSEEEEEET..TSEEEEE CS WD40 7 lt..GH.ssvtslafspdgawlasGsd..DgtvriW 37 l+ GH +++sl f++dg+ l+s ++ + v +W tr|C3ZDR4|C3ZDR4_BRAFL 100 LKggGHtHGISSLGFDRDGKHLVSVGMdnYNQVNVW 135 444499445*************97554247777777 PP == domain 3 score: 4.4 bits; conditional E-value: 1.2 EEEEEEETTSSEEEEEETTSEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriW 37 + +a +dg + sG+ g+++iW tr|C3ZDR4|C3ZDR4_BRAFL 202 ILTVAPFKDGLTF-SGTVSGHIMIW 225 5567788888886.8********** PP == domain 4 score: 14.5 bits; conditional E-value: 0.00077 EEEEESS.SSEEEEEEETTSSE....EEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgaw....lasGsdDgtvriWd 38 rt +GH + s+ + la++s+Dgt+++Wd tr|C3ZDR4|C3ZDR4_BRAFL 231 ERTVEGHgAAIISM------YLgadgLATASRDGTIKLWD 264 68889996556677......44666699***********9 PP == domain 5 score: 22.2 bits; conditional E-value: 2.8e-06 ESS.SS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ss.vtslafspdgawlasGsdDgtvriWd 38 +GH + ++la++p +++a++sdD+t+r+Wd tr|C3ZDR4|C3ZDR4_BRAFL 326 RGHaEGeMWGLATHPKRSLFATASDDKTIRVWD 358 79983359************************9 PP == domain 6 score: 10.0 bits; conditional E-value: 0.021 EEEEEETTSSEEEEEETTSEEEE CS WD40 14 tslafspdgawlasGsdDgtvri 36 +s+af++dg+ +a G +Dg+v+i tr|C3ZDR4|C3ZDR4_BRAFL 375 RSVAFNKDGSHVAVGFEDGSVMI 397 699******************98 PP == domain 7 score: 9.0 bits; conditional E-value: 0.042 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 +++l++sp+g la Gs D+ v i+d tr|C3ZDR4|C3ZDR4_BRAFL 416 IHDLKYSPNGERLAVGSNDNRVDIYD 441 79*****************9997776 PP == domain 8 score: 6.1 bits; conditional E-value: 0.34 S.EEEEEEETTSSEEEEEETT CS WD40 12 s.vtslafspdgawlasGsdD 31 s +t+l++s d++++++ D tr|C3ZDR4|C3ZDR4_BRAFL 457 SyITHLDWSTDSQYIVT-N-D 475 25************996.3.4 PP == domain 9 score: 1.5 bits; conditional E-value: 9.9 SEEEEEEETTSSEEEEEETTSEEEE CS WD40 12 svtslafspdgawlasGsdDgtvri 36 +v++ ++s +++a+G+d g v++ tr|C3ZDR4|C3ZDR4_BRAFL 526 DVNAADVSFQDKLIATGDDSGLVKL 550 5899999**********98888875 PP == domain 10 score: 11.8 bits; conditional E-value: 0.0055 EEEEESS.SSEEEEEEETTSSEEEE.EETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlas.GsdDgtvriW 37 +++ GH +vt ++f d++ l+s G+ D+ + W tr|C3ZDR4|C3ZDR4_BRAFL 562 FKKYGGHsAHVTNVRFTGDHKRLISiGGGDHAIFQW 597 67899**777************9866544****999 PP == domain 11 score: 11.0 bits; conditional E-value: 0.0095 EESS.SSEEEEEEETTSSEEEEE..ETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasG..sdDgtvriWd 38 + H +++ s+ +p ++ +a+G ++D+++++Wd tr|C3ZDR4|C3ZDR4_BRAFL 726 YLKHtDDIISMVKHPQNDIFATGqvGKDPSIHVWD 760 5568666779999999999****999********9 PP == domain 12 score: 21.2 bits; conditional E-value: 5.9e-06 EEEEESS..SSEEEEEEETTSSEEEEEE..TTSEEEEEE CS WD40 4 lrtltGH..ssvtslafspdgawlasGs..dDgtvriWd 38 l +l G+ +vt+l+fs dg +las + D+t+ +Wd tr|C3ZDR4|C3ZDR4_BRAFL 767 LISLQGQhqRGVTALDFSGDGELLASVGldNDHTIVLWD 805 55677664444*************9754326*******9 PP == domain 13 score: 11.5 bits; conditional E-value: 0.0065 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++l++ ++H ++ + ++ + g + +G++Dg++ W+ tr|C3ZDR4|C3ZDR4_BRAFL 897 KLLKEVEAHnGPLNTIKSFRQGVVV-TGGKDGSILQWN 933 67889999*6668888777777775.8**********8 PP == domain 14 score: 20.5 bits; conditional E-value: 9.5e-06 EEEESS..SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH..ssvtslafspdgawlasGsdDgtvriWd 38 ++ +H + v++l+++p +++ ++ sdD+t+r+Wd tr|C3ZDR4|C3ZDR4_BRAFL 1000 GHTGTHleNEVWGLDTHPKKHLCVTVSDDKTLRVWD 1035 3344566555*************999*********9 PP == domain 15 score: 7.2 bits; conditional E-value: 0.16 EEEEETTSSEEEEEETTS CS WD40 15 slafspdgawlasGsdDg 32 +afspdg+++a G+ Dg tr|C3ZDR4|C3ZDR4_BRAFL 1055 TCAFSPDGDLIAVGMNDG 1072 578***********9887 PP == domain 16 score: 14.5 bits; conditional E-value: 0.00075 S.SS.EEEEEEETTSSEEEEEETTSEE CS WD40 10 H.ss.vtslafspdgawlasGsdDgtv 34 H + +++l+fspdg+++a Gs D+ v tr|C3ZDR4|C3ZDR4_BRAFL 1091 HrKEkISDLKFSPDGKYIAVGSHDNFV 1117 765569***************999876 PP == domain 17 score: 3.0 bits; conditional E-value: 3.3 EEEEESS.SSEEEEEEETTSSEE CS WD40 4 lrtltGH.ssvtslafspdgawl 25 ++t++G s +t+l+++ +g++l tr|C3ZDR4|C3ZDR4_BRAFL 1128 TGTCRGSsSYITHLDWDVSGRLL 1150 6789999555*****99999886 PP == domain 18 score: 8.7 bits; conditional E-value: 0.051 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 v++ + s d+++la+G+d+g v++++ tr|C3ZDR4|C3ZDR4_BRAFL 1206 VNATCLSADKSLLATGDDNGFVKLFN 1231 533346*****************987 PP == domain 19 score: 18.5 bits; conditional E-value: 4.1e-05 EEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgawla.sGsdDgtvriW 37 +++ GH s+v +++ d ++l+ +G++D ++++W tr|C3ZDR4|C3ZDR4_BRAFL 1246 KKYVGHsSHVANVRWTYDDTYLVsAGGMDTSIMVW 1280 5688**888************9835689******* PP >> tr|C3YV64|C3YV64_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_205723 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 31.8 0.0 2.5e-09 2.7e-07 4 38 .] 9 44 .. 7 44 .. 0.94 2 ! 31.1 0.0 4.4e-09 4.6e-07 7 37 .. 54 85 .. 48 85 .. 0.89 3 ! 31.4 0.1 3.5e-09 3.7e-07 5 37 .. 94 127 .. 91 128 .. 0.92 4 ! 38.9 0.1 1.5e-11 1.6e-09 3 38 .] 134 170 .. 132 170 .. 0.94 5 ! 35.5 0.3 1.8e-10 1.8e-08 2 38 .] 175 212 .. 174 212 .. 0.92 6 ! 23.2 0.1 1.4e-06 0.00014 2 36 .. 217 252 .. 216 254 .. 0.92 7 ! 23.7 0.0 9.5e-07 9.9e-05 2 38 .] 259 296 .. 258 296 .. 0.91 Alignments for each domain: == domain 1 score: 31.8 bits; conditional E-value: 2.5e-09 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 r+++GH + vtsl+f+p+ + lasGs+D +++W+ tr|C3YV64|C3YV64_BRAFL 9 ERHFKGHrDTVTSLDFNPNMKQLASGSMDSCLMVWN 44 589****888*************************8 PP == domain 2 score: 31.1 bits; conditional E-value: 4.4e-09 EESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 7 ltGHss.vtslafspdgawlasGsdDgtvriW 37 + GH++ v s+ fsp+g+++as+s+D+tvr+W tr|C3YV64|C3YV64_BRAFL 54 FVGHKDaVMSVVFSPSGHLVASASRDKTVRLW 85 56**555************************* PP == domain 3 score: 31.4 bits; conditional E-value: 3.5e-09 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +++++H v+s++fspdg+ l+++sdD+++++W tr|C3YV64|C3YV64_BRAFL 94 TVFKAHtATVRSVDFSPDGQALLTASDDKSIKVW 127 5799**777************************* PP == domain 4 score: 38.9 bits; conditional E-value: 1.5e-11 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + +l H ++v++ +fspdg++++sGsdD+tv++Wd tr|C3YV64|C3YV64_BRAFL 134 FQFSLNQHmNWVRCARFSPDGRMIVSGSDDKTVKLWD 170 5778999*****************************9 PP == domain 5 score: 35.5 bits; conditional E-value: 1.8e-10 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +c++t+ H ++v+s+af+p+g+ +a+++ D tv++Wd tr|C3YV64|C3YV64_BRAFL 175 ECVHTFFEHgGFVNSVAFHPSGTCIAAAGTDSTVKVWD 212 7*****9**777*************98777*******9 PP == domain 6 score: 23.2 bits; conditional E-value: 1.4e-06 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvri 36 ++l+++ H v++l+f+++g++l+++s D t++i tr|C3YV64|C3YV64_BRAFL 217 RLLQHYQVHtAAVNGLSFHSSGNYLITASNDSTLKI 252 5799*****777***********************9 PP == domain 7 score: 23.7 bits; conditional E-value: 9.5e-07 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++ +tl GH ++ t +afs+ g+++asG+ D v++W+ tr|C3YV64|C3YV64_BRAFL 259 RLFYTLHGHqGPATTVAFSRAGDFFASGGSDEQVMVWK 296 67789****8889***************88*******6 PP >> tr|C3ZS55|C3ZS55_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_287844 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 27.1 0.0 8e-08 8.3e-06 4 38 .] 85 120 .. 82 120 .. 0.93 2 ! 29.7 0.0 1.2e-08 1.2e-06 1 38 [] 124 163 .. 124 163 .. 0.93 3 ! 35.0 0.1 2.5e-10 2.6e-08 1 38 [] 167 205 .. 167 205 .. 0.95 4 ! 20.4 0.2 1.1e-05 0.0011 1 38 [] 209 247 .. 209 247 .. 0.90 5 ! 29.6 0.8 1.3e-08 1.3e-06 2 38 .] 252 289 .. 251 289 .. 0.94 6 ! 25.0 0.0 3.8e-07 3.9e-05 1 38 [] 293 331 .. 293 331 .. 0.93 7 ! 29.4 0.0 1.5e-08 1.5e-06 2 38 .] 336 373 .. 335 373 .. 0.96 8 ! 13.6 0.0 0.0015 0.16 1 28 [. 377 405 .. 377 406 .] 0.91 Alignments for each domain: == domain 1 score: 27.1 bits; conditional E-value: 8e-08 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++l++H + t +af+++g+++++Gs+D+t+++Wd tr|C3ZS55|C3ZS55_BRAFL 85 FKVLRAHiLPLTNVAFNKSGSMFITGSYDRTCKVWD 120 57899**8889************************9 PP == domain 2 score: 29.7 bits; conditional E-value: 1.2e-08 TEEEEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtsla.fspdgawlasGsdDgtvriWd 38 g+ l+tl+GH + v+++a ++p+g+ +a+Gs D+t+++W+ tr|C3ZS55|C3ZS55_BRAFL 124 GEELHTLEGHrNVVYAIAfNNPYGDKIATGSFDKTCKLWS 163 5789******7769*************************5 PP == domain 3 score: 35.0 bits; conditional E-value: 2.5e-10 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+c +t++GH + + af+p ++ +a+Gs+D t +iWd tr|C3ZS55|C3ZS55_BRAFL 167 GKCYHTFRGHtAEIVCTAFNPQSTIVATGSMDTTAKIWD 205 79********76699***********************9 PP == domain 4 score: 20.4 bits; conditional E-value: 1.1e-05 TEEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 gq + tl GHs + sl+f+ g+ +++Gs D+tv Wd tr|C3ZS55|C3ZS55_BRAFL 209 GQEISTLMGHSAeIISLSFNTKGDQVITGSFDHTVTCWD 247 57889999**44588***********************9 PP == domain 5 score: 29.6 bits; conditional E-value: 1.3e-08 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + ++tl GH + ++s +f+ d +++a+Gs+D+t++iWd tr|C3ZS55|C3ZS55_BRAFL 252 SRIHTLIGHrGEISSAQFNWDCSLIATGSMDNTCKIWD 289 568******888*************************9 PP == domain 6 score: 25.0 bits; conditional E-value: 3.8e-07 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 gqc++tl+GH + v ++af+ g++la++s D t r+++ tr|C3ZS55|C3ZS55_BRAFL 293 GQCIGTLRGHeDEVLDVAFDYTGQLLATASADSTGRVYN 331 79********777*****************9**988886 PP == domain 7 score: 29.4 bits; conditional E-value: 1.5e-08 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 qcl +l+GH + ++ ++f+p g+ ++++s D++ r+Wd tr|C3ZS55|C3ZS55_BRAFL 336 QCLMKLEGHeGEISKVCFNPQGNKILTASADKSARLWD 373 8********888*************************9 PP == domain 8 score: 13.6 bits; conditional E-value: 0.0015 TEEEEEEESSSS.EEEEEEETTSSEEEEE CS WD40 1 gqclrtltGHss.vtslafspdgawlasG 28 g+c+++l GHs+ + s+af+ +g+ +++G tr|C3ZS55|C3ZS55_BRAFL 377 GKCQQILAGHSDeIFSCAFNYEGNTIITG 405 79********556*************998 PP >> tr|Q8T776|Q8T776_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_281422 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 36.4 0.0 9.4e-11 9.8e-09 5 37 .. 58 91 .. 52 91 .. 0.91 2 ! 34.5 1.1 3.7e-10 3.9e-08 3 38 .] 98 134 .. 96 134 .. 0.91 3 ! 39.7 0.2 8.3e-12 8.7e-10 1 38 [] 138 176 .. 138 176 .. 0.96 4 ! 36.6 0.3 7.6e-11 8e-09 1 38 [] 180 218 .. 180 218 .. 0.95 5 ! 25.1 0.0 3.4e-07 3.6e-05 1 38 [] 222 261 .. 222 261 .. 0.92 6 ! 24.6 0.1 4.8e-07 5e-05 1 38 [] 265 306 .. 265 306 .. 0.79 7 ! 18.3 0.0 4.6e-05 0.0048 3 37 .. 312 349 .. 310 350 .. 0.84 Alignments for each domain: == domain 1 score: 36.4 bits; conditional E-value: 9.4e-11 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriW 37 tl GH + v+s++fsp+g wlas+s D+ ++iW tr|Q8T776|Q8T776_BRAFL 58 FTLAGHtKAVSSVKFSPNGEWLASSSADKLIKIW 91 5778**999************************* PP == domain 2 score: 34.5 bits; conditional E-value: 3.7e-10 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +t++GH +++++a+s+d+++l+s+sdD+t++iWd tr|Q8T776|Q8T776_BRAFL 98 FEKTISGHkLGISDVAWSSDSHLLVSASDDKTLKIWD 134 568999**766*************************9 PP == domain 3 score: 39.7 bits; conditional E-value: 8.3e-12 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+cl+tl+GH + v ++ f+p +++++sGs D +vriWd tr|Q8T776|Q8T776_BRAFL 138 GKCLKTLKGHsNYVFCCNFNPQSNLIVSGSFDESVRIWD 176 79********777*************************9 PP == domain 4 score: 36.6 bits; conditional E-value: 7.6e-11 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+cl+tl +H ++v+++ f++dg++++s+s+Dg +riWd tr|Q8T776|Q8T776_BRAFL 180 GKCLKTLPAHsDPVSAVHFNRDGSLIVSSSYDGLCRIWD 218 79********666*************************9 PP == domain 5 score: 25.1 bits; conditional E-value: 3.4e-07 TEEEEEEESS.SS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ss.vtslafspdgawlasGsdDgtvriWd 38 gqcl+tl ++ v+ ++fsp+g+++++++ D+t+++Wd tr|Q8T776|Q8T776_BRAFL 222 GQCLKTLIDDdNPpVSFVKFSPNGKYILAATLDNTLKLWD 261 7999**99776678**************9999*******9 PP == domain 6 score: 24.6 bits; conditional E-value: 4.8e-07 TEEEEEEESS.SS...EEEEE...EETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ss...vtsla...fspdgawlasGsdDgtvriWd 38 g+cl+t+tGH + + g+w++sGs+D+ v iW+ tr|Q8T776|Q8T776_BRAFL 265 GKCLKTYTGHkNEkycI---FanfSVTGGKWIVSGSEDNMVFIWN 306 79********7666663...333355666***************8 PP == domain 7 score: 18.3 bits; conditional E-value: 4.6e-05 EEEEEESSSS.EEEEEEETTSSEEEEEE..TTSEEEEE CS WD40 3 clrtltGHss.vtslafspdgawlasGs..dDgtvriW 37 +++l GH++ v + a +p + +as+ D+t+++W tr|Q8T776|Q8T776_BRAFL 312 VVQKLQGHTDvVLCTACHPTENIIASAAleNDKTIKLW 349 57889***885699999*******9986445******* PP >> tr|C3XR37|C3XR37_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_120243 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 5.7 0.2 0.46 48 4 37 .. 54 92 .. 51 93 .. 0.82 2 ? 3.1 0.0 3.1 3.2e+02 12 38 .] 114 139 .. 103 139 .. 0.86 3 ? 10.1 0.0 0.018 1.9 21 38 .] 162 178 .. 141 178 .. 0.70 4 ! 19.1 0.0 2.6e-05 0.0027 8 38 .] 236 268 .. 230 268 .. 0.87 5 ? 5.6 0.0 0.48 50 13 32 .. 284 303 .. 275 305 .. 0.89 6 ? 9.2 0.0 0.036 3.7 13 34 .. 326 347 .. 313 350 .. 0.80 7 ! 20.1 0.7 1.2e-05 0.0013 3 37 .. 470 506 .. 468 507 .. 0.84 8 ! 18.3 0.2 4.8e-05 0.005 6 38 .] 631 666 .. 626 666 .. 0.89 9 ! 17.9 0.1 6.5e-05 0.0068 2 38 .] 671 711 .. 670 711 .. 0.84 10 ? 1.7 0.0 8.5 8.8e+02 15 37 .. 777 799 .. 763 800 .. 0.86 11 ? 9.3 0.1 0.033 3.4 2 38 .] 803 838 .. 802 838 .. 0.77 12 ! 18.3 0.2 4.8e-05 0.005 8 38 .] 903 935 .. 897 935 .. 0.87 13 ? 5.4 0.1 0.58 61 14 35 .. 953 974 .. 952 977 .. 0.88 14 ? 1.9 0.0 7.4 7.7e+02 4 25 .. 1027 1049 .. 1024 1056 .. 0.82 15 ? 5.3 0.5 0.61 63 3 31 .. 1092 1122 .. 1088 1125 .. 0.76 16 ! 17.4 0.4 9e-05 0.0094 4 37 .. 1140 1175 .. 1137 1175 .. 0.87 17 ? 6.7 0.0 0.22 22 9 37 .. 1374 1405 .. 1365 1406 .. 0.77 18 ! 25.8 0.6 2e-07 2.1e-05 7 38 .] 1598 1631 .. 1594 1631 .. 0.87 19 ? 3.3 0.0 2.6 2.7e+02 14 32 .. 1648 1666 .. 1642 1670 .. 0.88 20 ! 14.2 0.0 0.00094 0.098 13 34 .. 1689 1710 .. 1680 1714 .. 0.87 21 ! 17.1 0.2 0.00012 0.012 7 38 .] 1839 1872 .. 1834 1872 .. 0.84 Alignments for each domain: == domain 1 score: 5.7 bits; conditional E-value: 0.46 EEEEESSSS.....EEEEEEETTSSE.EEEEETTSEEEEE CS WD40 4 lrtltGHss.....vtslafspdgaw.lasGsdDgtvriW 37 +r + GHs+ + +++++p+++ l+s++ +++++W tr|C3XR37|C3XR37_BRAFL 54 QRFFLGHSDdiirkIFDIQWDPYNKNrLVSCG-VKHIKFW 92 67788**555988889**9*****99989999.7777777 PP == domain 2 score: 3.1 bits; conditional E-value: 3.1 SEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriWd 38 + +laf pd + +G +g v++W+ tr|C3XR37|C3XR37_BRAFL 114 TILCLAFAPDEVTF-TGVLNGDVYMWK 139 489**********7.7*88*******5 PP == domain 3 score: 10.1 bits; conditional E-value: 0.018 TSSEEEEEETTSEEEEEE CS WD40 21 dgawlasGsdDgtvriWd 38 d + asGs+Dg +++Wd tr|C3XR37|C3XR37_BRAFL 162 DEGY-ASGSRDGCIKLWD 178 6666.79**********9 PP == domain 4 score: 19.1 bits; conditional E-value: 2.6e-05 ESS.SS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ss.vtslafspdgawlasGsdDgtvriWd 38 GH + ++l +p ++++++GsdD++vr+W+ tr|C3XR37|C3XR37_BRAFL 236 QGHaEGeLWGLGIHPKQPLFVTGSDDHSVRLWS 268 599733599***********************5 PP == domain 5 score: 5.6 bits; conditional E-value: 0.48 EEEEEEETTSSEEEEEETTS CS WD40 13 vtslafspdgawlasGsdDg 32 v+slafs dg la G++Dg tr|C3XR37|C3XR37_BRAFL 284 VRSLAFSADGGHLAVGMKDG 303 99**************9998 PP == domain 6 score: 9.2 bits; conditional E-value: 0.036 EEEEEEETTSSEEEEEETTSEE CS WD40 13 vtslafspdgawlasGsdDgtv 34 v+ +++spdg++la Gs D+ v tr|C3XR37|C3XR37_BRAFL 326 VHEIRYSPDGNYLAVGSNDNFV 347 89999************99765 PP == domain 7 score: 20.1 bits; conditional E-value: 1.2e-05 EEEEEESS.SSEEEEEEETTSSEEEE.EETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlas.GsdDgtvriW 37 + r++tGH +vt ++fs+d++ +++ G+ D+++ W tr|C3XR37|C3XR37_BRAFL 470 KFRKYTGHsAHVTNVRFSHDNSRVVTvGGGDHSIFQW 506 6789****777************9854555******9 PP == domain 8 score: 18.3 bits; conditional E-value: 4.8e-05 EEESS.SSEEEEEEETTSSEEEEE..ETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasG..sdDgtvriWd 38 + H +++ +l+ +p ++++a+G ++D+ +++Wd tr|C3XR37|C3XR37_BRAFL 631 FYLEHtDDILCLCIHPLKDFVATGqvGRDPAIHVWD 666 45679788****************9999*******9 PP == domain 9 score: 17.9 bits; conditional E-value: 6.5e-05 EEEEEEE.SS.SSEEEEEEETTSSEEEEE..ETTSEEEEEE CS WD40 2 qclrtlt.GH.ssvtslafspdgawlasG..sdDgtvriWd 38 ++l +l+ GH ++++++fs dg+ las +d++++ +Wd tr|C3XR37|C3XR37_BRAFL 671 KPLSVLRgGHqRGICAVDFSGDGKKLASVglDDNHSIVMWD 711 67888877**766*************9752558*******9 PP == domain 10 score: 1.7 bits; conditional E-value: 8.5 EEEEETTSSEEEEEETTSEEEEE CS WD40 15 slafspdgawlasGsdDgtvriW 37 ++a+ + + ++sG+ +g v++W tr|C3XR37|C3XR37_BRAFL 777 CVAYGKTEDSVFSGGANGMVYMW 799 888888888899*********** PP == domain 11 score: 9.3 bits; conditional E-value: 0.033 EEEEEEESS.SSE...EEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssv...tslafspdgawlasGsdDgtvriWd 38 ++l+t ++H ++v ++l d+ + ++G++Dg v +Wd tr|C3XR37|C3XR37_BRAFL 803 NLLKTVKAHdGPVfamHAL----DKGF-VTGGKDGVVGLWD 838 578999***7778333566....6666.58**********9 PP == domain 12 score: 18.3 bits; conditional E-value: 4.8e-05 ESS..SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH..ssvtslafspdgawlasGsdDgtvriWd 38 GH + v++la +p+++ ++ sdD+t+r+Wd tr|C3XR37|C3XR37_BRAFL 903 QGHmeNEVWGLACHPHKDHCVTISDDKTLRVWD 935 6***888************886688*******9 PP == domain 13 score: 5.4 bits; conditional E-value: 0.58 EEEEEETTSSEEEEE.ETTSEEE CS WD40 14 tslafspdgawlasG.sdDgtvr 35 +++++spdg+ +a G s Dg+ tr|C3XR37|C3XR37_BRAFL 953 RCCCYSPDGKAIAVGlS-DGSFL 974 599************88.*9975 PP == domain 14 score: 1.9 bits; conditional E-value: 7.4 EEEEESS.SSEEEEEEETTSSEE CS WD40 4 lrtltGH.ssvtslafspdgawl 25 +++++G s +t++++++ g++l tr|C3XR37|C3XR37_BRAFL 1027 VGICKGAsSYITHIDWDRKGKLL 1049 6789999555********99986 PP == domain 15 score: 5.3 bits; conditional E-value: 0.61 EEEEEESSSS...EEEEEEETTSSEEEEEETT CS WD40 3 clrtltGHss...vtslafspdgawlasGsdD 31 c +++ Hs+ v+s + s+d++ la+G+ D tr|C3XR37|C3XR37_BRAFL 1092 CEGIWPVHSDvtdVNSACLSHDKRVLATGD-D 1122 6667778977344666669*******9997.6 PP == domain 16 score: 17.4 bits; conditional E-value: 9e-05 EEEEESS.SSEEEEEEETTSSEEEE.EETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlas.GsdDgtvriW 37 +++ GH +vt +++s+d ++l+s G+ D v +W tr|C3XR37|C3XR37_BRAFL 1140 FKKYIGHsAHVTNVRWSHDDRMLVSvGGADTAVLVW 1175 57899**777************9854789******* PP == domain 17 score: 6.7 bits; conditional E-value: 0.22 SS.SSEEEEEEETTSSEEEEEE..TTSEEEEE CS WD40 9 GH.ssvtslafspdgawlasGs..dDgtvriW 37 H ++v+ + fs g++l++++ d +++ +W tr|C3XR37|C3XR37_BRAFL 1374 FHsKGVCYVNFSATGKLLLTAGldDEHSIAVW 1405 57788*9**********997754489999999 PP == domain 18 score: 25.8 bits; conditional E-value: 2e-07 EESS.SS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ss.vtslafspdgawlasGsdDgtvriWd 38 GH + ++la +p+++++as+sdD+tvriWd tr|C3XR37|C3XR37_BRAFL 1598 VHGHcEGeLWGLAAHPSKQFFASASDDCTVRIWD 1631 56997336*************************9 PP == domain 19 score: 3.3 bits; conditional E-value: 2.6 EEEEEETTSSEEEEEETTS CS WD40 14 tslafspdgawlasGsdDg 32 +s+a+spdg +la G+++g tr|C3XR37|C3XR37_BRAFL 1648 RSVAYSPDGEMLAVGMKNG 1666 589**********998766 PP == domain 20 score: 14.2 bits; conditional E-value: 0.00094 EEEEEEETTSSEEEEEETTSEE CS WD40 13 vtslafspdgawlasGsdDgtv 34 v +++fspdg++la GsdD+ v tr|C3XR37|C3XR37_BRAFL 1689 VQDIRFSPDGKFLAVGSDDNCV 1710 78999************99987 PP == domain 21 score: 17.1 bits; conditional E-value: 0.00012 EESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 + GH +vt ++f ++ ++l+ +G+dD+ + +W+ tr|C3XR37|C3XR37_BRAFL 1839 YVGHsAHVTNVRFTSEDKYLIsAGGDDCCLFVWK 1872 789*777*****9999999873679********6 PP >> tr|C3XTK6|C3XTK6_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_114488 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.1 0.0 0.00023 0.024 2 37 .. 56 92 .. 55 93 .. 0.82 2 ! 19.9 0.3 1.5e-05 0.0015 6 38 .] 102 135 .. 97 135 .. 0.91 3 ! 21.3 0.2 5.4e-06 0.00056 4 38 .] 142 177 .. 139 177 .. 0.91 4 ! 20.9 0.1 7.3e-06 0.00076 2 38 .] 182 219 .. 181 219 .. 0.94 5 ! 14.0 0.0 0.0011 0.11 7 38 .] 403 434 .. 397 434 .. 0.93 6 ! 24.8 0.1 4.1e-07 4.3e-05 2 38 .] 479 516 .. 478 516 .. 0.92 7 ? 8.3 0.0 0.069 7.2 12 37 .. 545 570 .. 532 570 .. 0.82 8 ! 22.4 0.0 2.5e-06 0.00026 6 37 .. 580 612 .. 575 612 .. 0.91 9 ! 17.9 0.2 6.3e-05 0.0066 3 38 .] 619 655 .. 617 655 .. 0.88 10 ! 36.8 0.1 6.6e-11 6.9e-09 2 37 .. 660 696 .. 659 697 .. 0.91 Alignments for each domain: == domain 1 score: 16.1 bits; conditional E-value: 0.00023 EEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGHss.vtslafspdgawlasGsdDgtvriW 37 ++l +ltG ++ vt+la spd++ +a G Dgtv ++ tr|C3XTK6|C3XTK6_BRAFL 56 EKLLVLTGGKHeVTALAASPDNQHVAVGYSDGTVQVF 92 566777776556****************55****886 PP == domain 2 score: 19.9 bits; conditional E-value: 1.5e-05 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++GH + vt l+++++g l+sGs+D v +Wd tr|C3XTK6|C3XTK6_BRAFL 102 VFSGHkGAVTVLRYDHNGMRLVSGSKDTDVIVWD 135 69***655*************************9 PP == domain 3 score: 21.3 bits; conditional E-value: 5.4e-06 EEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 l+ l+GH++ +t+++f +d ++l+++s+D v+ Wd tr|C3XTK6|C3XTK6_BRAFL 142 LYRLKGHKGvITHCQFLKDRNFLITSSKDTFVKWWD 177 66799**9956************************9 PP == domain 4 score: 20.9 bits; conditional E-value: 7.3e-06 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 c +t GH + v+s+a+ d + l++Gs D+ +r+Wd tr|C3XTK6|C3XTK6_BRAFL 182 HCFKTMVGHrTEVWSFAVTADERRLITGSGDNELRVWD 219 5889999**999****************99*******9 PP == domain 5 score: 14.0 bits; conditional E-value: 0.0011 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 l GH s+v+ +afs+d+ +++G tv++W+ tr|C3XTK6|C3XTK6_BRAFL 403 LPGHrSDVRTVAFSSDNIAMVTGA-TETVKLWN 434 68**********************.*******8 PP == domain 6 score: 24.8 bits; conditional E-value: 4.1e-07 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++l++ ++H + v+s+a spd++ l+sG+ D+ v++Wd tr|C3XTK6|C3XTK6_BRAFL 479 SQLQSVDAHqGAVWSIALSPDKRGLVSGGADKLVKFWD 516 6789999**777*************************9 PP == domain 7 score: 8.3 bits; conditional E-value: 0.069 SEEEEEEETTSSEEEEEETTSEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriW 37 +v ++++spd+++la + D+tv+++ tr|C3XTK6|C3XTK6_BRAFL 545 DVLGVKYSPDHRLLAVALLDNTVKVF 570 4999***********9978*****95 PP == domain 8 score: 22.4 bits; conditional E-value: 2.5e-06 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriW 37 +l GH +v +++ s dg++l++Gs D+++++W tr|C3XTK6|C3XTK6_BRAFL 580 SLYGHkLPVLAMDISTDGTLLVTGSADRNIKLW 612 678**777************************* PP == domain 9 score: 17.9 bits; conditional E-value: 6.3e-05 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 c +++ +H +s+ +++f p ++++s+++Dg v+ Wd tr|C3XTK6|C3XTK6_BRAFL 619 CHKSIFAHdDSIMCVQFLPRTHMFFSAGKDGRVKQWD 655 5566669*777*************************9 PP == domain 10 score: 36.8 bits; conditional E-value: 6.6e-11 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 q++ tl+GH v+++a sp+g+++++Gs D+++r+W tr|C3XTK6|C3XTK6_BRAFL 660 QHILTLEGHqAEVWCMAISPNGDYVVTGSHDKSLRLW 696 6778899**777****************99******* PP >> tr|C3ZAD4|C3ZAD4_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_124973 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 18.8 0.0 3.2e-05 0.0034 6 37 .. 869 901 .. 863 902 .. 0.83 2 ! 24.0 0.0 7.4e-07 7.7e-05 3 38 .] 910 946 .. 908 946 .. 0.93 3 ! 34.5 0.0 3.7e-10 3.9e-08 1 38 [] 994 1032 .. 994 1032 .. 0.95 4 ! 14.4 0.3 0.00083 0.087 3 36 .. 1038 1071 .. 1036 1073 .. 0.85 5 ! 27.2 0.1 7.2e-08 7.5e-06 2 38 .] 1078 1114 .. 1077 1114 .. 0.92 6 ! 18.3 0.7 4.9e-05 0.0051 1 38 [] 1118 1156 .. 1118 1156 .. 0.93 7 ! 12.3 0.2 0.0037 0.38 5 38 .] 1250 1284 .. 1246 1284 .. 0.84 8 ! 20.2 0.0 1.2e-05 0.0012 7 38 .] 1379 1411 .. 1374 1411 .. 0.92 9 ! 24.4 0.1 5.7e-07 5.9e-05 12 38 .] 1426 1456 .. 1415 1456 .. 0.78 Alignments for each domain: == domain 1 score: 18.8 bits; conditional E-value: 3.2e-05 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriW 37 tl H ++ts+a pdg +++++ +D+t+ri+ tr|C3ZAD4|C3ZAD4_BRAFL 869 TLAHHrAGITSIAMTPDGGYMVTAARDCTIRIY 901 34445778****************9*******8 PP == domain 2 score: 24.0 bits; conditional E-value: 7.4e-07 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + rtltGH sv la p++ +l+sGs D+t+++W+ tr|C3ZAD4|C3ZAD4_BRAFL 910 LERTLTGHtASVEVLAAAPNNELLVSGSLDNTLKVWN 946 5799****888*99999*******************8 PP == domain 3 score: 34.5 bits; conditional E-value: 3.7e-10 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 gq++ tltGH + v++la+s+d++++++G +D+t+++W+ tr|C3ZAD4|C3ZAD4_BRAFL 994 GQLQFTLTGHeGAVSCLAVSHDNQYIITGAEDNTIKMWS 1032 6899******888*************************5 PP == domain 4 score: 14.4 bits; conditional E-value: 0.00083 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvri 36 + t++ H ++ t+l++ +dg+ + sGs+D t+ + tr|C3ZAD4|C3ZAD4_BRAFL 1038 LKNTFSHHtDHLTCLRVTQDGRIV-SGSKDTTLSV 1071 56789999777************7.8******987 PP == domain 5 score: 27.2 bits; conditional E-value: 7.2e-08 EEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 + ++ l+GHs+ v+sl +dg++ +sGs D+ v++Wd tr|C3ZAD4|C3ZAD4_BRAFL 1078 EVVHRLEGHSHpVYSLTITSDGRYAVSGS-DKVVKLWD 1114 67899****556*****************.*******9 PP == domain 6 score: 18.3 bits; conditional E-value: 4.9e-05 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+ +++l GH + v ++ + +d++ ++sG +D ++ +Wd tr|C3ZAD4|C3ZAD4_BRAFL 1118 GKEVHHLQGHyGIVDCVGVTSDNKVIVSGARDEHLNVWD 1156 6889******77789999********************9 PP == domain 7 score: 12.3 bits; conditional E-value: 0.0037 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 rt+t +s+t+l+ +d++ +++G++ g +++W+ tr|C3ZAD4|C3ZAD4_BRAFL 1250 RTITDKdGSITCLRITHDNNCVVTGDEAGYIKLWN 1284 565545456*************************8 PP == domain 8 score: 20.2 bits; conditional E-value: 1.2e-05 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 l GH s+ t+l++s+++++lasGs t r+Wd tr|C3ZAD4|C3ZAD4_BRAFL 1379 LVGHqSPLTCLSVSHNQKLLASGSSGETMRVWD 1411 56**999****************99*******9 PP == domain 9 score: 24.4 bits; conditional E-value: 5.7e-07 S....EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 s....vtslafspdgawlasGsdDgtvriWd 38 + + +l+fs+d ++l++G+ D+++++Wd tr|C3ZAD4|C3ZAD4_BRAFL 1426 PvfkgIVCLSFSHDDKYLLTGGHDRSLKMWD 1456 3444488**************99*******9 PP >> tr|C3XZW3|C3XZW3_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_84043 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 26.0 0.4 1.8e-07 1.9e-05 2 37 .. 893 929 .. 892 930 .. 0.91 2 ! 19.3 0.0 2.3e-05 0.0024 1 37 [. 934 971 .. 934 972 .. 0.92 3 ! 14.6 0.0 0.00071 0.074 2 37 .. 977 1013 .. 976 1013 .. 0.88 4 ? 2.5 0.0 4.6 4.8e+02 13 38 .] 1088 1113 .. 1078 1113 .. 0.87 5 ! 28.6 0.2 2.6e-08 2.7e-06 3 38 .] 1119 1155 .. 1117 1155 .. 0.95 6 ! 13.2 0.6 0.0019 0.2 11 38 .] 1171 1202 .. 1166 1202 .. 0.89 7 ! 32.9 0.2 1.2e-09 1.3e-07 3 38 .] 1208 1244 .. 1206 1244 .. 0.95 8 ? 5.9 0.0 0.4 42 16 37 .. 1303 1324 .. 1290 1325 .. 0.85 9 ! 16.5 0.5 0.00018 0.019 5 37 .. 1333 1365 .. 1329 1366 .. 0.87 10 ! 23.1 0.1 1.5e-06 0.00016 1 38 [] 1370 1408 .. 1370 1408 .. 0.91 11 ! 30.8 0.3 5.5e-09 5.8e-07 2 38 .] 1413 1450 .. 1412 1450 .. 0.91 Alignments for each domain: == domain 1 score: 26.0 bits; conditional E-value: 1.8e-07 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 + ++t++GH ++++++ s++g++++sGsdD+tv W tr|C3XZW3|C3XZW3_BRAFL 893 KAVQTFEGHkDNINCIYLSHSGKFFLSGSDDQTVQSW 929 6789*****555**********************988 PP == domain 2 score: 19.3 bits; conditional E-value: 2.3e-05 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 gq lrt++GH +v ++ ++ + +a+G +D+ vr++ tr|C3XZW3|C3XZW3_BRAFL 934 GQGLRTYSGHtAGVMCMTLAHNDQIFATGAKDHIVRVF 971 6789******888*****9999999***********97 PP == domain 3 score: 14.6 bits; conditional E-value: 0.00071 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +++++++ H +t++ ++ + l++++ D+ +++W tr|C3XZW3|C3XZW3_BRAFL 977 EPQQVIEQHtAAITCITLTRHDDILVTAGADCRIHVW 1013 6899999**777*****9999999998888******* PP == domain 4 score: 2.5 bits; conditional E-value: 4.6 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 vt++a d+ + a G+++g++ +++ tr|C3XZW3|C3XZW3_BRAFL 1088 VTCVAIANDSVFAALGCENGSILVFN 1113 9***********766999****9986 PP == domain 5 score: 28.6 bits; conditional E-value: 2.6e-08 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++tl GH +vt++a s+d ++++s+ +D tv++W+ tr|C3XZW3|C3XZW3_BRAFL 1119 LMHTLQGHqAPVTDVAISHDDHFILSAAEDDTVHVWN 1155 689*****888*************************8 PP == domain 6 score: 13.2 bits; conditional E-value: 0.0019 SSEEEEE...EETTSSEEE.EEETTSEEEEEE CS WD40 11 ssvtsla...fspdgawla.sGsdDgtvriWd 38 +svt++ + +dg+ +a sG++Dg++r+W+ tr|C3XZW3|C3XZW3_BRAFL 1171 KSVTCITvgtVERDGSSIAlSGGKDGSCRLWS 1202 46999999999999999977***********5 PP == domain 7 score: 32.9 bits; conditional E-value: 1.2e-09 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 l++l H + +t++a s++g++ +sGs+D t+++W+ tr|C3XZW3|C3XZW3_BRAFL 1208 MLHHLQDHvKAITCVALSSNGTFAVSGSEDTTIKVWS 1244 69**********************************5 PP == domain 8 score: 5.9 bits; conditional E-value: 0.4 EEEETTSSEEEEEETTSEEEEE CS WD40 16 lafspdgawlasGsdDgtvriW 37 +a+ pd++ +sG++D+ +iW tr|C3XZW3|C3XZW3_BRAFL 1303 VAVTPDNQNAVSGDRDNVMKIW 1324 45699****99*********** PP == domain 9 score: 16.5 bits; conditional E-value: 0.00018 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriW 37 ++++ H +s++++a s d+++ ++Gs D ++++W tr|C3XZW3|C3XZW3_BRAFL 1333 QSIK-HvDSISCIAISLDSQLCVTGSHDMSLKVW 1365 5554.9899****************99******* PP == domain 10 score: 23.1 bits; conditional E-value: 1.5e-06 TEEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 g+++++l GH++ vt++++ ++ ++sGs D+tv +W+ tr|C3XZW3|C3XZW3_BRAFL 1370 GKLTQILAGHDDvVTCVQVAEQKQRVVSGSVDKTVIVWN 1408 5788999***7767************************8 PP == domain 11 score: 30.8 bits; conditional E-value: 5.5e-09 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 q +tl+GH + vt+l d + ++sGsdDgt+r+W+ tr|C3XZW3|C3XZW3_BRAFL 1413 QIEQTLSGHtGTVTCLGLANDADTVISGSDDGTIRVWS 1450 66789****777*************************5 PP >> tr|C3ZDV4|C3ZDV4_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_65485 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 14.3 0.0 0.00087 0.091 11 38 .] 116 143 .. 106 143 .. 0.82 2 ! 26.9 0.1 9.1e-08 9.4e-06 7 38 .] 184 216 .. 181 216 .. 0.93 3 ! 26.2 0.1 1.6e-07 1.6e-05 3 37 .. 222 257 .. 220 257 .. 0.88 4 ! 45.6 0.1 1.1e-13 1.2e-11 2 38 .] 263 300 .. 262 300 .. 0.96 5 ! 39.3 0.1 1.1e-11 1.2e-09 1 38 [] 304 342 .. 304 342 .. 0.95 6 ! 36.3 0.0 9.7e-11 1e-08 2 38 .] 347 384 .. 346 384 .. 0.93 Alignments for each domain: == domain 1 score: 14.3 bits; conditional E-value: 0.00087 SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriWd 38 ++v+++ s d+++la+G +D +vr+W+ tr|C3ZDV4|C3ZDV4_BRAFL 116 QNVSAVGISEDSSLLAAGFEDSNVRVWS 143 45888889*******************5 PP == domain 2 score: 26.9 bits; conditional E-value: 9.1e-08 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 l GH ++v+s +fspd l+++s+Dgtvr+W+ tr|C3ZDV4|C3ZDV4_BRAFL 184 LHGHtGPVYSTSFSPDREQLLTSSEDGTVRLWS 216 67**888*************************5 PP == domain 3 score: 26.2 bits; conditional E-value: 1.6e-07 EEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGHss.vtslafspdgawlasGsdDgtvriW 37 +l +++GH+ v++++fsp g +++s++ D+ r+W tr|C3ZDV4|C3ZDV4_BRAFL 222 NLVVYKGHNYpVWDVQFSPTGYYFVSAGHDRVARLW 257 6789****556************998777******* PP == domain 4 score: 45.6 bits; conditional E-value: 1.1e-13 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 q++r + GH s+vt+++++p+++++a+Gs D+tvr+Wd tr|C3ZDV4|C3ZDV4_BRAFL 263 QPIRMFVGHySDVTCVQYHPNSNYVATGSSDRTVRLWD 300 899*************************99*******9 PP == domain 5 score: 39.3 bits; conditional E-value: 1.1e-11 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+c+r+ tGH v+ la+spdg++las++ D++v +Wd tr|C3ZDV4|C3ZDV4_BRAFL 304 GNCVRVMTGHkAAVHTLAWSPDGRYLASAGVDKNVLLWD 342 79********666*************************9 PP == domain 6 score: 36.3 bits; conditional E-value: 9.7e-11 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++l + +GH ++v+sl+fs++g++lasG+ D+tv++Wd tr|C3ZDV4|C3ZDV4_BRAFL 347 RLLAEMKGHtDPVYSLCFSREGSLLASGGIDNTVKVWD 384 678899***888*************************9 PP >> tr|C3ZEP1|C3ZEP1_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_57930 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 26.4 0.1 1.3e-07 1.4e-05 5 38 .] 149 183 .. 146 183 .. 0.91 2 ! 24.5 0.1 5.4e-07 5.6e-05 10 38 .] 210 238 .. 197 238 .. 0.84 3 ! 22.7 0.0 2e-06 0.0002 2 38 .] 242 279 .. 241 279 .. 0.93 4 ? 4.5 0.1 1.1 1.2e+02 7 36 .. 289 318 .. 283 319 .. 0.77 5 ! 40.4 0.1 4.9e-12 5.1e-10 2 38 .] 325 362 .. 324 362 .. 0.95 6 ! 24.9 0.0 3.8e-07 4e-05 2 38 .] 367 413 .. 366 413 .. 0.91 7 ! 41.3 0.2 2.7e-12 2.8e-10 1 38 [] 417 455 .. 417 455 .. 0.96 8 ! 13.1 0.2 0.0021 0.21 1 35 [. 459 493 .. 459 494 .. 0.92 Alignments for each domain: == domain 1 score: 26.4 bits; conditional E-value: 1.3e-07 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++l+GH s v +a++p +++lasGs D t riW+ tr|C3ZEP1|C3ZEP1_BRAFL 149 TVLRGHeSEVFICAWNPTSDMLASGSGDSTARIWN 183 579***88899889***********99*******8 PP == domain 2 score: 24.5 bits; conditional E-value: 5.4e-07 SSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 HssvtslafspdgawlasGsdDgtvriWd 38 ++vtsl+++++g++la+Gs+Dg riW+ tr|C3ZEP1|C3ZEP1_BRAFL 210 NKDVTSLDWNSEGTLLATGSYDGFARIWS 238 367*************************5 PP == domain 3 score: 22.7 bits; conditional E-value: 2e-06 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++++tl H +++ +l++++ g++l+s++ D+t iWd tr|C3ZEP1|C3ZEP1_BRAFL 242 RLVTTLGQHkGPIFALKWNKKGNYLLSAGVDKTTIIWD 279 67899*9**777***************999*******9 PP == domain 4 score: 4.5 bits; conditional E-value: 1.1 EESS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvri 36 + H + +++++++ ++ as+s D +++ tr|C3ZEP1|C3ZEP1_BRAFL 289 FPFHsAPALDVDWQSNTSF-ASCSTDMCIHV 318 566744456999*******.68888*99876 PP == domain 5 score: 40.4 bits; conditional E-value: 4.9e-12 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++++t+ GH + v++++++p+g++las+sdD t++iW+ tr|C3ZEP1|C3ZEP1_BRAFL 325 KPIKTFQGHsNEVNAIKWDPSGTLLASCSDDMTLKIWS 362 689******888*************************5 PP == domain 6 score: 24.9 bits; conditional E-value: 3.8e-07 EEEEEEESS.SSEEEEEEETTSSE.........EEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw.........lasGsdDgtvriWd 38 +c++ l +H + ++ +++sp g+ las+s D tvr+Wd tr|C3ZEP1|C3ZEP1_BRAFL 367 SCVHDLQAHtKEIYTIKWSPTGPGtnnpnaqlmLASASFDSTVRLWD 413 7********999*****9999999999999988899999*******9 PP == domain 7 score: 41.3 bits; conditional E-value: 2.7e-12 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g c++tlt H +v+s+afspdg++lasGs D+ v+iW+ tr|C3ZEP1|C3ZEP1_BRAFL 417 GVCIHTLTKHqEPVYSVAFSPDGKYLASGSFDKCVHIWN 455 57********888*************************8 PP == domain 8 score: 13.1 bits; conditional E-value: 0.0021 TEEEEEEESSSSEEEEEEETTSSEE.EEEETTSEEE CS WD40 1 gqclrtltGHssvtslafspdgawl.asGsdDgtvr 35 gq++++++G +++ +++++ g+ + as+s Dg+v tr|C3ZEP1|C3ZEP1_BRAFL 459 GQLVHSYRGTGGIFEVCWNSTGDRVgASAS-DGSVS 493 699*******99************988899.**995 PP >> tr|C3ZAE1|C3ZAE1_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_124992 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 19.5 0.0 1.9e-05 0.002 4 37 .. 1018 1053 .. 1015 1054 .. 0.83 2 ! 22.3 0.0 2.5e-06 0.00026 3 38 .] 1062 1098 .. 1060 1098 .. 0.90 3 ! 33.5 0.0 7.3e-10 7.6e-08 1 38 [] 1146 1184 .. 1146 1184 .. 0.94 4 ! 14.2 0.3 0.00093 0.097 3 36 .. 1190 1223 .. 1188 1225 .. 0.85 5 ! 26.4 0.1 1.3e-07 1.4e-05 2 38 .] 1230 1266 .. 1229 1266 .. 0.92 6 ! 18.1 0.7 5.4e-05 0.0057 1 38 [] 1270 1308 .. 1270 1308 .. 0.93 7 ! 11.1 0.2 0.0093 0.97 5 38 .] 1401 1435 .. 1397 1435 .. 0.84 8 ! 18.2 0.1 5.1e-05 0.0053 4 38 .] 1527 1562 .. 1524 1562 .. 0.91 9 ! 24.2 0.1 6.3e-07 6.6e-05 12 38 .] 1577 1607 .. 1566 1607 .. 0.78 Alignments for each domain: == domain 1 score: 19.5 bits; conditional E-value: 1.9e-05 EEEEESS..SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGH..ssvtslafspdgawlasGsdDgtvriW 37 lrt +H ++ts+a pdg +++++ +D+t+ri+ tr|C3ZAE1|C3ZAE1_BRAFL 1018 LRTTLAHhrAGITSIAMTPDGGYMVTAARDCTIRIY 1053 55644554777****************9*******8 PP == domain 2 score: 22.3 bits; conditional E-value: 2.5e-06 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + rtltGH + l+ p++ +l+sGs D+t+++W+ tr|C3ZAE1|C3ZAE1_BRAFL 1062 LERTLTGHtAAIEVLSAAPNNELLVSGSLDNTLKVWN 1098 5799****766988888*******************8 PP == domain 3 score: 33.5 bits; conditional E-value: 7.3e-10 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+++ tl+GH + v++la+s+d++++++G +D+t+++W+ tr|C3ZAE1|C3ZAE1_BRAFL 1146 GKLQFTLKGHeGAVSCLAVSHDNQFIITGAEDNTIKMWS 1184 68899*****888*************************5 PP == domain 4 score: 14.2 bits; conditional E-value: 0.00093 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvri 36 + t++ H ++ t+l++ +dg+ + sGs+D t+ + tr|C3ZAE1|C3ZAE1_BRAFL 1190 LKNTFSHHtDHLTCLRVTQDGRIV-SGSKDTTLSV 1223 56789999777************7.8******987 PP == domain 5 score: 26.4 bits; conditional E-value: 1.3e-07 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + ++ l+GH +v+sl +dg++ +sGs D+ v++Wd tr|C3ZAE1|C3ZAE1_BRAFL 1230 EVVHRLEGHaHPVYSLTITSDGRYAVSGS-DKVVKLWD 1266 67899****666*****************.*******9 PP == domain 6 score: 18.1 bits; conditional E-value: 5.4e-05 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+ +++l GH + v ++ + +d++ ++sG +D ++ +Wd tr|C3ZAE1|C3ZAE1_BRAFL 1270 GKEVHHLQGHyGIVDCVGVTSDNKVIVSGARDEHLNVWD 1308 6889******77789999********************9 PP == domain 7 score: 11.1 bits; conditional E-value: 0.0093 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 rt+t +s+t+l+ +d++ +++G++ g +++W+ tr|C3ZAE1|C3ZAE1_BRAFL 1401 RTITDKdGSITCLRITHDNNCVVTGDEAGFIKLWN 1435 555544456*************************8 PP == domain 8 score: 18.2 bits; conditional E-value: 5.1e-05 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++l H s+ t+l++s+++++lasGs t r+Wd tr|C3ZAE1|C3ZAE1_BRAFL 1527 SHILVRHqSPLTCLSVSHNQKLLASGSSGETMRVWD 1562 578888*889****************99*******9 PP == domain 9 score: 24.2 bits; conditional E-value: 6.3e-07 S....EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 s....vtslafspdgawlasGsdDgtvriWd 38 + + +l+fs+d ++l++G+ D+++++Wd tr|C3ZAE1|C3ZAE1_BRAFL 1577 PvfkgIVCLSFSHDDKYLLTGGHDRSLKMWD 1607 3444488**************99*******9 PP >> tr|C3ZNQ2|C3ZNQ2_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_90446 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.4 0.3 9.4e-05 0.0098 5 37 .. 6 37 .. 2 38 .. 0.80 2 ! 26.1 0.4 1.7e-07 1.7e-05 7 37 .. 50 81 .. 45 81 .. 0.89 3 ! 24.6 0.0 4.8e-07 5e-05 4 38 .] 89 125 .. 86 125 .. 0.84 4 ! 28.3 0.0 3.3e-08 3.4e-06 4 38 .] 132 167 .. 129 167 .. 0.92 5 ! 12.8 0.0 0.0026 0.27 4 38 .] 176 230 .. 173 230 .. 0.73 6 ! 27.2 0.0 7.2e-08 7.5e-06 7 38 .] 245 277 .. 240 277 .. 0.90 7 ! 34.1 0.0 5e-10 5.2e-08 2 37 .. 282 318 .. 281 319 .. 0.92 Alignments for each domain: == domain 1 score: 17.4 bits; conditional E-value: 9.4e-05 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +t+ H s+v+ +af +++ las+s D+tvr+W tr|C3ZNQ2|C3ZNQ2_BRAFL 6 HTIASHaSDVNWVAF--SSTVLASCSGDKTVRLW 37 778899888998844..6777999988******* PP == domain 2 score: 26.1 bits; conditional E-value: 1.7e-07 EESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 7 ltGHss.vtslafspdgawlasGsdDgtvriW 37 l GHs v++++fs+ g+ la++s Dgt+ +W tr|C3ZNQ2|C3ZNQ2_BRAFL 50 LLGHSYpVHCCCFSSFGTQLATCSTDGTINLW 81 559*446************************* PP == domain 3 score: 24.6 bits; conditional E-value: 4.8e-07 EEEEESS...SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH...ssvtslafspdgawlasGsdDgtvriWd 38 l+tl +H ++ + ++fspd++ l++Gs Dgt+ +Wd tr|C3ZNQ2|C3ZNQ2_BRAFL 89 LTTL-AHprnNGMRTVSFSPDSNVLVAGSVDGTLVLWD 125 5566.6877455999**********************9 PP == domain 4 score: 28.3 bits; conditional E-value: 3.3e-08 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 l ++++H +s++++af pdg++l+sGs+ g+ ++Wd tr|C3ZNQ2|C3ZNQ2_BRAFL 132 LSVIEAHdTSICACAFTPDGNFLLSGSMEGNMKLWD 167 667899*989*************************9 PP == domain 5 score: 12.8 bits; conditional E-value: 0.0026 EEEE.ESS.SSEEEEE.......EETTSSE................EEEEETTSEEEEEE CS WD40 4 lrtl.tGH.ssvtsla.......fspdgaw................lasGsdDgtvriWd 38 l+ l +GH +vt++ las++ D v++Wd tr|C3ZNQ2|C3ZNQ2_BRAFL 176 LYYLaEGHdLGVTCCVfsptfgsA-----NpdnpvpetqprmqyfmLASCGADMLVKLWD 230 5555359*555*999955555554.....05555599999999999999999*******9 PP == domain 6 score: 27.2 bits; conditional E-value: 7.2e-08 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 l GH v+++afspdg+ lasGs D+ +W+ tr|C3ZNQ2|C3ZNQ2_BRAFL 245 LQGHsATVNACAFSPDGKRLASGSVDRAAIVWN 277 78**555*************************8 PP == domain 7 score: 34.1 bits; conditional E-value: 5e-10 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 ++l+ ltGH +vt +afs dg +la+G++D+tvriW tr|C3ZNQ2|C3ZNQ2_BRAFL 282 EKLYMLTGHpRCVTTVAFSLDGMYLATGCMDRTVRIW 318 78899****766************************* PP >> tr|C3YIV0|C3YIV0_BRAFL Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog OS=Branchiostoma florid # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 26.8 0.0 9.6e-08 1e-05 3 37 .. 7 42 .. 5 42 .. 0.86 2 ! 24.1 2.1 6.9e-07 7.2e-05 3 38 .] 51 88 .. 49 88 .. 0.83 3 ! 39.9 0.1 7.3e-12 7.6e-10 2 37 .. 95 131 .. 94 132 .. 0.95 4 ! 19.4 0.1 2.1e-05 0.0022 3 37 .. 141 176 .. 139 177 .. 0.90 5 ! 36.6 0.5 7.9e-11 8.3e-09 1 37 [. 183 220 .. 183 221 .. 0.95 6 ! 11.6 0.7 0.0064 0.66 1 37 [. 245 283 .. 245 284 .. 0.86 7 ! 28.0 0.0 4.1e-08 4.3e-06 4 37 .. 297 337 .. 294 338 .. 0.77 Alignments for each domain: == domain 1 score: 26.8 bits; conditional E-value: 9.6e-08 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 + +l+GH + + +a++p g+ las++ D+t+r+W tr|C3YIV0|C3YIV0_BRAFL 7 EVAVLEGHqDRAWTVAWNPTGTVLASSGGDKTIRLW 42 57899***5559************96655******* PP == domain 2 score: 24.1 bits; conditional E-value: 6.9e-07 EEEEEE.SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtlt.GH.ssvtslafspdgawlasGsdDgtvriWd 38 c ++l+ H ++s+++sp g++lasGs D t iWd tr|C3YIV0|C3YIV0_BRAFL 51 CKTVLEdSHtRTIRSVCWSPCGTYLASGSFDATTCIWD 88 555664478444*************************9 PP == domain 3 score: 39.9 bits; conditional E-value: 7.3e-12 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +c tl+GH + v ++a+sp+g+++a++s+D++v iW tr|C3YIV0|C3YIV0_BRAFL 95 ECSATLEGHeNEVKCVAWSPSGQLIATCSRDKSVWIW 131 7999*****999************************* PP == domain 4 score: 19.4 bits; conditional E-value: 2.1e-05 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 c +l+ H ++v ++ ++p++ las+s+D t++++ tr|C3YIV0|C3YIV0_BRAFL 141 CASVLSLHtQDVKHVTWHPHKEILASASYDDTIKLY 176 67788889889***********************98 PP == domain 5 score: 36.6 bits; conditional E-value: 7.9e-11 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 ++cl t +GH s v++++f+++g las+s+D+t++iW tr|C3YIV0|C3YIV0_BRAFL 183 WDCLATMEGHdSTVWGVCFDQSGERLASCSEDKTLKIW 220 68********777************************* PP == domain 6 score: 11.6 bits; conditional E-value: 0.0064 TEEEEEEESS.SS.EEEEEEETTSSEEEEE.ETTSEEEEE CS WD40 1 gqclrtltGH.ss.vtslafspdgawlasG.sdDgtvriW 37 ++c+ tl+G + v+++++++ ++a++ + D +r++ tr|C3YIV0|C3YIV0_BRAFL 245 WKCVCTLSGYhKRtVYDVKWCHQTGLIATAaG-DDCIRVF 283 699*****997668****99999999*98736.9999996 PP == domain 7 score: 28.0 bits; conditional E-value: 4.1e-08 EEEEE.....SS.SSEEEEEEETTSSEE.EEEETTSEEEEE CS WD40 4 lrtlt.....GH.ssvtslafspdgawl.asGsdDgtvriW 37 + +lt +H ++v+++a++p + l as+sdDg v+iW tr|C3YIV0|C3YIV0_BRAFL 297 QFSLTataeqAHsQDVNCVAWNPKEPGLlASCSDDGVVKIW 337 555554455589888****9999999962699********* PP >> tr|C3YLC5|C3YLC5_BRAFL Katanin p80 WD40 repeat-containing subunit B1 OS=Branchiostoma floridae OX=7739 GN=KATNB1 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.1 0.0 0.00012 0.012 3 37 .. 9 45 .. 7 45 .. 0.91 2 ! 26.8 0.0 1e-07 1e-05 2 38 .] 51 88 .. 50 88 .. 0.95 3 ! 41.7 0.0 2e-12 2.1e-10 3 38 .] 94 130 .. 92 130 .. 0.94 4 ! 43.5 0.2 5e-13 5.2e-11 3 38 .] 136 172 .. 134 172 .. 0.94 5 ! 31.6 0.0 3e-09 3.1e-07 2 38 .] 177 214 .. 176 214 .. 0.93 6 ? 9.7 0.0 0.025 2.6 8 33 .. 224 250 .. 218 255 .. 0.74 Alignments for each domain: == domain 1 score: 17.1 bits; conditional E-value: 0.00012 EEEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtsla.fspdgawlasGsdDgtvriW 37 +l+++ +H s+v++la ++g+ +++G++D++v +W tr|C3YLC5|C3YLC5_BRAFL 9 KLQEFVAHgSNVNCLAlGYKSGRVMVTGGEDKKVNMW 45 688999**888****9999999999************ PP == domain 2 score: 26.8 bits; conditional E-value: 1e-07 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +c+ +l+GH s+v +++f ++++Gs g+++iWd tr|C3YLC5|C3YLC5_BRAFL 51 NCIMSLSGHtSPVECVRFGNAEELVVAGSQSGSLKIWD 88 79*******999****99999999*************9 PP == domain 3 score: 41.7 bits; conditional E-value: 2e-12 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +rtltGH s+++sl+f+p+g ++asGs+D ++++Wd tr|C3YLC5|C3YLC5_BRAFL 94 IVRTLTGHkSNIRSLDFHPYGEFVASGSMDTNIKLWD 130 689*****777*************************9 PP == domain 4 score: 43.5 bits; conditional E-value: 5e-13 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 c+ t++GH + v++++fspdg+w+as+++D ++++Wd tr|C3YLC5|C3YLC5_BRAFL 136 CIFTYKGHtDAVNCIRFSPDGRWIASAGEDSSLKMWD 172 999*****666*************************9 PP == domain 5 score: 31.6 bits; conditional E-value: 3e-09 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + +++++ H ++vt++ f+p+ +lasGs D+tv++Wd tr|C3YLC5|C3YLC5_BRAFL 177 KMIQEFKDHtGPVTGVEFHPNEFLLASGSADRTVKFWD 214 66889****888*************************9 PP == domain 6 score: 9.7 bits; conditional E-value: 0.025 ESS.SS.EEEEEEETTSSEEEEEETTSE CS WD40 8 tGH.ss.vtslafspdgawlasGsdDgt 33 tG s+ ++++ f+pdg+ l+ Gs tr|C3YLC5|C3YLC5_BRAFL 224 TGAeSGaIRCIFFHPDGKCLFGGS-QDA 250 4554446**************778.555 PP >> tr|C3Y8A7|C3Y8A7_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_276603 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 29.0 0.0 1.9e-08 2e-06 4 38 .] 49 84 .. 46 84 .. 0.91 2 ! 17.5 0.0 8.8e-05 0.0091 5 38 .] 93 127 .. 89 127 .. 0.86 3 ! 27.2 0.1 7.1e-08 7.4e-06 4 38 .] 134 170 .. 131 170 .. 0.86 4 ! 16.7 0.2 0.00015 0.016 12 38 .] 183 211 .. 174 211 .. 0.87 5 ! 34.5 0.1 3.7e-10 3.8e-08 4 38 .] 218 253 .. 215 253 .. 0.92 6 ! 22.8 0.1 1.9e-06 0.0002 2 38 .] 262 303 .. 261 303 .. 0.86 7 ! 19.8 0.0 1.6e-05 0.0017 3 36 .. 309 343 .. 307 343 .. 0.88 Alignments for each domain: == domain 1 score: 29.0 bits; conditional E-value: 1.9e-08 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + l+GH + +++ +f+p+g++lasGs D+++ +W+ tr|C3Y8A7|C3Y8A7_BRAFL 49 IMLLSGHeGEIYAAKFHPEGNLLASGSFDRNIFLWN 84 56689**888*************************8 PP == domain 2 score: 17.5 bits; conditional E-value: 8.8e-05 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +l GH + + l+fs dg+ l+s+s D+tv ++d tr|C3Y8A7|C3Y8A7_BRAFL 93 AVLNGHsGAIMELQFSTDGSTLFSASTDKTVGLFD 127 6799**555****************99***98776 PP == domain 3 score: 27.2 bits; conditional E-value: 7.1e-08 EEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 ++ l+GH ++v+s+ s+ g+ ++sGsdD t+r+Wd tr|C3Y8A7|C3Y8A7_BRAFL 134 IKRLKGHsTFVNSCHPSRRGPQmVVSGSDDSTIRLWD 170 56799**777****999999994569**********9 PP == domain 4 score: 16.7 bits; conditional E-value: 0.00015 S..EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 s..vtslafspdgawlasGsdDgtvriWd 38 vts++f++ ++ ++sG+ D+ ++ Wd tr|C3Y8A7|C3Y8A7_BRAFL 183 TyqVTSVSFNDTSDQILSGGIDNDIKCWD 211 135*************************9 PP == domain 5 score: 34.5 bits; conditional E-value: 3.7e-10 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++ +GH + vt+l+ s+dg++l+s+ +D+tvriWd tr|C3Y8A7|C3Y8A7_BRAFL 218 IYKMRGHmDTVTGLSLSKDGSYLLSCAMDNTVRIWD 253 56779**999****************99*******9 PP == domain 6 score: 22.8 bits; conditional E-value: 1.9e-06 EEEEEEESS..SS....EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH..ss....vtslafspdgawlasGsdDgtvriWd 38 +c++++ G s+ + + +spdg+ +++Gs D+ v++Wd tr|C3Y8A7|C3Y8A7_BRAFL 262 RCVKIFQGNqhSFeknlI-RCNWSPDGSKITAGSADRFVYVWD 303 799999988533388977.888********************9 PP == domain 7 score: 19.8 bits; conditional E-value: 1.6e-05 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvri 36 l++l GH +s++ ++f+p+ + ++s+s D+++++ tr|C3Y8A7|C3Y8A7_BRAFL 309 ILYKLPGHdGSINEVDFHPYEPIVLSASSDKKIYL 343 578899**888*************99987**9975 PP >> tr|C3XW77|C3XW77_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_63751 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 26.8 0.4 9.6e-08 1e-05 5 38 .] 335 368 .. 331 368 .. 0.85 2 ! 23.5 0.6 1.1e-06 0.00012 1 38 [] 372 408 .. 372 408 .. 0.83 3 ! 28.4 0.6 3.1e-08 3.2e-06 1 38 [] 412 448 .. 412 448 .. 0.85 4 ! 22.9 0.0 1.7e-06 0.00018 1 38 [] 452 488 .. 452 488 .. 0.93 5 ! 32.4 0.3 1.7e-09 1.7e-07 2 38 .] 493 528 .. 492 528 .. 0.95 6 ! 19.7 0.2 1.8e-05 0.0019 1 38 [] 532 568 .. 532 568 .. 0.76 7 ! 31.7 0.1 2.7e-09 2.8e-07 1 38 [] 572 611 .. 572 611 .. 0.88 Alignments for each domain: == domain 1 score: 26.8 bits; conditional E-value: 9.6e-08 EEEESS.SS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ss.vtslafspdgawlasGsdDgtvriWd 38 ++l+GH ++ +t+l + +g+ ++sGsdD+t+++W+ tr|C3XW77|C3XW77_BRAFL 335 KVLKGHdDHvITCL--QFEGHRVVSGSDDNTLKVWS 368 6899**66677***..668888*************5 PP == domain 2 score: 23.5 bits; conditional E-value: 1.1e-06 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+cl+tl GH ++v++ + + ++sGs D+t+++W+ tr|C3XW77|C3XW77_BRAFL 372 GKCLKTLVGHtGGVWCS--QMKYNIVISGSTDRTLKVWN 408 79********888*877..34445589***********8 PP == domain 3 score: 28.4 bits; conditional E-value: 3.1e-08 TEEEEEEESS.SSEEEEEEETTSSE....EEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgaw....lasGsdDgtvriWd 38 gqc++tl GH s v+++ ++ ++sGs+D t+riWd tr|C3XW77|C3XW77_BRAFL 412 GQCIHTLYGHtSTVRCM------HLhenqVVSGSRDATLRIWD 448 79********777****......44444478***********9 PP == domain 4 score: 22.9 bits; conditional E-value: 1.7e-06 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g c+++l GH v+++ + dg+ ++sG +D v++W+ tr|C3XW77|C3XW77_BRAFL 452 GACQHVLMGHvAAVRCV--QYDGRRVVSGAYDYMVKVWN 488 57********999****..889999****99*******8 PP == domain 5 score: 32.4 bits; conditional E-value: 1.7e-09 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +cl+tl GH + v+sl + dg+ ++sGs D ++r+Wd tr|C3XW77|C3XW77_BRAFL 493 ECLHTLQGHtNRVYSL--QFDGTHIVSGSLDTSIRVWD 528 8********999****..88*****************9 PP == domain 6 score: 19.7 bits; conditional E-value: 1.8e-05 TEEEEEEESSSSEE.EEEEETTSSE....EEEEETTSEEEEEE CS WD40 1 gqclrtltGHssvt.slafspdgaw....lasGsdDgtvriWd 38 g+cl+tl GH+s t ++ + l+sG D tv+iWd tr|C3XW77|C3XW77_BRAFL 532 GNCLHTLIGHQSLTsGM------ELrdniLVSGNADSTVKIWD 568 79********8874444......333333889*88*******9 PP == domain 7 score: 31.7 bits; conditional E-value: 2.7e-09 TEEEEEEESS.SS...EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ss...vtslafspdgawlasGsdDgtvriWd 38 gqcl+tl G ++ vt+l + ++++++++sdDgtv+iWd tr|C3XW77|C3XW77_BRAFL 572 GQCLQTLQGPnKHqsaVTCL--QFNKKFVITSSDDGTVKIWD 611 79*****977655667****..8899***************9 PP >> tr|C3ZSP8|C3ZSP8_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_274913 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.7 0.6 0.00015 0.016 3 38 .] 262 298 .. 259 298 .. 0.75 2 ! 31.7 0.0 2.8e-09 2.9e-07 1 38 [] 333 371 .. 333 371 .. 0.94 3 ! 24.9 0.2 3.8e-07 4e-05 6 37 .. 380 412 .. 375 412 .. 0.91 4 ! 37.5 0.2 4e-11 4.2e-09 3 38 .] 419 455 .. 418 455 .. 0.94 5 ! 33.9 0.2 5.5e-10 5.7e-08 4 38 .] 462 500 .. 459 500 .. 0.83 6 ! 30.1 0.0 9.2e-09 9.6e-07 2 38 .] 505 542 .. 504 542 .. 0.89 Alignments for each domain: == domain 1 score: 16.7 bits; conditional E-value: 0.00015 EEEEEESS...SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH...ssvtslafspdgawlasGsdDgtvriWd 38 cl+t H ++ + a+s+d+++++ G dD tv++W+ tr|C3ZSP8|C3ZSP8_BRAFL 262 CLYT--FHntfQGLNTAAVSDDSRFVCGGFDDSTVKVWS 298 5555..453244499999*******965569*******5 PP == domain 2 score: 31.7 bits; conditional E-value: 2.8e-09 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 gq +++ +GH ++v++ +f p++++l+++s+D tvr+W+ tr|C3ZSP8|C3ZSP8_BRAFL 333 GQEVKHMRGHsGPVYGTSFLPNNTFLLTSSEDTTVRLWN 371 6899******777*************************8 PP == domain 3 score: 24.9 bits; conditional E-value: 3.8e-07 EEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 6 tltGHss.vtslafspdgawlasGsdDgtvriW 37 +++GHs v+++++sp ga+++s+s D++ r+W tr|C3ZSP8|C3ZSP8_BRAFL 380 IYKGHSYpVWDIDTSPLGAYFVSCSQDRSARLW 412 799**446************************* PP == domain 4 score: 37.5 bits; conditional E-value: 4e-11 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +lr++ GH ++v +++f+p+ +++a+Gs D+tvr+W+ tr|C3ZSP8|C3ZSP8_BRAFL 419 PLRIFAGHsQDVDCVKFHPNCNYIATGSSDRTVRLWS 455 689*****888****************99*******5 PP == domain 5 score: 33.9 bits; conditional E-value: 5.5e-10 EEEEE...SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtlt...GH.ssvtslafspdgawlasGsdDgtvriWd 38 +r++ GH + + slafspdg+ las+++D+ vr+Wd tr|C3ZSP8|C3ZSP8_BRAFL 462 VRIFHgkdGHkGTIFSLAFSPDGKHLASAGEDNCVRVWD 500 6666444599555*************************9 PP == domain 6 score: 30.1 bits; conditional E-value: 9.2e-09 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + l++l++H +s++s+++s+dg++las++ D vr+Wd tr|C3ZSP8|C3ZSP8_BRAFL 505 DMLKELRAHtDSIYSISYSRDGTMLASAGGDSIVRVWD 542 56899****888*************97655*******9 PP >> tr|C3XQF5|C3XQF5_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_84515 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 23.6 0.1 1e-06 0.00011 4 38 .] 4 40 .. 1 40 [. 0.93 2 ! 29.8 3.1 1.1e-08 1.2e-06 6 38 .] 54 87 .. 49 87 .. 0.89 3 ! 35.2 0.1 2.2e-10 2.3e-08 4 38 .] 94 129 .. 91 129 .. 0.93 4 ! 22.2 0.4 2.9e-06 0.0003 8 38 .] 141 174 .. 132 174 .. 0.80 5 ! 22.5 0.1 2.2e-06 0.00023 7 38 .] 184 216 .. 178 216 .. 0.89 6 ! 26.6 0.1 1.2e-07 1.2e-05 1 38 [] 220 256 .. 220 256 .. 0.93 7 ! 16.7 0.0 0.00015 0.016 13 37 .. 283 306 .. 273 307 .. 0.90 Alignments for each domain: == domain 1 score: 23.6 bits; conditional E-value: 1e-06 EEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtsla.fspdgawlasGsdDgtvriWd 38 +tl+GH ++vt +a +++++++++s+s+D+++ +W+ tr|C3XQF5|C3XQF5_BRAFL 4 RGTLKGHgNWVTQIAtTPQNSDMILSASRDHSIIVWK 40 5799***999**************************6 PP == domain 2 score: 29.8 bits; conditional E-value: 1.1e-08 EEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGHss.vtslafspdgawlasGsdDgtvriWd 38 l GHs+ v+++ s+dg++ +sGs+D+t+r+Wd tr|C3XQF5|C3XQF5_BRAFL 54 CLNGHSHfVSDVVISSDGQFALSGSWDHTLRLWD 87 478**667************99***********9 PP == domain 3 score: 35.2 bits; conditional E-value: 2.2e-10 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +r + GH ++v s+afs d++ ++sGs+D+t+++W+ tr|C3XQF5|C3XQF5_BRAFL 94 TRRFVGHtKDVLSVAFSADNRQIVSGSRDKTIKLWN 129 67799******************************8 PP == domain 4 score: 22.2 bits; conditional E-value: 2.9e-06 ESS.SSEEEEEEETTSSE..EEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgaw..lasGsdDgtvriWd 38 +GH + ++++fsp+++ ++s+++D+ v++W+ tr|C3XQF5|C3XQF5_BRAFL 141 DGHtEWTSCVRFSPNNQNpiIVSCGWDKLVKVWN 174 49954458999********989***********8 PP == domain 5 score: 22.5 bits; conditional E-value: 2.2e-06 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 GH + +++ +spdg++ asG++D + ++Wd tr|C3XQF5|C3XQF5_BRAFL 184 HIGHmGYLNAVTVSPDGSLCASGGKDSNAMLWD 216 3499999*************************9 PP == domain 6 score: 26.6 bits; conditional E-value: 1.2e-07 TEEEEEEESSSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGHssvtslafspdgawlasGsdDgtvriWd 38 g++l+tl+G + +++l+fsp+ wl++++ +t++iWd tr|C3XQF5|C3XQF5_BRAFL 220 GKHLYTLDGTDEINALCFSPNRYWLCAAT-GPTIKIWD 256 67899*****77*************9889.*******9 PP == domain 7 score: 16.7 bits; conditional E-value: 0.00015 EEEEEEETTSSEEEEEETTSEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriW 37 + sla+s dg+ l++G D+ +r+W tr|C3XQF5|C3XQF5_BRAFL 283 I-SLAWSADGQTLFAGYTDNLIRVW 306 4.899***********88******* PP >> tr|C3YG76|C3YG76_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_126756 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 14.5 0.1 0.00076 0.079 3 38 .] 39 75 .. 37 75 .. 0.74 2 ! 25.2 0.4 3.1e-07 3.2e-05 3 38 .] 81 117 .. 79 117 .. 0.91 3 ! 21.8 1.5 3.8e-06 0.00039 10 37 .. 129 158 .. 122 159 .. 0.90 4 ! 23.2 0.4 1.3e-06 0.00014 2 38 .] 164 202 .. 163 202 .. 0.89 5 ! 25.7 0.3 2.2e-07 2.3e-05 6 38 .] 211 244 .. 206 244 .. 0.91 6 ! 29.9 0.2 1.1e-08 1.1e-06 8 38 .] 260 291 .. 253 291 .. 0.92 7 ! 38.1 1.2 2.6e-11 2.7e-09 2 38 .] 294 333 .. 293 333 .. 0.86 Alignments for each domain: == domain 1 score: 14.5 bits; conditional E-value: 0.00076 EEEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtsla.fspdgawlasGsdDgtvriWd 38 ++++ +GH ++v+ ++ ++d++ + + s D+t +iW+ tr|C3YG76|C3YG76_BRAFL 39 KVKVMRGHtDCVNRCKlCCQDQKIF-TVSNDKTAKIWN 75 57889***76699887444455655.6677*******8 PP == domain 2 score: 25.2 bits; conditional E-value: 3.1e-07 EEEEEESSSS..EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGHss..vtslafspdgawlasGsdDgtvriWd 38 l+t+ H + +ts ++spd++ ++++s+D+t+r+Wd tr|C3YG76|C3YG76_BRAFL 81 VLKTYNCH-DmyITSGDVSPDNTRFLTCSWDKTLRLWD 117 6899****.556**9999*******************9 PP == domain 3 score: 21.8 bits; conditional E-value: 3.8e-06 SSSE.EEEEEETTSSEEEEEET.TSEEEEE CS WD40 10 Hssv.tslafspdgawlasGsd.DgtvriW 37 H+++ t+++fs +g++++sGsd D++v +W tr|C3YG76|C3YG76_BRAFL 129 HDGIlTCCRFSNNGKMVVSGSDlDHSVSVW 158 76677***************988******* PP == domain 4 score: 23.2 bits; conditional E-value: 1.3e-06 EEEEEEE.SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtlt.GH.ssvtslafspdgawlasGsdDgtvriWd 38 ++l++l+ H s +ts++f p+ +++ s+D++ ++Wd tr|C3YG76|C3YG76_BRAFL 164 TLLHHLKdQHkSTITSCSFTPNDERICTTSMDKSTKLWD 202 6899998678555**************9999*******9 PP == domain 5 score: 25.7 bits; conditional E-value: 2.2e-07 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +l+GH + ++s++ +++ +wl+++s+D+t+ +Wd tr|C3YG76|C3YG76_BRAFL 211 KLEGHiNVISSCCMDRNERWLCTASWDKTLQVWD 244 589**8889************************9 PP == domain 6 score: 29.9 bits; conditional E-value: 1.1e-08 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 +GH +sv+++ f +dg++l+sGs+D+tv +Wd tr|C3YG76|C3YG76_BRAFL 260 KGHeGSVSCCNFTRDGTLLVSGSYDQTVTLWD 291 5**999*************************9 PP == domain 7 score: 38.1 bits; conditional E-value: 2.6e-11 EEEEEEE..SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtlt..GH.ssvtslafspdgawlasGsdDgtvriWd 38 +c+++l+ GH ++vt+++fs d++w++s+s+D+t r+W+ tr|C3YG76|C3YG76_BRAFL 294 TCMHKLSlkGHsDWVTDCSFSEDQKWVISCSKDKTMRLWN 333 577775444**666*************************8 PP >> tr|C3ZI02|C3ZI02_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_88790 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 30.7 0.2 5.6e-09 5.8e-07 3 38 .] 11 47 .. 10 47 .. 0.91 2 ! 30.4 0.0 7.3e-09 7.6e-07 4 37 .. 54 88 .. 51 89 .. 0.91 3 ! 27.3 1.5 6.8e-08 7.1e-06 1 38 [] 93 131 .. 93 131 .. 0.97 4 ! 29.0 1.6 1.9e-08 2e-06 3 37 .. 137 172 .. 135 172 .. 0.93 5 ! 28.4 0.1 3.2e-08 3.3e-06 3 38 .] 181 216 .. 179 216 .. 0.81 6 ! 15.1 0.0 0.0005 0.052 3 31 .. 222 251 .. 220 254 .. 0.88 Alignments for each domain: == domain 1 score: 30.7 bits; conditional E-value: 5.6e-09 EEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 +l++++GH++ v+++afspd +++G+dD+ vr+W+ tr|C3ZI02|C3ZI02_BRAFL 11 NLKEFSGHKDeVNCCAFSPDWEIMVTGCDDCLVRVWN 47 6899****556********9999*************8 PP == domain 2 score: 30.4 bits; conditional E-value: 7.3e-09 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 + +l+GH + v s+afs d++++a++s+D tvr+W tr|C3ZI02|C3ZI02_BRAFL 54 VCKLRGHqGAVKSCAFSNDSKMFATASYDTTVRVW 88 56799**777************************* PP == domain 3 score: 27.3 bits; conditional E-value: 6.8e-08 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+c+++l GH +sv + fspd + l+sGs+D++ +Wd tr|C3ZI02|C3ZI02_BRAFL 93 GDCIHVLQGHtKSVEMVVFSPDCTKLCSGSWDCSAIMWD 131 68*********99**9**********************9 PP == domain 4 score: 29.0 bits; conditional E-value: 1.9e-08 EEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGHss.vtslafspdgawlasGsdDgtvriW 37 lr+l+GHss v s++f+ + +a+Gs+D tvr+W tr|C3ZI02|C3ZI02_BRAFL 137 VLRILSGHSSlVQSCDFDYKDKHVATGSWDYTVRVW 172 689*****7789************************ PP == domain 5 score: 28.4 bits; conditional E-value: 3.2e-08 EEEEEESS.SSEEEEEEETTSSE.....EEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw.....lasGsdDgtvriWd 38 ++++l+GH s+v+++ + lasGs+D+tvr+W+ tr|C3ZI02|C3ZI02_BRAFL 181 KVKILRGHtSNVHAV------VFarlgfLASGSWDKTVRLWN 216 6899****8889999......444444479***********8 PP == domain 6 score: 15.1 bits; conditional E-value: 0.0005 EEEEEESS.SSEEEEEEETTSSEEEEEETT CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdD 31 +l +l+GH ++v +lafs d+ +las+ +D tr|C3ZI02|C3ZI02_BRAFL 222 LLFVLSGHtGWVKALAFSMDSLYLASAAED 251 6789****888**************99888 PP >> tr|C3ZN01|C3ZN01_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_83410 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 26.4 0.1 1.3e-07 1.4e-05 7 38 .] 173 203 .. 164 203 .. 0.91 2 ! 13.0 0.0 0.0022 0.23 1 37 [. 207 242 .. 207 243 .. 0.80 3 ! 26.9 0.2 8.9e-08 9.2e-06 1 38 [] 247 283 .. 247 283 .. 0.91 4 ! 26.2 1.8 1.5e-07 1.6e-05 1 38 [] 287 323 .. 287 323 .. 0.90 5 ! 21.0 0.1 6.8e-06 0.00071 3 38 .] 329 363 .. 327 363 .. 0.86 6 ! 24.7 0.0 4.6e-07 4.8e-05 1 38 [] 367 403 .. 367 403 .. 0.85 7 ! 20.2 0.0 1.2e-05 0.0013 1 38 [] 406 442 .. 406 442 .. 0.94 Alignments for each domain: == domain 1 score: 26.4 bits; conditional E-value: 1.3e-07 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 l+GH + v+++ + dg++l+sG+ D++vr+Wd tr|C3ZN01|C3ZN01_BRAFL 173 LRGHeGRVNCM--DCDGKLLVSGGGDNSVRLWD 203 79**777****..99********88*******9 PP == domain 2 score: 13.0 bits; conditional E-value: 0.0022 TEEEEEEESS.SSEEEEEEETTSSE....EEEEETTSEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgaw....lasGsdDgtvriW 37 g+c+ l+GH +svt++ + +++++ D +r++ tr|C3ZN01|C3ZN01_BRAFL 207 GKCINQLEGHtDSVTGI------ELrnniVVTSCADSVIRVF 242 699*******888****......556665666666*****97 PP == domain 3 score: 26.9 bits; conditional E-value: 8.9e-08 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+cl++ GH s+v +l + dga l+s+s D+tvr+W+ tr|C3ZN01|C3ZN01_BRAFL 247 GRCLKVMQGHtSGVEHL--CFDGANLVSASNDRTVRVWS 283 68********888*999..559****************5 PP == domain 4 score: 26.2 bits; conditional E-value: 1.5e-07 TEEEEEEESS.SSE..EEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssv..tslafspdgawlasGsdDgtvriWd 38 g+c++ ltGH +++ ++ +g++ +s+s+D+t+r+Wd tr|C3ZN01|C3ZN01_BRAFL 287 GKCIHNLTGHtDDIqlLCM----HGDLAVSSSWDQTLRLWD 323 79********7776548**....****99***********9 PP == domain 5 score: 21.0 bits; conditional E-value: 6.8e-06 EEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 cl++l GH v+++ + d + ++sG+ D v+iW+ tr|C3ZN01|C3ZN01_BRAFL 329 CLQILVGHAEvVYCC--QFDERRIVSGGADSFVKIWN 363 99******6657***..66777799***********8 PP == domain 6 score: 24.7 bits; conditional E-value: 4.6e-07 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+c++tl+GH + v++l + + +asG D vr+W+ tr|C3ZN01|C3ZN01_BRAFL 367 GECTKTLSGHtGEVYCL--KYNEDVIASGAADSIVRLWS 403 68********777****..44555599**99*******5 PP == domain 7 score: 20.2 bits; conditional E-value: 1.2e-05 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+cl++l+ H + v++l ++g+ l+sG+d ++v iW+ tr|C3ZN01|C3ZN01_BRAFL 406 GECLHELREHiGVVRCL--LQEGDRLISGGDQKKVVIWN 442 69********7769***..*******************8 PP >> tr|C3ZDG0|C3ZDG0_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_163746 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 8.1 0.0 0.081 8.5 4 33 .. 51 82 .. 48 85 .. 0.84 2 ? 1.8 0.0 8 8.3e+02 12 28 .. 293 309 .. 278 313 .. 0.83 3 ! 18.8 0.0 3.4e-05 0.0035 4 38 .] 329 366 .. 326 366 .. 0.83 4 ? 9.0 0.0 0.043 4.5 9 36 .. 378 406 .. 371 406 .. 0.85 5 ! 19.7 0.1 1.7e-05 0.0018 12 38 .] 422 453 .. 413 453 .. 0.78 6 ! 18.7 0.4 3.6e-05 0.0038 3 38 .] 572 609 .. 570 609 .. 0.88 7 ! 16.3 0.2 0.00021 0.022 4 37 .. 733 769 .. 730 770 .. 0.89 8 ! 12.9 0.0 0.0025 0.26 3 38 .] 776 815 .. 774 815 .. 0.80 9 ? 6.6 0.3 0.24 25 5 37 .. 910 941 .. 906 942 .. 0.66 10 ! 17.4 0.0 8.9e-05 0.0093 9 38 .] 1008 1043 .. 1002 1043 .. 0.82 11 ? 4.4 0.0 1.2 1.2e+02 14 28 .. 1060 1074 .. 1056 1082 .. 0.81 12 ! 12.0 0.0 0.0048 0.5 10 34 .. 1098 1124 .. 1090 1128 .. 0.77 13 ! 20.7 0.8 8.6e-06 0.0009 5 37 .. 1248 1282 .. 1244 1283 .. 0.86 Alignments for each domain: == domain 1 score: 8.1 bits; conditional E-value: 0.081 EEEEESS.SSEEEEEEETTSSEEEEE..ETTSE CS WD40 4 lrtltGH.ssvtslafspdgawlasG..sdDgt 33 +r + GH +++ sla +p+ +++a+G + Dg+ tr|C3ZDG0|C3ZDG0_BRAFL 51 QRFFMGHtDDIISLALHPERTLVATGqvG-DGS 82 67788**87788*************9887.886 PP == domain 2 score: 1.8 bits; conditional E-value: 8 SEEEEEEETTSSEEEEE CS WD40 12 svtslafspdgawlasG 28 sv+slafsp + ++ G tr|C3ZDG0|C3ZDG0_BRAFL 293 SVCSLAFSPTAKTILVG 309 39*********999877 PP == domain 3 score: 18.8 bits; conditional E-value: 3.4e-05 EEEE.ESS.SS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtl.tGH.ss.vtslafspdgawlasGsdDgtvriWd 38 +++l GH + ++l ++p+ + ++++++D+tvriW+ tr|C3ZDG0|C3ZDG0_BRAFL 329 VHELvQGHgAGeLRALTVHPSEPSFLTSGEDHTVRIWS 366 667525**7336************999999*******5 PP == domain 4 score: 9.0 bits; conditional E-value: 0.043 SS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvri 36 H + v + afspdg+ +a G++Dg++ i tr|C3ZDG0|C3ZDG0_BRAFL 378 VHdGTVMAAAFSPDGSHIALGMKDGKIEI 406 5855599**********988******986 PP == domain 5 score: 19.7 bits; conditional E-value: 1.7e-05 S.....EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 s.....vtslafspdgawlasGsdDgtvriWd 38 + ++++++spdg++la++s Dg v ++d tr|C3ZDG0|C3ZDG0_BRAFL 422 DtlgqaICDVKYSPDGRYLAAASHDGRVSVFD 453 234445**************9999*****998 PP == domain 6 score: 18.7 bits; conditional E-value: 3.6e-05 EEEEEESS.SSEEEEEEETTSSEEEE.EETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlas.GsdDgtvriWd 38 + r++ GH ++vt ++fs dg+ ++s G+ D tv W+ tr|C3ZDG0|C3ZDG0_BRAFL 572 KFRKYGGHaDHVTNVRFSCDGSRVVSiGGADSTVFQWK 609 57899***888************9855888*******5 PP == domain 7 score: 16.3 bits; conditional E-value: 0.00021 EEEEESS.SSEEEEEEETTSSEEEEE..ETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasG..sdDgtvriW 37 +r + H +++ +l+ +p + +a+G ++D+t+++W tr|C3ZDG0|C3ZDG0_BRAFL 733 QRFYLQHtDDILCLSKHPTDDIFATGqvGKDPTIHVW 769 5566789888****************999******** PP == domain 8 score: 12.9 bits; conditional E-value: 0.0025 EEEEEESS..SSEEEEEEETTSSEEEEE..ETTSEEEEEE CS WD40 3 clrtltGH..ssvtslafspdgawlasG..sdDgtvriWd 38 +l +l G+ +v+ l+f g+ las +dD+++ iWd tr|C3ZDG0|C3ZDG0_BRAFL 776 NLAVLQGQhaRGVCELDFTAAGTRLASVglDDDHSIVIWD 815 677888774444*************9752558*******9 PP == domain 9 score: 6.6 bits; conditional E-value: 0.24 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriW 37 rt +H ++ s+++ dg+ ++++++Dg v +W tr|C3ZDG0|C3ZDG0_BRAFL 910 RTVQAHsGPCFSVKV--DGHDILTAGKDGVVCVW 941 778899544555544..4444447888******* PP == domain 10 score: 17.4 bits; conditional E-value: 8.9e-05 SS..SS....EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH..ss....vtslafspdgawlasGsdDgtvriWd 38 GH ++ ++la +p ++ +a+ sdD+t+r+Wd tr|C3ZDG0|C3ZDG0_BRAFL 1008 GHmgKHreneLWGLASHPTKHIMATVSDDKTLRLWD 1043 44433344559************************9 PP == domain 11 score: 4.4 bits; conditional E-value: 1.2 EEEEEETTSSEEEEE CS WD40 14 tslafspdgawlasG 28 ++ +fspdg++la G tr|C3ZDG0|C3ZDG0_BRAFL 1060 RCADFSPDGKLLAVG 1074 5889********988 PP == domain 12 score: 12.0 bits; conditional E-value: 0.0048 S.SS.EEEEEEETTSSEEEEEETTSEE CS WD40 10 H.ss.vtslafspdgawlasGsdDgtv 34 H + +++++fspdg++la +s ++v tr|C3ZDG0|C3ZDG0_BRAFL 1098 HrKEkISDVRFSPDGKYLAVASHENHV 1124 56557*************977767776 PP == domain 13 score: 20.7 bits; conditional E-value: 8.6e-06 EEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgawla.sGsdDgtvriW 37 +++ GH s+vt +++++d + l+ +G++D ++++W tr|C3ZDG0|C3ZDG0_BRAFL 1248 KKYLGHsSHVTNVRWCHDDTRLVsTGGMDTSIMVW 1282 6788**888*****99999998748999******* PP >> tr|C3ZYS2|C3ZYS2_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_123279 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 7.7 0.0 0.11 11 4 33 .. 303 334 .. 300 337 .. 0.84 2 ? 2.5 0.0 4.6 4.8e+02 12 28 .. 573 589 .. 558 593 .. 0.80 3 ! 20.1 0.0 1.3e-05 0.0013 4 38 .] 609 646 .. 606 646 .. 0.84 4 ? 8.6 0.0 0.057 5.9 9 36 .. 658 686 .. 651 686 .. 0.85 5 ! 19.3 0.1 2.3e-05 0.0024 12 38 .] 702 733 .. 693 733 .. 0.78 6 ! 19.6 0.3 1.9e-05 0.0019 2 38 .] 851 889 .. 850 889 .. 0.89 7 ! 12.6 0.2 0.0031 0.32 4 37 .. 1013 1049 .. 1010 1050 .. 0.89 8 ! 12.5 0.0 0.0033 0.35 3 38 .] 1056 1095 .. 1054 1095 .. 0.80 9 ? 3.0 0.0 3.2 3.3e+02 3 22 .. 1101 1121 .. 1099 1126 .. 0.85 10 ? 6.2 0.3 0.32 34 5 37 .. 1190 1221 .. 1186 1222 .. 0.66 11 ! 17.0 0.0 0.00012 0.012 9 38 .] 1288 1323 .. 1282 1323 .. 0.82 12 ? 4.0 0.0 1.6 1.6e+02 14 28 .. 1340 1354 .. 1336 1362 .. 0.81 13 ! 11.6 0.0 0.0064 0.67 10 34 .. 1378 1404 .. 1370 1408 .. 0.77 14 ! 20.3 0.7 1.2e-05 0.0012 5 37 .. 1528 1562 .. 1524 1563 .. 0.86 Alignments for each domain: == domain 1 score: 7.7 bits; conditional E-value: 0.11 EEEEESS.SSEEEEEEETTSSEEEEE..ETTSE CS WD40 4 lrtltGH.ssvtslafspdgawlasG..sdDgt 33 +r + GH +++ sla +p+ +++a+G + Dg+ tr|C3ZYS2|C3ZYS2_BRAFL 303 QRFFMGHtDDIISLALHPERTLVATGqvG-DGS 334 67788**87788*************9887.886 PP == domain 2 score: 2.5 bits; conditional E-value: 4.6 SEEEEEEETTSSEEEEE CS WD40 12 svtslafspdgawlasG 28 sv+slafsp+ + ++ G tr|C3ZYS2|C3ZYS2_BRAFL 573 SVCSLAFSPSAKTILVG 589 39**********99877 PP == domain 3 score: 20.1 bits; conditional E-value: 1.3e-05 EEEE.ESS.SS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtl.tGH.ss.vtslafspdgawlasGsdDgtvriWd 38 +++l GH + ++la++p+ + ++++++D+tvriW+ tr|C3ZYS2|C3ZYS2_BRAFL 609 VHELvQGHgAGeLRALAVHPSEPSFLTSGEDHTVRIWS 646 667525**7336*************99999*******5 PP == domain 4 score: 8.6 bits; conditional E-value: 0.057 SS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvri 36 H + v + afspdg+ +a G++Dg++ i tr|C3ZYS2|C3ZYS2_BRAFL 658 VHdGTVMAAAFSPDGSHIALGMKDGKIEI 686 5855599**********988******986 PP == domain 5 score: 19.3 bits; conditional E-value: 2.3e-05 S.....EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 s.....vtslafspdgawlasGsdDgtvriWd 38 + ++++++spdg++la++s Dg v ++d tr|C3ZYS2|C3ZYS2_BRAFL 702 DtlgqaICDVKYSPDGRYLAAASHDGRVSVFD 733 234445**************9999*****998 PP == domain 6 score: 19.6 bits; conditional E-value: 1.9e-05 EEEEEEESS.SSEEEEEEETTSSEEEE.EETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlas.GsdDgtvriWd 38 +lr++ GH ++vt ++fs dg+ ++s G+ D tv W+ tr|C3ZYS2|C3ZYS2_BRAFL 851 AKLRKYGGHaDHVTNVRFSCDGSRVVSiGGADSTVFQWK 889 5799*****888************9855888*******5 PP == domain 7 score: 12.6 bits; conditional E-value: 0.0031 EEEEESS.SSEEEEEEETTSSEEEEE..ETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasG..sdDgtvriW 37 +r + H +++ +l+ +p + +a+G ++D+ +++W tr|C3ZYS2|C3ZYS2_BRAFL 1013 QRFYLQHtDDILCLSKHPTDDIFATGqvGKDPAIHVW 1049 5566789888****************999******** PP == domain 8 score: 12.5 bits; conditional E-value: 0.0033 EEEEEESS..SSEEEEEEETTSSEEEEE..ETTSEEEEEE CS WD40 3 clrtltGH..ssvtslafspdgawlasG..sdDgtvriWd 38 +l +l G+ +v+ l+f g+ las +dD+++ iWd tr|C3ZYS2|C3ZYS2_BRAFL 1056 NLAVLQGQhaRGVCELDFTAAGTRLASVglDDDHSIVIWD 1095 677888774444*************9752558*******9 PP == domain 9 score: 3.0 bits; conditional E-value: 3.2 EEEEEESSSS.EEEEEEETTS CS WD40 3 clrtltGHss.vtslafspdg 22 +l t +GH++ + +++++p+ tr|C3ZYS2|C3ZYS2_BRAFL 1101 PLATTKGHKDkIFGVQWNPYD 1121 78899***666****999985 PP == domain 10 score: 6.2 bits; conditional E-value: 0.32 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriW 37 rt +H ++ s+++ dg+ ++++++Dg v +W tr|C3ZYS2|C3ZYS2_BRAFL 1190 RTVQAHsGPCFSVKV--DGHDILTAGKDGVVCVW 1221 778899544555544..4444447888******* PP == domain 11 score: 17.0 bits; conditional E-value: 0.00012 SS..SS....EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH..ss....vtslafspdgawlasGsdDgtvriWd 38 GH ++ ++la +p ++ +a+ sdD+t+r+Wd tr|C3ZYS2|C3ZYS2_BRAFL 1288 GHmgKHreneLWGLASHPTKHIMATVSDDKTLRLWD 1323 44433344559************************9 PP == domain 12 score: 4.0 bits; conditional E-value: 1.6 EEEEEETTSSEEEEE CS WD40 14 tslafspdgawlasG 28 ++ +fspdg++la G tr|C3ZYS2|C3ZYS2_BRAFL 1340 RCADFSPDGKLLAVG 1354 5889********988 PP == domain 13 score: 11.6 bits; conditional E-value: 0.0064 S.SS.EEEEEEETTSSEEEEEETTSEE CS WD40 10 H.ss.vtslafspdgawlasGsdDgtv 34 H + +++++fspdg++la +s ++v tr|C3ZYS2|C3ZYS2_BRAFL 1378 HrKEkISDVRFSPDGKYLAVASHENHV 1404 56557*************977767776 PP == domain 14 score: 20.3 bits; conditional E-value: 1.2e-05 EEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgawla.sGsdDgtvriW 37 +++ GH s+vt +++++d + l+ +G++D ++++W tr|C3ZYS2|C3ZYS2_BRAFL 1528 KKYLGHsSHVTNVRWCHDDTRLVtTGGMDTSIMVW 1562 6788**888*****99999998758999******* PP >> tr|C3ZSF0|C3ZSF0_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_220697 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.3 0.1 2.6e-06 0.00027 4 38 .] 49 84 .. 46 84 .. 0.94 2 ! 11.4 0.1 0.0074 0.78 12 37 .. 100 125 .. 87 126 .. 0.85 3 ! 18.8 0.1 3.3e-05 0.0034 4 38 .] 137 171 .. 134 171 .. 0.90 4 ! 22.8 0.1 1.8e-06 0.00019 1 38 [] 175 213 .. 175 213 .. 0.94 5 ! 33.5 0.0 7.3e-10 7.7e-08 2 38 .] 218 255 .. 217 255 .. 0.95 6 ! 23.3 0.1 1.3e-06 0.00013 9 38 .] 266 299 .. 260 299 .. 0.84 7 ! 20.9 0.3 7.4e-06 0.00077 5 38 .] 307 341 .] 303 341 .] 0.92 Alignments for each domain: == domain 1 score: 22.3 bits; conditional E-value: 2.6e-06 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 rtl+GH ++++ + +d++ l+s+s Dg++ +Wd tr|C3ZSF0|C3ZSF0_BRAFL 49 RRTLRGHlAKIYAMHWGSDSRNLVSASQDGKLIVWD 84 689****999*************************9 PP == domain 2 score: 11.4 bits; conditional E-value: 0.0074 SEEEEEEETTSSEEEEEETTSEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriW 37 +v +a+ p+g+++a+G+ D+ + i+ tr|C3ZSF0|C3ZSF0_BRAFL 100 WVMTCAYAPSGSYVACGGLDNICSIY 125 488889*****************998 PP == domain 3 score: 18.8 bits; conditional E-value: 3.3e-05 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 r+l GH + ++++f +d++ ++s++ D t+ +Wd tr|C3ZSF0|C3ZSF0_BRAFL 137 SRELPGHtGYLSCCRFLDDNQIVTSSG-DMTCALWD 171 57899**666*************9989.*******9 PP == domain 4 score: 22.8 bits; conditional E-value: 1.8e-06 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 gq+++++tGH ++v sl+ s d++ ++sG D + ++Wd tr|C3ZSF0|C3ZSF0_BRAFL 175 GQQMTSFTGHtGDVMSLSLSEDHRTFVSGACDASAKLWD 213 68899*****888****************77*******9 PP == domain 5 score: 33.5 bits; conditional E-value: 7.3e-10 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 c +t+tGH s+++++ f p+g+ +a+GsdD t+r++d tr|C3ZSF0|C3ZSF0_BRAFL 218 MCKQTFTGHeSDINAVTFFPNGNAFATGSDDATCRLFD 255 5999*****999************************98 PP == domain 6 score: 23.3 bits; conditional E-value: 1.3e-06 SS.SS...EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ss...vtslafspdgawlasGsdDgtvriWd 38 H + +ts+afs++g++l++G dD ++ +Wd tr|C3ZSF0|C3ZSF0_BRAFL 266 SHdNIicgITSVAFSKSGRLLLAGYDDFNCNVWD 299 574336669************************9 PP == domain 7 score: 20.9 bits; conditional E-value: 7.4e-06 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++l GH + v++l + +dg +a+Gs+D ++iW+ tr|C3ZSF0|C3ZSF0_BRAFL 307 GVLAGHdNRVSCLGVTDDGMAVATGSWDSFLKIWN 341 5788**888*************************8 PP >> tr|C3YCA1|C3YCA1_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_125119 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.9 0.2 1.7e-06 0.00017 3 38 .] 54 95 .. 52 95 .. 0.83 2 ! 16.2 0.0 0.00022 0.023 10 38 .] 108 139 .. 102 139 .. 0.83 3 ! 15.7 0.0 0.00031 0.032 13 37 .. 158 183 .. 148 184 .. 0.78 4 ? 5.9 0.0 0.41 43 12 34 .. 245 271 .. 233 273 .. 0.77 5 ? 5.3 0.0 0.62 64 9 37 .. 338 367 .. 330 368 .. 0.72 6 ? 2.8 0.0 3.7 3.9e+02 14 35 .. 385 406 .. 377 408 .. 0.82 7 ! 16.4 0.0 0.00019 0.02 8 38 .] 421 452 .. 413 452 .. 0.89 8 ! 15.2 0.0 0.00047 0.049 7 38 .] 464 496 .. 458 496 .. 0.79 9 ? 2.8 0.0 3.8 4e+02 14 37 .. 513 536 .. 504 537 .. 0.83 10 ! 27.6 0.1 5.7e-08 5.9e-06 1 38 [] 541 580 .. 541 580 .. 0.91 11 ! 13.7 0.3 0.0013 0.14 2 37 .. 585 621 .. 584 622 .. 0.86 Alignments for each domain: == domain 1 score: 22.9 bits; conditional E-value: 1.7e-06 EEEEEESS.SSEEEEEEETTSSEEEEE...ET..TSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasG...sd..DgtvriWd 38 ++ l+GH ++v++la+s++g++lasG ++ + v iWd tr|C3YCA1|C3YCA1_BRAFL 54 EQHFLSGHtNDVRCLAVSKSGRYLASGqvtHMgfKADVIIWD 95 68999***999**************98665224499999998 PP == domain 2 score: 16.2 bits; conditional E-value: 0.00022 S.SSEEEEEEETTSSEEEE.EE.TTSEEEEEE CS WD40 10 H.ssvtslafspdgawlas.Gs.dDgtvriWd 38 H v +lafsp+ ++l++ G+ dD +v +W+ tr|C3YCA1|C3YCA1_BRAFL 108 HkVKVEALAFSPNDKYLVTlGGqDDSSVVVWN 139 643499***********9876558*******8 PP == domain 3 score: 15.7 bits; conditional E-value: 0.00031 E.EEEEEETTSSEEE.EEETTSEEEEE CS WD40 13 v.tslafspdgawla.sGsdDgtvriW 37 + ++++f + + l+ +G+ Dgt+r+W tr|C3YCA1|C3YCA1_BRAFL 158 ItYCVKFANNDDNLFfTGG-DGTLRVW 183 75799977777776449**.******* PP == domain 4 score: 5.9 bits; conditional E-value: 0.41 S.....EEEEEEETTSSEEEEEETTSEE CS WD40 12 s.....vtslafspdgawlasGsdDgtv 34 + vt++a + g+ l+ G+ Dgtv tr|C3YCA1|C3YCA1_BRAFL 245 DkfslgVTAMALLKTGNILVGGG-DGTV 271 2456669************9777.***9 PP == domain 5 score: 5.3 bits; conditional E-value: 0.62 SS.SSEEEEEEETTSSEE.EEEETTSEEEEE CS WD40 9 GH.ssvtslafspdgawl.asGsdDgtvriW 37 H v ++ f+++ + l a++s + +r+W tr|C3YCA1|C3YCA1_BRAFL 338 CHfAAVQDIVFPRECSELfATCS-KDDIRVW 367 67555888876666666537999.******* PP == domain 6 score: 2.8 bits; conditional E-value: 3.7 EEEEEETTSSEEEEEET.TSEEE CS WD40 14 tslafspdgawlasGsd.Dgtvr 35 ++++f pdg+ ++s + Dg++r tr|C3YCA1|C3YCA1_BRAFL 385 HAIDFMPDGKSIVS-AWqDGKIR 406 5788*******995.65599998 PP == domain 7 score: 16.4 bits; conditional E-value: 0.00019 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++H ++vt++a g+ ++sG+ g vr+Wd tr|C3YCA1|C3YCA1_BRAFL 421 DAHpKGVTAIACTNGGRRIISGGGEGQVRVWD 452 58*999****************88*******9 PP == domain 8 score: 15.2 bits; conditional E-value: 0.00047 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + H svt++++ ++ +++s Dgt+ iWd tr|C3YCA1|C3YCA1_BRAFL 464 MKEHkASVTCIKVRKNDMECVTASSDGTCIIWD 496 5689777****87777777777766*******9 PP == domain 9 score: 2.8 bits; conditional E-value: 3.8 EEEEEETTSSEEEEEETTSEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriW 37 +++ ++pd +++++ D+++ W tr|C3YCA1|C3YCA1_BRAFL 513 RCVNYHPDEFQVITSGTDRKIGYW 536 69999999999987777**99777 PP == domain 10 score: 27.6 bits; conditional E-value: 5.7e-08 TEEEEEEESS.SS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ss.vtslafspdgawlasGsdDgtvriWd 38 g+++r+l+G s+ +++++ sp+g+++++G+dD+ +++W+ tr|C3YCA1|C3YCA1_BRAFL 541 GNQIRELDGSkSGaINGMDISPHGDFFVTGGDDKLIKVWK 580 578999****6448*************************6 PP == domain 11 score: 13.7 bits; conditional E-value: 0.0013 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 + +++ GH ++++ l+ spd++ ++s s Dg + W tr|C3YCA1|C3YCA1_BRAFL 585 EVTHVGIGHsGDISKLRISPDQRHIVSVSTDGAILRW 621 5678889**777**************9999**99766 PP >> tr|C3YRJ2|C3YRJ2_BRAFL Coatomer subunit beta' OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_75624 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 12.5 0.0 0.0032 0.33 11 38 .] 15 43 .. 6 43 .. 0.84 2 ! 11.5 0.0 0.0068 0.7 13 38 .] 60 85 .. 47 85 .. 0.76 3 ! 25.9 0.0 1.9e-07 2e-05 3 38 .] 91 127 .. 89 127 .. 0.93 4 ! 18.8 0.0 3.4e-05 0.0035 1 37 [. 132 170 .. 132 171 .. 0.86 5 ! 27.8 0.0 4.6e-08 4.8e-06 4 38 .] 178 215 .. 175 215 .. 0.90 6 ! 38.5 0.1 2e-11 2.1e-09 2 37 .. 220 256 .. 219 257 .. 0.96 7 ? 2.4 0.0 4.9 5.1e+02 16 32 .. 358 373 .. 349 377 .. 0.86 Alignments for each domain: == domain 1 score: 12.5 bits; conditional E-value: 0.0032 SS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 11 ss.vtslafspdgawlasGsdDgtvriWd 38 s+ v +++ +p +w++++ ++g+v++W+ tr|C3YRJ2|C3YRJ2_BRAFL 15 SDrVKCVDLHPTEPWMLAALYNGNVHVWN 43 34599***********99977*******8 PP == domain 2 score: 11.5 bits; conditional E-value: 0.0068 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 v++ +f p ++w+++G+dD vr+++ tr|C3YRJ2|C3YRJ2_BRAFL 60 VRASKFVPRKNWVVAGCDDMQVRVFN 85 5555699*****************97 PP == domain 3 score: 25.9 bits; conditional E-value: 1.9e-07 EEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 ++++++Hs+ v+s+a++p +++l+++sdD ++ Wd tr|C3YRJ2|C3YRJ2_BRAFL 91 RVHIFEAHSDyVRSIAVHPTQPYLLTSSDDMLIKCWD 127 589*****556*************************9 PP == domain 4 score: 18.8 bits; conditional E-value: 3.4e-05 TEEEEEEESSSS.EEEEE.EETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGHss.vtsla.fspdgawlasGsdDgtvriW 37 + c+++++GH++ v + +++d++ +as+s D+tv++W tr|C3YRJ2|C3YRJ2_BRAFL 132 WACIQVFEGHTHyVMQIViNPKDNNQFASASLDRTVKVW 170 579*******66797777688888889************ PP == domain 5 score: 27.8 bits; conditional E-value: 4.6e-08 EEEEESS.SSEEEEE..EETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtsla..fspdgawlasGsdDgtvriWd 38 tl+GH ++v++++ d+++l+sG dD+ v+iWd tr|C3YRJ2|C3YRJ2_BRAFL 178 NFTLEGHeKGVNCIDyyHGGDKPYLVSGADDRLVKIWD 215 5799***********888888888*************9 PP == domain 6 score: 38.5 bits; conditional E-value: 2e-11 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +c++tl+GH ++++s++f+pd + +++Gs+DgtvriW tr|C3YRJ2|C3YRJ2_BRAFL 220 TCVQTLEGHaQNISSVSFHPDLPIIITGSEDGTVRIW 256 69*******988************************* PP == domain 7 score: 2.4 bits; conditional E-value: 4.9 EEEETTSSEEEEEETTS CS WD40 16 lafspdgawlasGsdDg 32 ++ +p+g++++ ++ Dg tr|C3YRJ2|C3YRJ2_BRAFL 358 IQHNPNGRFVVVCG-DG 373 5689******9999.87 PP >> tr|C3YKY8|C3YKY8_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_248284 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 12.6 0.1 0.003 0.31 3 37 .. 328 363 .. 326 363 .. 0.89 2 ! 25.2 0.3 3.2e-07 3.3e-05 4 38 .] 371 406 .. 368 406 .. 0.86 3 ! 19.5 3.4 2e-05 0.002 2 38 .] 411 448 .. 410 448 .. 0.89 4 ! 30.6 0.1 6.1e-09 6.4e-07 2 38 .] 453 490 .. 452 490 .. 0.95 5 ! 17.2 0.2 0.00011 0.011 3 38 .] 496 532 .. 494 532 .. 0.92 6 ! 14.2 0.0 0.00096 0.1 14 37 .. 550 573 .. 537 574 .. 0.80 7 ! 32.1 0.1 2.1e-09 2.2e-07 4 38 .] 580 615 .] 578 615 .] 0.92 Alignments for each domain: == domain 1 score: 12.6 bits; conditional E-value: 0.003 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 ++ tl +H ++ la +p + l++ sdD+t ++W tr|C3YKY8|C3YKY8_BRAFL 328 LTNTLHAHqLAISNLALHPRKEILVTTSDDHTWKMW 363 56788999555************************* PP == domain 2 score: 25.2 bits; conditional E-value: 3.2e-07 EEEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 + t +GH ++v++ +f+p+g+ la +++ D tv++Wd tr|C3YKY8|C3YKY8_BRAFL 371 IMTGEGHeDWVSAADFHPSGTKLAtTAG-DSTVKVWD 406 67889**888*************94457.*******9 PP == domain 3 score: 19.5 bits; conditional E-value: 2e-05 EEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 +c+ t+ H++ +++a++ g++las+s+D+t ++Wd tr|C3YKY8|C3YKY8_BRAFL 411 ECTVTFAEHTHaAWDCAWHWTGDFLASCSMDNTSKVWD 448 57888988966469***********************9 PP == domain 4 score: 30.6 bits; conditional E-value: 6.1e-09 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +c +tl+GH +sv+s+ f +++ l++Gs D+t+ +Wd tr|C3YKY8|C3YKY8_BRAFL 453 RCRYTLRGHaDSVNSITFLYYSNTLCTGSADKTISLWD 490 7999*****988*************************9 PP == domain 5 score: 17.2 bits; conditional E-value: 0.00011 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 c +t+ GH sv+ + f+ g+ +as++ g +++Wd tr|C3YKY8|C3YKY8_BRAFL 496 CAQTFYGHmHSVNNVTFNLRGDTIASCDSYGVLKLWD 532 7789****999****************66*******9 PP == domain 6 score: 14.2 bits; conditional E-value: 0.00096 EEEEEETTSSEEEEEETTSEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriW 37 + +af+p+g+ la +s Dgtv+++ tr|C3YKY8|C3YKY8_BRAFL 550 NRVAFDPSGQVLAVASNDGTVKMF 573 5677*********9999*****86 PP == domain 7 score: 32.1 bits; conditional E-value: 2.1e-09 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + +ltGH + v ++ f++ g +l+sG+ DgtvriW+ tr|C3YKY8|C3YKY8_BRAFL 580 VSSLTGHeDAVQAVVFDRKGEYLVSGGSDGTVRIWS 615 6799***777****************88*******5 PP >> tr|C3YCB2|C3YCB2_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_88045 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 4.5 0.1 1.1 1.2e+02 12 38 .] 62 88 .. 27 88 .. 0.83 2 ! 17.4 0.3 9.3e-05 0.0097 2 37 .. 95 132 .. 94 133 .. 0.92 3 ? 7.6 0.1 0.11 12 3 38 .] 139 177 .. 137 177 .. 0.78 4 ! 22.4 0.2 2.4e-06 0.00025 2 38 .] 182 219 .. 181 219 .. 0.93 5 ? 5.5 0.0 0.52 54 23 38 .] 259 273 .. 239 273 .. 0.83 6 ! 23.2 0.0 1.3e-06 0.00014 6 37 .. 379 411 .. 375 412 .. 0.88 7 ? 9.6 0.4 0.028 2.9 3 37 .. 422 458 .. 420 458 .. 0.72 8 ! 34.8 0.6 2.9e-10 3e-08 4 38 .] 497 532 .. 494 532 .. 0.91 9 ! 22.4 0.1 2.4e-06 0.00025 2 37 .. 537 573 .. 536 574 .. 0.82 10 ? 9.0 0.1 0.041 4.3 2 38 .] 579 616 .. 578 616 .. 0.86 Alignments for each domain: == domain 1 score: 4.5 bits; conditional E-value: 1.1 SEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriWd 38 + +++ +spd + l+++++ +r Wd tr|C3YCB2|C3YCB2_BRAFL 62 DLSCFVVSPDDKHLVTAHRSLLLRQWD 88 367888************999999998 PP == domain 2 score: 17.4 bits; conditional E-value: 9.3e-05 EEEEEEE.SS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtlt.GH.ssvtslafspdgawlasGsdDgtvriW 37 +c+rt++ H s+v+ + f+ +++la+G+ D t+++W tr|C3YCB2|C3YCB2_BRAFL 95 KCVRTWKaIHiSPVSYMTFDTTSTLLATGGTDSTIKVW 132 6888887789999*99*************99******* PP == domain 3 score: 7.6 bits; conditional E-value: 0.11 EEEEEESSSS.EEEEEEETTSSE..EE.EEETTSEEEEEE CS WD40 3 clrtltGHss.vtslafspdgaw..la.sGsdDgtvriWd 38 c++ l+G ++ v+ +af+pd + + ++s D ++++Wd tr|C3YCB2|C3YCB2_BRAFL 139 CTHNLKGCQGvVSVVAFHPDMTKaqVYgAAS-DYKIHVWD 177 8899999977456677999999966664568.*******9 PP == domain 4 score: 22.4 bits; conditional E-value: 2.4e-06 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +c+ l+ H s vtsl+f +dg+ l+s+++D+ v +Wd tr|C3YCB2|C3YCB2_BRAFL 182 KCIALLDKHySTVTSLQFTQDGNTLLSSGRDNIVSMWD 219 68888899*999**************999********9 PP == domain 5 score: 5.5 bits; conditional E-value: 0.52 SEEEEEETTSEEEEEE CS WD40 23 awlasGsdDgtvriWd 38 +++++Gs +g +++W+ tr|C3YCB2|C3YCB2_BRAFL 259 HFVTAGS-KGVLKVWN 273 4577889.*******8 PP == domain 6 score: 23.2 bits; conditional E-value: 1.3e-06 EEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 6 tltGHss.vtslafspdgawlasGsdDgtvriW 37 +l GH++ v sl++ + g+++as+s+D+tvr+W tr|C3YCB2|C3YCB2_BRAFL 379 ILYGHTDiVLSLSVFKKGQLFASSSKDNTVRLW 411 567**7757************************ PP == domain 7 score: 9.6 bits; conditional E-value: 0.028 EEEEEESSSS....EEEEEEETTSSE....EEEEETTSEEEEE CS WD40 3 clrtltGHss....vtslafspdgaw....lasGsdDgtvriW 37 c+ tGH++ vt+ ++ +as s D t+++W tr|C3YCB2|C3YCB2_BRAFL 422 CVAMGTGHTHavsaVTCA------RLkpvfVASVSVDTTLKLW 458 666778995554557777......666665666699******* PP == domain 8 score: 34.8 bits; conditional E-value: 2.9e-10 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 l+tl+GH ++++++fsp + +as+s Dgt++iW+ tr|C3YCB2|C3YCB2_BRAFL 497 LGTLRGHkRGIWCVDFSPMDQVVASSSADGTIKIWS 532 789****655*************************5 PP == domain 9 score: 22.4 bits; conditional E-value: 2.4e-06 EEEEEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawla.sGsdDgtvriW 37 +cl+t++GH +sv + f + ga l+ sGs Dg +++W tr|C3YCB2|C3YCB2_BRAFL 537 TCLKTFEGHdCSVMKVIFLSRGAQLLsSGS-DGLIKLW 573 79*******888*99997777777662667.******* PP == domain 10 score: 9.0 bits; conditional E-value: 0.041 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +c +t++ H + +++l ++ + ++sG D ++ +W+ tr|C3YCB2|C3YCB2_BRAFL 579 ECDQTFDQHeDKIWALVANSAETHVVSGAADSNIIMWK 616 6889*****666****98888888899*99*******6 PP >> tr|C3XR73|C3XR73_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_210487 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 18.7 0.1 3.6e-05 0.0038 4 38 .] 45 82 .. 42 82 .. 0.84 2 ! 19.3 0.0 2.3e-05 0.0024 4 38 .] 89 126 .. 86 126 .. 0.83 3 ? 9.7 0.1 0.024 2.5 12 37 .. 140 165 .. 129 165 .. 0.86 4 ? 8.6 0.0 0.057 5.9 15 38 .] 241 262 .. 232 262 .. 0.83 5 ? 5.6 0.0 0.49 51 15 38 .] 305 328 .. 295 328 .. 0.78 6 ! 15.4 0.2 0.00039 0.041 13 38 .] 348 383 .. 339 383 .. 0.73 7 ! 18.8 0.2 3.3e-05 0.0034 3 36 .. 429 462 .. 427 464 .. 0.89 8 ? 7.6 0.0 0.11 12 4 37 .. 471 509 .. 468 510 .. 0.68 9 ? 8.4 0.0 0.065 6.8 3 35 .. 517 552 .. 515 553 .. 0.76 10 ? 6.2 0.0 0.32 33 17 38 .] 585 606 .. 571 606 .. 0.84 11 ? 6.0 0.0 0.37 38 13 38 .] 627 651 .. 610 651 .. 0.70 12 ! 18.1 0.0 5.4e-05 0.0057 1 38 [] 655 693 .. 655 693 .. 0.88 Alignments for each domain: == domain 1 score: 18.7 bits; conditional E-value: 3.6e-05 EEEEESS.SSEEEEEEETTSSEEEEE..ETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasG..sdDgtvriWd 38 +++ + + +++lafs+dg+++++G + + vr+Wd tr|C3XR73|C3XR73_BRAFL 45 SHIFNTSrKTISALAFSKDGKYVVTGesGHQPGVRVWD 82 5777777777**************987656*******9 PP == domain 2 score: 19.3 bits; conditional E-value: 2.3e-05 EEEEESS.SSEEEEEEETTSSEEEEEET..TSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsd..DgtvriWd 38 + ++ GH ++v+++afs++ ++++s ++ D v +W+ tr|C3XR73|C3XR73_BRAFL 89 VAEFQGHkFGVSCVAFSSNMKYVVSVGYqhDMLVNVWN 126 6789***777************99754223*******8 PP == domain 3 score: 9.7 bits; conditional E-value: 0.024 S.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 12 s.vtslafspdgawlasGsdDgtvriW 37 s v +++fs d++++++ + +++v++W tr|C3XR73|C3XR73_BRAFL 140 SkVKAMSFSEDSSYFVTVG-NRHVKFW 165 2488999**********9*.******* PP == domain 4 score: 8.6 bits; conditional E-value: 0.057 EEEEETTSSEEEEEETTSEEEEEE CS WD40 15 slafspdgawlasGsdDgtvriWd 38 ++ s + + +a+G+ Dg vr++d tr|C3XR73|C3XR73_BRAFL 241 CI--SVSENHIACGCADGVVRLFD 262 44..7788999***99******98 PP == domain 5 score: 5.6 bits; conditional E-value: 0.49 EEEEETTSSEEEEEETTSEEEEEE CS WD40 15 slafspdgawlasGsdDgtvriWd 38 +++++ ++ +++ dD+++++Wd tr|C3XR73|C3XR73_BRAFL 305 AVKYDEQNNKVTCVYDDHSLYVWD 328 5666777777755589*******9 PP == domain 6 score: 15.4 bits; conditional E-value: 0.00039 EEEEE...........EETTSSEEEEEETTSEEEEEE CS WD40 13 vtsla...........fspdgawlasGsdDgtvriWd 38 v+++ p g+++++Gs D t+riW+ tr|C3XR73|C3XR73_BRAFL 348 VWGVEtypnvpegfkaALPAGSFITCGS-DDTIRIWN 383 5555555555555555678899999999.*******8 PP == domain 7 score: 18.8 bits; conditional E-value: 3.3e-05 EEEEEESSSSEEEEEEETTSSEEEEEETTSEEEE CS WD40 3 clrtltGHssvtslafspdgawlasGsdDgtvri 36 +++++ G ++v+++++spdg+ lasG++ g++r+ tr|C3XR73|C3XR73_BRAFL 429 TVTIYGGKNGVRCVKVSPDGQHLASGDRCGNIRV 462 5678889999****************99999997 PP == domain 8 score: 7.6 bits; conditional E-value: 0.11 EEEEESS.SSEEEEEEETTSSE..........EEEEETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgaw..........lasGsdDgtvriW 37 l+ l++H + v +l + las+s+D+ ++i+ tr|C3XR73|C3XR73_BRAFL 471 LKYLEAHdGEVLCLE------YanpdqtglnlLASSSRDRLIHIF 509 556789955599996......3333333466589999*****997 PP == domain 9 score: 8.4 bits; conditional E-value: 0.065 EEEEEESS.SSEEEEE.EETTSSE.EEEEETTSEEE CS WD40 3 clrtltGH.ssvtsla.fspdgaw.lasGsdDgtvr 35 +l+tl+ H +t+++ ++++g++ ++s++ D+ ++ tr|C3XR73|C3XR73_BRAFL 517 LLQTLDDHsAAITAVKfTDHNGQLqMLSCGADKALM 552 7899****555*****88888888845666699775 PP == domain 10 score: 6.2 bits; conditional E-value: 0.32 EEETTSSEEEEEETTSEEEEEE CS WD40 17 afspdgawlasGsdDgtvriWd 38 +++ ++++a+++ D++vri++ tr|C3XR73|C3XR73_BRAFL 585 DVDITKKYVATACQDRNVRIFN 606 55667899************97 PP == domain 11 score: 6.0 bits; conditional E-value: 0.37 EEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 13 vtslafspdgawla.sGsdDgtvriWd 38 + ++ +p+g + + s+s D+++ i+d tr|C3XR73|C3XR73_BRAFL 627 I-KVQLDPSGMYAVtSCS-DKNLSIYD 651 4.567799****762667.******98 PP == domain 12 score: 18.1 bits; conditional E-value: 5.4e-05 TEEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 g+c+ t GHs vt+++f p + l+s s Dg + +W+ tr|C3XR73|C3XR73_BRAFL 655 GECVATMFGHSElVTGVKFTPGLKRLISTSGDGCIFVWK 693 68999999**668************997666*******6 PP >> tr|C3ZAF5|C3ZAF5_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_72242 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 24.9 1.3 4e-07 4.2e-05 3 38 .] 480 514 .. 478 514 .. 0.82 2 ! 23.4 0.4 1.2e-06 0.00012 4 38 .] 523 556 .. 520 556 .. 0.87 3 ! 19.7 0.1 1.8e-05 0.0019 4 38 .] 569 602 .. 566 602 .. 0.80 4 ! 30.7 0.8 5.7e-09 5.9e-07 1 38 [] 606 642 .. 606 642 .. 0.84 5 ! 26.2 0.2 1.5e-07 1.5e-05 1 38 [] 645 681 .. 645 681 .. 0.92 6 ! 11.9 1.4 0.0049 0.51 8 38 .] 697 726 .. 685 726 .. 0.69 7 ! 25.7 0.1 2.1e-07 2.2e-05 2 38 .] 731 766 .. 730 766 .. 0.82 Alignments for each domain: == domain 1 score: 24.9 bits; conditional E-value: 4e-07 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++t++GH ++++++ d + ++sGs D+t+++W+ tr|C3ZAF5|C3ZAF5_BRAFL 480 TVKTFDGHtQGISCV--VFDDTRIVSGSSDKTIKVWN 514 5899****999****..335555679*88*******8 PP == domain 2 score: 23.4 bits; conditional E-value: 1.2e-06 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + tl GH + v++l + +g+ l+sG D+t+++Wd tr|C3ZAF5|C3ZAF5_BRAFL 523 VLTLAGHsGTVRCL--HLEGNTLVSGATDRTIKVWD 556 56889**555****..999999****88*******9 PP == domain 3 score: 19.7 bits; conditional E-value: 1.8e-05 EEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 t GHs+ v++l d ++sGs+D+t+++W+ tr|C3ZAF5|C3ZAF5_BRAFL 569 RVTMIGHSDtVRCL--KVDEERVVSGSYDQTLKVWN 602 55778**556****..44666699***********8 PP == domain 4 score: 30.7 bits; conditional E-value: 5.7e-09 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g c +tl+GH v +++f++d+ ++sGs D+t++iW+ tr|C3ZAF5|C3ZAF5_BRAFL 606 GHCKHTLRGHtAAVLCVQFDDDK--IVSGSADNTIKIWN 642 5799******777****665555..559**********8 PP == domain 5 score: 26.2 bits; conditional E-value: 1.5e-07 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+cl+tl GH + vt+l + g+ ++sGs D +++Wd tr|C3ZAF5|C3ZAF5_BRAFL 645 GECLKTLIGHmDAVTCL--NFTGDKIVSGSLDSDLKFWD 681 69********999****..77777799***********9 PP == domain 6 score: 11.9 bits; conditional E-value: 0.0049 ESSSS.EEEEEEETTSSE..EEEEETTSEEEEEE CS WD40 8 tGHss.vtslafspdgaw..lasGsdDgtvriWd 38 +GH++ +++l + ++s+ dD+t+++W+ tr|C3ZAF5|C3ZAF5_BRAFL 697 EGHTGvIRCL----QADHwrIVSAADDKTLKVWS 726 49*7757***....333358888999*******5 PP == domain 7 score: 25.7 bits; conditional E-value: 2.1e-07 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + l tl+ H ++vt+l + + +++sGs+D+tv++Wd tr|C3ZAF5|C3ZAF5_BRAFL 731 KRLVTLRNHtDGVTCL--QFNDYMIVSGSYDKTVKLWD 766 567799***777****..44555589***********9 PP >> tr|C3XR19|C3XR19_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_277961 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 20.1 0.0 1.3e-05 0.0013 12 38 .] 16 42 .. 6 42 .. 0.90 2 ! 29.2 0.2 1.7e-08 1.8e-06 2 38 .] 47 84 .. 46 84 .. 0.91 3 ! 32.9 0.2 1.2e-09 1.2e-07 2 38 .] 89 126 .. 88 126 .. 0.95 4 ! 24.6 0.1 4.7e-07 4.9e-05 5 37 .. 162 195 .. 159 196 .. 0.91 5 ! 27.5 0.2 5.8e-08 6e-06 4 38 .] 205 240 .. 202 240 .. 0.93 Alignments for each domain: == domain 1 score: 20.1 bits; conditional E-value: 1.3e-05 SEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriWd 38 +v++++f++ +++++sG+dD ++++W+ tr|C3XR19|C3XR19_BRAFL 16 PVRGISFHQQQPLFVSGGDDYKIKVWN 42 59************************8 PP == domain 2 score: 29.2 bits; conditional E-value: 1.7e-08 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +cl tl GH + ++ f+++ +w++s+sdD+t+r+W+ tr|C3XR19|C3XR19_BRAFL 47 RCLFTLLGHlDYIRTTFFHHEYPWIISASDDQTIRVWN 84 79*******999*5555********************8 PP == domain 3 score: 32.9 bits; conditional E-value: 1.2e-09 EEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 +c+ +ltGH++ v + +f+p+ ++++s+s D+tvr+Wd tr|C3XR19|C3XR19_BRAFL 89 TCICVLTGHNHyVMCAQFHPSEDMVVSASLDQTVRVWD 126 6999*****888*************************9 PP == domain 4 score: 24.6 bits; conditional E-value: 4.7e-07 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriW 37 ++l+GH +v+ af+p+ ++++sG dD+ v++W tr|C3XR19|C3XR19_BRAFL 162 HVLEGHdRGVNWAAFHPSMPLIVSGADDRQVKLW 195 899***666************************* PP == domain 5 score: 27.5 bits; conditional E-value: 5.8e-08 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + t++GH ++v+++ f+p + +++s s+D+++r+Wd tr|C3XR19|C3XR19_BRAFL 205 VDTCRGHyNNVSCCLFHPRQELILSNSEDKSIRVWD 240 6799*******9999*********88*********9 PP >> tr|C3YZV2|C3YZV2_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_119198 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 35.6 2.5 1.7e-10 1.7e-08 3 38 .] 91 127 .. 89 127 .. 0.92 2 ! 26.9 0.0 9.1e-08 9.5e-06 4 38 .] 134 169 .. 131 169 .. 0.93 3 ! 17.7 0.5 7.2e-05 0.0075 2 38 .] 174 211 .. 173 211 .. 0.93 4 ! 25.5 0.3 2.6e-07 2.7e-05 3 38 .] 217 253 .. 215 253 .. 0.89 5 ? 5.7 0.0 0.45 47 2 37 .. 258 293 .. 257 294 .. 0.86 6 ! 23.1 0.1 1.4e-06 0.00015 2 38 .] 299 335 .. 298 335 .. 0.90 7 ? 5.3 0.0 0.6 62 11 37 .. 358 384 .. 345 385 .. 0.82 Alignments for each domain: == domain 1 score: 35.6 bits; conditional E-value: 1.7e-10 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + r+++GH ++v++l+f p ++w+++Gs D+ ++iWd tr|C3YZV2|C3YZV2_BRAFL 91 LHRVISGHhGWVRCLDFEPGNQWFVTGSNDRVIKIWD 127 567899**899*************************9 PP == domain 2 score: 26.9 bits; conditional E-value: 9.1e-08 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +ltGH s v+++ +sp +++l+s+++D+ v+ Wd tr|C3YZV2|C3YZV2_BRAFL 134 KLSLTGHiSTVRGVVVSPRQPYLFSCGEDKQVKCWD 169 5689*******************************9 PP == domain 3 score: 17.7 bits; conditional E-value: 7.2e-05 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + +r++ GH s ++++ +p + l+++++D + r+Wd tr|C3YZV2|C3YZV2_BRAFL 174 KVIRHYHGHlSACYAIDLHPTIDVLVTCGRDASARVWD 211 5689*****999999999999999*************9 PP == domain 4 score: 25.5 bits; conditional E-value: 2.6e-07 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++ l+GH + v +++ + + +++Gs D+t+r+Wd tr|C3YZV2|C3YZV2_BRAFL 217 NIHCLSGHtNTVADVKCQATEPQIITGSHDCTIRLWD 253 7899****9889888888888889***99*******9 PP == domain 5 score: 5.7 bits; conditional E-value: 0.45 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 ++ tlt H +s++s+ +p ++as+s +++ W tr|C3YZV2|C3YZV2_BRAFL 258 KTRATLTNHkKSIRSIVLHPKLYMFASAS-PDNIKQW 293 566799***999****9999999999999.8888888 PP == domain 6 score: 23.1 bits; conditional E-value: 1.4e-06 EEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 + l+ l+GH+ v+ la ++dg ++ sG d+gt+++Wd tr|C3YZV2|C3YZV2_BRAFL 299 NFLQNLSGHNAiVNTLALNQDGVLV-SGADNGTLHFWD 335 67899****7757***********7.8*9********9 PP == domain 7 score: 5.3 bits; conditional E-value: 0.6 SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriW 37 s++++ +f+ +g+ l+ + D+t++i+ tr|C3YZV2|C3YZV2_BRAFL 358 SGIYAAKFDLSGTRLLNCEADKTIKIY 384 45888889999999999977******8 PP >> tr|C3YG00|C3YG00_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_206373 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 20.6 0.0 8.9e-06 0.00093 5 38 .] 98 130 .. 93 130 .. 0.83 2 ! 33.8 0.7 6.1e-10 6.3e-08 1 38 [] 134 171 .. 134 171 .. 0.86 3 ! 15.9 0.0 0.00027 0.028 2 37 .. 176 210 .. 175 211 .. 0.81 4 ! 28.1 0.4 3.9e-08 4.1e-06 4 38 .] 218 253 .. 215 253 .. 0.90 5 ? 2.7 0.2 4 4.2e+02 8 38 .] 265 293 .. 257 293 .. 0.67 6 ? 7.6 0.0 0.12 12 13 38 .] 316 333 .. 304 333 .. 0.84 7 ! 25.0 0.0 3.7e-07 3.8e-05 3 38 .] 339 373 .] 337 373 .] 0.84 Alignments for each domain: == domain 1 score: 20.6 bits; conditional E-value: 8.9e-06 EEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGHss.vtslafspdgawlasGsdDgtvriWd 38 ++++GHs+ v s+ +g+ +asGs D+ vr+Wd tr|C3YG00|C3YG00_BRAFL 98 TEIRGHSDkVLSV--AFEGRRMASGSADKLVRVWD 130 5589**666****..448888*************9 PP == domain 2 score: 33.8 bits; conditional E-value: 6.1e-10 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g++l+tl+GH +++++l+f + l sGs+D t++iW+ tr|C3YG00|C3YG00_BRAFL 134 GNLLHTLKGHtKGIWCLQFFTKHLIL-SGSYDSTIKIWN 171 689*******999****666666655.8**********8 PP == domain 3 score: 15.9 bits; conditional E-value: 0.00027 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +c rtl GH ++v++l + ++++Gs D+t +iW tr|C3YG00|C3YG00_BRAFL 176 TCARTLFGHeGPVWAL--VRKDVMMVTGSQDKTAKIW 210 5889999**9999999..44444568*********** PP == domain 4 score: 28.1 bits; conditional E-value: 3.9e-08 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +tl+GH v +++ ++d + +++Gs D+++riW+ tr|C3YG00|C3YG00_BRAFL 218 AHTLKGHsAAVFAVDMDDDCTIVITGSADRSIRIWS 253 699****555*************************5 PP == domain 5 score: 2.7 bits; conditional E-value: 4 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 H +s+ + s + ++ ++s g + +W+ tr|C3YG00|C3YG00_BRAFL 265 ASHtTSIMTV--SYHRGFF-ACSAGGMIFLWN 293 5687778888..3334445.5777*******8 PP == domain 6 score: 7.6 bits; conditional E-value: 0.12 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 v +l ++s+++Dg ++ Wd tr|C3YG00|C3YG00_BRAFL 316 VEGL--------MVSAGKDGMIKYWD 333 6777........8999*********9 PP == domain 7 score: 25.0 bits; conditional E-value: 3.7e-07 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++t +GH + ++++ + d + +a++s Dg++r+Wd tr|C3YG00|C3YG00_BRAFL 339 SIQTMRGHkGQINCI--QFDETKMATASADGKIRVWD 373 57899***555****..556666999999*******9 PP >> tr|C3ZFQ7|C3ZFQ7_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_124121 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 24.2 0.0 6.5e-07 6.8e-05 11 38 .] 18 45 .. 8 45 .. 0.78 2 ! 18.5 0.1 4.3e-05 0.0044 2 38 .] 50 87 .. 49 87 .. 0.85 3 ! 34.9 0.0 2.8e-10 2.9e-08 2 38 .] 92 129 .. 91 129 .. 0.94 4 ? 4.7 0.0 0.95 99 12 36 .. 148 170 .. 136 172 .. 0.62 5 ! 16.9 0.1 0.00013 0.013 6 36 .. 181 210 .. 176 212 .. 0.85 6 ! 23.7 0.1 9.5e-07 9.9e-05 1 38 [] 216 256 .. 216 256 .. 0.87 7 ? 9.8 0.0 0.024 2.5 2 37 .. 261 297 .. 260 298 .. 0.87 Alignments for each domain: == domain 1 score: 24.2 bits; conditional E-value: 6.5e-07 SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriWd 38 + v++++f++dg++ ++++ D+++++W+ tr|C3ZFQ7|C3ZFQ7_BRAFL 18 GAVRAVRFNDDGNYCLTCGSDKSIKLWN 45 449***********776655*******8 PP == domain 2 score: 18.5 bits; conditional E-value: 4.3e-05 EEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 +++ t+tGH+ v ++a s d++ l+s + D+ v +Wd tr|C3ZFQ7|C3ZFQ7_BRAFL 50 THIMTYTGHGYeVLDVAASCDNSQLTSTGADKMVILWD 87 57899****446*****9999999986666*******9 PP == domain 3 score: 34.9 bits; conditional E-value: 2.8e-10 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + +r ++GH + v++++f+ +++ +asGs D+tvr+Wd tr|C3ZFQ7|C3ZFQ7_BRAFL 92 KMVRRFRGHvGRVNCVKFNEESTVIASGSIDNTVRLWD 129 67899****999*************************9 PP == domain 4 score: 4.7 bits; conditional E-value: 0.95 SEEEEEEETTSSEEEEEETTSEEEE CS WD40 12 svtslafspdgawlasGsdDgtvri 36 ++ s++ s++ +++Gs Dg vr tr|C3ZFQ7|C3ZFQ7_BRAFL 148 GIFSIKLSDHE--ILTGSVDGRVRR 170 46666444444..449*******95 PP == domain 5 score: 16.9 bits; conditional E-value: 0.00013 EEESSSSEEEEEEETTSSEEEEEETTSEEEE CS WD40 6 tltGHssvtslafspdgawlasGsdDgtvri 36 + G +vt+++f +dg+ ++s+ D t+r+ tr|C3ZFQ7|C3ZFQ7_BRAFL 181 DYIGS-PVTCVCFTKDGQCVLSSALDSTLRL 210 56666.8**************9989****98 PP == domain 6 score: 23.7 bits; conditional E-value: 9.5e-07 TEEEEEEESSSS..E.EEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGHss..v.tslafspdgawlasGsdDgtvriWd 38 g++l+++tGH+s t+++ + a ++sGs+Dg++++Wd tr|C3ZFQ7|C3ZFQ7_BRAFL 216 GELLGEYTGHKSteFkTDCCLTNSDAHVVSGSEDGKIYFWD 256 57899*****5558559999999999999***********9 PP == domain 7 score: 9.8 bits; conditional E-value: 0.024 EEEEEEESS.SS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ss.vtslafspdgawlasGsdDgtvriW 37 + ++tl+ ++ v+sl+++p+ + ++s+ + v++W tr|C3ZFQ7|C3ZFQ7_BRAFL 261 KVVHTLSKAgKGvVHSLSYHPSLPCMLSAA-ENLVKVW 297 77899987767767*************999.******* PP >> tr|C3Y9Y1|C3Y9Y1_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_60329 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.6 0.0 0.00034 0.035 5 37 .. 13 47 .. 9 47 .. 0.86 2 ! 17.6 0.2 8.3e-05 0.0086 5 37 .. 60 98 .. 57 99 .. 0.85 3 ! 22.9 0.0 1.7e-06 0.00018 2 37 .. 104 139 .. 103 139 .. 0.92 4 ! 25.2 0.0 3.1e-07 3.2e-05 2 37 .. 143 179 .. 142 180 .. 0.93 5 ! 17.2 0.1 0.00011 0.011 1 37 [. 182 218 .. 182 218 .. 0.88 6 ! 27.2 0.0 7.5e-08 7.8e-06 1 38 [] 222 260 .. 222 260 .. 0.93 7 ? 6.0 0.1 0.37 38 1 36 [. 262 297 .. 262 299 .. 0.79 Alignments for each domain: == domain 1 score: 15.6 bits; conditional E-value: 0.00034 EEEESS.SSEEEEE..EETTSSEEEEEETTSEEEEE CS WD40 5 rtltGH.ssvtsla..fspdgawlasGsdDgtvriW 37 +l GH +v+++a + pdga + ++s+D+t r+W tr|C3Y9Y1|C3Y9Y1_BRAFL 13 CSLIGHsMDVRAVAaaVYPDGAVV-TASRDQTARLW 47 5688**666*999999*******8.6899******* PP == domain 2 score: 17.6 bits; conditional E-value: 8.3e-05 EEEESS.SSEEEEE.EETTSSE....EEEEETTSEEEEE CS WD40 5 rtltGH.ssvtsla.fspdgaw....lasGsdDgtvriW 37 ++ tGH ++++s++ +p+ ++ +++Gs D++++i+ tr|C3Y9Y1|C3Y9Y1_BRAFL 60 HVMTGHsKFISSVClLPPSDDYphgmVVTGSNDHSIHIY 98 7889**988*****96666666669999**********8 PP == domain 3 score: 22.9 bits; conditional E-value: 1.7e-06 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +++ +ltGH + v+sla + g++l sGs+D+t r+W tr|C3Y9Y1|C3Y9Y1_BRAFL 104 EPVFKLTGHkNTVCSLAAGKFGTLL-SGSWDKTARVW 139 57889****888*****9999***8.7********** PP == domain 4 score: 25.2 bits; conditional E-value: 3.1e-07 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +c+ tl+GH v+++a p++ +++Gs D+t+++W tr|C3Y9Y1|C3Y9Y1_BRAFL 143 RCMMTLSGHeAAVWAVAIMPEHGIMLTGSADKTIKMW 179 699******888*****999999999*********** PP == domain 5 score: 17.2 bits; conditional E-value: 0.00011 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 g+c t+tGH ++v+sla+ ++ +l+ +s Dg++r W tr|C3Y9Y1|C3Y9Y1_BRAFL 182 GKCELTFTGHeDCVRSLAVVSNVEFLS-ASNDGSIRRW 218 68999*****888****9999999995.677*****77 PP == domain 6 score: 27.2 bits; conditional E-value: 7.5e-08 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+c +++ GH + v+sla p+g+ ++++++D+tvr+W+ tr|C3Y9Y1|C3Y9Y1_BRAFL 222 GECSQVYYGHtNYVYSLAMLPNGQDFVTSGEDRTVRVWK 260 689*******888*****9999999999999*******6 PP == domain 7 score: 6.0 bits; conditional E-value: 0.37 TEEEEEEESS.SSEEEEEEETTSSEEEEE.ETTSEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasG.sdDgtvri 36 g+c++t+t + +sv+s+a ++g+ + G s D+ r+ tr|C3Y9Y1|C3Y9Y1_BRAFL 262 GECVQTITLQaQSVWSVACLSNGDIAV-GaS-DNVTRV 297 5788887755569************76.636.998887 PP >> tr|C3YQA4|C3YQA4_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_230572 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 24.8 0.1 4.1e-07 4.3e-05 4 38 .] 57 92 .. 54 92 .. 0.91 2 ! 11.1 0.0 0.0089 0.92 12 34 .. 108 130 .. 97 133 .. 0.83 3 ! 11.1 0.1 0.0091 0.95 10 38 .] 152 181 .. 143 181 .. 0.81 4 ! 20.6 0.8 8.7e-06 0.00091 2 38 .] 186 224 .. 185 224 .. 0.87 5 ! 36.3 0.3 9.5e-11 9.9e-09 1 38 [] 228 266 .. 228 266 .. 0.96 6 ! 15.4 0.1 0.00039 0.041 14 38 .] 286 310 .. 279 310 .. 0.95 7 ! 23.7 0.2 9.6e-07 0.0001 2 36 .. 313 350 .. 312 350 .. 0.86 Alignments for each domain: == domain 1 score: 24.8 bits; conditional E-value: 4.1e-07 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 r+l+GH + v ++++s d++ l+s+s Dg+v +Wd tr|C3YQA4|C3YQA4_BRAFL 57 RRVLKGHqGKVLDMDWSIDKRRLVSSSQDGKVIVWD 92 589****666*************************9 PP == domain 2 score: 11.1 bits; conditional E-value: 0.0089 SEEEEEEETTSSEEEEEETTSEE CS WD40 12 svtslafspdgawlasGsdDgtv 34 ++ s+af p+g+ +a+G+ D+++ tr|C3YQA4|C3YQA4_BRAFL 108 WIMSCAFAPSGDIIACGGLDNKC 130 5999*************999887 PP == domain 3 score: 11.1 bits; conditional E-value: 0.0091 S.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvriWd 38 H s ++++f ++g ++++s D+t+ +Wd tr|C3YQA4|C3YQA4_BRAFL 152 HtSYMSCCRFVKSGYQILTCSGDCTCALWD 181 7555789999999999999988*******9 PP == domain 4 score: 20.6 bits; conditional E-value: 8.7e-06 EEEEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 q+++++ GH s+v +l+ sp + ++sGs D+t +Wd tr|C3YQA4|C3YQA4_BRAFL 186 QLMQSFHGHiSDVLCLDISPVHCRtFLSGSSDKTASLWD 224 7899************977777777779*88*******9 PP == domain 5 score: 36.3 bits; conditional E-value: 9.5e-11 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+c+++++GH +++++++f p g ++++sdDgt+r++d tr|C3YQA4|C3YQA4_BRAFL 228 GRCVHSFDGHdGDINGVKFFPTGESFVTASDDGTCRLYD 266 68********888************************98 PP == domain 6 score: 15.4 bits; conditional E-value: 0.00039 EEEEEETTSSEEEEEETTSEEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriWd 38 t+++ s++g+++++G D tv +Wd tr|C3YQA4|C3YQA4_BRAFL 286 TCVDISKSGKLMFAGYNDYTVNVWD 310 8**************99*******9 PP == domain 7 score: 23.7 bits; conditional E-value: 9.6e-07 EEEEEEE..SS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 2 qclrtlt..GH.ssvtslafspdgawlasGsdDgtvri 36 +c+r+ + +H + vt+l+ spdg+ ++sGs+D t+++ tr|C3YQA4|C3YQA4_BRAFL 313 KCVRVGRiyAHdNKVTCLQRSPDGTAVCSGSWDTTLKV 350 5667754459*888**********************97 PP >> tr|C3YEK2|C3YEK2_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_125415 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.5 0.0 0.014 1.5 12 37 .. 819 844 .. 804 845 .. 0.75 2 ! 17.9 0.1 6.3e-05 0.0066 5 38 .] 964 998 .. 960 998 .. 0.90 3 ? 4.0 0.1 1.6 1.7e+02 12 35 .. 1102 1124 .. 1086 1127 .. 0.76 4 ? 9.2 0.0 0.035 3.6 9 38 .] 1143 1173 .. 1137 1173 .. 0.90 5 ! 28.6 0.0 2.6e-08 2.8e-06 7 38 .] 1238 1271 .. 1232 1271 .. 0.89 6 ! 23.4 0.1 1.1e-06 0.00012 6 37 .. 1286 1318 .. 1282 1319 .. 0.89 7 ! 28.1 0.3 3.7e-08 3.9e-06 5 38 .] 1327 1361 .. 1323 1361 .. 0.90 8 ! 18.7 0.1 3.7e-05 0.0038 4 38 .] 1368 1403 .. 1365 1403 .. 0.85 Alignments for each domain: == domain 1 score: 10.5 bits; conditional E-value: 0.014 SEEEEEEETTSSEEEEEETTSEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriW 37 + ++++s+dg+++a+G+ g+vr++ tr|C3YEK2|C3YEK2_BRAFL 819 AILDCDVSSDGKFFACGDSQGKVRVF 844 278889*********9966*****97 PP == domain 2 score: 17.9 bits; conditional E-value: 6.3e-05 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +l H ++ +++f ++g ++ G++D+++ +Wd tr|C3YEK2|C3YEK2_BRAFL 964 MSLGDHqAPIQCCCFVQNGENVVVGCRDKSLNVWD 998 577889888*************************9 PP == domain 3 score: 4.0 bits; conditional E-value: 1.6 S.EEEEEEETTSSEEEEEETTSEEE CS WD40 12 s.vtslafspdgawlasGsdDgtvr 35 s ++++a+ d w+ +++Dg v tr|C3YEK2|C3YEK2_BRAFL 1102 SyISCCATKGDYVWV--CGEDGRVS 1124 259999999999996..555*9986 PP == domain 4 score: 9.2 bits; conditional E-value: 0.035 SSSSEEEEEEETTSSEEEEE..ETTSEEEEEE CS WD40 9 GHssvtslafspdgawlasG..sdDgtvriWd 38 +H ++ +afs++++ l+++ +++gt+ +Wd tr|C3YEK2|C3YEK2_BRAFL 1143 TH-GIMTCAFSSNSKELVTCehGENGTLTVWD 1173 68.898999***********9879*******9 PP == domain 5 score: 28.6 bits; conditional E-value: 2.6e-08 EESS..SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH..ssvtslafspdgawlasGsdDgtvriWd 38 l+GH + +t++a spd+a +a+Gs D t+ +Wd tr|C3YEK2|C3YEK2_BRAFL 1238 LKGHayFRITCMALSPDNAIVAAGSTDTTLCVWD 1271 89**7666*************************9 PP == domain 6 score: 23.4 bits; conditional E-value: 1.1e-06 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriW 37 +++GH ++v+++afspd++ lasG++ g++ +W tr|C3YEK2|C3YEK2_BRAFL 1286 IFEGHsDGVSCCAFSPDSQTLASGDRAGKLILW 1318 799**666****************999999999 PP == domain 7 score: 28.1 bits; conditional E-value: 3.7e-08 EEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGHss.vtslafspdgawlasGsdDgtvriWd 38 +++GH++ +t+l+fs d+ lasG++Dg v +Wd tr|C3YEK2|C3YEK2_BRAFL 1327 VVCRGHGDvITCLSFSADSCQLASGGKDGVVGLWD 1361 5789**8857************************9 PP == domain 8 score: 18.7 bits; conditional E-value: 3.7e-05 EEEEESS..SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH..ssvtslafspdgawlasGsdDgtvriWd 38 l +l+++ s+vts+ fsp+g l+s+ Dgt++ Wd tr|C3YEK2|C3YEK2_BRAFL 1368 LFSLKAQnaSCVTSCEFSPSGLILSSAA-DGTIHAWD 1403 66788886555*************8888.*******9 PP >> tr|C3ZR05|C3ZR05_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_124920 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 25.6 0.0 2.4e-07 2.5e-05 1 38 [] 398 436 .. 398 436 .. 0.93 2 ! 32.3 0.4 1.9e-09 1.9e-07 2 38 .] 452 489 .. 451 489 .. 0.94 3 ! 18.3 0.5 4.8e-05 0.005 7 38 .] 510 542 .. 505 542 .. 0.85 4 ? 3.4 0.0 2.4 2.5e+02 13 38 .] 612 637 .. 593 637 .. 0.76 5 ! 31.8 0.1 2.6e-09 2.7e-07 3 38 .] 643 679 .. 641 679 .. 0.91 6 ! 14.5 0.0 0.00078 0.081 2 32 .. 684 719 .. 683 724 .. 0.84 Alignments for each domain: == domain 1 score: 25.6 bits; conditional E-value: 2.4e-07 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++ +tl+ H + v++laf+p + l+++s+D+t+++W+ tr|C3ZR05|C3ZR05_BRAFL 398 WNPKYTLRSHfDAVRALAFHPIEPVLITASEDHTLKMWN 436 57889*****666*************************8 PP == domain 2 score: 32.3 bits; conditional E-value: 1.9e-09 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++++t+++H ++vt+l++s++g+ sGs D t+r W+ tr|C3ZR05|C3ZR05_BRAFL 452 EPIYTFRAHsGPVTCLCVSSNGDQCYSGSTDSTIRCWN 489 5899*****777*************************8 PP == domain 3 score: 18.3 bits; conditional E-value: 4.8e-05 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 l GH + ++++ ++ ++ l+s+s D tvr+W+ tr|C3ZR05|C3ZR05_BRAFL 510 LVGHtDAIWGVTIHSVKQQLLSCSADSTVRLWS 542 77**666999998888888999*99*******5 PP == domain 4 score: 3.4 bits; conditional E-value: 2.4 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 ++ + +p + +++++D++++++d tr|C3ZR05|C3ZR05_BRAFL 612 INRVVAHPTLPITITAHEDRHIKFFD 637 5666666666776799*******998 PP == domain 5 score: 31.8 bits; conditional E-value: 2.6e-09 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + t +H + vtsla++p+g +l+sGs D+++r+W+ tr|C3ZR05|C3ZR05_BRAFL 643 MVNTMVAHlDAVTSLAVDPNGLYLLSGSHDCSIRLWN 679 5677889*999****************99*******8 PP == domain 6 score: 14.5 bits; conditional E-value: 0.00078 EEEEEEESS..SS...EEEEEEETTSSEEEEEETTS CS WD40 2 qclrtltGH..ss...vtslafspdgawlasGsdDg 32 +c++++t H ++ + ++af+p+++++as++ D tr|C3ZR05|C3ZR05_BRAFL 684 TCVQEITSHrkKFdesIFDVAFHPSKPYIASAGADA 719 699999***9644899**************998886 PP >> tr|C3YEQ5|C3YEQ5_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_122718 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 32.3 0.3 1.8e-09 1.9e-07 3 38 .] 15 51 .. 13 51 .. 0.92 2 ! 21.0 0.3 6.5e-06 0.00068 2 38 .] 56 91 .. 55 91 .. 0.80 3 ! 18.5 0.1 4.1e-05 0.0042 2 37 .. 96 133 .. 95 134 .. 0.90 4 ? 8.5 0.1 0.061 6.3 1 37 [. 138 191 .. 138 192 .. 0.77 5 ! 17.1 0.0 0.00012 0.012 1 37 [. 195 232 .. 195 233 .. 0.92 6 ! 14.6 0.1 0.00071 0.074 2 37 .. 238 272 .. 237 273 .. 0.79 7 ? 4.2 0.0 1.4 1.5e+02 3 31 .. 279 306 .. 277 313 .. 0.68 8 ! 18.7 0.0 3.6e-05 0.0038 3 38 .] 319 353 .. 317 353 .. 0.73 Alignments for each domain: == domain 1 score: 32.3 bits; conditional E-value: 1.8e-09 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++t+t H ++v++la s+dg++l++Gs+D+t r+W+ tr|C3YEQ5|C3YEQ5_BRAFL 15 LIKTCTDHsGGVNCLALSRDGSLLITGSEDRTARLWS 51 57899***666*************************5 PP == domain 2 score: 21.0 bits; conditional E-value: 6.5e-06 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +c+++ltGH + +ts+ f ++ a ++s D+t+r Wd tr|C3YEQ5|C3YEQ5_BRAFL 56 ECVGVLTGHaDYITSVGFVDNYAV--TSSADKTIRKWD 91 69*******666****55555554..7777*******9 PP == domain 3 score: 18.5 bits; conditional E-value: 4.1e-05 EEEEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtsla.fspdgawlasGsdDgtvriW 37 +c+ ++tGH s+v+ +a g +l+++s+D+t r W tr|C3YEQ5|C3YEQ5_BRAFL 96 DCVLVFTGHsSPVNRVAaGKYTGGLLFTSSYDRTARCW 133 799******888****998888888999999******* PP == domain 4 score: 8.5 bits; conditional E-value: 0.061 TEEEEEEESSSS....EEEEE.............EETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGHss....vtsla.............fspdgawlasGsdDgtvriW 37 g+c++++ GH+ + +a ++ +++++++Gs D t + W tr|C3YEQ5|C3YEQ5_BRAFL 138 GECVQVFLGHKRgitpIIFVApdgdnspkaqhdtVDASKDLVLTGSLDSTAKAW 191 6899******444444447767788777777788888888899*******9999 PP == domain 5 score: 17.1 bits; conditional E-value: 0.00012 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 g+c +t++GH + s+a+++ g+ l++Gs D +v+ W tr|C3YEQ5|C3YEQ5_BRAFL 195 GKCRTTFKGHkMAILSMAVDRQGKTLFTGSHDANVMAW 232 6899******666****************99**99988 PP == domain 6 score: 14.6 bits; conditional E-value: 0.00071 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 + lrt++GH +++ ++ ++++ +Gs D+t + W tr|C3YEQ5|C3YEQ5_BRAFL 238 EALRTFEGHqGGIICI--EICNKLMYTGSSDHTAKCW 272 679******7776677..44555588**99******9 PP == domain 7 score: 4.2 bits; conditional E-value: 1.4 EEEEEESSSS.EEEEEEETTSSE....EEEEETT CS WD40 3 clrtltGHss.vtslafspdgaw....lasGsdD 31 +r+++G+++ v+++a + l++Gs D tr|C3YEQ5|C3YEQ5_BRAFL 279 RTREYKGQKHtVSCMA------FhegvLFTGSGD 306 5789****777****5......433334467656 PP == domain 8 score: 18.7 bits; conditional E-value: 3.6e-05 EEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 + rt++GH ++++a+ dg+++++++ Dgt ++W+ tr|C3YEQ5|C3YEQ5_BRAFL 319 LKRTYRGHEYiINAVAV-VDGKLFTASH-DGTMKVWN 353 679*****555799953.3556656556.*******8 PP >> tr|C3Z4E3|C3Z4E3_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_127963 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 14.5 1.1 0.00076 0.079 9 38 .] 14 48 .. 5 48 .. 0.84 2 ! 23.1 0.0 1.4e-06 0.00015 4 38 .] 57 92 .. 54 92 .. 0.91 3 ! 16.4 0.0 0.0002 0.02 14 38 .] 110 134 .. 96 134 .. 0.84 4 ! 27.9 0.0 4.4e-08 4.5e-06 8 38 .] 156 187 .. 148 187 .. 0.88 5 ! 34.2 3.0 4.4e-10 4.6e-08 3 38 .] 193 229 .. 191 229 .. 0.93 6 ! 17.8 0.4 6.7e-05 0.007 1 38 [] 233 271 .. 233 271 .. 0.95 Alignments for each domain: == domain 1 score: 14.5 bits; conditional E-value: 0.00076 SS.SSEEEEEEETTSSE..........EEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgaw..........lasGsdDgtvriWd 38 +H + ++s+ aw +++Gs D +v++W+ tr|C3Z4E3|C3Z4E3_BRAFL 14 AHdDAIWSC------AWarsdtdgvdnIVTGSVDDSVKVWK 48 79555****......77777777999999***********6 PP == domain 2 score: 23.1 bits; conditional E-value: 1.4e-06 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +tl+GH +v s++ +++g+++as+s D ++r+Wd tr|C3Z4E3|C3Z4E3_BRAFL 57 RWTLEGHqLGVVSVDMNQEGTMVASSSLDAHIRLWD 92 5799***76699***********************9 PP == domain 3 score: 16.4 bits; conditional E-value: 0.0002 EEEEEETTSSEEEEEETTSEEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriWd 38 + +afspd++++asGs g+v i++ tr|C3Z4E3|C3Z4E3_BRAFL 110 WTVAFSPDSRFIASGSHGGKVNIFN 134 789************99****9987 PP == domain 4 score: 27.9 bits; conditional E-value: 4.4e-08 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 GH +++slafs d+++l+++sdD +++i+d tr|C3Z4E3|C3Z4E3_BRAFL 156 YGHaMPIRSLAFSGDSQLLVTASDDSHIKIYD 187 39*888*************************8 PP == domain 5 score: 34.2 bits; conditional E-value: 4.4e-10 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + +tl+GH s+v ++fspd++ ++s+s D++v++Wd tr|C3Z4E3|C3Z4E3_BRAFL 193 LSHTLSGHaSWVLNVSFSPDNTHFVSSSSDKSVKVWD 229 679*****999*************99877*******9 PP == domain 6 score: 17.8 bits; conditional E-value: 6.7e-05 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +qc +t+ H + v++ ++ +g+ ++s sdD+ ++i+d tr|C3Z4E3|C3Z4E3_BRAFL 233 RQCAHTFFDHlDQVWCAEYNTNGTKIVSVSDDRAIHIYD 271 5899**999*999**************99********98 PP >> tr|C3Z0K8|C3Z0K8_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_268300 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 28.2 0.0 3.6e-08 3.8e-06 9 38 .] 212 242 .. 204 242 .. 0.88 2 ! 26.1 0.0 1.6e-07 1.7e-05 13 38 .] 267 292 .. 252 292 .. 0.88 3 ! 28.7 0.1 2.5e-08 2.6e-06 1 36 [. 296 333 .. 296 334 .. 0.94 4 ! 32.3 0.0 1.8e-09 1.9e-07 1 38 [] 339 377 .. 339 377 .. 0.92 5 ? 5.2 0.0 0.64 67 2 34 .. 430 466 .. 429 470 .. 0.68 Alignments for each domain: == domain 1 score: 28.2 bits; conditional E-value: 3.6e-08 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 G+ s+v + +fspdg++l++Gs Dg + +W+ tr|C3Z0K8|C3Z0K8_BRAFL 212 GQkSHVECARFSPDGQYLITGSVDGFIEVWN 242 66566*************************8 PP == domain 2 score: 26.1 bits; conditional E-value: 1.6e-07 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 v +l+fs+d+ +lasG+ Dg++++W+ tr|C3Z0K8|C3Z0K8_BRAFL 267 VLCLCFSRDSEMLASGGQDGKIKVWK 292 99***********************6 PP == domain 3 score: 28.7 bits; conditional E-value: 2.5e-08 TEEEEEEE.SS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 1 gqclrtlt.GH.ssvtslafspdgawlasGsdDgtvri 36 gqclr ++ +H ++vt+++fs+d++ l+s+s D+t+ri tr|C3Z0K8|C3Z0K8_BRAFL 296 GQCLRRYErAHsKGVTCVSFSKDSSQLLSASFDQTIRI 333 79*****55**999****************99*****9 PP == domain 4 score: 32.3 bits; conditional E-value: 1.8e-09 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g++l++++GH s+v+ f pdg+ l+s+s Dgtv++W+ tr|C3Z0K8|C3Z0K8_BRAFL 339 GKTLKEFRGHtSFVNEAVFTPDGHNLISASSDGTVKLWN 377 6889******888*9888*********9988*******8 PP == domain 5 score: 5.2 bits; conditional E-value: 0.64 EEEEEEE.SS.SS...EEEEEEETTSSEEEEEETTSEE CS WD40 2 qclrtlt.GH.ss...vtslafspdgawlasGsdDgtv 34 q +r++t G + v ++ +sp g w+ + ++D + tr|C3Z0K8|C3Z0K8_BRAFL 430 QIVRSFTsGKrEGgdfV-CCTVSPRGEWIYTVGEDMVL 466 55666654334113457.999********998888665 PP >> tr|C3ZNT1|C3ZNT1_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_125902 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 27.6 1.0 5.3e-08 5.6e-06 2 37 .. 408 445 .. 407 446 .. 0.94 2 ! 28.9 0.0 2.1e-08 2.2e-06 3 38 .] 453 489 .. 451 489 .. 0.92 3 ? 10.8 0.0 0.011 1.2 13 38 .] 504 533 .. 493 533 .. 0.82 4 ! 14.6 0.0 0.00072 0.075 2 37 .. 538 574 .. 537 575 .. 0.84 5 ? 6.0 0.0 0.37 39 16 37 .. 596 617 .. 589 617 .. 0.82 6 ! 20.8 0.0 8e-06 0.00084 5 38 .] 629 665 .. 625 665 .. 0.87 7 ! 15.4 0.9 0.0004 0.042 6 38 .] 674 708 .] 669 708 .] 0.75 Alignments for each domain: == domain 1 score: 27.6 bits; conditional E-value: 5.3e-08 EEEEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtsla.fspdgawlasGsdDgtvriW 37 +++++++GH +++++++ f+++g++l+s+s+D +++iW tr|C3ZNT1|C3ZNT1_BRAFL 408 KHIHSWSGHsKGISCIRlFPKSGHLLLSSSMDSKIKIW 445 6799*****999************************** PP == domain 2 score: 28.9 bits; conditional E-value: 2.1e-08 EEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 +rt+ GH++ v++++f+ dg+ ++s+ +D+ +++Wd tr|C3ZNT1|C3ZNT1_BRAFL 453 MVRTYIGHKHaVRDVCFNNDGTQFLSAAYDRYIKLWD 489 589*****778*************99999*******9 PP == domain 3 score: 10.8 bits; conditional E-value: 0.011 E.EEEEEETTSSE...EEEEETTSEEEEEE CS WD40 13 v.tslafspdgaw...lasGsdDgtvriWd 38 v ++++f+pd + +++G+ D+++ Wd tr|C3ZNT1|C3ZNT1_BRAFL 504 VpYCVKFNPDEDKqhiFVAGMSDKKIVQWD 533 668***********98778*66*******9 PP == domain 4 score: 14.6 bits; conditional E-value: 0.00072 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 + +++++ H + v+ + f ++++ +++ sdD+++r+W tr|C3ZNT1|C3ZNT1_BRAFL 538 EIVQEYDRHlGAVNTITFVDENRRFVTTSDDKSLRVW 574 567889999999999998888888888899******* PP == domain 5 score: 6.0 bits; conditional E-value: 0.37 EEEETTSSEEEEE..ETTSEEEEE CS WD40 16 lafspdgawlasG..sdDgtvriW 37 + sp+g+wl G s+D+++ i+ tr|C3ZNT1|C3ZNT1_BRAFL 596 VTLSPNGKWL--GcqSMDNKIVIY 617 557******8..53889***9986 PP == domain 6 score: 20.8 bits; conditional E-value: 8e-06 EEEESS..SS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH..ss.vtslafspdgawlasGsdDgtvriWd 38 ++++GH + + ++fspd ++++sG+ Dg++ iWd tr|C3ZNT1|C3ZNT1_BRAFL 629 KEFKGHmvAGyACQMDFSPDMSYVVSGDADGKLFIWD 665 6899**8644578999***********99*******9 PP == domain 7 score: 15.4 bits; conditional E-value: 0.0004 EEESSSS..EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGHss..vtslafspdgawlasGsdDgtvriWd 38 ++++H++ ++++ +++ + ++++++Dg +++Wd tr|C3ZNT1|C3ZNT1_BRAFL 674 KIKAHDGvcISCVWLPHETSKVITAGWDGLIKLWD 708 4689*665578885555555589***********9 PP >> tr|C3Z2P5|C3Z2P5_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_203365 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 18.2 0.2 5.2e-05 0.0054 4 38 .] 75 110 .. 73 110 .. 0.92 2 ! 28.2 0.3 3.6e-08 3.8e-06 8 38 .] 132 163 .. 121 163 .. 0.92 3 ! 27.3 0.4 7.1e-08 7.4e-06 4 38 .] 170 205 .. 167 205 .. 0.94 4 ! 15.6 0.0 0.00034 0.036 6 38 .] 214 247 .. 210 247 .. 0.79 5 ? 10.2 0.1 0.017 1.8 6 37 .. 255 287 .. 250 287 .. 0.76 6 ! 20.1 0.1 1.3e-05 0.0013 12 37 .. 307 338 .. 293 339 .. 0.79 7 ? 7.4 0.0 0.13 13 12 28 .. 358 374 .. 347 381 .. 0.82 Alignments for each domain: == domain 1 score: 18.2 bits; conditional E-value: 5.2e-05 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++l+GH + t+l +s+d++ + +G +D+++ W+ tr|C3Z2P5|C3Z2P5_BRAFL 75 IQVLRGHqLPLTCLVVSSDSKHVYTGAKDCSIIKWN 110 5789***7779*********************9997 PP == domain 2 score: 28.2 bits; conditional E-value: 3.6e-08 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 GH +v +la s+d+++lasG++++ ++iWd tr|C3Z2P5|C3Z2P5_BRAFL 132 QGHtAHVLCLAISSDNKFLASGCRNKIIHIWD 163 589777*************************9 PP == domain 3 score: 27.3 bits; conditional E-value: 7.1e-08 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 l+t+tGH + v +laf + + l+sGs D+tv++W+ tr|C3Z2P5|C3Z2P5_BRAFL 170 LHTFTGHrDAVAGLAFRKGTHTLFSGSHDKTVKVWS 205 8******888****************99*******5 PP == domain 4 score: 15.6 bits; conditional E-value: 0.00034 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 tl GH +s+ +l+ + +++G++D+tvr+W+ tr|C3Z2P5|C3Z2P5_BRAFL 214 TLFGHeDSIMALDSLARERAVTAGGRDRTVRVWK 247 5669*888**9965555555889**********6 PP == domain 5 score: 10.2 bits; conditional E-value: 0.017 EEESS..SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 6 tltGH..ssvtslafspdgawlasGsdDgtvriW 37 ++ G +s+ ++af +++ + sG+d+g+v +W tr|C3Z2P5|C3Z2P5_BRAFL 255 VFHGEnrGSIDCVAFINEQHIV-SGDDNGNVCVW 287 4555544459999888888886.8********** PP == domain 6 score: 20.1 bits; conditional E-value: 1.3e-05 S......EEEEEEETTSSEEEEEETTSEEEEE CS WD40 12 s......vtslafspdgawlasGsdDgtvriW 37 s v+++a +++++asGs Dg++r+W tr|C3Z2P5|C3Z2P5_BRAFL 307 SeqqecwVSAVAALTNSDLIASGSSDGHIRLW 338 14445569999999*********99******* PP == domain 7 score: 7.4 bits; conditional E-value: 0.13 SEEEEEEETTSSEEEEE CS WD40 12 svtslafspdgawlasG 28 +v++l+fs+dg++l+++ tr|C3Z2P5|C3Z2P5_BRAFL 358 FVNGLKFSSDGSFLVAA 374 49***********9875 PP >> tr|C3ZEY1|C3ZEY1_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_123636 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 28.6 0.0 2.7e-08 2.8e-06 5 37 .. 307 340 .. 303 341 .. 0.88 2 ? 8.6 0.0 0.056 5.9 6 38 .] 352 385 .. 348 385 .. 0.86 3 ! 29.0 0.2 2e-08 2e-06 3 38 .] 391 427 .. 389 427 .. 0.91 4 ! 11.4 0.3 0.0074 0.77 4 38 .] 434 469 .. 431 469 .. 0.72 5 ! 12.5 0.0 0.0032 0.33 7 38 .] 481 510 .. 476 510 .. 0.86 6 ! 17.5 0.0 8.6e-05 0.009 18 38 .] 520 540 .. 512 540 .. 0.89 7 ! 16.9 0.1 0.00013 0.014 4 38 .] 547 582 .. 544 582 .. 0.90 Alignments for each domain: == domain 1 score: 28.6 bits; conditional E-value: 2.7e-08 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriW 37 ++ +GH + v++++fsp+g+ +a+G+ D+++++W tr|C3ZEY1|C3ZEY1_BRAFL 307 HKADGHdGEVNAVRFSPSGRIVATGGTDRKLKLW 340 5557**666****************99******* PP == domain 2 score: 8.6 bits; conditional E-value: 0.056 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +ltG ++ s+ f+p ++++ +s D r+W+ tr|C3ZEY1|C3ZEY1_BRAFL 352 VLTGSnAGIMSVEFDPQENYILGASNDFASRVWS 385 68899666**************6699*******5 PP == domain 3 score: 29.0 bits; conditional E-value: 2e-08 EEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 + +tltGHs+ v + +f d++ ++sGs D+t++iWd tr|C3ZEY1|C3ZEY1_BRAFL 391 LRHTLTGHSGrVMAAKFLGDSSRVVSGSHDRTLKIWD 427 5699****445****************99*******9 PP == domain 4 score: 11.4 bits; conditional E-value: 0.0074 EEE.EESS..SS.E.EEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrt.ltGH..ss.v.tslafspdgawlasGsdDgtvriWd 38 +rt + G ++ v ++l +g+ ++sG+ D+ +r+Wd tr|C3ZEY1|C3ZEY1_BRAFL 434 IRTiFAGSscNDlVtSDL----SGTNIISGHFDKRIRFWD 469 555455664333665677....899999**99*******9 PP == domain 5 score: 12.5 bits; conditional E-value: 0.0032 EESSSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGHssvtslafspdgawlasGsdDgtvriWd 38 l G +tsl+ s d+++l+s+s+D ++++ d tr|C3ZEY1|C3ZEY1_BRAFL 481 LQGK--ITSLDLSLDNKYLLSCSRDDSLKLID 510 5555..9*********************9865 PP == domain 6 score: 17.5 bits; conditional E-value: 8.6e-05 EETTSSEEEEEETTSEEEEEE CS WD40 18 fspdgawlasGsdDgtvriWd 38 f+pd +++++Gs Dg++ iW+ tr|C3ZEY1|C3ZEY1_BRAFL 520 FCPDAQYVVAGSSDGSIFIWN 540 99*********99*******8 PP == domain 7 score: 16.9 bits; conditional E-value: 0.00013 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +tl+ H ssv +++++p+g +++s++++++v +W+ tr|C3ZEY1|C3ZEY1_BRAFL 547 EKTLKEHnSSVIACSWHPSGMMMVSCDKNKKVTLWS 582 6899***77788***********************5 PP >> tr|C3YJ60|C3YJ60_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_126885 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.3 0.0 0.016 1.7 6 38 .] 90 123 .. 86 123 .. 0.86 2 ? 4.3 0.0 1.2 1.3e+02 12 29 .. 141 158 .. 126 163 .. 0.77 3 ? 1.6 0.0 9.2 9.5e+02 13 33 .. 185 207 .. 173 212 .. 0.79 4 ! 14.4 0.0 0.00083 0.087 6 33 .. 221 249 .. 216 254 .. 0.78 5 ! 28.7 0.8 2.5e-08 2.6e-06 9 38 .] 271 301 .. 263 301 .. 0.92 6 ? 4.7 0.0 0.98 1e+02 18 38 .] 380 400 .. 363 400 .. 0.87 7 ! 11.3 0.0 0.0078 0.82 7 28 .. 414 433 .. 408 443 .. 0.78 8 ! 25.2 0.8 3.2e-07 3.3e-05 13 38 .] 463 488 .. 449 488 .. 0.89 9 ! 12.7 0.0 0.0028 0.29 9 38 .] 501 531 .. 494 531 .. 0.87 Alignments for each domain: == domain 1 score: 10.3 bits; conditional E-value: 0.016 EEESSSSE..EEEE.EETTSSEEEEEETTSEEEEEE CS WD40 6 tltGHssv..tsla.fspdgawlasGsdDgtvriWd 38 ++t H v t +a + p+g ++as+++ g+vriWd tr|C3YJ60|C3YJ60_BRAFL 90 VYTQH--VakTTVAkYAPSGFYIASADEHGKVRIWD 123 56777..666778889*******************9 PP == domain 2 score: 4.3 bits; conditional E-value: 1.2 SEEEEEEETTSSEEEEEE CS WD40 12 svtslafspdgawlasGs 29 ++ ++ +spd++ +a ++ tr|C3YJ60|C3YJ60_BRAFL 141 PIKDIVWSPDSKRIAICG 158 4999**********9776 PP == domain 3 score: 1.6 bits; conditional E-value: 9.2 E.EEEEEETTSSE.EEEEETTSE CS WD40 13 v.tslafspdgaw.lasGsdDgt 33 v +s+++ p ++ +++G+dD t tr|C3YJ60|C3YJ60_BRAFL 185 VaNSIDYRPTRPFrIIAGGDDST 207 55788888888898778*99987 PP == domain 4 score: 14.4 bits; conditional E-value: 0.00083 EEESS.SSEEEEEEETTSSEEEEEETTSE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgt 33 +l H +v++++fspdg ++s + Dg+ tr|C3YJ60|C3YJ60_BRAFL 221 SLAEHtRFVNCVRFSPDGERFVSVGADGK 249 56679656************998777997 PP == domain 5 score: 28.7 bits; conditional E-value: 2.5e-08 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 +H ++++++++spd++ l+++s D+tv++Wd tr|C3YJ60|C3YJ60_BRAFL 271 AHgGGIYGCSWSPDSTQLITCSGDKTVKLWD 301 79777**************9988*******9 PP == domain 6 score: 4.7 bits; conditional E-value: 0.98 EETTSSEEEEEETTSEEEEEE CS WD40 18 fspdgawlasGsdDgtvriWd 38 ++p+++ ++ G++D+++++++ tr|C3YJ60|C3YJ60_BRAFL 380 VHPNQTQVMVGGKDKKLYVYN 400 6999999999********997 PP == domain 7 score: 11.3 bits; conditional E-value: 0.0078 EESSSSEEEEEEETTSSEEEEE CS WD40 7 ltGHssvtslafspdgawlasG 28 l+G vt++afspdg++l+++ tr|C3YJ60|C3YJ60_BRAFL 414 LKGA--VTAFAFSPDGRYLSCA 433 6676..************9654 PP == domain 8 score: 25.2 bits; conditional E-value: 3.2e-07 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 vt++a++p+++ lasGs D ++ iWd tr|C3YJ60|C3YJ60_BRAFL 463 VTCVAWNPSSTHLASGSLDTNIVIWD 488 9************************9 PP == domain 9 score: 12.7 bits; conditional E-value: 0.0028 SS..SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH..ssvtslafspdgawlasGsdDgtvriWd 38 +H s + +l + d+++++ G+ D+ +r Wd tr|C3YJ60|C3YJ60_BRAFL 501 AHpiSQIVGLEWLTDNKLISVGT-DNAIRQWD 531 676666889*9********9999.*******9 PP >> tr|C3YRI5|C3YRI5_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_75619 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 4.2 0.0 1.4 1.4e+02 14 38 .] 28 52 .. 11 52 .. 0.81 2 ! 14.0 0.1 0.0011 0.12 5 37 .. 60 93 .. 56 94 .. 0.84 3 ! 29.8 0.0 1.1e-08 1.2e-06 2 38 .] 98 135 .. 97 135 .. 0.92 4 ! 17.0 1.4 0.00013 0.013 5 32 .. 143 171 .. 139 179 .. 0.86 5 ! 27.9 0.0 4.4e-08 4.5e-06 1 38 [] 183 221 .. 183 221 .. 0.93 6 ! 16.1 0.0 0.00024 0.025 3 37 .. 227 263 .. 225 264 .. 0.86 7 ! 13.4 0.3 0.0017 0.18 9 33 .. 277 302 .. 271 303 .] 0.88 Alignments for each domain: == domain 1 score: 4.2 bits; conditional E-value: 1.4 EEEEEETTSSEEEEEETTSEEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriWd 38 +++ p+g+ l++G g +W+ tr|C3YRI5|C3YRI5_BRAFL 28 FVVRWTPEGRRLVTGASSGEFTLWN 52 4577***********5599999997 PP == domain 2 score: 14.0 bits; conditional E-value: 0.0011 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriW 37 ++l +H + v+++++s++ +w+++++ g v+ W tr|C3YRI5|C3YRI5_BRAFL 60 TILQAHdTAVRAMSWSHNDQWMVTADHAGFVKYW 93 5789**777**************99768888877 PP == domain 3 score: 29.8 bits; conditional E-value: 1.1e-08 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++++ + +H v+ ++f+p + +a++sdD tvriWd tr|C3YRI5|C3YRI5_BRAFL 98 NNVKMFQAHkEAVREVSFCPTDNKFATCSDDSTVRIWD 135 68899****666*************************9 PP == domain 4 score: 17.0 bits; conditional E-value: 0.00013 EEEESS.SSEEEEEEETTSSEEEEEETTS CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDg 32 r+++GH +v ++++p + +lasGs+D tr|C3YRI5|C3YRI5_BRAFL 143 RICRGHgADVKTVDWHPQKGLLASGSKDS 171 789***888****************9874 PP == domain 5 score: 27.9 bits; conditional E-value: 4.4e-08 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 gq l tl +H s v ++f+++g+wl+++s+D+ v+++d tr|C3YRI5|C3YRI5_BRAFL 183 GQSLATLHAHkSTVMEVKFNQNGNWLLTASRDHLVKVFD 221 68899*****666************************98 PP == domain 6 score: 16.1 bits; conditional E-value: 0.00024 EEEEEESS.SSEEEEEEETTSSEE.EEEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawl.asGsdDgtvriW 37 +++++GH + t++a++p + l asG+ g++ +W tr|C3YRI5|C3YRI5_BRAFL 227 EMQSFRGHkKEATAVAWHPIHESLfASGGSEGSILFW 263 5789****888****999999998468877******* PP == domain 7 score: 13.4 bits; conditional E-value: 0.0017 SSSS.EEEEEEETTSSEEEEEETTSE CS WD40 9 GHss.vtslafspdgawlasGsdDgt 33 +H + ++sla++p g+ l+sGs D++ tr|C3YRI5|C3YRI5_BRAFL 277 AHEGmIWSLAWHPLGHILCSGSNDHS 302 68556*****************9986 PP >> tr|C3Y795|C3Y795_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_82840 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 7.5 0.0 0.12 13 5 33 .. 9 41 .. 5 44 .. 0.79 2 ! 14.2 0.2 0.00092 0.096 4 38 .] 53 88 .. 50 88 .. 0.90 3 ! 15.5 0.0 0.00036 0.038 4 38 .] 95 129 .. 92 129 .. 0.86 4 ! 31.9 0.0 2.4e-09 2.5e-07 6 38 .] 139 172 .. 137 172 .. 0.95 5 ! 39.5 0.0 9.4e-12 9.7e-10 2 37 .. 258 294 .. 257 295 .. 0.92 Alignments for each domain: == domain 1 score: 7.5 bits; conditional E-value: 0.12 EEEESS.SSEEEEE...EETTSSEEEEEETTSE CS WD40 5 rtltGH.ssvtsla...fspdgawlasGsdDgt 33 +++GH +v la p+g +l+s+++Dg+ tr|C3Y795|C3Y795_BRAFL 9 LSCSGHtRPVVKLAfsrLTPYGYFLISACKDGK 41 5789**777989996677788888999999996 PP == domain 2 score: 14.2 bits; conditional E-value: 0.00092 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++t+ GH + v++ + d + a+G D t ++Wd tr|C3Y795|C3Y795_BRAFL 53 IGTFLGHkGAVWGATLNEDATRAATGAADFTAKVWD 88 67999**655****************99*******9 PP == domain 3 score: 15.5 bits; conditional E-value: 0.00036 EEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 + t++ H++ v s++fs+d++ l++G+ + ++i+d tr|C3Y795|C3Y795_BRAFL 95 TATFS-HKHiVKSVDFSKDSNQLLTGGNEKLLKIFD 129 66775.98857****************9**999998 PP == domain 4 score: 31.9 bits; conditional E-value: 2.4e-09 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++tGH + v + f pdg+ l+sG+dD+t+r+Wd tr|C3Y795|C3Y795_BRAFL 139 VFTGHtNYVKDALFLPDGKRLVSGGDDKTIRMWD 172 699**888*************************9 PP == domain 5 score: 39.5 bits; conditional E-value: 9.4e-12 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 + l +++GH ++v++++fspdg + asGs+Dgt+r+W tr|C3Y795|C3Y795_BRAFL 258 SELESYKGHfGPVHCVRFSPDGELYASGSEDGTLRLW 294 56789****888************************* PP >> tr|C3YVN0|C3YVN0_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_121774 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 20.7 0.0 8.1e-06 0.00084 2 37 .. 258 294 .. 257 294 .. 0.94 2 ! 13.8 0.1 0.0013 0.14 1 32 [. 299 331 .. 299 332 .. 0.91 3 ! 17.0 0.1 0.00013 0.013 12 38 .] 355 381 .. 341 381 .. 0.85 4 ! 31.1 0.0 4.4e-09 4.6e-07 3 38 .] 387 423 .. 385 423 .. 0.92 5 ? 6.6 0.0 0.24 25 13 31 .. 445 463 .. 435 468 .. 0.85 6 ! 18.2 0.0 5.3e-05 0.0055 2 37 .. 473 509 .. 472 509 .. 0.90 Alignments for each domain: == domain 1 score: 20.7 bits; conditional E-value: 8.1e-06 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 q + +l+GH + v+ + ++p+ ++++++s D t+r+W tr|C3YVN0|C3YVN0_BRAFL 258 QVVCILKGHrQKVNNVLYHPSENLVFTASPDSTIRVW 294 667899***988************************* PP == domain 2 score: 13.8 bits; conditional E-value: 0.0013 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTS CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDg 32 gqc ++ +H + vt+++ + g++l+s+s+D+ tr|C3YVN0|C3YVN0_BRAFL 299 GQCSNIIQAHdGAVTGISLHATGDFLLSASEDQ 331 79999*****666*****************995 PP == domain 3 score: 17.0 bits; conditional E-value: 0.00013 SEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriWd 38 s t+ +f+pdg + +G+dD v+iWd tr|C3YVN0|C3YVN0_BRAFL 355 SLTCAQFHPDGLIFGTGTDDSQVKIWD 381 489999*******87999********9 PP == domain 4 score: 31.1 bits; conditional E-value: 4.4e-09 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++ + GH +++t++afs +g +la++ dD v++Wd tr|C3YVN0|C3YVN0_BRAFL 387 NVANFPGHsGPITAIAFSENGYYLATAADDSMVKLWD 423 67889***777****************99*******9 PP == domain 5 score: 6.6 bits; conditional E-value: 0.24 EEEEEEETTSSEEE.EEETT CS WD40 13 vtslafspdgawla.sGsdD 31 + sl+f+++g++la +Gs D tr|C3YVN0|C3YVN0_BRAFL 445 IKSLCFDQSGTYLAvAGS-D 463 889*********985777.6 PP == domain 6 score: 18.2 bits; conditional E-value: 5.3e-05 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 q l + + H +vts++f + a+las s+D++++i+ tr|C3YVN0|C3YVN0_BRAFL 473 QELVVMKEHtAPVTSIKFGNHAAFLASTSMDRSLKIY 509 66778899*888**************9999*****97 PP >> tr|C3ZY33|C3ZY33_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_131394 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 8.6 0.0 0.054 5.6 13 36 .. 112 135 .. 100 137 .. 0.76 2 ! 20.3 0.0 1.1e-05 0.0012 4 38 .] 167 205 .. 165 205 .. 0.88 3 ! 16.0 0.0 0.00026 0.027 12 38 .] 222 249 .. 213 249 .. 0.88 4 ! 22.9 0.1 1.7e-06 0.00018 9 38 .] 264 294 .. 253 294 .. 0.86 5 ! 24.0 0.0 7.4e-07 7.7e-05 2 37 .. 299 337 .. 298 338 .. 0.89 6 ! 16.3 0.0 0.00021 0.022 5 37 .. 395 427 .. 390 427 .. 0.86 Alignments for each domain: == domain 1 score: 8.6 bits; conditional E-value: 0.054 EEEEEEETTSSEEEEEETTSEEEE CS WD40 13 vtslafspdgawlasGsdDgtvri 36 ++ af dg+++a+Gs D ++++ tr|C3ZY33|C3ZY33_BRAFL 112 CRASAFTCDGQLIATGSVDASIKV 135 34445999**************98 PP == domain 2 score: 20.3 bits; conditional E-value: 1.1e-05 EEEEESS.SSEEEEEEETTSSE...EEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgaw...lasGsdDgtvriWd 38 +rtl H vt+l+++p + lasGs+D tv+++d tr|C3ZY33|C3ZY33_BRAFL 167 IRTLYDHiEEVTCLDYHPQYPNvqlLASGSKDYTVKFFD 205 688999*999*****888888877679*********998 PP == domain 3 score: 16.0 bits; conditional E-value: 0.00026 S.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 s.vtslafspdgawlasGsdDgtvriWd 38 + v++l+f+p+g++++ G+ +t+r++d tr|C3ZY33|C3ZY33_BRAFL 222 DvVRCLSFHPSGDFILVGTQHPTLRLYD 249 347***********************98 PP == domain 4 score: 22.9 bits; conditional E-value: 1.7e-06 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 H ++++++sp+ ++ +s+s+Dg +++Wd tr|C3ZY33|C3ZY33_BRAFL 264 QHkAAISAVKYSPNANLYVSCSKDGDIKVWD 294 58555************99***********9 PP == domain 5 score: 24.0 bits; conditional E-value: 7.4e-07 EEEEEEE.SSSS..EEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtlt.GHss..vtslafspdgawlasGsdDgtvriW 37 +c+ t+t +H++ v+s+ fs+++++++s+++D v++W tr|C3ZY33|C3ZY33_BRAFL 299 RCIATYTrAHDGeeVSSVVFSRNSKYILSSGKDSLVKLW 337 69999976**4458************************* PP == domain 6 score: 16.3 bits; conditional E-value: 0.00021 EEEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 5 rtltGHss.vtslafspdgawlasGsdDgtvriW 37 +l GH++ v+s+ sp g+ ++++sdD r+W tr|C3ZY33|C3ZY33_BRAFL 395 LSL-GHNNvVRSIVHSPTGPAFVTCSDDYRARFW 427 444.9*7757************************ PP >> tr|C3XWD4|C3XWD4_BRAFL Coronin OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_117106 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 23.6 0.1 1e-06 0.00011 7 37 .. 77 113 .. 72 114 .. 0.91 2 ! 11.5 0.0 0.0067 0.7 13 38 .] 137 162 .. 125 162 .. 0.82 3 ! 15.7 0.0 0.00031 0.032 5 36 .. 170 202 .. 166 204 .. 0.90 4 ? 1.7 0.1 8.4 8.7e+02 2 35 .. 209 247 .. 208 250 .. 0.72 5 ? 4.7 0.1 0.96 1e+02 12 37 .. 504 529 .. 494 530 .. 0.81 6 ! 19.1 0.0 2.6e-05 0.0027 5 38 .] 545 580 .. 541 580 .. 0.84 7 ! 34.0 0.0 5.2e-10 5.4e-08 2 38 .] 585 622 .. 584 622 .. 0.91 Alignments for each domain: == domain 1 score: 23.6 bits; conditional E-value: 1e-06 EESS.SSEEEEEEETTSSE.....EEEEETTSEEEEE CS WD40 7 ltGH.ssvtslafspdgaw.....lasGsdDgtvriW 37 l +H +svt+++fsp a+ la+Gs D++v++W tr|C3XWD4|C3XWD4_BRAFL 77 LHAHaDSVTDFDFSPFDAFsetslLATGSQDCSVKLW 113 459*888****************999*********** PP == domain 2 score: 11.5 bits; conditional E-value: 0.0067 EEEEEEETTSSEEEEE.ETTSEEEEEE CS WD40 13 vtslafspdgawlasG.sdDgtvriWd 38 v + ++p ++ G s D++vriWd tr|C3XWD4|C3XWD4_BRAFL 137 VETVLWHPTAENIL-GfSSDRSVRIWD 162 667779******99.8856*******9 PP == domain 3 score: 15.7 bits; conditional E-value: 0.00031 EEEESSSS.EEEEEEETTSSEEEEEETTSEEEE CS WD40 5 rtltGHss.vtslafspdgawlasGsdDgtvri 36 ++l+ H++ v s+++ dg++la++++D+++r+ tr|C3XWD4|C3XWD4_BRAFL 170 YVLEDHNDlVQSFSWKEDGSLLATSCKDKKIRV 202 67899*8889**********************8 PP == domain 4 score: 1.7 bits; conditional E-value: 8.4 EEEEEEESSSSE..EEEEEETTSSEEEE.E.ET.TSEEE CS WD40 2 qclrtltGHssv..tslafspdgawlas.G.sd.Dgtvr 35 +++++ +GH++v + + + d+++l+s G s+ D vr tr|C3XWD4|C3XWD4_BRAFL 209 STVQSGDGHQNVrdSRVLWLGDKDMLLSvGfSKgDSVVR 247 5678889**88*666887999999998624532377776 PP == domain 5 score: 4.7 bits; conditional E-value: 0.96 SEEEEEEETTSSE.EEEEETTSEEEEE CS WD40 12 svtslafspdgaw.lasGsdDgtvriW 37 v +++++p ++ la + D t+ iW tr|C3XWD4|C3XWD4_BRAFL 504 TVMDFCWDPFNKRrLAVAA-DATINIW 529 3899999999999887778.******* PP == domain 6 score: 19.1 bits; conditional E-value: 2.6e-05 EEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 l+GH +++++f+p + ++ s+s D +vr+Wd tr|C3XWD4|C3XWD4_BRAFL 545 FCLRGHeEKIYCMKFHPTASDIMaSASFDMSVRVWD 580 5689**766*****99999998526689*******9 PP == domain 7 score: 34.0 bits; conditional E-value: 5.2e-10 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 q++ +l+GH + + sla+spdg++la+ ++Dg++ri++ tr|C3XWD4|C3XWD4_BRAFL 585 QQVFKLRGHtDQIFSLAWSPDGQYLATVCKDGSIRIYN 622 678899***666***************9********98 PP >> tr|C3ZKU5|C3ZKU5_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_125722 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 7.0 0.1 0.17 18 13 31 .. 221 239 .. 205 240 .. 0.74 2 ! 19.1 0.0 2.7e-05 0.0028 3 38 .] 241 277 .. 239 277 .. 0.87 3 ! 14.0 0.1 0.0011 0.11 5 38 .] 285 319 .. 281 319 .. 0.88 4 ! 30.4 0.0 6.9e-09 7.2e-07 1 38 [] 323 361 .. 323 361 .. 0.97 5 ! 17.5 0.0 8.9e-05 0.0092 1 37 [. 365 403 .. 365 403 .. 0.91 6 ! 24.3 0.0 6.3e-07 6.6e-05 1 37 [. 408 445 .. 408 445 .. 0.94 Alignments for each domain: == domain 1 score: 7.0 bits; conditional E-value: 0.17 EEEEEEETTSSEEEEEETT CS WD40 13 vtslafspdgawlasGsdD 31 ++ ++fsp++++la++s D tr|C3ZKU5|C3ZKU5_BRAFL 221 ISFCQFSPNSKLLATSSCD 239 75666*********98755 PP == domain 2 score: 19.1 bits; conditional E-value: 2.7e-05 EEEEEESS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawl.asGsdDgtvriWd 38 ++ ++GH v +a++p+g++l +++ D++ r+Wd tr|C3ZKU5|C3ZKU5_BRAFL 241 PVANIEGHeARVARVAYHPSGRFLgTTCY-DKSWRLWD 277 677789**777************966667.*******9 PP == domain 3 score: 14.0 bits; conditional E-value: 0.0011 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + +GH + v++++f+ dg++ a+++ D r+Wd tr|C3ZKU5|C3ZKU5_BRAFL 285 LHQEGHsKEVYDISFQCDGSLCATCGLDAFGRVWD 319 5568**888****************99*9999998 PP == domain 4 score: 30.4 bits; conditional E-value: 6.9e-09 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+c+ l+GH + ++ fspdg +a+Gs D+t ++Wd tr|C3ZKU5|C3ZKU5_BRAFL 323 GRCVMFLEGHlKELFAITFSPDGYHVATGSADNTAKVWD 361 6899**********************************9 PP == domain 5 score: 17.5 bits; conditional E-value: 8.9e-05 TEEEEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGH.ssvtsla.fspdgawlasGsdDgtvriW 37 ++c++t+ GH + v++l+ ++g++l+++s D+t ++W tr|C3ZKU5|C3ZKU5_BRAFL 365 RKCVYTIPGHtNLVSGLKyQGSEGQYLVTASFDCTAKVW 403 58********555****999999999**9*99******* PP == domain 6 score: 24.3 bits; conditional E-value: 6.3e-07 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +++l+tl GH + ++++spd++++a++s+D+t ++W tr|C3ZKU5|C3ZKU5_BRAFL 408 WSPLKTLAGHeGKLMAVDVSPDSKFIATSSYDRTYKLW 445 6799******77799**********************9 PP >> tr|C3XW75|C3XW75_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_56820 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 13.9 0.1 0.0012 0.12 6 37 .. 54 87 .. 49 88 .. 0.79 2 ! 20.3 0.1 1.2e-05 0.0012 5 38 .] 366 400 .. 362 400 .. 0.84 3 ! 11.0 0.4 0.0099 1 3 36 .. 449 485 .. 447 485 .. 0.74 4 ? 7.9 0.0 0.092 9.6 2 37 .. 491 527 .. 490 527 .. 0.72 5 ! 31.5 0.4 3.3e-09 3.4e-07 2 38 .] 535 573 .. 534 573 .. 0.84 6 ! 26.7 0.1 1.1e-07 1.1e-05 3 38 .] 579 616 .. 577 616 .. 0.90 7 ! 16.8 0.4 0.00014 0.015 2 38 .] 621 659 .. 620 659 .. 0.89 Alignments for each domain: == domain 1 score: 13.9 bits; conditional E-value: 0.0012 EEESS.SSEEEEEEETTSSE.EEEEETTSEEEEE CS WD40 6 tltGH.ssvtslafspdgaw.lasGsdDgtvriW 37 + + H + +t++a++p ++ las+s D+ + iW tr|C3XW75|C3XW75_BRAFL 54 IMSEHtKTITAMAWHPRNPDiLASASADQRICIW 87 4689*999****977777773567899******* PP == domain 2 score: 20.3 bits; conditional E-value: 1.2e-05 EEEESS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawl.asGsdDgtvriWd 38 r l GH + +++f pd + l a++s Dgt+++Wd tr|C3XW75|C3XW75_BRAFL 366 RDL-GHiETIFDCKFKPDDPNLlATASFDGTIKVWD 400 555.9*999************7368899*******9 PP == domain 3 score: 11.0 bits; conditional E-value: 0.0099 EEEEEESS..SSEEEEE.EETTSSEEEEEETTSEEEE CS WD40 3 clrtltGH..ssvtsla.fspdgawlasGsdDgtvri 36 ++ + H s+ ++a +++d++ +a+++ Dg++ i tr|C3XW75|C3XW75_BRAFL 449 VIKRFNEHgrHSIFCVAwNNKDSRRIATCGSDGHCVI 485 566677785335****977777777998866***976 PP == domain 4 score: 7.9 bits; conditional E-value: 0.092 EEEEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtsla.fspdgawlasGsdDgtvriW 37 +++++++ H +v +++ ++++la+G++D++vr++ tr|C3XW75|C3XW75_BRAFL 491 KLVKKYK-HpMPVFGCDwSLTNKDMLATGCEDKNVRVF 527 5667776.755588885444555669**********95 PP == domain 5 score: 31.5 bits; conditional E-value: 3.3e-09 EEEEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 q+l++++GH s v ++++sp l+sGsdDgt+riWd tr|C3XW75|C3XW75_BRAFL 535 QPLKIFSGHtSKVFHVKWSPLREGiLCSGSDDGTIRIWD 573 799******777****7666666655689*********9 PP == domain 6 score: 26.7 bits; conditional E-value: 1.1e-07 EEEEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 c +l+GH +v++l ++p+ ++l+ sGs+D t+r+Wd tr|C3XW75|C3XW75_BRAFL 579 CAMVLSGHtAPVRGLLWNPEIPYLLlSGSWDYTIRVWD 616 7789****888****99999999755***********9 PP == domain 7 score: 16.8 bits; conditional E-value: 0.00014 EEEEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 c+ t H +v++l +p ++ +as+s+D tvriW+ tr|C3XW75|C3XW75_BRAFL 621 ACIDTVYDHgADVYGLTCHPLRPFtVASCSRDSTVRIWS 659 68888889*888****99999999999***********5 PP >> tr|C3ZDE2|C3ZDE2_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_206700 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 13.5 0.0 0.0016 0.17 3 37 .. 49 89 .. 47 90 .. 0.72 2 ! 14.0 0.0 0.0011 0.12 3 37 .. 98 141 .. 96 142 .. 0.64 3 ? 1.6 1.6 9.1 9.5e+02 14 37 .. 173 190 .. 145 191 .. 0.65 4 ! 19.2 0.0 2.4e-05 0.0025 3 38 .] 199 238 .. 197 238 .. 0.81 5 ? 10.6 0.0 0.013 1.4 6 38 .] 278 320 .. 274 320 .. 0.77 6 ? 3.2 0.0 2.7 2.8e+02 15 37 .. 346 368 .. 333 369 .. 0.79 7 ? 8.1 0.0 0.079 8.3 4 36 .. 382 416 .. 379 418 .. 0.78 8 ? 5.3 0.0 0.63 66 10 38 .] 438 466 .. 431 466 .. 0.79 9 ? 4.1 0.0 1.5 1.6e+02 5 29 .. 562 587 .. 558 601 .. 0.76 10 ! 13.4 0.1 0.0016 0.17 2 33 .. 606 638 .. 605 642 .. 0.86 11 ! 16.2 2.7 0.00022 0.023 8 37 .. 667 697 .. 662 697 .. 0.88 12 ? 10.2 0.0 0.018 1.9 9 38 .] 778 819 .. 766 819 .. 0.74 Alignments for each domain: == domain 1 score: 13.5 bits; conditional E-value: 0.0016 EEEEEESS.SSEEEEEEETTSSE.....EEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw.....lasGsdDgtvriW 37 l tl+ H vt++++ p g+ ++ Gs D++ +W tr|C3ZDE2|C3ZDE2_BRAFL 49 VLETLSQHtAKVTCVRWIPKGNGepsdeFVVGSADKSASLW 89 677999**666****8444444466666445*99******* PP == domain 2 score: 14.0 bits; conditional E-value: 0.0011 EEEEEESSSS...EEEEE....EETTSSE......EEEEETTSEEEEE CS WD40 3 clrtltGHss...vtsla....fspdgaw......lasGsdDgtvriW 37 + +l+GHs +t + l+++s D tvriW tr|C3ZDE2|C3ZDE2_BRAFL 98 VVSVLRGHSAavtITEAMyvptSN----KdefwtlLVTSSVDSTVRIW 141 577899994454444332455333....2333587899********** PP == domain 3 score: 1.6 bits; conditional E-value: 9.1 EEEEEETTSSEEEEEE.TTSEEEEE CS WD40 14 tslafspdgawlasGs.dDgtvriW 37 ts+ + la ++ dD +++W tr|C3ZDE2|C3ZDE2_BRAFL 173 TSV------PILA-CGwDDDRIHLW 190 445......5576.5533*999999 PP == domain 4 score: 19.2 bits; conditional E-value: 2.4e-05 EEEEEESS.SSEEEEE..EETTSSE.EEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtsla..fspdgaw.lasGsdDgtvriWd 38 + tl+GH ++v+++ +++g++ las++ D+ +r+W+ tr|C3ZDE2|C3ZDE2_BRAFL 199 EVATLKGHeDWVRGVEftANDEGDLlLASCGQDCFIRVWK 238 6789****888****877666666646799*********6 PP == domain 5 score: 10.6 bits; conditional E-value: 0.013 EEESS.SSEEEEEEETTSSE...............EEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgaw...............lasGsdDgtvriWd 38 +l GH ++++++ w l+s+s+D+t +W+ tr|C3ZDE2|C3ZDE2_BRAFL 278 VLAGHeNWIYGVH------WqpavfndgsrhqplsLLSASMDKTMILWK 320 678**999****5......5555555555568889889999*******6 PP == domain 6 score: 3.2 bits; conditional E-value: 2.7 EEEEETTSSEEEE.EETTSEEEEE CS WD40 15 slafspdgawlas.GsdDgtvriW 37 +++fspdg+ +++ G g +++W tr|C3ZDE2|C3ZDE2_BRAFL 346 GCQFSPDGQSIIAhGF-QGALHLW 368 567*******985455.9999999 PP == domain 7 score: 8.1 bits; conditional E-value: 0.079 EEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEE CS WD40 4 lrtltGH.ssvtslafspdgaw.lasGsdDgtvri 36 t GH ++v ++a++p g l+s s D+t r+ tr|C3ZDE2|C3ZDE2_BRAFL 382 GVTVGGHfDGVEDIAWDPAGGEfLLSVSLDRTTRL 416 55788**777****988888774568888999887 PP == domain 8 score: 5.3 bits; conditional E-value: 0.63 SSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 Hss.vtslafspdgawlasGsdDgtvriWd 38 H+ +++la + +++ sG+d + +r++d tr|C3ZDE2|C3ZDE2_BRAFL 438 HGYaINCLAMVSRYQFV-SGGDEKVLRVFD 466 52249***877777886.8**9*****998 PP == domain 9 score: 4.1 bits; conditional E-value: 1.5 EEEESSSS.EEEEEEETTSSEEEEEE CS WD40 5 rtltGHss.vtslafspdgawlasGs 29 ++l GH+ ++a ++ g+++as++ tr|C3ZDE2|C3ZDE2_BRAFL 562 QKLYGHGYeLFCVACNRQGTLVASAC 587 6678**4469************9875 PP == domain 10 score: 13.4 bits; conditional E-value: 0.0016 EEEEEEESSSS..EEEEEEETTSSEEEEEETTSE CS WD40 2 qclrtltGHss..vtslafspdgawlasGsdDgt 33 +++++l+ H s vt l+fs++g++l+s s+D+t tr|C3ZDE2|C3ZDE2_BRAFL 606 RQVGHLENH-SltVTQLRFSHSGDMLLSVSRDRT 638 567888888.457**************99***98 PP == domain 11 score: 16.2 bits; conditional E-value: 0.00022 ESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 8 tGHss.vtslafspdgawlasGsdDgtvriW 37 + H+ ++++++s+d ++++++s+D++v +W tr|C3ZDE2|C3ZDE2_BRAFL 667 SVHTRiIWGCSWSHDDNYFVTASRDKKVVVW 697 4685557************************ PP == domain 12 score: 10.2 bits; conditional E-value: 0.018 SS.SSEEEEEEETTSSE.................EEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgaw.................lasGsdDgtvriWd 38 GH v+ l aw las++dD tvri++ tr|C3ZDE2|C3ZDE2_BRAFL 778 GHcLAVRRL------AWrpttgnteseernkylqLASCGDDFTVRIFN 819 884448889......44444444888888888899***********97 PP >> tr|C3Z098|C3Z098_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_79824 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 6.2 0.1 0.31 32 7 37 .. 75 107 .. 72 108 .. 0.84 2 ! 25.6 0.1 2.4e-07 2.5e-05 2 38 .] 113 150 .. 112 150 .. 0.91 3 ? 3.9 0.4 1.7 1.8e+02 16 38 .] 168 190 .. 155 190 .. 0.74 4 ! 18.4 0.1 4.3e-05 0.0045 5 38 .] 197 231 .. 195 231 .. 0.82 5 ! 30.0 0.7 9.5e-09 9.9e-07 3 38 .] 237 276 .. 235 276 .. 0.89 6 ? 5.8 0.0 0.42 43 11 38 .] 299 326 .. 280 326 .. 0.80 7 ! 13.9 0.2 0.0012 0.13 8 38 .] 336 367 .. 330 367 .. 0.85 8 ! 20.2 0.0 1.2e-05 0.0012 4 38 .] 374 409 .. 371 409 .. 0.86 Alignments for each domain: == domain 1 score: 6.2 bits; conditional E-value: 0.31 EESS.SSEEEEEEETTSSEEE.EEETTSEEEEE CS WD40 7 ltGH.ssvtslafspdgawla.sGsdDgtvriW 37 ++ H +sv ++ ++ + la +G++D + ++W tr|C3Z098|C3Z098_BRAFL 75 FSKHiGSVFCIGLDRTTQSLAvTGGEDDKAYVW 107 77799999999888888888669********** PP == domain 2 score: 25.6 bits; conditional E-value: 2.4e-07 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + l ++ GH +svt+ +fs+++a++a+G++ g v+ Wd tr|C3Z098|C3Z098_BRAFL 113 EVLMECGGHkDSVTCACFSHNSALVATGDMGGLVKAWD 150 5678899**777****************99*******9 PP == domain 3 score: 3.9 bits; conditional E-value: 1.7 EEEETTSSEEEEEETTSEEEEEE CS WD40 16 lafspdgawlasGsdDgtvriWd 38 l+++ + l++G+ Dg v +W+ tr|C3Z098|C3Z098_BRAFL 168 LDWHMAAPVLFAGTVDGDVWMWK 190 335555566899**********6 PP == domain 4 score: 18.4 bits; conditional E-value: 4.3e-05 EEEESSSSEEEEE....EETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGHssvtsla....fspdgawlasGsdDgtvriWd 38 +t+ GH + +++ + pdg+ l+ G +Dgtv++Wd tr|C3Z098|C3Z098_BRAFL 197 KTFQGH-G--CQStagkVMPDGKRLSVGYEDGTVKVWD 231 688999.3..33344669*******************9 PP == domain 5 score: 30.0 bits; conditional E-value: 9.5e-09 EEEEEESS.SS...EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ss...vtslafspdgawlasGsdDgtvriWd 38 l+t+ GH ++ vt+++ ++d+ +++sG Dgt riW+ tr|C3Z098|C3Z098_BRAFL 237 ALHTFAGHqGHtgaVTCMDCHHDNVLVMSGATDGTARIWN 276 58999999655778****************88*******8 PP == domain 6 score: 5.8 bits; conditional E-value: 0.42 SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriWd 38 +sv ++ s ++++ a Gs +gt+ +Wd tr|C3Z098|C3Z098_BRAFL 299 NSVEAVGLSNSQPLAAVGSLNGTLGVWD 326 348888889999**99***********9 PP == domain 7 score: 13.9 bits; conditional E-value: 0.0012 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 H +++ la+ +g +l +++ Dg riWd tr|C3Z098|C3Z098_BRAFL 336 CSHpGGIVRLAWAESGYLLYTSCLDGVTRIWD 367 35877899************9999*******9 PP == domain 8 score: 20.2 bits; conditional E-value: 1.2e-05 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++ ltGH + ++a+s+dg+ ++++s D+t r+++ tr|C3Z098|C3Z098_BRAFL 374 VQQLTGHsEEILDMAVSRDGNVVLTSSGDNTARVFN 409 7789***555************998877*****997 PP >> tr|C3ZTF5|C3ZTF5_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_68833 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 7.6 0.0 0.12 12 13 36 .. 4 27 .. 2 28 .. 0.91 2 ! 26.9 0.1 9.4e-08 9.8e-06 9 36 .. 54 82 .. 45 83 .. 0.88 3 ! 21.6 0.2 4.3e-06 0.00045 2 38 .] 141 177 .. 140 177 .. 0.76 4 ! 20.8 0.0 7.9e-06 0.00083 11 38 .] 199 226 .. 182 226 .. 0.85 5 ! 21.6 0.0 4.5e-06 0.00047 3 38 .] 232 268 .. 230 268 .. 0.90 6 ? 10.8 0.1 0.011 1.2 4 37 .. 279 313 .. 273 313 .. 0.80 Alignments for each domain: == domain 1 score: 7.6 bits; conditional E-value: 0.12 EEEEEEETTSSEEEEEETTSEEEE CS WD40 13 vtslafspdgawlasGsdDgtvri 36 ++++af+p+ga+ a Gs +t+r+ tr|C3ZTF5|C3ZTF5_BRAFL 4 IRAVAFHPSGALYAIGSNSKTLRV 27 899*********999**9999997 PP == domain 2 score: 26.9 bits; conditional E-value: 9.4e-08 SS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvri 36 H +s++++a+sp g+++a+Gs D+ v++ tr|C3ZTF5|C3ZTF5_BRAFL 54 HHkGSIYCIAWSPTGNLIATGSNDKCVKV 82 57666**********************97 PP == domain 3 score: 21.6 bits; conditional E-value: 4.3e-06 EEEEEEESS.SSEEEEEEETTSSE....EEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw....lasGsdDgtvriWd 38 + l+ l GH ++v l aw lasG D+t+r+Wd tr|C3ZTF5|C3ZTF5_BRAFL 141 EGLHALAGHtGHVLTL-----YAWggclLASGAQDKTIRLWD 177 5688999998889766.....33333339************9 PP == domain 4 score: 20.8 bits; conditional E-value: 7.9e-06 SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriWd 38 s+v s++++p+g++lasG++D++++++d tr|C3ZTF5|C3ZTF5_BRAFL 199 SPVASVCVDPSGRLLASGHEDNSCMLYD 226 45999*********************98 PP == domain 5 score: 21.6 bits; conditional E-value: 4.5e-06 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++ ++ H ++v+s +fsp+ l++Gs+D++++i d tr|C3ZTF5|C3ZTF5_BRAFL 232 VVQAFKPHtNDVRSTRFSPNAYHLLTGSYDHSIKIID 268 5677999*999***********************966 PP == domain 6 score: 10.8 bits; conditional E-value: 0.011 EEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGHss.vtslafspdgawlasGsdDgtvriW 37 ++t +H++ v ++++p + ++s s D+tv +W tr|C3ZTF5|C3ZTF5_BRAFL 279 VTTVATHKDkVIQCRWHPTENAFLSTSADRTVTLW 313 5566689566668889999999888888******9 PP >> tr|C3Z5L8|C3Z5L8_BRAFL Ribosome biogenesis protein WDR12 homolog OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_113 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.1 0.3 0.038 4 12 37 .. 109 132 .. 101 133 .. 0.75 2 ! 12.0 0.0 0.0046 0.48 3 38 .] 138 177 .. 136 177 .. 0.75 3 ! 25.2 0.4 3.1e-07 3.3e-05 6 38 .] 190 223 .. 186 223 .. 0.91 4 ! 23.9 1.1 8.4e-07 8.8e-05 2 38 .] 252 288 .. 251 288 .. 0.86 5 ! 21.4 0.1 5.1e-06 0.00053 6 38 .] 297 329 .. 292 329 .. 0.88 6 ! 30.5 0.2 6.7e-09 6.9e-07 5 38 .] 340 375 .. 338 375 .. 0.88 Alignments for each domain: == domain 1 score: 9.1 bits; conditional E-value: 0.038 SEEEEEEETTSSEEEEEETTSEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriW 37 +++s++ ++d+ + sGs+D tv +W tr|C3Z5L8|C3Z5L8_BRAFL 109 WISSVQGNRDSIL--SGSYDSTVQVW 132 4777755555555..9********** PP == domain 2 score: 12.0 bits; conditional E-value: 0.0046 EEEEEESS.SSEEEEEEETTSSE.........EEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw.........lasGsdDgtvriWd 38 l + tGH +v ++ aw ++s+s D+ + +Wd tr|C3Z5L8|C3Z5L8_BRAFL 138 RLVSGTGHtEPVKAV------AWvkqeatggqFLSASQDQLIVLWD 177 566779**888****......66444444666567899*******9 PP == domain 3 score: 25.2 bits; conditional E-value: 3.1e-07 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++GH sv +la++p + +asGs+D+ +++W+ tr|C3Z5L8|C3Z5L8_BRAFL 190 CCRGHaRSVDCLATHPTADKFASGSWDKMIKLWS 223 579**888*************************5 PP == domain 4 score: 23.9 bits; conditional E-value: 8.4e-07 EEEEEEESS.SSEEEEEEETTSSE.....EEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw.....lasGsdDgtvriWd 38 ++l tl GH vts+ +w l+s+s+D+t+r Wd tr|C3Z5L8|C3Z5L8_BRAFL 252 TPLMTLQGHsEAVTSV------TWvdditLCSASWDHTIRTWD 288 6899*****555****......99777777899*********9 PP == domain 5 score: 21.4 bits; conditional E-value: 5.1e-06 EEESSSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGHssvtslafspdgawlasGsdDgtvriWd 38 tltG + +s+a+s+ +++lasGs D++vr+Wd tr|C3Z5L8|C3Z5L8_BRAFL 297 TLTGSKAFHSIAYSSLSHLLASGSSDRHVRLWD 329 6778877799999999*******99*******9 PP == domain 6 score: 30.5 bits; conditional E-value: 6.7e-09 EEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 tlt+H ++v+++a+sp +++++ s+s+D+t+++Wd tr|C3Z5L8|C3Z5L8_BRAFL 340 STLTAHqGWVSAVAWSPTNQYHLtSASYDKTLKLWD 375 589***888************7725699*******9 PP >> tr|C3XZE2|C3XZE2_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_117940 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 12.2 0.0 0.004 0.41 3 37 .. 5 41 .. 3 42 .. 0.87 2 ! 13.1 0.3 0.0021 0.22 5 38 .] 50 84 .. 46 84 .. 0.85 3 ? 4.8 0.0 0.85 89 8 38 .] 143 172 .. 135 172 .. 0.74 4 ! 21.6 0.2 4.2e-06 0.00044 9 38 .] 191 224 .. 182 224 .. 0.85 5 ? 1.5 0.0 9.6 1e+03 1 23 [. 227 250 .. 227 265 .. 0.78 6 ? 4.1 0.0 1.4 1.5e+02 13 37 .. 434 452 .. 421 452 .. 0.84 7 ! 19.5 0.2 2e-05 0.0021 3 38 .] 511 552 .. 509 552 .. 0.87 8 ! 20.9 0.1 7e-06 0.00073 3 38 .] 617 653 .. 615 653 .. 0.80 9 ? 2.4 0.0 5.1 5.3e+02 2 37 .. 658 692 .. 657 693 .. 0.82 10 ! 14.8 0.1 0.00062 0.064 3 38 .] 699 735 .. 697 735 .. 0.79 Alignments for each domain: == domain 1 score: 12.2 bits; conditional E-value: 0.004 EEEEEE.SSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtlt.GHss.vtslafspdgawlasGsdDgtvriW 37 ++++l+ +H++ vt+l ++p + +++G +Dg ++ W tr|C3XZE2|C3XZE2_BRAFL 5 KQHILKdTHNHsVTALGYHPTRREILAGFEDGVIKAW 41 688887688556***********************99 PP == domain 2 score: 13.1 bits; conditional E-value: 0.0021 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + H +++t++ f d ++l+s+s Dgt+ W+ tr|C3XZE2|C3XZE2_BRAFL 50 QCVQEHaGWITDFLFWADEKLLLSASNDGTILCWS 84 445579888*************************5 PP == domain 3 score: 4.8 bits; conditional E-value: 0.85 ESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGHss.vtslafspdgawlasGsdDgtvriWd 38 + H++ v+++ + + + ++G D++ +i+d tr|C3XZE2|C3XZE2_BRAFL 143 REHTDiVRCIVCHENRVY-TAGY-DRKFMIYD 172 578664799977777777.4455.******98 PP == domain 4 score: 21.6 bits; conditional E-value: 4.2e-06 SS.SSEEEEE...EETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtsla...fspdgawlasGsdDgtvriWd 38 +H +++++ s +++w+++Gs D+tv+iW+ tr|C3XZE2|C3XZE2_BRAFL 191 AHdAGINCMImvkDSENNTWILTGSFDKTVKIWS 224 67555**999999********************5 PP == domain 5 score: 1.5 bits; conditional E-value: 9.6 TEEEEEEESS.SSEEEEEEETTSS CS WD40 1 gqclrtltGH.ssvtslafspdga 23 gq++++l+G s +ts+++++ ++ tr|C3XZE2|C3XZE2_BRAFL 227 GQLTHKLDGFmSAITSICYCKPSK 250 689999****999****9655444 PP == domain 6 score: 4.1 bits; conditional E-value: 1.4 EEEEEEETTSSEEEEEETTSEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriW 37 v sl ++l++ ++D ++++W tr|C3XZE2|C3XZE2_BRAFL 434 VESL------DLLVATCEDSNIYVW 452 7788......99987788******* PP == domain 7 score: 19.5 bits; conditional E-value: 2e-05 EEEEEESS.SSEEEEE.....EETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtsla.....fspdgawlasGsdDgtvriWd 38 c +l GH s+vts+ d a+l+sG++D+ + iWd tr|C3XZE2|C3XZE2_BRAFL 511 CKNVLQGHnSCVTSVIvvgreAGYDRAYLVSGGWDRRLLIWD 552 677899**666****9988887788888*************9 PP == domain 8 score: 20.9 bits; conditional E-value: 7e-06 EEEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtsla.fspdgawlasGsdDgtvriWd 38 ++ tl GH + +t ++ ++ +w+ ++s+Dgt+riW+ tr|C3XZE2|C3XZE2_BRAFL 617 LVNTLQGHeGEITQVRwNHLTDKWV-TASEDGTLRIWS 653 6789****877**998555566666.7999*******5 PP == domain 9 score: 2.4 bits; conditional E-value: 5.1 EEEEEEESSSSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGHssvtslafspdgawlasGsdDgtvriW 37 +c ++l H+ v++l+ ++ + +++G ++++ tr|C3XZE2|C3XZE2_BRAFL 658 NCDQILNVHGTVSALCIDQTNGCMVAGV-QDVIKVY 692 68899999*88*****998888888787.8888876 PP == domain 10 score: 14.8 bits; conditional E-value: 0.00062 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++t GH + v+++ p+ a +s+s+D t+ iW+ tr|C3XZE2|C3XZE2_BRAFL 699 LVQTNVGHtDAVRCIIHIPERAQYVSSSWDMTIQIWN 735 678888**666****966666665789*********8 PP >> tr|C3XSK3|C3XSK3_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_282121 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 13.7 0.1 0.0014 0.14 2 37 .. 173 210 .. 171 211 .. 0.87 2 ! 28.6 0.5 2.8e-08 2.9e-06 1 37 [. 215 252 .. 215 253 .. 0.91 3 ! 17.1 0.0 0.00012 0.012 2 38 .] 300 337 .. 299 337 .. 0.90 4 ! 27.7 0.2 5.2e-08 5.5e-06 2 38 .] 342 379 .. 341 379 .. 0.94 5 ! 27.3 2.1 6.7e-08 7e-06 4 38 .] 388 422 .. 385 422 .. 0.81 6 ? 2.6 0.0 4.4 4.5e+02 4 38 .] 430 464 .. 427 464 .. 0.78 7 ? 2.5 0.1 4.5 4.7e+02 8 37 .. 479 511 .. 474 512 .. 0.77 Alignments for each domain: == domain 1 score: 13.7 bits; conditional E-value: 0.0014 EEEEEEESS.SSEEEEEEETTSSEEEEE..ETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasG..sdDgtvriW 37 q +r + GH ++v+ + s+ ++ ++ G s D+t ++W tr|C3XSK3|C3XSK3_BRAFL 173 QMVRRFVGHrDGVWEVNISRTKPHVL-GtvSADRTAKLW 210 4567799**999*************9.54578******* PP == domain 2 score: 28.6 bits; conditional E-value: 2.8e-08 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 gqc+ + GH +sv+s++f+p+ ++ +++s D+t ++W tr|C3XSK3|C3XSK3_BRAFL 215 GQCVLNYVGHsGSVNSIRFHPNDQLALTASGDHTAHVW 252 79********777************887766******* PP == domain 3 score: 17.1 bits; conditional E-value: 0.00012 EEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 ++l+++tGH++ + + ++ dg+ ++++s+D+t ++d tr|C3XSK3|C3XSK3_BRAFL 300 SPLTEFTGHTDvIIAADWMADGKQVVTASWDRTAQLYD 337 6899*****88657**9****************99987 PP == domain 4 score: 27.7 bits; conditional E-value: 5.2e-08 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++++ltGH + t ++++p +++++++s+D t r+Wd tr|C3XSK3|C3XSK3_BRAFL 342 ELVHSLTGHdQELTNCSTHPTQRLVVTSSKDSTFRLWD 379 579******777*************************9 PP == domain 5 score: 27.3 bits; conditional E-value: 6.7e-08 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + ++ GH + v+s+ f + + +sGsdD+tv++Wd tr|C3XSK3|C3XSK3_BRAFL 388 VNVFQGHtDTVNSVTFTSGDNV-VSGSDDRTVKVWD 422 56899**666****66655555.69**********9 PP == domain 6 score: 2.6 bits; conditional E-value: 4.4 EEEEESSSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGHssvtslafspdgawlasGsdDgtvriWd 38 l t+++ s ++ +++s ++ +a +d++++r++d tr|C3XSK3|C3XSK3_BRAFL 430 LATIRTDSAINRISVSALHKVIAIPHDNRHIRLFD 464 5566655568888888888899999********98 PP == domain 7 score: 2.5 bits; conditional E-value: 4.5 ESSSS..EEEEEEETTSSE..EEEEETTSEEEEE CS WD40 8 tGHss..vtslafspdgaw..lasGsdDgtvriW 37 tGH + v++ a+ +++++ l+s++ D+ v W tr|C3XSK3|C3XSK3_BRAFL 479 TGH-HrmVCGTAWYDENPMcnLFSCGFDRQVIGW 511 599.56899998888888888778877*998655 PP >> tr|C3Z3X1|C3Z3X1_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_131012 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.3 0.1 2.5e-06 0.00027 2 38 .] 82 126 .. 81 126 .. 0.80 2 ? 2.7 0.0 4.1 4.2e+02 13 37 .. 194 218 .. 175 219 .. 0.70 3 ! 12.7 0.0 0.0029 0.3 2 37 .. 227 264 .. 226 264 .. 0.89 4 ! 15.1 0.0 0.00048 0.05 7 38 .] 356 388 .. 352 388 .. 0.90 5 ! 16.3 0.2 0.00021 0.022 15 37 .. 448 470 .. 391 471 .. 0.93 6 ! 18.0 0.7 6e-05 0.0063 4 37 .. 482 516 .. 479 517 .. 0.81 7 ! 24.9 1.2 3.8e-07 4e-05 2 38 .] 592 630 .. 591 630 .. 0.83 Alignments for each domain: == domain 1 score: 22.3 bits; conditional E-value: 2.5e-06 EEEEEEESS.SSEEEEEEETTSSEEEEE.....ET..TSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasG.....sd..DgtvriWd 38 q++r++ GH ++v +la++pd +a+G ++ +vr+Wd tr|C3Z3X1|C3Z3X1_BRAFL 82 QLQRHYLGHnDDVKCLAVHPDRITIATGqvtghGRdgEAHVRVWD 126 899******666*************98655433224699999998 PP == domain 2 score: 2.7 bits; conditional E-value: 4.1 EEEEEEETTSSE.EEEEETTSEEEEE CS WD40 13 vtslafspdgaw.lasGsdDgtvriW 37 v + f+p + +++++ + ++ +W tr|C3Z3X1|C3Z3X1_BRAFL 194 VLAAEFHPTEKNqIVTCG-KSHICFW 218 5555577777777899**.******* PP == domain 3 score: 12.7 bits; conditional E-value: 0.0029 EEEEEEESS.SS..EEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ss..vtslafspdgawlasGsdDgtvriW 37 +++++++ H ++ v +laf +g+ + +G+ +g++ +W tr|C3Z3X1|C3Z3X1_BRAFL 227 KKQGVFEKHdKPkyVLCLAFAENGDAI-TGDSNGNIFVW 264 57899999*87788************7.7*66******* PP == domain 4 score: 15.1 bits; conditional E-value: 0.00048 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++H + ++la +p++++++++ +D+ v +W+ tr|C3Z3X1|C3Z3X1_BRAFL 356 VEAHtDELWGLAAHPNQHLFLTCAYDRRVFLWN 388 5799666****************99*******8 PP == domain 5 score: 16.3 bits; conditional E-value: 0.00021 EEEEETTSSEEEEEETTSEEEEE CS WD40 15 slafspdgawlasGsdDgtvriW 37 ++++spdg++la Gs D+ ++++ tr|C3Z3X1|C3Z3X1_BRAFL 448 CVRYSPDGNFLAVGSHDNIIYLY 470 999***********99****998 PP == domain 6 score: 18.0 bits; conditional E-value: 6e-05 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +++ltGH s+vt+l++s+d++++ s s D + W tr|C3Z3X1|C3Z3X1_BRAFL 482 VGKLTGHsSFVTHLDWSSDSQYIRSNSGDYEILYW 516 6789***777************9653449988888 PP == domain 7 score: 24.9 bits; conditional E-value: 3.8e-07 EEEEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtsla.fspdgawlasGsdDgtvriWd 38 ++ +++ GH s+vt ++ ++d+++l++G++D+++ W+ tr|C3Z3X1|C3Z3X1_BRAFL 592 SPSHSYPGHsSHVTTVDfLHDDSTLLSTGGKDNSIFQWK 630 689******888*****55555555679**********5 PP >> tr|C3ZMP1|C3ZMP1_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_233402 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.0 0.3 0.00054 0.056 18 38 .] 3 25 .. 1 25 [. 0.85 2 ! 27.6 0.1 5.6e-08 5.8e-06 1 37 [. 29 68 .. 29 69 .. 0.91 3 ! 13.7 0.0 0.0013 0.14 2 38 .] 75 112 .. 74 112 .. 0.89 4 ! 25.2 0.0 3.2e-07 3.3e-05 8 38 .] 124 155 .. 116 155 .. 0.87 5 ! 27.6 0.8 5.7e-08 5.9e-06 5 38 .] 172 206 .. 170 206 .. 0.94 6 ? 3.5 0.0 2.3 2.4e+02 4 25 .. 213 235 .. 210 236 .] 0.77 Alignments for each domain: == domain 1 score: 15.0 bits; conditional E-value: 0.00054 EETTSSEEEEEE..TTSEEEEEE CS WD40 18 fspdgawlasGs..dDgtvriWd 38 spd + ++sG+ dD t+riW+ tr|C3ZMP1|C3ZMP1_BRAFL 3 LSPDDTRIVSGGgmDDDTIRIWS 25 59********95569*******5 PP == domain 2 score: 27.6 bits; conditional E-value: 5.6e-08 TEEEEEEESS.SSEEEEE..EETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGH.ssvtsla..fspdgawlasGsdDgtvriW 37 g+++ +++GH +s+++++ s ga+l+sGs D t+r+W tr|C3ZMP1|C3ZMP1_BRAFL 29 GKQVCVYRGHsDSIRCVRvvKSAQGALLLSGSLDTTCRLW 68 577899****777******9******************** PP == domain 3 score: 13.7 bits; conditional E-value: 0.0013 EEEEEEESSSSE..EEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGHssv..tslafspdgawlasGsdDgtvriWd 38 q ++ l GH + +++a s +g+ +sGs++g +r W+ tr|C3ZMP1|C3ZMP1_BRAFL 75 QEVHRLPGH-DLatYAVAISVNGSRAVSGSRNGELRAWN 112 67899****.744589999*******************8 PP == domain 4 score: 25.2 bits; conditional E-value: 3.2e-07 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++H s++++a+ +dg+ ++sGs+D+ v++W+ tr|C3ZMP1|C3ZMP1_BRAFL 124 SAHsRSIRAVAVAQDGNTFVSGSKDRQVKVWS 155 699555*************************5 PP == domain 5 score: 27.6 bits; conditional E-value: 5.7e-08 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++lt H + v ++a s+d+++ asG++Dg v +W+ tr|C3ZMP1|C3ZMP1_BRAFL 172 HVLTCHgGTVQAVAISKDSKLAASGGWDGIVVVWN 206 899***666*************************8 PP == domain 6 score: 3.5 bits; conditional E-value: 2.3 EEEEESS.SS.EEEEEEETTSSEE CS WD40 4 lrtltGH.ss.vtslafspdgawl 25 ++t++ H s v s+afs d + l tr|C3ZMP1|C3ZMP1_BRAFL 213 VQTFR-HvSYgVMSVAFSGDDTIL 235 67777.875579***999998877 PP >> tr|C3YY58|C3YY58_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_221740 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 13.9 0.2 0.0012 0.12 9 38 .] 10 44 .. 3 44 .. 0.85 2 ! 31.6 0.1 3e-09 3.1e-07 8 37 .. 67 97 .. 60 98 .. 0.89 3 ! 35.5 1.2 1.8e-10 1.9e-08 1 38 [] 122 160 .. 122 160 .. 0.96 4 ! 23.8 0.0 8.4e-07 8.8e-05 4 37 .. 168 202 .. 165 203 .. 0.90 5 ? 4.3 0.0 1.3 1.3e+02 9 29 .. 224 242 .. 215 248 .. 0.72 6 ? 6.4 0.3 0.28 30 7 37 .. 265 312 .. 259 312 .. 0.57 7 ? 2.9 0.1 3.5 3.6e+02 11 33 .. 329 351 .. 319 352 .. 0.77 Alignments for each domain: == domain 1 score: 13.9 bits; conditional E-value: 0.0012 SS..SSEEEEEEETTSSEEEEEE...TTSEEEEEE CS WD40 9 GH..ssvtslafspdgawlasGs...dDgtvriWd 38 +H +++ s++ +pdg+ +a+G+ d g+v +W+ tr|C3YY58|C3YY58_BRAFL 10 THdgKPIFSIDIHPDGSRFATGGqgeDSGKVAVWN 44 797677****************8666799999998 PP == domain 2 score: 31.6 bits; conditional E-value: 3e-09 ESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriW 37 + H +v+++++s+dg++lasG+dD+ ++iW tr|C3YY58|C3YY58_BRAFL 67 DNHlACVNCVRWSSDGRYLASGGDDKLIMIW 97 569889************************* PP == domain 3 score: 35.5 bits; conditional E-value: 1.8e-10 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++c+ tl++H +++ +la+sp awla++s D+t+ +W+ tr|C3YY58|C3YY58_BRAFL 122 WRCVATLRAHtGDILDLAWSPQDAWLATCSIDNTIIVWN 160 68********888*************************8 PP == domain 4 score: 23.8 bits; conditional E-value: 8.4e-07 EEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGHss.vtslafspdgawlasGsdDgtvriW 37 + +l+GH++ v ++ ++p g++la+ sdD+++r+W tr|C3YY58|C3YY58_BRAFL 168 ISILKGHTGlVKGVTWDPVGKYLATQSDDKSLRVW 202 6789***6679************98899******* PP == domain 5 score: 4.3 bits; conditional E-value: 1.3 SSSSEEEEEEETTSSEEEEEE CS WD40 9 GHssvtslafspdgawlasGs 29 +H v a spdg++++s++ tr|C3YY58|C3YY58_BRAFL 224 TH--VLRSALSPDGQYIVSAH 242 34..744457********986 PP == domain 6 score: 6.4 bits; conditional E-value: 0.28 EESS.SSEEEEEEETTSSE.................EEEEETTSEEEEE CS WD40 7 ltGH.ssvtslafspdgaw.................lasGsdDgtvriW 37 + GH + +t ++f+p+ + a Gs+D+++ iW tr|C3YY58|C3YY58_BRAFL 265 FVGHrKAITVVRFNPN-IFqkvvnkasgkvrtffscCAIGSRDRSLSIW 312 6677777776653333.2244444444444554333344899******9 PP == domain 7 score: 2.9 bits; conditional E-value: 3.5 SSEEEEEEETTSSEEEEEETTSE CS WD40 11 ssvtslafspdgawlasGsdDgt 33 +sv ++++ ++g l+ +s+Dgt tr|C3YY58|C3YY58_BRAFL 329 NSVMDISWGKSGFELLVCSWDGT 351 56999977777777888*****8 PP >> tr|C3YKN6|C3YKN6_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_274870 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.7 0.0 0.025 2.6 12 38 .] 33 59 .. 27 59 .. 0.78 2 ! 18.2 0.5 5.2e-05 0.0054 6 38 .] 73 106 .. 69 106 .. 0.81 3 ! 18.9 0.0 3.1e-05 0.0032 3 38 .] 112 148 .. 110 148 .. 0.93 4 ! 18.7 0.1 3.5e-05 0.0036 4 38 .] 164 199 .. 161 199 .. 0.92 5 ! 25.1 0.1 3.4e-07 3.6e-05 4 38 .] 206 241 .. 203 241 .. 0.90 6 ? 8.9 0.0 0.046 4.8 2 35 .. 246 280 .. 245 283 .. 0.78 Alignments for each domain: == domain 1 score: 9.7 bits; conditional E-value: 0.025 SEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriWd 38 +v++l+ + ++ l+++++D +riW+ tr|C3YKN6|C3YKN6_BRAFL 33 GVNALQLDFLQKRLFTSGRDSIIRIWN 59 4777766666666888999*******8 PP == domain 2 score: 18.2 bits; conditional E-value: 5.2e-05 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + + H ++v+++ + +g+ l+s+s D tv++W+ tr|C3YKN6|C3YKN6_BRAFL 73 SMEHHtDWVNDIVLCCNGRTLISASSDTTVKVWN 106 5667866688777777*****99988*******8 PP == domain 3 score: 18.9 bits; conditional E-value: 3.1e-05 EEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 c+ tl++H++ v +la+ +d+ +as++ D+ + +Wd tr|C3YKN6|C3YKN6_BRAFL 112 CMSTLRTHKDyVKALAYARDKEQVASAGLDRQIFLWD 148 999*****666**************9999*******9 PP == domain 4 score: 18.7 bits; conditional E-value: 3.5e-05 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + +ltG +s++sla +++g+ ++sGs + +r+Wd tr|C3YKN6|C3YKN6_BRAFL 164 TSSLTGNkDSIYSLAMNHYGTIIISGSTEKVLRVWD 199 5689***777*************************9 PP == domain 5 score: 25.1 bits; conditional E-value: 3.4e-07 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 l +l+GH ++v +l +++dg+ +sGs Dgt+r+W+ tr|C3YKN6|C3YKN6_BRAFL 206 LMKLKGHtDNVKALLVNRDGTQCLSGSSDGTIRLWS 241 7789***766****************99*******5 PP == domain 6 score: 8.9 bits; conditional E-value: 0.046 EEEEEEESS.SSEEEEEEETTSSE..EEEEETTSEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw..lasGsdDgtvr 35 +c+ t++ H ++v++l + + a+ + sG++D+ v+ tr|C3YKN6|C3YKN6_BRAFL 246 RCIATYRVHdDGVWAL--QANEAFstFYSGGRDRRVY 280 79*******777****..55555544689****9986 PP >> tr|C3Y3Z8|C3Y3Z8_BRAFL Beta-transducin repeat containing protein, isoform a OS=Branchiostoma floridae OX=7739 GN=BTR # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.4 0.1 9.3e-05 0.0097 10 38 .] 79 106 .. 68 106 .. 0.76 2 ! 18.1 0.4 5.7e-05 0.0059 2 34 .. 111 142 .. 110 143 .. 0.88 3 ! 25.1 0.1 3.3e-07 3.5e-05 3 38 .] 150 184 .. 148 184 .. 0.84 4 ! 28.1 0.0 3.8e-08 4e-06 1 38 [] 188 224 .. 188 224 .. 0.87 5 ! 16.4 0.1 0.00019 0.02 3 38 .] 239 273 .. 238 273 .. 0.79 Alignments for each domain: == domain 1 score: 17.4 bits; conditional E-value: 9.3e-05 S.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvriWd 38 ++v++l + d + ++sG +D+t++iWd tr|C3Y3Z8|C3Y3Z8_BRAFL 79 NsKGVYCL--QYDDNKIVSGLRDNTIKIWD 106 33569***..555555789*99*******9 PP == domain 2 score: 18.1 bits; conditional E-value: 5.7e-05 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtv 34 +c+++ltGH +sv +l + d + ++sGs D tv tr|C3Y3Z8|C3Y3Z8_BRAFL 111 ECVQVLTGHtGSVLCL--QYDDQVIISGSSDSTV 142 79*******888****..77777799**98*998 PP == domain 3 score: 25.1 bits; conditional E-value: 3.3e-07 EEEEEESS.SSEEEEEEETTSSE....EEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw....lasGsdDgtvriWd 38 +rtl GH ++ +l ++ ++sGs D+t+r+Wd tr|C3Y3Z8|C3Y3Z8_BRAFL 150 FVRTLNGHkRGIACL------QYrdrlVVSGSSDNTIRLWD 184 689*****555****......66666589**99*******9 PP == domain 4 score: 28.1 bits; conditional E-value: 3.8e-08 TEEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 g clr+l+GH v+++ d++ ++sG +Dg++++Wd tr|C3Y3Z8|C3Y3Z8_BRAFL 188 GACLRILEGHEElVRCI--RFDNKRIVSGAYDGKIKVWD 224 57********446****..55777799**99*******9 PP == domain 5 score: 16.4 bits; conditional E-value: 0.00019 EEEEEESSSS.EEEEEEETTSSE....EEEEETTSEEEEEE CS WD40 3 clrtltGHss.vtslafspdgaw....lasGsdDgtvriWd 38 clrtl Hs+ v l ++ ++s+s D t+ iWd tr|C3Y3Z8|C3Y3Z8_BRAFL 239 CLRTLVEHSGrVFRL------QFdefqIVSSSHDDTILIWD 273 99******445****......555555556766*******9 PP >> tr|C3Z2P6|C3Z2P6_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_203639 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 19.0 0.2 2.9e-05 0.003 4 38 .] 6 41 .. 4 41 .. 0.92 2 ! 29.0 0.4 2e-08 2.1e-06 8 38 .] 63 94 .. 50 94 .. 0.92 3 ! 28.1 0.4 4e-08 4.1e-06 4 38 .] 101 136 .. 98 136 .. 0.94 4 ! 16.4 0.0 0.00019 0.02 6 38 .] 145 178 .. 141 178 .. 0.79 5 ! 11.0 0.1 0.0097 1 6 37 .. 186 218 .. 181 218 .. 0.76 6 ? 3.0 0.1 3.2 3.3e+02 12 29 .. 238 261 .. 224 264 .. 0.74 Alignments for each domain: == domain 1 score: 19.0 bits; conditional E-value: 2.9e-05 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++l+GH + t+l +s+d++ + +G +D+++ W+ tr|C3Z2P6|C3Z2P6_BRAFL 6 IQVLRGHqLPLTCLVVSSDSKHVYTGAKDCSIIKWN 41 5789***7779*********************9997 PP == domain 2 score: 29.0 bits; conditional E-value: 2e-08 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 GH +v +la s+d+++lasG++++ ++iWd tr|C3Z2P6|C3Z2P6_BRAFL 63 QGHtAHVLCLAISSDNKFLASGCRNKIIHIWD 94 589777*************************9 PP == domain 3 score: 28.1 bits; conditional E-value: 4e-08 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 l+t+tGH + v +laf + + l+sGs D+tv++W+ tr|C3Z2P6|C3Z2P6_BRAFL 101 LHTFTGHrDAVAGLAFRKGTHTLFSGSHDKTVKVWS 136 8******888****************99*******5 PP == domain 4 score: 16.4 bits; conditional E-value: 0.00019 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 tl GH +s+ +l+ + +++G++D+tvr+W+ tr|C3Z2P6|C3Z2P6_BRAFL 145 TLFGHeDSIMALDSLARERAVTAGGRDRTVRVWK 178 6669*888**9*65555555889**********6 PP == domain 5 score: 11.0 bits; conditional E-value: 0.0097 EEESS..SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 6 tltGH..ssvtslafspdgawlasGsdDgtvriW 37 ++ G +s+ ++af +++ + sG+d+g+v +W tr|C3Z2P6|C3Z2P6_BRAFL 186 VFHGEnrGSIDCVAFINEQHIV-SGDDNGNVCVW 218 455554445999*888888886.8********** PP == domain 6 score: 3.0 bits; conditional E-value: 3.2 S......EEEEEEETTSSEEEEEE CS WD40 12 s......vtslafspdgawlasGs 29 s v+++a +++++asG+ tr|C3Z2P6|C3Z2P6_BRAFL 238 SeqqecwVSAVAALTNSDLIASGG 261 14445569999999********98 PP >> tr|C3YQ92|C3YQ92_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_230620 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 11.8 0.1 0.0055 0.57 10 38 .] 44 73 .. 35 73 .. 0.81 2 ! 21.4 0.8 5.1e-06 0.00053 2 38 .] 78 116 .. 77 116 .. 0.87 3 ! 35.3 0.3 2e-10 2.1e-08 3 38 .] 122 158 .. 120 158 .. 0.95 4 ! 16.2 0.1 0.00023 0.024 14 38 .] 178 202 .. 170 202 .. 0.95 5 ! 24.4 0.2 5.7e-07 5.9e-05 2 36 .. 205 242 .. 204 242 .. 0.86 Alignments for each domain: == domain 1 score: 11.8 bits; conditional E-value: 0.0055 S.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvriWd 38 H s ++++f ++g ++++s D+t+ +Wd tr|C3YQ92|C3YQ92_BRAFL 44 HtSYMSCCRFVKSGYQILTCSGDCTCALWD 73 7555789999999999999988*******9 PP == domain 2 score: 21.4 bits; conditional E-value: 5.1e-06 EEEEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 q+++++ GH s+v +l+ sp + ++sGs D+t +Wd tr|C3YQ92|C3YQ92_BRAFL 78 QLMQSFHGHiSDVLCLDISPVHCRtFLSGSSDKTASLWD 116 7899************977777777779*88*******9 PP == domain 3 score: 35.3 bits; conditional E-value: 2e-10 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 c+++++GH +++++++f p g ++++sdDgt+r++d tr|C3YQ92|C3YQ92_BRAFL 122 CVHSFDGHdGDINGVKFFPTGESFVTASDDGTCRLYD 158 9*******888************************98 PP == domain 4 score: 16.2 bits; conditional E-value: 0.00023 EEEEEETTSSEEEEEETTSEEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriWd 38 t+++ s++g+++++G D tv +Wd tr|C3YQ92|C3YQ92_BRAFL 178 TCVDISKSGKLMFAGYNDYTVNVWD 202 8**************99*******9 PP == domain 5 score: 24.4 bits; conditional E-value: 5.7e-07 EEEEEEE..SS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 2 qclrtlt..GH.ssvtslafspdgawlasGsdDgtvri 36 +c+r+ + +H + vt+l+ spdg+ ++sGs+D t+++ tr|C3YQ92|C3YQ92_BRAFL 205 KCVRVGRiyAHdNKVTCLQRSPDGTAVCSGSWDTTLKV 242 5677754459*888**********************97 PP >> tr|C3YYY1|C3YYY1_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_66854 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 20.1 0.1 1.3e-05 0.0014 2 28 .. 126 153 .. 125 161 .. 0.87 2 ? 7.3 0.0 0.14 15 12 37 .. 223 247 .. 207 248 .. 0.80 3 ! 15.4 0.0 0.00039 0.041 7 38 .] 259 290 .. 253 290 .. 0.83 4 ? 6.5 0.2 0.26 27 5 38 .] 346 380 .. 342 380 .. 0.86 5 ? 4.2 0.0 1.4 1.4e+02 9 34 .. 396 417 .. 388 419 .. 0.76 6 ? 7.6 0.0 0.12 12 15 37 .. 440 462 .. 429 463 .. 0.89 7 ! 17.7 0.3 7.6e-05 0.0079 2 38 .] 472 509 .. 471 509 .. 0.89 8 ! 21.6 0.1 4.4e-06 0.00045 3 37 .. 585 621 .. 583 622 .. 0.87 Alignments for each domain: == domain 1 score: 20.1 bits; conditional E-value: 1.3e-05 EEEEEEESS.SSEEEEEEETTSSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasG 28 + +r++ GH +++t+la++pdg ++sG tr|C3YYY1|C3YYY1_BRAFL 126 KAQRHYLGHtDDITCLAVHPDGVTVVSG 153 5699*****888*************998 PP == domain 2 score: 7.3 bits; conditional E-value: 0.14 SEEEEEEETTSSEEEEEETTSEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriW 37 v +++f ++g+ + +G+ +g++ i+ tr|C3YYY1|C3YYY1_BRAFL 223 YVECISFTQNGDVI-TGDSKGNILIF 247 399**********8.7*66***9997 PP == domain 3 score: 15.4 bits; conditional E-value: 0.00039 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + +H ++vt+l +dg++++ G+ D+++ +Wd tr|C3YYY1|C3YYY1_BRAFL 259 IGAHkDGVTALYLRRDGTLIS-GGGDKKLVLWD 290 5689666************85.655*******9 PP == domain 4 score: 6.5 bits; conditional E-value: 0.26 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 t GH s +a++p+++ +++++d +v +W+ tr|C3YYY1|C3YYY1_BRAFL 346 LTTQGHhSELLTVATHPSQPVFLTSDDLSHVILWN 380 56679988899*************99999999997 PP == domain 5 score: 4.2 bits; conditional E-value: 1.4 SSSSEEEEEEETTSSEEEEEETTSEE CS WD40 9 GHssvtslafspdgawlasGsdDgtv 34 +H s +f pdg+++a Gs g + tr|C3YYY1|C3YYY1_BRAFL 396 AH----SADFYPDGKLIAVGSASGRL 417 55....889*********9*977765 PP == domain 6 score: 7.6 bits; conditional E-value: 0.12 EEEEETTSSEEEEEETTSEEEEE CS WD40 15 slafspdgawlasGsdDgtvriW 37 +l++sp+g +la Gs + ++++ tr|C3YYY1|C3YYY1_BRAFL 440 CLKYSPNGEMLAVGSHENCIYVY 462 99************989999886 PP == domain 7 score: 17.7 bits; conditional E-value: 7.6e-05 EEEEEEESS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawl.asGsdDgtvriWd 38 ++++tl+GH s vt+l+++ ++++l ++++ D + Wd tr|C3YYY1|C3YYY1_BRAFL 472 KKIGTLRGHsSYVTHLDWDVSSRFLqSTSG-DYELLYWD 509 6789*****555************998999.*9999998 PP == domain 8 score: 21.6 bits; conditional E-value: 4.4e-06 EEEEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawla.sGsdDgtvriW 37 + +++ GH s+vt+++f d ++l+ +G+ D v W tr|C3YYY1|C3YYY1_BRAFL 585 PGQIYPGHsSHVTCVRFLYDDSYLLsTGGADSAVFQW 621 6689****888************8648999****999 PP >> tr|C3XY57|C3XY57_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_206058 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.6 0.0 0.013 1.4 10 38 .] 42 72 .. 34 72 .. 0.85 2 ! 15.8 0.7 0.00028 0.03 9 38 .] 97 128 .. 87 128 .. 0.73 3 ! 29.3 0.1 1.6e-08 1.6e-06 2 38 .] 177 215 .. 176 215 .. 0.91 4 ! 21.6 0.1 4.3e-06 0.00045 8 38 .] 242 273 .. 236 273 .. 0.85 5 ! 23.3 0.2 1.2e-06 0.00013 2 37 .. 325 361 .. 324 362 .. 0.92 Alignments for each domain: == domain 1 score: 10.6 bits; conditional E-value: 0.013 S.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 10 H.ssvtsla.fspdgawlasGsdDgtvriWd 38 H s+v+sl+ + ++++l+sG+ Dg + ++d tr|C3XY57|C3XY57_BRAFL 42 HaSGVNSLDlDPAESRYLLSGGADGVIAVYD 72 9888****977777788**********9998 PP == domain 2 score: 15.8 bits; conditional E-value: 0.00028 SSSS.EEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 9 GHss.vtslafspdgawla.sGsdDgtvriWd 38 H+ v +++ p+ + l+ s+s+D+t+++Wd tr|C3XY57|C3XY57_BRAFL 97 VHKYsVETVRWYPHDTGLFtSSSMDKTLKVWD 128 352349999877777777625689*******9 PP == domain 3 score: 29.3 bits; conditional E-value: 1.6e-08 EEEEEEESS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawl.asGsdDgtvriWd 38 + +++l+GH v + ++sp +++l a+Gs D++v +Wd tr|C3XY57|C3XY57_BRAFL 177 SSTHILKGHrAAVKCARWSPRNPYLlATGSQDNKVLLWD 215 6789*****888************7369**********9 PP == domain 4 score: 21.6 bits; conditional E-value: 4.3e-06 ESS.SSEEEEEEETTSSEEEE.EETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlas.GsdDgtvriWd 38 t+H ++v++l+f p+g l+s G+ D+ +r+Wd tr|C3XY57|C3XY57_BRAFL 242 TAHnGHVNGLCFTPEGLHLLSfGT-DHRLRLWD 273 578555*************98455.*******9 PP == domain 5 score: 23.3 bits; conditional E-value: 1.2e-06 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 + l+ l GH + v ++ f+pd + l sG+ D ++ +W tr|C3XY57|C3XY57_BRAFL 325 TSLHRLVGHyNYVQCCVFNPDTQELYSGGSDSNILVW 361 568999***999*9999***********88******* PP >> tr|C3XTS9|C3XTS9_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_122527 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 12.4 0.1 0.0036 0.37 8 38 .] 2 33 .. 1 33 [. 0.73 2 ! 23.3 2.3 1.3e-06 0.00013 8 38 .] 61 92 .. 37 92 .. 0.94 3 ! 30.8 0.2 5.3e-09 5.5e-07 8 38 .] 108 139 .. 101 139 .. 0.92 4 ! 39.1 1.2 1.3e-11 1.4e-09 2 38 .] 142 181 .. 141 181 .. 0.86 Alignments for each domain: == domain 1 score: 12.4 bits; conditional E-value: 0.0036 ESS.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtsla.fspdgawlasGsdDgtvriWd 38 +GH ++v+ ++ ++d++ + + s D+t +iW+ tr|C3XTS9|C3XTS9_BRAFL 2 RGHtDCVNRCKlCCQDQKIF-TVSNDKTAKIWN 33 79*66698887444455655.6677*******8 PP == domain 2 score: 23.3 bits; conditional E-value: 1.3e-06 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 +GH + ++s++ +++ +wl+++s+D+t+ +Wd tr|C3XTS9|C3XTS9_BRAFL 61 RGHiNVISSCCMDRNERWLCTASWDKTLQVWD 92 79*8889************************9 PP == domain 3 score: 30.8 bits; conditional E-value: 5.3e-09 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 +GH +sv+++ f +dg++l+sGs+D+tv +Wd tr|C3XTS9|C3XTS9_BRAFL 108 KGHeGSVSCCNFTRDGTLLVSGSYDQTVTLWD 139 5**999*************************9 PP == domain 4 score: 39.1 bits; conditional E-value: 1.3e-11 EEEEEEE..SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtlt..GH.ssvtslafspdgawlasGsdDgtvriWd 38 +c+++l+ GH ++vt+++fs d++w++s+s+D+t r+W+ tr|C3XTS9|C3XTS9_BRAFL 142 TCMHKLSlkGHsDWVTDCSFSEDQKWVISCSKDKTMRLWN 181 577775444**666*************************8 PP >> tr|C3YZ97|C3YZ97_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_123300 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 13.3 0.2 0.0019 0.19 3 32 .. 89 118 .. 87 122 .. 0.83 2 ? 7.9 0.2 0.095 9.9 3 37 .. 200 236 .. 198 237 .. 0.72 3 ! 31.6 0.0 3e-09 3.1e-07 8 38 .] 248 279 .. 240 279 .. 0.89 4 ? 6.6 0.1 0.24 25 3 36 .. 285 319 .. 283 321 .. 0.84 5 ? 4.2 0.0 1.3 1.4e+02 13 31 .. 339 357 .. 325 360 .. 0.77 6 ! 32.2 0.0 1.9e-09 2e-07 2 38 .] 370 407 .. 369 407 .. 0.93 7 ? 3.6 0.0 2.1 2.2e+02 10 27 .. 508 529 .. 504 544 .. 0.81 Alignments for each domain: == domain 1 score: 13.3 bits; conditional E-value: 0.0019 EEEEEESSSSEEEEEEETTSSEEEEEETTS CS WD40 3 clrtltGHssvtslafspdgawlasGsdDg 32 l+++ H++v+ ++fspdg+ +a +++ tr|C3YZ97|C3YZ97_BRAFL 89 VLHHYHFHKPVHTVKFSPDGRKFAVTRENH 118 69******************9987655555 PP == domain 2 score: 7.9 bits; conditional E-value: 0.095 EEEEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawla.sGsdDgtvriW 37 ++++l+ + + s++f++ g+w+a ++s g + +W tr|C3YZ97|C3YZ97_BRAFL 200 LIHSLSISdQRIASVSFNSTGDWIAlACSGLGQLLVW 236 566666553459999********86666548888887 PP == domain 3 score: 31.6 bits; conditional E-value: 3e-09 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 GH ++ +sla+spdg+++++G++Dg+v++W+ tr|C3YZ97|C3YZ97_BRAFL 248 QGHfNNMSSLAYSPDGQYIVTGGEDGKVKVWN 279 59*999*************************8 PP == domain 4 score: 6.6 bits; conditional E-value: 0.24 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvri 36 c t+t H + + f ++g+ ++s+s Dgt r tr|C3YZ97|C3YZ97_BRAFL 285 CFVTFTEHtAAIAGTIFTSNGHVVISASLDGTARA 319 7789999966697777****************985 PP == domain 5 score: 4.2 bits; conditional E-value: 1.3 EEEEEEETTSSEEEEEETT CS WD40 13 vtslafspdgawlasGsdD 31 ++la++++g+++++G D tr|C3YZ97|C3YZ97_BRAFL 339 FSCLAVDHSGDLVCCGAQD 357 57***********998866 PP == domain 6 score: 32.2 bits; conditional E-value: 1.9e-09 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++l +l GH ++v sl+fsp a las+s+D+tvr+Wd tr|C3YZ97|C3YZ97_BRAFL 370 RLLEVLAGHeGPVASLSFSPADAILASASWDKTVRVWD 407 5678899**999*************************9 PP == domain 7 score: 3.6 bits; conditional E-value: 2.1 S.SS...EEEEEEETTSSEEEE CS WD40 10 H.ss...vtslafspdgawlas 27 H ++ v++++fsp g+ +a+ tr|C3YZ97|C3YZ97_BRAFL 508 HwKPevrVSCVQFSPTGRAFAT 529 76677779*********98776 PP >> tr|C3Z032|C3Z032_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_85704 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 5.4 0.0 0.57 59 18 37 .. 89 108 .. 34 109 .. 0.84 2 ! 27.2 0.6 7.1e-08 7.4e-06 3 38 .] 115 151 .. 113 151 .. 0.93 3 ! 25.9 0.2 1.8e-07 1.9e-05 2 38 .] 156 194 .. 155 194 .. 0.82 4 ? 9.6 0.0 0.028 2.9 10 38 .] 206 234 .. 198 234 .. 0.85 5 ! 21.6 0.1 4.4e-06 0.00046 2 38 .] 240 277 .. 239 277 .. 0.93 6 ? 4.5 0.0 1.1 1.1e+02 3 36 .. 285 318 .. 283 318 .. 0.75 Alignments for each domain: == domain 1 score: 5.4 bits; conditional E-value: 0.57 EETTSSEEEEEETTSEEEEE CS WD40 18 fspdgawlasGsdDgtvriW 37 f dg +l++G+d g vr++ tr|C3Z032|C3Z032_BRAFL 89 FRGDGELLVAGGDEGLVRVF 108 778999***********996 PP == domain 2 score: 27.2 bits; conditional E-value: 7.1e-08 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 lrt+tGH sv++ +fs+d+ ++s+sdD+t r+Wd tr|C3Z032|C3Z032_BRAFL 115 SLRTFTGHtRSVHATCFSSDKVRVLSASDDKTTRLWD 151 689*****777*************************9 PP == domain 3 score: 25.9 bits; conditional E-value: 1.8e-07 EEEEEEESS.SSEEEEE..EETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtsla..fspdgawlasGsdDgtvriWd 38 + ++tltGH + v+sla s+ w+ +Gs+D+tvr+Wd tr|C3Z032|C3Z032_BRAFL 156 EAVQTLTGHqDYVRSLAvcKSSADMWI-TGSYDHTVRMWD 194 6689*****555*98886677777776.8**********9 PP == domain 4 score: 9.6 bits; conditional E-value: 0.028 S.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvriWd 38 H +v ++ p+g++++s++ + v++Wd tr|C3Z032|C3Z032_BRAFL 206 HgYPVEAVLMFPHGNMFLSAG-GNCVKVWD 234 744599999************.*******9 PP == domain 5 score: 21.6 bits; conditional E-value: 4.4e-06 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++l t+t H + vtslaf++ + l+s+s D++++++d tr|C3Z032|C3Z032_BRAFL 240 RLLATCTNHhKTVTSLAFNSTCTRLLSASLDRHIKVYD 277 678999999899************************98 PP == domain 6 score: 4.5 bits; conditional E-value: 1.1 EEEEEESSSSEEEEEEETTSSEEEEEETTSEEEE CS WD40 3 clrtltGHssvtslafspdgawlasGsdDgtvri 36 c+ +l s++ s+ +sp+ + +a G+ Dg + i tr|C3Z032|C3Z032_BRAFL 285 CVASLNYPSPILSFGVSPSEDVVAVGCADGMLSI 318 5555542266878889**********99**8865 PP >> tr|C3XVR2|C3XVR2_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_123360 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 38.2 0.1 2.5e-11 2.6e-09 2 38 .] 147 184 .. 146 184 .. 0.91 2 ! 35.3 0.2 2.1e-10 2.2e-08 3 38 .] 190 229 .. 188 229 .. 0.88 3 ! 25.7 0.1 2.2e-07 2.3e-05 2 37 .. 234 269 .. 233 270 .. 0.84 Alignments for each domain: == domain 1 score: 38.2 bits; conditional E-value: 2.5e-11 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +c+ t++GH v s+afsp+g++lasGs D tvr+Wd tr|C3XVR2|C3XVR2_BRAFL 147 RCTSTIEGHsEAVISVAFSPSGRFLASGSGDTTVRFWD 184 6999*****54488**************99*******9 PP == domain 2 score: 35.3 bits; conditional E-value: 2.1e-10 EEEEEESSSS.EEEEEEETTSSEEEEEET...TSEEEEEE CS WD40 3 clrtltGHss.vtslafspdgawlasGsd...DgtvriWd 38 + +t++GHs+ + +la+ pdg+ lasG++ DgtvriWd tr|C3XVR2|C3XVR2_BRAFL 190 PKYTCKGHSHwILALAWAPDGRKLASGCKnaqDGTVRIWD 229 67899***667****************86666*******9 PP == domain 3 score: 25.7 bits; conditional E-value: 2.2e-07 EEEEEEESS.SSEEEEEEETTSSE.....EEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw.....lasGsdDgtvriW 37 ++l +l GH +svt++ +w + ++s D+t+++W tr|C3XVR2|C3XVR2_BRAFL 234 RTLLSLNGHlQSVTCV------KWggeglIYTASQDRTIKVW 269 678899**********......6666665589********** PP >> tr|C3Z4X0|C3Z4X0_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_225597 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 13.4 0.0 0.0017 0.18 8 38 .] 9 39 .. 3 39 .. 0.83 2 ! 14.0 0.0 0.0011 0.11 5 38 .] 47 81 .. 43 81 .. 0.85 3 ! 26.4 0.0 1.3e-07 1.3e-05 2 38 .] 88 125 .. 87 125 .. 0.92 4 ! 13.1 0.0 0.002 0.21 13 38 .] 142 167 .. 129 167 .. 0.85 5 ? 5.9 0.1 0.39 41 13 29 .. 183 200 .. 173 214 .. 0.75 6 ! 19.2 0.0 2.5e-05 0.0026 5 38 .] 222 259 .. 219 259 .. 0.81 Alignments for each domain: == domain 1 score: 13.4 bits; conditional E-value: 0.0017 ESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGHss.vtslafspdgawlasGsdDgtvriWd 38 +Hs+ vt+la + g l +Gs D+tv ++d tr|C3Z4X0|C3Z4X0_BRAFL 9 QAHSDaVTCLAPVRPGLCL-TGSSDKTVVLYD 39 589555****988888887.7988******98 PP == domain 2 score: 14.0 bits; conditional E-value: 0.0011 EEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGHss.vtslafspdgawlasGsdDgtvriWd 38 r ++GHs vt +a+s + +s+s+D+tv +W+ tr|C3Z4X0|C3Z4X0_BRAFL 47 RRWSGHSReVTKVAYSAGLDAAFSASRDKTVLMWK 81 5679**557****99999999999**********6 PP == domain 3 score: 26.4 bits; conditional E-value: 1.3e-07 EEEEEEESSSS..EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGHss..vtslafspdgawlasGsdDgtvriWd 38 +++r ++GH v +l +pd++ +++Gs+D+++r+Wd tr|C3Z4X0|C3Z4X0_BRAFL 88 NPIRAFRGH-TmvVMGLTINPDNTQVCTGSRDNSLRMWD 125 68999****.5568************************9 PP == domain 4 score: 13.1 bits; conditional E-value: 0.002 EEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 13 vtslafspdgawla.sGsdDgtvriWd 38 vt++++ p ++++a +G D+ +++Wd tr|C3Z4X0|C3Z4X0_BRAFL 142 VTDICWVPGQQMVAqTGE-DKALKLWD 167 9************99988.*******9 PP == domain 5 score: 5.9 bits; conditional E-value: 0.39 E.EEEEEETTSSEEEEEE CS WD40 13 v.tslafspdgawlasGs 29 + t++++s+dg++ ++ s tr|C3Z4X0|C3Z4X0_BRAFL 183 IqTCCDVSRDGNYCLTTS 200 779**********87755 PP == domain 6 score: 19.2 bits; conditional E-value: 2.5e-05 EEEESS..SS........EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH..ss........vtslafspdgawlasGsdDgtvriWd 38 ++ GH + v s+ +++a++s D+tvriWd tr|C3Z4X0|C3Z4X0_BRAFL 222 CEYHGHreTAsacaflppVLSQ------PLVATASHDCTVRIWD 259 5678897522578888889999......****9999*******9 PP >> tr|C3XVA7|C3XVA7_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_124792 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 32.7 0.0 1.3e-09 1.4e-07 5 38 .] 82 116 .. 78 116 .. 0.90 2 ? 2.7 0.0 4 4.2e+02 13 36 .. 137 161 .. 123 163 .. 0.74 3 ? 10.9 0.0 0.011 1.1 12 38 .] 189 215 .. 174 215 .. 0.84 4 ? 2.4 0.0 5.1 5.3e+02 15 37 .. 235 257 .. 220 258 .. 0.76 5 ! 23.7 0.5 9.8e-07 0.0001 6 38 .] 275 308 .. 271 308 .. 0.93 6 ! 15.6 0.0 0.00034 0.035 9 36 .. 369 396 .. 360 396 .. 0.88 Alignments for each domain: == domain 1 score: 32.7 bits; conditional E-value: 1.3e-09 EEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGHss.vtslafspdgawlasGsdDgtvriWd 38 ++l+GHs+ v +l+fs + ++la++ +D+tvriW+ tr|C3XVA7|C3XVA7_BRAFL 82 TSLKGHSGrVMGLDFSNNAKYLATCAEDRTVRIWS 116 579***445*************************5 PP == domain 2 score: 2.7 bits; conditional E-value: 4 EEEEEEETTSSEEEEE.ETTSEEEE CS WD40 13 vtslafspdgawlasG.sdDgtvri 36 ts++fspd++ ++ + +t+r+ tr|C3XVA7|C3XVA7_BRAFL 137 ATSVKFSPDNRAFIVAlYNGNTIRV 161 4899*****9987766545666666 PP == domain 3 score: 10.9 bits; conditional E-value: 0.011 SEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriWd 38 ++ +l s++g++++++ D ++++W+ tr|C3XVA7|C3XVA7_BRAFL 189 DIVGLGISSNGKFMMTAFADTSIYVWN 215 4666779**********89*******8 PP == domain 4 score: 2.4 bits; conditional E-value: 5.1 EEEEETTSSEE.EEEETTSEEEEE CS WD40 15 slafspdgawl.asGsdDgtvriW 37 + a+sp g+++ +sG + v++W tr|C3XVA7|C3XVA7_BRAFL 235 HAAVSPCGRFIgCSGF-TPDVKVW 257 5568******966666.9*****9 PP == domain 5 score: 23.7 bits; conditional E-value: 9.8e-07 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +l+GH s+v+s++f+ d++ ++s s+Dgt r+Wd tr|C3XVA7|C3XVA7_BRAFL 275 ELKGHsSGVYSFDFNVDSSRMVSVSKDGTWRLWD 308 689**777**************99*********9 PP == domain 6 score: 15.6 bits; conditional E-value: 0.00034 SS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvri 36 H +vt++af+ +++l+s++ D++vr+ tr|C3XVA7|C3XVA7_BRAFL 369 VHaEPVTAVAFDLGSKYLVSAG-DKHVRV 396 69888*****************.****97 PP >> tr|C3ZBQ5|C3ZBQ5_BRAFL Ribosome biogenesis protein BOP1 homolog OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_1136 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 33.1 0.1 1e-09 1.1e-07 6 37 .. 267 299 .. 262 300 .. 0.90 2 ? 6.4 0.1 0.28 29 9 36 .. 314 340 .. 304 342 .. 0.74 3 ? 4.5 0.0 1.1 1.2e+02 12 38 .] 440 466 .. 425 466 .. 0.85 4 ? 6.9 0.0 0.19 19 9 34 .. 478 504 .. 470 508 .. 0.81 5 ? 10.4 0.0 0.015 1.6 5 36 .. 517 549 .. 513 549 .. 0.81 6 ! 22.0 0.0 3.2e-06 0.00033 3 37 .. 566 605 .. 564 606 .] 0.82 Alignments for each domain: == domain 1 score: 33.1 bits; conditional E-value: 1e-09 EEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 6 tltGHss.vtslafspdgawlasGsdDgtvriW 37 +++GH++ v+++++ p g+wl+sGsdD t+r+W tr|C3ZBQ5|C3ZBQ5_BRAFL 267 VYEGHTDvVRCISVEPTGQWLVSGSDDETLRFW 299 699**8857************************ PP == domain 2 score: 6.4 bits; conditional E-value: 0.28 SSSSEEEEEEETTSSE.EEEEETTSEEEE CS WD40 9 GHssvtslafspdgaw.lasGsdDgtvri 36 G v+s+a++p++a l+++ D tv i tr|C3ZBQ5|C3ZBQ5_BRAFL 314 G--RVRSVAWCPNSAVcLVAAVVDSTVII 340 3..39***********6556667999987 PP == domain 3 score: 4.5 bits; conditional E-value: 1.1 S.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 s.vtslafspdgawlasGsdDgtvriWd 38 + v ++ f+p ++l+ ++ + vr+++ tr|C3ZBQ5|C3ZBQ5_BRAFL 440 GlVQCVLFHPIRPFLFVAT-QRYVRVYN 466 3699***********9999.******97 PP == domain 4 score: 6.9 bits; conditional E-value: 0.19 SS.SSEEEEEEETTSSEEEEEETTSEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtv 34 + ++v+s+a++p g+ l+ Gs+D + tr|C3ZBQ5|C3ZBQ5_BRAFL 478 ANcKWVSSMAVHPGGDNLIIGSYDSRL 504 66678*****************99876 PP == domain 5 score: 10.4 bits; conditional E-value: 0.015 EEEESS.SS.EEEEEEETTSSEEEEEETTSEEEE CS WD40 5 rtltGH.ss.vtslafspdgawlasGsdDgtvri 36 +tl+ H + + +++++ +++as+sdDgtv i tr|C3ZBQ5|C3ZBQ5_BRAFL 517 QTLR-HqKRaLRQVCYHKKYPLFASASDDGTVVI 549 5666.545568999******************86 PP == domain 6 score: 22.0 bits; conditional E-value: 3.2e-06 EEEEEESSSSEE......EEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGHssvt......slafspdgawlasGsdDgtvriW 37 ++++l+GH vt ++ f+p ++w++s++ D tvr++ tr|C3ZBQ5|C3ZBQ5_BRAFL 566 PVKILRGH-KVTqnlgamDCEFHPTQPWIFSCGADTTVRLY 605 7899****.565555544777**********999*****97 PP >> tr|C3YXJ5|C3YXJ5_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_74529 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 23.7 0.0 9.7e-07 0.0001 6 37 .. 32 64 .. 29 65 .. 0.90 2 ? 7.5 0.1 0.12 13 5 38 .] 76 110 .. 70 110 .. 0.70 3 ! 13.0 0.0 0.0023 0.24 4 38 .] 117 153 .. 114 153 .. 0.90 4 ? 4.6 0.0 1 1.1e+02 12 38 .] 176 203 .. 166 203 .. 0.73 5 ! 15.5 0.0 0.00037 0.039 7 37 .. 536 571 .. 530 572 .. 0.88 6 ! 21.0 0.1 6.7e-06 0.0007 3 38 .] 578 614 .. 576 614 .. 0.90 Alignments for each domain: == domain 1 score: 23.7 bits; conditional E-value: 9.7e-07 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriW 37 +l+GH ++v++l ++ g++lasGsdD + iW tr|C3YXJ5|C3YXJ5_BRAFL 32 ELSGHsGCVNCLEWNEQGNLLASGSDDLNAIIW 64 699**666*******************999999 PP == domain 2 score: 7.5 bits; conditional E-value: 0.12 EEEESS.SSEEEEE..EETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtsla..fspdgawlasGsdDgtvriWd 38 r tGH +++ s++ s+ + +a++ D++v++ d tr|C3YXJ5|C3YXJ5_BRAFL 76 R--TGHqGNIFSVKflPSSGDRIVATAAADCKVHVHD 110 4..4**777****9754444444677877***99865 PP == domain 3 score: 13.0 bits; conditional E-value: 0.0023 EEEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 ++++t H + v la+ p+ ++++ s+s+Dgt+r +d tr|C3YXJ5|C3YXJ5_BRAFL 117 TQVFTCHtGRVKRLATAPNVPYMFwSASEDGTIRQFD 153 6899***666*************9*9********987 PP == domain 4 score: 4.6 bits; conditional E-value: 1 SEEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 12 svtslafspdgawl.asGsdDgtvriWd 38 v +++ +p + + a+G D+ +r++d tr|C3YXJ5|C3YXJ5_BRAFL 176 EVKCISINPRRPEImAAGANDPYIRMYD 203 38899988888887257778******98 PP == domain 5 score: 15.5 bits; conditional E-value: 0.00037 EESS.SSEEEEE....EETTSSEEEEEETTSEEEEE CS WD40 7 ltGH.ssvtsla....fspdgawlasGsdDgtvriW 37 + GH + t+++ f +g+++++GsdDg+ +W tr|C3YXJ5|C3YXJ5_BRAFL 536 FCGHcNTTTDIKeanfFGNNGQYIVAGSDDGSFFMW 571 669977789999999********************* PP == domain 6 score: 21.0 bits; conditional E-value: 6.7e-06 EEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 +r+l+G +s v++l+ +p++ +la+++ D+ vr+W+ tr|C3YXJ5|C3YXJ5_BRAFL 578 IVRVLRGDDSiVNCLQPHPSHCLLATSGIDPVVRLWS 614 68999**95548************************5 PP >> tr|C3Y441|C3Y441_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_128129 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.9 0.7 1.7e-06 0.00018 5 36 .. 28 60 .. 24 61 .. 0.87 2 ! 25.9 0.5 1.9e-07 2e-05 6 38 .] 73 107 .. 69 107 .. 0.85 3 ? 5.8 0.0 0.43 45 15 29 .. 125 139 .. 112 148 .. 0.82 4 ! 27.8 0.1 4.8e-08 5e-06 2 38 .] 194 231 .. 193 231 .. 0.91 5 ? 10.8 0.0 0.012 1.2 3 31 .. 237 266 .. 235 269 .. 0.78 6 ? 4.3 0.0 1.2 1.3e+02 15 32 .. 291 308 .. 279 311 .. 0.81 Alignments for each domain: == domain 1 score: 22.9 bits; conditional E-value: 1.7e-06 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvri 36 + +++H s v+s+a+s dg+ lasGs D+tv + tr|C3Y441|C3Y441_BRAFL 28 KDFSAHsSKVHSVAWSCDGRRLASGSFDKTVTV 60 5699**555*********************965 PP == domain 2 score: 25.9 bits; conditional E-value: 1.9e-07 EEESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 ++GH +sv l+++p+++ l+ ++s D+t+riWd tr|C3Y441|C3Y441_BRAFL 73 NFRGHgDSVDQLCWHPSSPDLLvTASGDKTIRIWD 107 589**888*****99999996437766*******9 PP == domain 3 score: 5.8 bits; conditional E-value: 0.43 EEEEETTSSEEEEEE CS WD40 15 slafspdgawlasGs 29 +++spdg+ +a G tr|C3Y441|C3Y441_BRAFL 125 NICWSPDGQTIAVGN 139 689********9885 PP == domain 4 score: 27.8 bits; conditional E-value: 4.8e-08 EEEEEEESS..SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH..ssvtslafspdgawlasGsdDgtvriWd 38 ++l+tl++H +++ +++f+p g+++a+Gs D v +Wd tr|C3Y441|C3Y441_BRAFL 194 KQLQTLSAHsaNCI-CIKFDPTGKYFATGSVDALVSLWD 231 6799*****75558.999********************9 PP == domain 5 score: 10.8 bits; conditional E-value: 0.012 EEEEEESSSS.EEEEEEETTSSEEEEEETT CS WD40 3 clrtltGHss.vtslafspdgawlasGsdD 31 c+rt++ ++ v+ l+fs+dg++las+s+D tr|C3Y441|C3Y441_BRAFL 237 CVRTFSRLDWpVRTLSFSHDGQMLASASED 266 666665222259***************988 PP == domain 6 score: 4.3 bits; conditional E-value: 1.2 EEEEETTSSEEE.EEETTS CS WD40 15 slafspdgawla.sGsdDg 32 +a++p++++la +++ D+ tr|C3Y441|C3Y441_BRAFL 291 TVAWHPSKPLLAfACD-DK 308 589********85665.54 PP >> tr|C4A021|C4A021_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_58026 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 13.9 0.3 0.0012 0.12 7 38 .] 173 206 .. 167 206 .. 0.71 2 ! 13.3 0.3 0.0019 0.19 5 38 .] 221 256 .. 218 256 .. 0.74 3 ! 31.5 0.0 3.2e-09 3.3e-07 2 38 .] 264 302 .. 263 302 .. 0.90 4 ! 21.2 0.1 5.7e-06 0.00059 4 38 .] 310 346 .. 308 346 .. 0.85 5 ! 19.0 0.1 2.8e-05 0.003 4 37 .. 367 402 .. 364 403 .. 0.85 Alignments for each domain: == domain 1 score: 13.9 bits; conditional E-value: 0.0012 EESS..SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 7 ltGH..ssvtslafspdgaw.lasGsdDgtvriWd 38 l+GH + ++l+++p+ + l+s+sdD+t+ +Wd tr|C4A021|C4A021_BRAFL 173 LKGHqkEG-YGLSWNPNLTGhLLSASDDHTICMWD 206 56775322.4676666666646799*********9 PP == domain 2 score: 13.3 bits; conditional E-value: 0.0019 EEEESSSS.EEEEEEETTSSE......EEEEE..TTSEEEEEE CS WD40 5 rtltGHss.vtslafspdgaw......lasGs..dDgtvriWd 38 +++tGH+ v ++ +w l+ Gs dD++++iWd tr|C4A021|C4A021_BRAFL 221 TIFTGHTAvVEDV------SWhllhesLF-GSvaDDQKLMIWD 256 579***7757***......5544444488.76458*******9 PP == domain 3 score: 31.5 bits; conditional E-value: 3.2e-09 EEEEEEESS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawl.asGsdDgtvriWd 38 ++ +t ++H v++l+f+p++ ++ a+Gs D+tv +Wd tr|C4A021|C4A021_BRAFL 264 KPSHTVDAHtAEVNCLSFNPYSEFIlATGSADKTVALWD 302 6899*****777************6379**********9 PP == domain 4 score: 21.2 bits; conditional E-value: 5.7e-06 EEEEESSSS.EEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 4 lrtltGHss.vtslafspdgawla.sGsdDgtvriWd 38 l++++ H++ + +++sp++ ++ s++ D+ + +Wd tr|C4A021|C4A021_BRAFL 310 LHSFESHKDeIFQVQWSPHNETILaSSGTDRRLNVWD 346 89*****556************7525567*******9 PP == domain 5 score: 19.0 bits; conditional E-value: 2.8e-05 EEEEESS.SSEEEEEEETTSSEEEEE.ETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasG.sdDgtvriW 37 l + GH +++++++p+ +w++++ s+D+ +W tr|C4A021|C4A021_BRAFL 367 LFIHGGHtAKISDFSWNPNEPWVICSvSEDNIMQVW 402 56667**666************9977799****999 PP >> tr|C3Z6R8|C3Z6R8_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_69097 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 11.3 0.1 0.0081 0.84 4 37 .. 415 451 .. 412 452 .. 0.82 2 ! 14.0 1.4 0.0011 0.11 1 38 [] 456 498 .. 456 498 .. 0.74 3 ? 9.1 0.0 0.039 4.1 15 37 .. 637 657 .. 621 657 .. 0.75 4 ! 13.0 0.2 0.0023 0.24 5 38 .] 707 741 .. 701 741 .. 0.80 5 ? 9.3 0.0 0.032 3.4 14 38 .] 759 783 .. 745 783 .. 0.83 6 ? 5.8 0.0 0.42 44 7 28 .. 793 815 .. 787 822 .. 0.80 7 ! 14.0 0.2 0.0011 0.11 10 38 .] 942 970 .. 934 970 .. 0.92 8 ? 5.7 0.0 0.45 47 4 31 .. 979 1006 .. 977 1011 .. 0.84 9 ? 10.9 0.0 0.01 1.1 4 38 .] 1238 1278 .. 1236 1278 .. 0.82 10 ! 12.9 0.2 0.0025 0.26 3 37 .. 1286 1321 .. 1283 1322 .. 0.79 11 ? 1.6 0.0 9 9.4e+02 14 38 .] 1399 1422 .. 1386 1422 .. 0.80 Alignments for each domain: == domain 1 score: 11.3 bits; conditional E-value: 0.0081 EEEEESS.SSEEEEEEETTSSEEEE...EETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlas...GsdDgtvriW 37 +r l GH + v++l+f+ ++++las Gs vr+W tr|C3Z6R8|C3Z6R8_BRAFL 415 QRFLIGHtDKVSALSFDGYSRLLASaqtGS-TAVVRVW 451 67899**555*************9633367.9999999 PP == domain 2 score: 14.0 bits; conditional E-value: 0.0011 TEEEEEEESS.SSEEEEEEETTSSEEEEE.ET....TSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasG.sd....DgtvriWd 38 g+cl ++++H s +sl+fs+dg+ l+ G ++ ++ v +Wd tr|C3Z6R8|C3Z6R8_BRAFL 456 GECLSVFKTHvHSAHSLSFSQDGDVLC-GvGKdghgKNMVVVWD 498 68********65579999*******95.6655223366666666 PP == domain 3 score: 9.1 bits; conditional E-value: 0.039 EEEEETTSSEEEEEETTSEEEEE CS WD40 15 slafspdgawlasGsdDgtvriW 37 ++ + ++ ++GsdDg +r+W tr|C3Z6R8|C3Z6R8_BRAFL 637 AI--YVNESFCVTGSDDGYLRLW 657 44..55677889*********** PP == domain 4 score: 13.0 bits; conditional E-value: 0.0023 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++ + H + +++++ + a +a+ s D+t+r+Wd tr|C3Z6R8|C3Z6R8_BRAFL 707 TVMRSHtDRISDMSLDLTRAHIATVSADHTIRVWD 741 456799555999988888888999999*******9 PP == domain 5 score: 9.3 bits; conditional E-value: 0.032 EEEEEETTSSEEEEEETTSEEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriWd 38 +++a++p+++ la+G ++g vr+++ tr|C3Z6R8|C3Z6R8_BRAFL 759 CAVAYHPSQQVLACGFENGCVRVFN 783 799************9*******97 PP == domain 6 score: 5.8 bits; conditional E-value: 0.42 EESS.SSEEEEEEETTSSEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasG 28 + H + v +l fsp+g++l s+ tr|C3Z6R8|C3Z6R8_BRAFL 793 HKQHrGKVVGLTFSPSGSYLYSA 815 456766699***********976 PP == domain 7 score: 14.0 bits; conditional E-value: 0.0011 S.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvriWd 38 H ss ++la+s+d + l++++ D+ v++Wd tr|C3Z6R8|C3Z6R8_BRAFL 942 HrSSCSALAVSQDCRHLVTAG-DKVVKVWD 970 77778999*************.*******9 PP == domain 8 score: 5.7 bits; conditional E-value: 0.45 EEEEESS.SSEEEEEEETTSSEEEEEETT CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdD 31 +++ GH ++++ f pdga l++ + D tr|C3Z6R8|C3Z6R8_BRAFL 979 FQVFIGHsEAISGVGFTPDGAGLVTVG-D 1006 57899**555***********999866.4 PP == domain 9 score: 10.9 bits; conditional E-value: 0.01 EEEEESS.SSEEEEEEETTSSEEE..EEET...TSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawla..sGsd...DgtvriWd 38 +++ltGH v+ la + d + l+ sGs+ + v +Wd tr|C3Z6R8|C3Z6R8_BRAFL 1238 QKHLTGHvEEVSTLALQNDCQVLVsaSGSRglvKSQVCVWD 1278 79*****888*****9******97224554666*******9 PP == domain 10 score: 12.9 bits; conditional E-value: 0.0025 EEEEEESSSSEEEEEEETTSSEEEEEET..TSEEEEE CS WD40 3 clrtltGHssvtslafspdgawlasGsd..DgtvriW 37 ++ ++ H ++ +la+s+d ++l++ +d +t+ +W tr|C3Z6R8|C3Z6R8_BRAFL 1286 QVLHYHQH-DIVCLAYSRDDRFLVTVGDyrECTIALW 1321 46678888.899***********98664349999888 PP == domain 11 score: 1.6 bits; conditional E-value: 9 EEEEEETTSSEEEEEETTSEEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriWd 38 t+l++s d+ + + Gs +g v Wd tr|C3Z6R8|C3Z6R8_BRAFL 1399 TALCYSADNILYVGGS-NGVVSAWD 1422 899*******966556.****9998 PP >> tr|C3ZJ75|C3ZJ75_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_124768 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.6 0.0 0.026 2.7 9 38 .] 5 35 .. 1 35 [. 0.86 2 ? 1.5 0.1 9.6 1e+03 5 35 .. 43 72 .. 39 78 .. 0.72 3 ! 32.4 0.3 1.6e-09 1.7e-07 4 37 .. 83 117 .. 80 117 .. 0.93 4 ! 20.2 0.2 1.2e-05 0.0012 3 38 .] 128 167 .. 126 167 .. 0.81 5 ? 7.6 0.1 0.12 12 2 38 .] 172 210 .. 169 210 .. 0.73 6 ! 23.8 0.0 8.5e-07 8.8e-05 4 38 .] 217 252 .. 214 252 .. 0.90 Alignments for each domain: == domain 1 score: 9.6 bits; conditional E-value: 0.026 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 G + v+++++ +g++la Gs + v +Wd tr|C3ZJ75|C3ZJ75_BRAFL 5 GPeDYVSAVSWIAEGNFLAIGSSNAEVQLWD 35 5534499**************88*******9 PP == domain 2 score: 1.5 bits; conditional E-value: 9.6 EEEESS.SSEEEEEEETTSSE....EEEEETTSEEE CS WD40 5 rtltGH.ssvtslafspdgaw....lasGsdDgtvr 35 r t + s v sl +w l+sGs+ gt++ tr|C3ZJ75|C3ZJ75_BRAFL 43 RNMTSQsSRVGSL------DWnvyiLSSGSRAGTIH 72 5556663448999......88888778999877775 PP == domain 3 score: 32.4 bits; conditional E-value: 1.6e-09 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 + tl+GH + v++l++spdg++lasG+ D+ + iW tr|C3ZJ75|C3ZJ75_BRAFL 83 VATLDGHtQEVCGLKWSPDGRYLASGGNDNLLNIW 117 7899***888************************* PP == domain 4 score: 20.2 bits; conditional E-value: 1.2e-05 EEEEEESS.SSEEEEEEETTSSE.EEEEE..TTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw.lasGs..dDgtvriWd 38 +l++lt H v +l+++p +a lasG+ D+ +r+W+ tr|C3ZJ75|C3ZJ75_BRAFL 128 PLHSLTQHqAAVKALSWCPWQASvLASGGgtADRCIRFWN 167 89******777****88888888446774447*******8 PP == domain 5 score: 7.6 bits; conditional E-value: 0.12 EEEEEEESSSSEEEEEEETTSSEEEEEE..TTSEEEEEE CS WD40 2 qclrtltGHssvtslafspdgawlasGs..dDgtvriWd 38 cl t ++ s v+s+ +s++ + l+sG+ ++ + iW+ tr|C3ZJ75|C3ZJ75_BRAFL 172 HCLNTVDTKSQVCSILWSKEYKELISGHgfANNQLTIWK 210 34444443344999*9**********9645699999995 PP == domain 6 score: 23.8 bits; conditional E-value: 8.5e-07 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++ltGH v ++a spdg+ ++s+ D t+r+W+ tr|C3ZJ75|C3ZJ75_BRAFL 217 VTELTGHqARVLHMAMSPDGTTVVSAAADETLRLWK 252 7889***666**************9988*******6 PP >> tr|C3Z7M9|C3Z7M9_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_119001 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 8.8 0.0 0.048 5 13 38 .] 5 29 .. 2 29 .. 0.93 2 ! 20.5 0.1 9.3e-06 0.00097 11 38 .] 46 73 .. 35 73 .. 0.86 3 ! 13.6 0.0 0.0015 0.15 2 38 .] 80 116 .. 79 116 .. 0.95 4 ? 3.2 0.0 2.7 2.9e+02 12 37 .. 132 157 .. 120 158 .. 0.86 5 ! 18.1 0.0 5.7e-05 0.006 15 37 .. 185 207 .. 171 208 .. 0.81 6 ! 19.3 0.4 2.3e-05 0.0024 12 37 .. 232 258 .. 221 258 .. 0.82 Alignments for each domain: == domain 1 score: 8.8 bits; conditional E-value: 0.048 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 v+sl pd +++a+++ +++r++d tr|C3Z7M9|C3Z7M9_BRAFL 5 VNSLEITPDRQMIAAAG-YQHIRMYD 29 99************99*.******98 PP == domain 2 score: 20.5 bits; conditional E-value: 9.3e-06 SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriWd 38 ++vts+ f+ dg+w+ +G +D riWd tr|C3Z7M9|C3Z7M9_BRAFL 46 KNVTSVGFHEDGKWMYTGREDSCARIWD 73 56****************9********9 PP == domain 3 score: 13.6 bits; conditional E-value: 0.0015 EEEEEEESSSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGHssvtslafspdgawlasGsdDgtvriWd 38 qc+r++ +++++ +p++ l+ G+ g +++Wd tr|C3Z7M9|C3Z7M9_BRAFL 80 QCQRIFQVNAPINCVTLHPNQGELIVGDQTGAIHVWD 116 8******9999************999**********9 PP == domain 4 score: 3.2 bits; conditional E-value: 2.7 SEEEEEEETTSSEEEEEETTSEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriW 37 s+ s++ + d +++a+ +g +++W tr|C3Z7M9|C3Z7M9_BRAFL 132 SIQSVSIDADASYMAAVNNKGMCYVW 157 4999*********998878****999 PP == domain 5 score: 18.1 bits; conditional E-value: 5.7e-05 EEEEETTSSEEEEEETTSEEEEE CS WD40 15 slafspdgawlasGsdDgtvriW 37 ++fspd+++la+ s D++v iW tr|C3Z7M9|C3Z7M9_BRAFL 185 KCKFSPDSTLLATTSADQSVNIW 207 567*********9999******* PP == domain 6 score: 19.3 bits; conditional E-value: 2.3e-05 S.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 12 s.vtslafspdgawlasGsdDgtvriW 37 v+++a+s+d+++l+++s D+ r+W tr|C3Z7M9|C3Z7M9_BRAFL 232 RwVWDCAWSSDSQYLVTASSDNMARLW 258 259*************9988******* PP >> tr|C3XUD8|C3XUD8_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_214362 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 7.6 0.0 0.11 12 18 38 .] 21 41 .. 7 41 .. 0.83 2 ? 4.0 0.1 1.6 1.6e+02 13 28 .. 62 78 .. 47 85 .. 0.69 3 ? 8.0 0.0 0.084 8.7 13 38 .] 109 134 .. 88 134 .. 0.84 4 ! 23.6 0.0 1e-06 0.00011 5 38 .] 140 177 .. 136 177 .. 0.80 5 ! 20.6 0.2 8.9e-06 0.00093 4 38 .] 189 224 .. 186 224 .. 0.91 6 ? 5.3 0.1 0.63 66 4 38 .] 269 310 .. 267 310 .. 0.62 7 ! 22.4 0.1 2.3e-06 0.00024 2 37 .. 315 351 .. 314 352 .. 0.90 Alignments for each domain: == domain 1 score: 7.6 bits; conditional E-value: 0.11 EETTSSEEEEEETTSEEEEEE CS WD40 18 fspdgawlasGsdDgtvriWd 38 +s++g+ ++s++ D+++r+++ tr|C3XUD8|C3XUD8_BRAFL 21 YSHNGSVFLSACQDQNIRLYN 41 89999999999********97 PP == domain 2 score: 4.0 bits; conditional E-value: 1.6 EEEEEEETTSSEEE.EE CS WD40 13 vtslafspdgawla.sG 28 v + afspdg +l+ s+ tr|C3XUD8|C3XUD8_BRAFL 62 VLDTAFSPDGCYLIySS 78 55667*******97454 PP == domain 3 score: 8.0 bits; conditional E-value: 0.084 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 + sl fs+d++ ++ G Dg ++i+d tr|C3XUD8|C3XUD8_BRAFL 109 IFSLTFSSDNKEVLGGANDGCLYIYD 134 88999*********7778******98 PP == domain 4 score: 23.6 bits; conditional E-value: 1e-06 EEEE..SS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 5 rtlt..GH.ssvtslafspdgawla.sGsdDgtvriWd 38 rtl+ H ++v+++a+ +d++ ++ sG+dDg +r+Wd tr|C3XUD8|C3XUD8_BRAFL 140 RTLRieSHeDDVNAVAYADDSSQILySGGDDGLCRVWD 177 5554449*889*****8888888655***********9 PP == domain 5 score: 20.6 bits; conditional E-value: 8.9e-06 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++tl GH +++t ++ d + l+s s+D+t+++Wd tr|C3XUD8|C3XUD8_BRAFL 189 VGTLAGHsDGITFIDSKADARHLISNSKDQTIKLWD 224 78999**666**************88*********9 PP == domain 6 score: 5.3 bits; conditional E-value: 0.63 EEEEESSSSE.EEEE...EETTSSE....EEEEETTSEEEEEE CS WD40 4 lrtltGHssv.tsla...fspdgaw....lasGsdDgtvriWd 38 l t++GH +v + l fsp ++ + sG+ g+v ++d tr|C3XUD8|C3XUD8_BRAFL 269 LMTYRGH-GVlHTLVrcrFSPVHTTgqrfIYSGCSTGSVVVYD 310 7899***.64343333445554444555477996699999887 PP == domain 7 score: 22.4 bits; conditional E-value: 2.3e-06 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 q + +l+GH +v++++++p+ + ++s ++Dg v +W tr|C3XUD8|C3XUD8_BRAFL 315 QIVEKLRGHkACVRDVSWHPYEPKIMSTGWDGIVGLW 351 677889***666************************9 PP >> tr|C3Y4Q5|C3Y4Q5_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_212060 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.9 0.3 1.7e-06 0.00018 2 38 .] 27 66 .. 26 66 .. 0.88 2 ! 20.1 1.8 1.3e-05 0.0013 4 38 .] 82 115 .. 80 115 .. 0.91 3 ? 6.1 0.0 0.34 35 15 38 .] 140 155 .. 121 155 .. 0.85 4 ! 30.1 0.0 8.7e-09 9.1e-07 2 38 .] 161 196 .. 160 196 .. 0.96 5 ? 10.9 0.0 0.011 1.1 4 36 .. 244 275 .. 241 275 .. 0.82 Alignments for each domain: == domain 1 score: 22.9 bits; conditional E-value: 1.7e-06 EEEEEEE..SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtlt..GH.ssvtslafspdgawlasGsdDgtvriWd 38 ++++++t GH v ++ ++g++ +sGs+D+t +iWd tr|C3Y4Q5|C3Y4Q5_BRAFL 27 ENIHHFTldGHfATVDAVHLIQNGTMCVSGSRDRTAKIWD 66 578887666**766*99999*******************9 PP == domain 2 score: 20.1 bits; conditional E-value: 1.3e-05 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++l+ H ++v++l s+ + l++Gs+D +++Wd tr|C3Y4Q5|C3Y4Q5_BRAFL 82 VKSLEQHrGWVWCL--SSLDNILCTGSWDTAIKLWD 115 68999**999****..88888899***********9 PP == domain 3 score: 6.1 bits; conditional E-value: 0.34 EEEEETTSSEEEEEETTSEEEEEE CS WD40 15 slafspdgawlasGsdDgtvriWd 38 ++ l++Gs+D+ + ++d tr|C3Y4Q5|C3Y4Q5_BRAFL 140 DI--------LVAGSYDKRISVYD 155 44........999*********98 PP == domain 4 score: 30.1 bits; conditional E-value: 8.7e-09 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 q+++tl+ H ++v ++ d ++++s+s+D+tv++Wd tr|C3Y4Q5|C3Y4Q5_BRAFL 161 QPITTLRQHqKPVLCV--AADEDYIISCSEDKTVKVWD 196 8999*****999****..99*****************9 PP == domain 5 score: 10.9 bits; conditional E-value: 0.011 EEEEESS.SSEEEEEEETTSSE....EEEEETTSEEEE CS WD40 4 lrtltGH.ssvtslafspdgaw....lasGsdDgtvri 36 + t+++H + vt++ ++ l ++s D+t+++ tr|C3Y4Q5|C3Y4Q5_BRAFL 244 METIEAHgNKVTGV------HYtlggLYTCSTDKTIKV 275 567899*888****......666688889999****97 PP >> tr|C3ZF43|C3ZF43_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_70886 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 8.7 0.0 0.051 5.3 20 37 .. 34 51 .. 16 51 .. 0.57 2 ? 2.8 0.0 3.8 4e+02 5 32 .. 108 136 .. 105 138 .. 0.84 3 ! 34.1 0.2 5e-10 5.2e-08 3 38 .] 192 228 .. 190 228 .. 0.94 4 ! 20.6 0.0 9.2e-06 0.00095 6 38 .] 238 271 .. 233 271 .. 0.91 5 ! 17.7 0.2 7.3e-05 0.0076 10 38 .] 368 395 .. 358 395 .. 0.82 Alignments for each domain: == domain 1 score: 8.7 bits; conditional E-value: 0.051 TTSSEEEEEETTSEEEEE CS WD40 20 pdgawlasGsdDgtvriW 37 p + ++s +dD+tvr+W tr|C3ZF43|C3ZF43_BRAFL 34 PKEDGVISVCDDRTVRVW 51 33333555666******* PP == domain 2 score: 2.8 bits; conditional E-value: 3.8 EEEESS.SSEEEEEEETTSSEEEEEETTS CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDg 32 r + +H + v ++ fs wl+s ++D+ tr|C3ZF43|C3ZF43_BRAFL 108 RNYLAHqQRVVGINFSLQCEWLLSVGRDK 136 56779977799***********9988886 PP == domain 3 score: 34.1 bits; conditional E-value: 5e-10 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++tl+GH +s+++l ++p++++l+sGs D+++ +Wd tr|C3ZF43|C3ZF43_BRAFL 192 QVTTLKGHsGSIRCLEWDPESRLLFSGSFDQSIIVWD 228 5789****777*************************9 PP == domain 4 score: 20.6 bits; conditional E-value: 9.2e-06 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +l GH + v +l+f + + l+sG++Dg + iW+ tr|C3ZF43|C3ZF43_BRAFL 238 ELQGHnNKVQGLKFVGHTKQLVSGGEDGMIVIWN 271 589**777*****9999999*************8 PP == domain 5 score: 17.7 bits; conditional E-value: 7.3e-05 SSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 HssvtslafspdgawlasGsdDgtvriWd 38 H +v ++ ++ wl++++ D+ ++iWd tr|C3ZF43|C3ZF43_BRAFL 368 H-GVVAIHYDGTRGWLLTCGTDRIIKIWD 395 4.58899999999***99999*******9 PP >> tr|C3YYY3|C3YYY3_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_118296 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 14.2 3.9 0.00098 0.1 3 38 .] 144 208 .. 142 208 .. 0.63 2 ? 10.9 0.2 0.01 1.1 12 38 .] 320 345 .. 310 345 .. 0.88 3 ! 11.2 0.3 0.0081 0.85 7 38 .] 356 388 .. 350 388 .. 0.83 4 ? 10.0 0.0 0.02 2.1 5 38 .] 444 478 .. 440 478 .. 0.92 5 ? 10.9 0.0 0.01 1.1 15 37 .. 538 560 .. 530 560 .. 0.89 6 ! 19.0 0.2 2.9e-05 0.003 3 38 .] 571 607 .. 569 607 .. 0.88 7 ? 2.6 0.1 4.3 4.5e+02 11 31 .. 647 666 .. 636 667 .. 0.80 8 ! 21.6 0.4 4.4e-06 0.00046 5 37 .. 685 719 .. 681 720 .. 0.88 Alignments for each domain: == domain 1 score: 14.2 bits; conditional E-value: 0.00098 EEEEEESS.SSEEEEEEETTSSEEEEE...ET.........................TSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasG...sd.........................DgtvriWd 38 ++r++ GH +++ +++++pd ++asG + ++++riWd tr|C3YYY3|C3YYY3_BRAFL 144 TQRHYLGHnDDIKCISVHPDRVLVASGqvgGHdrseelpcyerfdpyyknadesnwyKPHIRIWD 208 689*****666**************9544333133444444444444444444555566666665 PP == domain 2 score: 10.9 bits; conditional E-value: 0.01 SEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriWd 38 +v+++af + g+ + +G+ +g++ +W+ tr|C3YYY3|C3YYY3_BRAFL 320 FVHCIAFTHTGDVI-TGDSKGNILVWK 345 69***********7.7*66*******6 PP == domain 3 score: 11.2 bits; conditional E-value: 0.0081 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + +H ++v +l + + g ++sG+ D++v +Wd tr|C3YYY3|C3YYY3_BRAFL 356 IGAHkGGVLALHTLRGGLVMVSGGSDKKVVLWD 388 458866699999999999999*988*******9 PP == domain 4 score: 10.0 bits; conditional E-value: 0.02 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +l+GH ++la +p ++++++++ + v +W+ tr|C3YYY3|C3YYY3_BRAFL 444 SVLEGHmEELWGLAAHPFAPMFVTCDYSKQVVLWN 478 5799**999****************99*******8 PP == domain 5 score: 10.9 bits; conditional E-value: 0.01 EEEEETTSSEEEEEETTSEEEEE CS WD40 15 slafspdgawlasGsdDgtvriW 37 +l +sp+g++la Gs D+ ++i+ tr|C3YYY3|C3YYY3_BRAFL 538 CLVYSPNGRLLAVGSHDNFIYIY 560 788***********99***9996 PP == domain 6 score: 19.0 bits; conditional E-value: 2.9e-05 EEEEEESS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawl.asGsdDgtvriWd 38 +++ l+GH s+vt+l++s+d+++l ++++ D + Wd tr|C3YYY3|C3YYY3_BRAFL 571 KIGRLEGHsSFVTHLDWSSDSRFLqSTSG-DYELLYWD 607 677899**777************998999.*9999998 PP == domain 7 score: 2.6 bits; conditional E-value: 4.3 SSEEEEEEETTSSEEEEEETT CS WD40 11 ssvtslafspdgawlasGsdD 31 ++v+++a s+d ++las sdD tr|C3YYY3|C3YYY3_BRAFL 647 TDVNACAASRDRTLLAS-SDD 666 369***********985.646 PP == domain 8 score: 21.6 bits; conditional E-value: 4.4e-06 EEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgawla.sGsdDgtvriW 37 +++ GH s+vt+++f d ++l+ +G+ D v W tr|C3YYY3|C3YYY3_BRAFL 685 HIYPGHsSHVTCVRFLYDDSYLLsTGGADSAVFQW 719 89****888************8648999****999 PP >> tr|C3Z5W3|C3Z5W3_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_202877 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.0 0.0 3.2 3.3e+02 18 36 .. 426 445 .. 406 447 .. 0.83 2 ! 20.2 0.1 1.2e-05 0.0013 6 38 .] 457 490 .. 452 490 .. 0.90 3 ! 30.1 0.1 9.3e-09 9.7e-07 1 38 [] 494 530 .. 494 530 .. 0.91 4 ! 12.4 0.1 0.0034 0.36 1 38 [] 534 569 .. 534 569 .. 0.86 5 ! 12.8 0.2 0.0026 0.28 3 37 .. 575 608 .. 573 609 .. 0.79 6 ? 8.9 0.0 0.044 4.6 2 38 .] 616 650 .. 615 650 .. 0.81 Alignments for each domain: == domain 1 score: 3.0 bits; conditional E-value: 3.2 EETTSSEEEE.EETTSEEEE CS WD40 18 fspdgawlas.GsdDgtvri 36 +++dg+ l++ Gs D++vri tr|C3Z5W3|C3Z5W3_BRAFL 426 VHHDGKKLVAlGSVDRKVRI 445 578888887669*******9 PP == domain 2 score: 20.2 bits; conditional E-value: 1.2e-05 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +tGH +s+ ++ s + +++sGs+D tvr W+ tr|C3Z5W3|C3Z5W3_BRAFL 457 PITGHaGSIKCVYISEERGFVLSGSYDTTVRCWS 490 468**999*************************5 PP == domain 3 score: 30.1 bits; conditional E-value: 9.3e-09 TEEEEEEESS.SSEEEEEEETTSSE....EEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgaw....lasGsdDgtvriWd 38 g+clr+++GH + +t++ ++ l+sGs+D v++W+ tr|C3Z5W3|C3Z5W3_BRAFL 494 GNCLRIFRGHrGTITCI------DLfenrLVSGSKDSQVKVWN 530 79********988****......77777789***********8 PP == domain 4 score: 12.4 bits; conditional E-value: 0.0034 TEEEEEEESS.SSEEEEEEETTSSE...EEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgaw...lasGsdDgtvriWd 38 g+c+rt++ H +++ ++ g + ++sG+d g v++W+ tr|C3Z5W3|C3Z5W3_BRAFL 534 GKCQRTFK-HkKPILAV-----GILadrVVSGCDGGQVKVWS 569 79*****8.98999999.....55566678***********5 PP == domain 5 score: 12.8 bits; conditional E-value: 0.0026 EEEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw.lasGsdDgtvriW 37 ++++l+ H ++vt+l+f+ +w l++G++Dg W tr|C3Z5W3|C3Z5W3_BRAFL 575 LVKKLSSHqGPVTCLKFD---QWhLVTGGKDGYAFAW 608 67899***888****765...77668*****976555 PP == domain 6 score: 8.9 bits; conditional E-value: 0.044 EEEEEEESS.SSEEEEEEETTSSE....EEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw....lasGsdDgtvriWd 38 +cl+ ++ H s + +l ++ +++G+ Dg+ ri++ tr|C3Z5W3|C3Z5W3_BRAFL 616 RCLTAFR-HpSQIMCL------QFlflrVITGCSDGKMRIFN 650 5888887.8788****......996666579977******97 PP >> tr|C3Z9A3|C3Z9A3_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_100614 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 5.2 0.0 0.68 71 6 37 .. 625 657 .. 620 658 .. 0.78 2 ? 4.6 0.1 1.1 1.1e+02 16 37 .. 678 699 .. 665 700 .. 0.79 3 ! 15.3 0.6 0.00043 0.044 6 37 .. 709 739 .. 704 740 .. 0.77 4 ! 14.7 0.0 0.00066 0.068 9 38 .] 759 789 .. 750 789 .. 0.87 5 ! 17.5 0.0 8.6e-05 0.0089 10 36 .. 802 829 .. 791 831 .. 0.81 6 ? 2.4 0.0 5.1 5.3e+02 20 38 .] 852 870 .. 838 870 .. 0.83 7 ! 29.0 0.1 2e-08 2e-06 4 38 .] 877 912 .. 874 912 .. 0.88 Alignments for each domain: == domain 1 score: 5.2 bits; conditional E-value: 0.68 EEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 6 tltGHss.vtslafspdgawlasGsdDgtvriW 37 + + H++ vt+++ p+g+ ++s s D +++ tr|C3Z9A3|C3Z9A3_BRAFL 625 EHKLHKDtVTAVRLAPSGKTIFSVSQDSLMKMY 657 55558556**************99999877765 PP == domain 2 score: 4.6 bits; conditional E-value: 1.1 EEEETTSSEEEEEETTSEEEEE CS WD40 16 lafspdgawlasGsdDgtvriW 37 +++ d++ l+ Gs+D++v+++ tr|C3Z9A3|C3Z9A3_BRAFL 678 CQVMADSKTLIIGSWDNNVYVY 699 445667788888*******998 PP == domain 3 score: 15.3 bits; conditional E-value: 0.00043 EEESS.SSEEEEEEETTSSE....EEEEETTSEEEEE CS WD40 6 tltGH.ssvtslafspdgaw....lasGsdDgtvriW 37 t +H + v+++ ++ l+s+s+D tv++W tr|C3Z9A3|C3Z9A3_BRAFL 709 TVLAHdDAVSCI------QYqdglLVSASWDSTVKLW 739 45589555****......666776889********** PP == domain 4 score: 14.7 bits; conditional E-value: 0.00066 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 H s+v + + + ++ +asG++Dgt++iW+ tr|C3Z9A3|C3Z9A3_BRAFL 759 DHdSGVVCACMDVGNTRVASGTEDGTLYIWS 789 49778999999*******************5 PP == domain 5 score: 17.5 bits; conditional E-value: 8.6e-05 S.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvri 36 H +s+++++fsp+g+ +++++ D+ +r+ tr|C3Z9A3|C3Z9A3_BRAFL 802 HtGSIHAVSFSPEGQRVLTCGADHYLRV 829 4556**************9999****98 PP == domain 6 score: 2.4 bits; conditional E-value: 5.1 TTSSEEEEEETTSEEEEEE CS WD40 20 pdgawlasGsdDgtvriWd 38 dg ++ G++ g++ +Wd tr|C3Z9A3|C3Z9A3_BRAFL 852 WDGETVIVGGESGNLLVWD 870 57778888**********9 PP == domain 7 score: 29.0 bits; conditional E-value: 2e-08 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + GH s vt++++s+dg+ +++G++D++v +W+ tr|C3Z9A3|C3Z9A3_BRAFL 877 IARVCGHtSAVTCIDVSQDGRTIVTGGEDRKVCLWK 912 55567**777*************************6 PP >> tr|C3YPF3|C3YPF3_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_167545 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 4.8 0.0 0.88 91 26 37 .. 2 13 .. 1 14 [. 0.88 2 ! 27.9 0.1 4.5e-08 4.7e-06 4 38 .] 21 56 .. 18 56 .. 0.93 3 ! 32.6 0.0 1.4e-09 1.5e-07 4 38 .] 63 98 .. 60 98 .. 0.93 4 ! 20.0 0.0 1.4e-05 0.0015 5 37 .. 109 142 .] 106 142 .] 0.91 Alignments for each domain: == domain 1 score: 4.8 bits; conditional E-value: 0.88 EEEETTSEEEEE CS WD40 26 asGsdDgtvriW 37 ++G++D t+r W tr|C3YPF3|C3YPF3_BRAFL 2 FTGCRDFTIRSW 13 69********** PP == domain 2 score: 27.9 bits; conditional E-value: 4.5e-08 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 l++l+GH + v++l +d ++las+s D+t+++Wd tr|C3YPF3|C3YPF3_BRAFL 21 LGVLRGHrGEVCALHLRKDDRLLASASCDCTIKLWD 56 789****888**************9988*******9 PP == domain 3 score: 32.6 bits; conditional E-value: 1.4e-09 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 tltGH +vt++af dg+ l+s+s+Dg ++iWd tr|C3YPF3|C3YPF3_BRAFL 63 SATLTGHeAGVTGVAFTLDGRGLVSCSRDGVLKIWD 98 679****989*************************9 PP == domain 4 score: 20.0 bits; conditional E-value: 1.4e-05 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +tl+GH + v+s+ ++ a+l+s+ dD+ + +W tr|C3YPF3|C3YPF3_BRAFL 109 GTLRGHrDIVRSVTMTKNDAYLISCADDKIIALW 142 689***6668*********************999 PP >> tr|C3ZEH8|C3ZEH8_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_210035 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.4 0.0 0.00018 0.019 9 37 .. 283 312 .. 274 313 .. 0.84 2 ! 24.5 0.4 5.4e-07 5.6e-05 5 37 .. 371 403 .. 368 404 .. 0.86 3 ! 20.6 0.1 8.7e-06 0.00091 2 38 .] 409 446 .. 408 446 .. 0.83 4 ? 4.8 0.0 0.91 95 13 38 .] 465 490 .. 450 490 .. 0.85 5 ? 3.3 0.0 2.6 2.7e+02 8 38 .] 506 540 .. 499 540 .. 0.64 6 ! 16.5 0.1 0.00017 0.018 15 38 .] 563 584 .. 546 584 .. 0.80 Alignments for each domain: == domain 1 score: 16.4 bits; conditional E-value: 0.00018 SS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriW 37 H + v+ ++fs g++la+++ D+ +r+W tr|C3ZEH8|C3ZEH8_BRAFL 283 EHtGAVWTMKFSCCGRLLATAGQDNILRVW 312 46555************************* PP == domain 2 score: 24.5 bits; conditional E-value: 5.4e-07 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +++GH +v +l++s++ l+ +s+D+tvr+W tr|C3ZEH8|C3ZEH8_BRAFL 371 CSYRGHtADVLDLSWSKNYFILS-SSMDKTVRLW 403 689***888****9999999985.667******* PP == domain 3 score: 20.6 bits; conditional E-value: 8.7e-06 EEEEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 +cl + H ++vt++af+p + ++sGs Dg++r+W+ tr|C3ZEH8|C3ZEH8_BRAFL 409 ECLCCF-QHiDFVTAIAFHPRDDRyFLSGSLDGKLRLWN 446 677778.59999*****7666666688***********8 PP == domain 4 score: 4.8 bits; conditional E-value: 0.91 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 +t+ f+ +g++ + G++Dg + ++d tr|C3ZEH8|C3ZEH8_BRAFL 465 ITAANFCENGRFAVVGTYDGRCIFFD 490 89999*******999*99**998877 PP == domain 5 score: 3.3 bits; conditional E-value: 2.6 ESSSS....EEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 8 tGHss....vtsla.fspdgawlasGsdDgtvriWd 38 +G +s +t++ + +++ l+++ D vr++d tr|C3ZEH8|C3ZEH8_BRAFL 506 RGKNSkgrkITGIEqLPGEHKILVTSN-DSRVRLYD 540 555334567777774444555567666.******98 PP == domain 6 score: 16.5 bits; conditional E-value: 0.00017 EEEEETTSSEEEEEETTSEEEEEE CS WD40 15 slafspdgawlasGsdDgtvriWd 38 s s++g+++++Gs+D+ ++iW+ tr|C3ZEH8|C3ZEH8_BRAFL 563 S--LSHNGKFIVCGSEDHYIYIWK 584 4..49******************6 PP >> tr|C3YPH4|C3YPH4_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_215317 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 11.8 0.0 0.0054 0.57 5 34 .. 26 58 .. 22 59 .. 0.78 2 ! 22.3 0.0 2.5e-06 0.00026 14 38 .] 80 104 .. 62 104 .. 0.90 3 ! 23.2 0.2 1.3e-06 0.00014 5 36 .. 112 144 .. 108 146 .. 0.86 4 ? 5.6 0.0 0.49 51 13 38 .] 164 190 .. 147 190 .. 0.81 5 ? 10.4 0.0 0.015 1.6 2 38 .] 195 234 .. 194 234 .. 0.83 6 ? 4.1 0.0 1.4 1.5e+02 4 38 .] 241 275 .. 238 275 .. 0.86 7 ? 1.9 0.0 7.3 7.6e+02 3 18 .. 282 298 .. 280 301 .. 0.82 Alignments for each domain: == domain 1 score: 11.8 bits; conditional E-value: 0.0054 EEEESS.SSEEEEEEETTSSEEEEEET..TSEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsd..Dgtv 34 ++ H ++++s ++s++++++a++s D+ v tr|C3YPH4|C3YPH4_BRAFL 26 SEFNPHqQDISSACWSHNNQFMATASTagDKVV 58 668889899*************98753237765 PP == domain 2 score: 22.3 bits; conditional E-value: 2.5e-06 EEEEEETTSSEEEEEETTSEEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriWd 38 t++af++ +++l++G++Dgt++i+d tr|C3YPH4|C3YPH4_BRAFL 80 TCVAFHSTSRYLLTGGKDGTIHIFD 104 8**********************98 PP == domain 3 score: 23.2 bits; conditional E-value: 1.3e-06 EEEESSSS.EEEEEEETTSSEEEEEETTSEEEE CS WD40 5 rtltGHss.vtslafspdgawlasGsdDgtvri 36 + ++GHs+ +t++ f+ + +++asGs +g++ + tr|C3YPH4|C3YPH4_BRAFL 112 KQYKGHSDaITCVTFNWNDTYIASGSVNGNIVL 144 679***555********************9976 PP == domain 4 score: 5.6 bits; conditional E-value: 0.49 EEEEEEETTSSEEEEE..ETTSEEEEEE CS WD40 13 vtslafspdgawlasG..sdDgtvriWd 38 ++++++s ++ l+ G sd gtv +Wd tr|C3YPH4|C3YPH4_BRAFL 164 IRDIQYSYFKRSLL-GsvSDSGTVVLWD 190 77887888888888.53479*******9 PP == domain 5 score: 10.4 bits; conditional E-value: 0.015 EEEEEEE.SS.SSEEEEEEETTSSEEEEE.ETTSEEEEEE CS WD40 2 qclrtlt.GH.ssvtslafspdgawlasG.sdDgtvriWd 38 ++l++++ +H + t+l fsp +++l++ + D+++ +d tr|C3YPH4|C3YPH4_BRAFL 195 RPLHSFKdAHhAPATALTFSPVNDMLMATvGLDKKICCYD 234 789**988887889***********9743377**999887 PP == domain 6 score: 4.1 bits; conditional E-value: 1.4 EEEEESSSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGHssvtslafspdgawlasGsdDgtvriWd 38 +rt t+ s+ t+++ dga l+ Gs g+v+++d tr|C3YPH4|C3YPH4_BRAFL 241 VRTMTAESPLTAVDLMYDGATLVVGSTRGKVYLYD 275 67777778899***9**********9999999988 PP == domain 7 score: 1.9 bits; conditional E-value: 7.3 EEEEEESS.SSEEEEEE CS WD40 3 clrtltGH.ssvtslaf 18 ++++ +H +sv +l+f tr|C3YPH4|C3YPH4_BRAFL 282 PQKVTQAHkTSVKCLKF 298 678889**888****65 PP >> tr|C3Z6S5|C3Z6S5_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_113847 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.4 0.1 0.031 3.2 21 38 .] 155 173 .. 140 173 .. 0.85 2 ? 5.9 0.1 0.4 42 2 38 .] 198 236 .. 197 236 .. 0.69 3 ! 34.9 0.1 2.6e-10 2.8e-08 4 38 .] 246 282 .. 244 282 .. 0.92 4 ! 25.8 0.1 2e-07 2.1e-05 4 38 .] 292 327 .. 289 327 .. 0.91 5 ! 17.2 0.2 0.0001 0.011 4 38 .] 337 373 .. 334 373 .. 0.82 Alignments for each domain: == domain 1 score: 9.4 bits; conditional E-value: 0.031 TSSEEEEE.ETTSEEEEEE CS WD40 21 dgawlasG.sdDgtvriWd 38 g+ la++ sd+g+v+iWd tr|C3Z6S5|C3Z6S5_BRAFL 155 QGTHLAACwSDKGSVHIWD 173 57789999**********9 PP == domain 2 score: 5.9 bits; conditional E-value: 0.4 EEEEEEESS.SS...E...EEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ss...v...tslafspdgawlasGsdDgtvriWd 38 q+++++ GH + v t + +g++ a+G+ + +++W+ tr|C3Z6S5|C3Z6S5_BRAFL 198 QPVYSFPGHqTEgfaVdwsTTV----NGRL-ATGDCRKDIHVWN 236 8999*****7335565323333....6666.8997699999998 PP == domain 3 score: 34.9 bits; conditional E-value: 2.6e-10 EEEEESS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawl.asGsdDgtvriWd 38 +r +tGH +sv ++++sp+ a + as+s D+t+riWd tr|C3Z6S5|C3Z6S5_BRAFL 246 QRPFTGHtQSVEDIQWSPNEATVfASCSVDKTIRIWD 282 688****999************846899********9 PP == domain 4 score: 25.8 bits; conditional E-value: 2e-07 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + t t+H +v+ ++++++ ++++sG+dDg +++Wd tr|C3Z6S5|C3Z6S5_BRAFL 292 MLTTTAHeRDVNVISWNRHEPFIVSGGDDGVIKVWD 327 567789*888*************************9 PP == domain 5 score: 17.2 bits; conditional E-value: 0.0001 EEEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 + +++ H ++ts+ ++p + ++ +++ D + +Wd tr|C3Z6S5|C3Z6S5_BRAFL 337 VAVFKHHtAPITSVEWHPTDSTVFaASGADDQLTMWD 373 6789999888************8523456*******8 PP >> tr|C3YT95|C3YT95_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_70176 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 19.3 0.0 2.3e-05 0.0024 10 38 .] 1076 1106 .. 1069 1106 .. 0.86 2 ! 20.6 0.3 8.9e-06 0.00093 6 38 .] 1174 1208 .. 1169 1208 .. 0.87 3 ! 19.7 0.1 1.7e-05 0.0018 11 38 .] 1230 1257 .. 1217 1257 .. 0.87 4 ! 18.1 0.1 5.7e-05 0.006 8 38 .] 1270 1303 .. 1261 1303 .. 0.85 5 ? 2.5 0.0 4.7 4.9e+02 14 29 .. 1324 1339 .. 1315 1350 .. 0.87 Alignments for each domain: == domain 1 score: 19.3 bits; conditional E-value: 2.3e-05 S..SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 H..ssvtslafspdgawlasGsdDgtvriWd 38 H + v++la +p+g+ l++G++D +r+Wd tr|C3YT95|C3YT95_BRAFL 1076 HgnKTVSALALDPSGSRLITGGYDYDIRFWD 1106 65366*************************9 PP == domain 2 score: 20.6 bits; conditional E-value: 8.9e-06 EEESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 + +GH s +s +++p + l+ ++sdD tvriWd tr|C3YT95|C3YT95_BRAFL 1174 KTKGHvASLNSACWHPRTKGLFlTCSDDSTVRIWD 1208 568**9999***99999999845***********9 PP == domain 3 score: 19.7 bits; conditional E-value: 1.7e-05 SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriWd 38 ++vts+ fs+dg++++ G++Dg++ iWd tr|C3YT95|C3YT95_BRAFL 1230 TGVTSCGFSRDGKLIVGGCEDGSIQIWD 1257 359*************889********9 PP == domain 4 score: 18.1 bits; conditional E-value: 5.7e-05 ESS.SS..EEEEEEETTSSEEEE.EETTSEEEEEE CS WD40 8 tGH.ss..vtslafspdgawlas.GsdDgtvriWd 38 t+H ++ +t+++fs d++ l+s G+ D t ++Wd tr|C3YT95|C3YT95_BRAFL 1270 TAHqNGagITCVSFSYDNRALLSrGG-DDTMKLWD 1303 49986688************986699.*******9 PP == domain 5 score: 2.5 bits; conditional E-value: 4.7 EEEEEETTSSEEEEEE CS WD40 14 tslafspdgawlasGs 29 t++ fspd +++++G+ tr|C3YT95|C3YT95_BRAFL 1324 TDCTFSPDDKMVVTGT 1339 7899**********96 PP >> tr|C3YRV0|C3YRV0_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_279094 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.2 0.0 2.8 3e+02 10 38 .] 50 78 .. 44 78 .. 0.83 2 ! 14.7 0.0 0.00065 0.068 12 38 .] 177 203 .. 169 203 .. 0.87 3 ? 9.7 0.4 0.026 2.7 9 38 .] 218 248 .. 212 248 .. 0.87 4 ! 25.1 0.0 3.4e-07 3.6e-05 5 38 .] 256 292 .. 252 292 .. 0.84 5 ! 13.5 0.2 0.0016 0.17 8 38 .] 359 389 .. 350 389 .. 0.83 6 ! 15.2 0.1 0.00045 0.047 4 37 .. 508 542 .. 506 543 .. 0.89 Alignments for each domain: == domain 1 score: 3.2 bits; conditional E-value: 2.8 S.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvriWd 38 H ++ ++ pd++++a + Dg v +W+ tr|C3YRV0|C3YRV0_BRAFL 50 HrEPIVKVSHTPDNTFMAL-GQDGMVTFWS 78 777788999*******864.66****9995 PP == domain 2 score: 14.7 bits; conditional E-value: 0.00065 SEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriWd 38 +v ++fs++++++++G++D+ vr W+ tr|C3YRV0|C3YRV0_BRAFL 177 GVKTFDFSKEKNLIVTGGMDRIVRTWN 203 588999********************8 PP == domain 3 score: 9.7 bits; conditional E-value: 0.026 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 H sv +++++++ + ++s+sd v++Wd tr|C3YRV0|C3YRV0_BRAFL 218 SHkESVQCCKYNSSFKQVISCSDASVVKVWD 248 59777****9888888899***********9 PP == domain 4 score: 25.1 bits; conditional E-value: 3.4e-07 EEEE.SS..SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtlt.GH..ssvtslafspdgawlasGsdDgtvriWd 38 +++ +H ++vt++ f++ + l++G++Dg +riW+ tr|C3YRV0|C3YRV0_BRAFL 256 FEFSgAHgdKPVTCMTFDSTERRLITGGRDGVLRIWN 292 55664676666*************************8 PP == domain 5 score: 13.5 bits; conditional E-value: 0.0016 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 GH +++ s+a++p + + ++ +Dg+v +W+ tr|C3YRV0|C3YRV0_BRAFL 359 HGHkDDILSVATCPPNLLA-TSAYDGKVIVWN 389 399777****999998885.5656*******8 PP == domain 6 score: 15.2 bits; conditional E-value: 0.00045 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +r +++H +s+t+++ +++ ++++ D+tvr+W tr|C3YRV0|C3YRV0_BRAFL 508 IRDWRAHtQSITGMDLIEEHNIVITCALDCTVRVW 542 67789**999****9888889999**99******* PP >> tr|C3YZV9|C3YZV9_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_276592 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.3 0.3 0.00042 0.044 2 38 .] 91 126 .. 90 126 .. 0.84 2 ! 12.0 0.0 0.0047 0.49 9 37 .. 269 298 .. 261 299 .. 0.87 3 ? 8.4 0.0 0.062 6.5 6 38 .] 474 507 .. 469 507 .. 0.88 4 ? 2.6 0.0 4.5 4.7e+02 3 36 .. 513 546 .. 511 548 .. 0.77 5 ! 36.0 0.1 1.2e-10 1.2e-08 3 38 .] 554 590 .. 552 590 .. 0.94 6 ? 4.4 0.1 1.2 1.3e+02 14 31 .. 607 624 .. 599 631 .. 0.88 Alignments for each domain: == domain 1 score: 15.3 bits; conditional E-value: 0.00042 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 q +t++GH ++v +l p ++ l+s + D v+iWd tr|C3YZV9|C3YZV9_BRAFL 91 QVKHTYEGHqKDV-HL-LLPFSNHLISVDVDSVVKIWD 126 6789******99*.66.4777777788999*******9 PP == domain 2 score: 12.0 bits; conditional E-value: 0.0047 SS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriW 37 +H + vt+l+f p+ ++++++ D++++ W tr|C3YZV9|C3YZV9_BRAFL 269 AHgTAVTGLKFLPSEPMMITSAADNSIKEW 298 89777************999988****977 PP == domain 3 score: 8.4 bits; conditional E-value: 0.062 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + ++H +sv+++a++ ++ ++G D+ +++W+ tr|C3YZV9|C3YZV9_BRAFL 474 SPKAHnTSVRGVAVDGLNQVTVTGAADCMLKFWK 507 5689*888****99999999889*99*******6 PP == domain 4 score: 2.6 bits; conditional E-value: 4.5 EEEEEESSSSEEEEEEETTSSEEEEEETTSEEEE CS WD40 3 clrtltGHssvtslafspdgawlasGsdDgtvri 36 +l+tl+ s+v+ + ++++++la ++dD tv + tr|C3YZV9|C3YZV9_BRAFL 513 LLHTLELDSPVSQMVLHRESNMLAVACDDFTVVV 546 566665445688888999*****98888***987 PP == domain 5 score: 36.0 bits; conditional E-value: 1.2e-10 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +r ++GH + +t++ fspd +wl+++s+D+tvr Wd tr|C3YZV9|C3YZV9_BRAFL 554 VVRRFSGHqNRITDMTFSPDARWLVTSSMDCTVRTWD 590 6789****999*************************9 PP == domain 6 score: 4.4 bits; conditional E-value: 1.2 EEEEEETTSSEEEEEETT CS WD40 14 tslafspdgawlasGsdD 31 tsl sp g++la+++ D tr|C3YZV9|C3YZV9_BRAFL 607 TSLTMSPTGDFLATAHVD 624 89999**********976 PP >> tr|C3ZML4|C3ZML4_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_283492 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 12.5 0.1 0.0033 0.35 7 38 .] 282 315 .. 277 315 .. 0.82 2 ! 13.1 0.0 0.0021 0.22 2 38 .] 321 358 .. 320 358 .. 0.90 3 ? 7.3 0.1 0.14 15 9 37 .. 414 443 .. 408 443 .. 0.90 4 ! 21.9 0.0 3.5e-06 0.00036 2 38 .] 449 488 .. 448 488 .. 0.85 5 ? 10.0 0.1 0.02 2.1 10 38 .] 550 578 .. 544 578 .. 0.75 6 ? 5.1 0.0 0.72 75 21 38 .] 650 666 .. 628 666 .. 0.86 7 ? 9.6 0.0 0.028 2.9 16 38 .] 685 709 .. 671 709 .. 0.72 Alignments for each domain: == domain 1 score: 12.5 bits; conditional E-value: 0.0033 EESS..SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH..ssvtslafspdgawlasGsdDgtvriWd 38 ++ +++++++++ +++++G+ +++v +W+ tr|C3ZML4|C3ZML4_BRAFL 282 ISFNvsQGIHCFDYHEQMNLIVTGGVNHHVSLWN 315 55554245*************************8 PP == domain 2 score: 13.1 bits; conditional E-value: 0.0021 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++++ l+GH sv ++f+ + ++s s+D+ +r+Wd tr|C3ZML4|C3ZML4_BRAFL 321 KPIGLLRGHmASVVNVQFNTTKGQILSFSKDKVLRVWD 358 577889****9999**999999999988*********9 PP == domain 3 score: 7.3 bits; conditional E-value: 0.14 SS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriW 37 H +++ts+ +++ + ++sG+ tv +W tr|C3ZML4|C3ZML4_BRAFL 414 SHdKPITSVLYNRTYNQVISGCQGSTVTVW 443 59999*****************99999999 PP == domain 4 score: 21.9 bits; conditional E-value: 3.5e-06 EEEEEEE.SS.SS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtlt.GH.ss.vtslafspdgawlasGsdDgtvriWd 38 q+++ ++ H s +t +a +p+ + l ++s Dgtv+iWd tr|C3ZML4|C3ZML4_BRAFL 449 QKVKQFEnCHgSAeITTMALDPSDTRLYTASTDGTVKIWD 488 66667755895448****************99*******9 PP == domain 5 score: 10.0 bits; conditional E-value: 0.02 S.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvriWd 38 H +++ + afs+ +++ a+Gs+Dg + +W+ tr|C3ZML4|C3ZML4_BRAFL 550 HqDDILCGAFSDPNTL-ATGSYDGEIIMWN 578 6555755556655555.89**********8 PP == domain 6 score: 5.1 bits; conditional E-value: 0.72 TSSEEEEEETTSEEEEEE CS WD40 21 dgawlasGsdDgtvriWd 38 g+++++G+ +g vr+W+ tr|C3ZML4|C3ZML4_BRAFL 650 GGNLVSCGG-NGFVRFWS 666 578888889.*******5 PP == domain 7 score: 9.6 bits; conditional E-value: 0.028 EE..EETTSSEEEEEETTSEEEEEE CS WD40 16 la..fspdgawlasGsdDgtvriWd 38 + +++ +++la+G+ Dg+ ++W+ tr|C3ZML4|C3ZML4_BRAFL 685 IImaTDDLNRYLATGDVDGNAKVWN 709 43336777899*************8 PP >> tr|C3XVR3|C3XVR3_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_83129 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 7.6 0.0 0.11 12 25 37 .. 52 64 .. 42 65 .. 0.88 2 ! 31.2 0.0 4e-09 4.2e-07 5 38 .] 74 108 .. 70 108 .. 0.89 3 ! 38.2 0.3 2.4e-11 2.5e-09 1 38 [] 112 150 .. 112 150 .. 0.95 Alignments for each domain: == domain 1 score: 7.6 bits; conditional E-value: 0.11 EEEEETTSEEEEE CS WD40 25 lasGsdDgtvriW 37 l+sGsdD t+ +W tr|C3XVR3|C3XVR3_BRAFL 52 LVSGSDDFTLFLW 64 789********** PP == domain 2 score: 31.2 bits; conditional E-value: 4e-09 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 tGH ++ ++fspd +++as+s D++v++Wd tr|C3XVR3|C3XVR3_BRAFL 74 ARMTGHmALINEVCFSPDARLIASASFDKSVKLWD 108 5579**777****************99*******9 PP == domain 3 score: 38.2 bits; conditional E-value: 2.4e-11 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+ l++l+GH + v+ +a+s d+++l+sGs D t+++Wd tr|C3XVR3|C3XVR3_BRAFL 112 GKYLTSLRGHvNAVYQVAWSADSRLLVSGSSDSTLKVWD 150 57899************************99*******9 PP >> tr|C3XVS4|C3XVS4_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_123353 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 7.6 0.0 0.11 12 25 37 .. 52 64 .. 42 65 .. 0.88 2 ! 31.2 0.0 4e-09 4.2e-07 5 38 .] 74 108 .. 70 108 .. 0.89 3 ! 38.2 0.3 2.4e-11 2.5e-09 1 38 [] 112 150 .. 112 150 .. 0.95 Alignments for each domain: == domain 1 score: 7.6 bits; conditional E-value: 0.11 EEEEETTSEEEEE CS WD40 25 lasGsdDgtvriW 37 l+sGsdD t+ +W tr|C3XVS4|C3XVS4_BRAFL 52 LVSGSDDFTLFLW 64 789********** PP == domain 2 score: 31.2 bits; conditional E-value: 4e-09 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 tGH ++ ++fspd +++as+s D++v++Wd tr|C3XVS4|C3XVS4_BRAFL 74 ARMTGHmALINEVCFSPDARLIASASFDKSVKLWD 108 5579**777****************99*******9 PP == domain 3 score: 38.2 bits; conditional E-value: 2.4e-11 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+ l++l+GH + v+ +a+s d+++l+sGs D t+++Wd tr|C3XVS4|C3XVS4_BRAFL 112 GKYLTSLRGHvNAVYQVAWSADSRLLVSGSSDSTLKVWD 150 57899************************99*******9 PP >> tr|C3XUL0|C3XUL0_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_246700 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 13.1 0.3 0.0021 0.21 3 38 .] 41 79 .. 39 79 .. 0.79 2 ? 8.1 0.0 0.08 8.3 7 38 .] 90 124 .. 84 124 .. 0.81 3 ? 10.1 0.0 0.019 1.9 9 38 .] 348 378 .. 289 378 .. 0.94 4 ! 16.6 0.0 0.00016 0.017 13 36 .. 396 419 .. 387 421 .. 0.89 5 ! 15.1 0.1 0.00051 0.053 12 37 .. 439 464 .. 432 465 .. 0.90 6 ! 13.1 0.0 0.0021 0.22 7 38 .] 630 663 .. 625 663 .. 0.87 Alignments for each domain: == domain 1 score: 13.1 bits; conditional E-value: 0.0021 EEEEEESSSS.EEEEEEETTSSEEEEE..ETTSEEEEEE CS WD40 3 clrtltGHss.vtslafspdgawlasG..sdDgtvriWd 38 +++ l GH++ ++s ++s d +w+a++ + + v +Wd tr|C3XUL0|C3XUL0_BRAFL 41 TQKLLQGHCNvISSTCVSEDRRWIATAdsGQNSMVIVWD 79 567789**554777777********986468*******9 PP == domain 2 score: 8.1 bits; conditional E-value: 0.08 EESS.SSEEEEEEETTSSEEE..EEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawla..sGsdDgtvriWd 38 ++ H ++vt +a pd ++l+ s+ + +tv iWd tr|C3XUL0|C3XUL0_BRAFL 90 FDPHvGGVTTMAMTPDAKFLVtvSAAETQTVAIWD 124 6779999************98334558*******9 PP == domain 3 score: 10.1 bits; conditional E-value: 0.019 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 H v++++++p + l+ Gs+ g ++iWd tr|C3XUL0|C3XUL0_BRAFL 348 EHdAAVHAICTHPTEPRLCMGSYSGLLKIWD 378 58555*************88**********9 PP == domain 4 score: 16.6 bits; conditional E-value: 0.00016 EEEEEEETTSSEEEEEETTSEEEE CS WD40 13 vtslafspdgawlasGsdDgtvri 36 +++laf+p g la+G +Dg+vr+ tr|C3XUL0|C3XUL0_BRAFL 396 IRCLAFDPTGLILAAGFMDGSVRV 419 99**************99*****8 PP == domain 5 score: 15.1 bits; conditional E-value: 0.00051 SEEEEEEETTSSEEEEEETTSEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriW 37 svt+++fs+d+++la+++ D tv ++ tr|C3XUL0|C3XUL0_BRAFL 439 SVTHCCFSHDSNFLATADADFTVSVF 464 69***************99****986 PP == domain 6 score: 13.1 bits; conditional E-value: 0.0021 EESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 l +H ++v la s dg++++ +G++D+t ++W+ tr|C3XUL0|C3XUL0_BRAFL 630 LIAHpTGVANLACSYDGKYVFtAGGEDCTAHMWS 663 67898889999********973679********5 PP >> tr|C3ZF60|C3ZF60_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_277111 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 14.9 0.0 0.00058 0.06 12 38 .] 76 102 .. 65 102 .. 0.85 2 ! 11.7 0.0 0.0058 0.6 9 37 .. 176 207 .. 166 208 .. 0.76 3 ? 3.4 0.0 2.4 2.5e+02 9 34 .. 227 254 .. 216 257 .. 0.73 4 ! 18.3 0.0 4.9e-05 0.0051 2 38 .] 263 301 .. 262 301 .. 0.88 5 ? 9.7 0.0 0.025 2.7 18 38 .] 326 346 .. 308 346 .. 0.84 6 ! 14.1 1.6 0.00098 0.1 2 31 .. 364 394 .. 363 431 .. 0.64 Alignments for each domain: == domain 1 score: 14.9 bits; conditional E-value: 0.00058 SEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriWd 38 + ++++spdg+ +++ sdD+t+r+++ tr|C3ZF60|C3ZF60_BRAFL 76 FLKGCKWSPDGSCILTNSDDNTLRLFN 102 467899*********99********97 PP == domain 2 score: 11.7 bits; conditional E-value: 0.0058 SS.SS.E..EEEEEETTSSEEEEEETTSEEEEE CS WD40 9 GH.ss.v..tslafspdgawlasGsdDgtvriW 37 H + v +sl f+p+g+ l +G ++tvri+ tr|C3ZF60|C3ZF60_BRAFL 176 DHmDEvVaaHSLTFNPEGNKLYCGF-NKTVRIF 207 4655544668999*********999.*****97 PP == domain 3 score: 3.4 bits; conditional E-value: 2.4 SSSS.EEEEEEETTSSEE.EEEETTSEE CS WD40 9 GHss.vtslafspdgawl.asGsdDgtv 34 G+++ ++++++sp+++ + a+Gs+ ++v tr|C3ZF60|C3ZF60_BRAFL 227 GQGGiISCIDVSPENPDIyACGSYSKSV 254 553447*********9993456766665 PP == domain 4 score: 18.3 bits; conditional E-value: 4.9e-05 EEEEEEESS.SSEEEEEEETTSSEEEEEE.TTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGs.dDgtvriWd 38 ++l l G+ ++vt + fspdg+ l sG+ +D+ + Wd tr|C3ZF60|C3ZF60_BRAFL 263 KLLFLLQGQqGGVTQVMFSPDGNRLYSGGrKDPEILCWD 301 667778999788****************856*******9 PP == domain 5 score: 9.7 bits; conditional E-value: 0.025 EETTSSEEEEEETTSEEEEEE CS WD40 18 fspdgawlasGsdDgtvriWd 38 s+ g++l+sG+ g + +W+ tr|C3ZF60|C3ZF60_BRAFL 326 ISSTGQYLVSGGQSGVISVWN 346 6899****************8 PP == domain 6 score: 14.1 bits; conditional E-value: 0.00098 EEEEEEESSSS.EEEEEEETTSSEEEEEETT CS WD40 2 qclrtltGHss.vtslafspdgawlasGsdD 31 q++ t++GH++ v++++ +p ++la++s tr|C3ZF60|C3ZF60_BRAFL 364 QPVLTWRGHNDaVNGVSLHPFATLLATASGQ 394 78999****666*************985522 PP >> tr|C3YVL3|C3YVL3_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_287194 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.4 0.1 0.00038 0.04 8 38 .] 10 41 .. 3 41 .. 0.87 2 ! 20.6 0.0 9e-06 0.00094 6 38 .] 52 87 .. 47 87 .. 0.86 3 ! 12.6 0.2 0.0031 0.33 3 36 .. 95 131 .. 93 133 .. 0.77 4 ? 7.6 0.2 0.12 12 23 37 .. 181 194 .. 140 195 .. 0.72 5 ! 17.7 0.1 7.4e-05 0.0077 3 38 .] 203 243 .. 201 243 .. 0.82 6 ! 14.0 1.0 0.0011 0.11 13 38 .] 262 287 .. 251 287 .. 0.85 Alignments for each domain: == domain 1 score: 15.4 bits; conditional E-value: 0.00038 ESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGHss.vtslafspdgawlasGsdDgtvriWd 38 tGH + +++ + + +g la++s D+tv+i+d tr|C3YVL3|C3YVL3_BRAFL 10 TGHEDmIHDAQMDYYGVRLATCSSDKTVKIFD 41 69*667****9999********88******98 PP == domain 2 score: 20.6 bits; conditional E-value: 9e-06 EEESS.SSEEEEE..EETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtsla..fspdgawlasGsdDgtvriWd 38 +l+GH ++v+ la + +g+ las+s+D++v iW+ tr|C3YVL3|C3YVL3_BRAFL 52 ELRGHeGPVWQLAwaHPMYGNILASCSYDRKVIIWK 87 699**999****7767777777*************6 PP == domain 3 score: 12.6 bits; conditional E-value: 0.0031 EEEEEESS.SSEEEEE..EETTSSEEEEEETTSEEEE CS WD40 3 clrtltGH.ssvtsla..fspdgawlasGsdDgtvri 36 l+++ H ssv+s++ + g +l++Gs Dg v i tr|C3YVL3|C3YVL3_BRAFL 95 RLYEYANHdSSVNSVCwaPHEFGLMLVCGSSDGAVSI 131 5778889*888****855555555589**88**9987 PP == domain 4 score: 7.6 bits; conditional E-value: 0.12 SEEEEEETTSEEEEE CS WD40 23 awlasGsdDgtvriW 37 + +++G+ D+ v+iW tr|C3YVL3|C3YVL3_BRAFL 181 R-FVTGGCDNLVKIW 194 3.457877******* PP == domain 5 score: 17.7 bits; conditional E-value: 7.4e-05 EEEEEESS.SSEEEEEEETTSSE..........EEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw..........lasGsdDgtvriWd 38 ++l++H ++v+++ aw +as+s Dg v iW+ tr|C3YVL3|C3YVL3_BRAFL 203 EEQKLEAHsDWVRDV------AWapsiglptqtIASCSQDGRVIIWK 243 567899**666****......6666666699999************6 PP == domain 6 score: 14.0 bits; conditional E-value: 0.0011 EEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 13 vtslafspdgawla.sGsdDgtvriWd 38 v+++++s g+ la sG+ D++v +W+ tr|C3YVL3|C3YVL3_BRAFL 262 VWHVSWSITGNILAvSGG-DNKVSLWK 287 7***********985888.*******6 PP >> tr|C3ZLM0|C3ZLM0_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_86152 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 2.1 0.0 6.3 6.6e+02 12 38 .] 48 78 .. 39 78 .. 0.70 2 ? 10.5 0.0 0.014 1.5 4 38 .] 132 167 .. 129 167 .. 0.83 3 ? 10.8 0.0 0.012 1.2 7 38 .] 181 213 .. 174 213 .. 0.87 4 ! 15.7 0.2 0.00033 0.034 5 38 .] 269 303 .. 261 303 .. 0.76 5 ! 13.4 0.0 0.0017 0.18 15 37 .. 363 385 .. 306 386 .. 0.90 6 ? 10.7 0.2 0.012 1.2 7 25 .. 400 419 .. 392 463 .. 0.87 7 ? 5.4 0.0 0.58 61 12 37 .. 481 508 .. 467 508 .. 0.74 Alignments for each domain: == domain 1 score: 2.1 bits; conditional E-value: 6.3 SEEEEE..EETTSSEEEEE..ETTSEEEEEE CS WD40 12 svtsla..fspdgawlasG..sdDgtvriWd 38 ++++l + +g++l++ +d++ + +Wd tr|C3ZLM0|C3ZLM0_BRAFL 48 GICCLGfsKQNHGNYLMAVdeGDNHVLSVWD 78 5666654456677779875555699999998 PP == domain 2 score: 10.5 bits; conditional E-value: 0.014 EEEEESS..SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH..ssvtslafspdgawlasGsdDgtvriWd 38 ++++G +++t++ fs g+ + +G+ g++ +W+ tr|C3ZLM0|C3ZLM0_BRAFL 132 SGVFEGEkpKFITGMEFSATGDVI-TGDSSGNILVWS 167 56788885555************8.7*66*******5 PP == domain 3 score: 10.8 bits; conditional E-value: 0.012 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++H +sv l+ +dg++l+ G+ D+++ Wd tr|C3ZLM0|C3ZLM0_BRAFL 181 MRAHeKSVFTLRMLSDGTLLSGGGVDRKLVAWD 213 689****************976789****9998 PP == domain 4 score: 15.7 bits; conditional E-value: 0.00033 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++ GH ++la++p+ + ++++++D++v +W+ tr|C3ZLM0|C3ZLM0_BRAFL 269 TVIQGHsEELWALAVHPHEHAFLTAGYDNHVCLWS 303 4567**555*****7777777777777*******5 PP == domain 5 score: 13.4 bits; conditional E-value: 0.0017 EEEEETTSSEEEEEETTSEEEEE CS WD40 15 slafspdgawlasGsdDgtvriW 37 +++fspdg++la Gs D+t++++ tr|C3ZLM0|C3ZLM0_BRAFL 363 AIRFSPDGSLLAMGSHDNTIYLF 385 577********99*99****987 PP == domain 6 score: 10.7 bits; conditional E-value: 0.012 EESS.SSEEEEEEETTSSEE CS WD40 7 ltGH.ssvtslafspdgawl 25 l+GH ++ t++++s+dg++l tr|C3ZLM0|C3ZLM0_BRAFL 400 LKGHkNFLTHIDWSSDGRYL 419 78**888***********96 PP == domain 7 score: 5.4 bits; conditional E-value: 0.58 S.EEEEEEETTSSEEE.EEETTSEEEEE CS WD40 12 s.vtslafspdgawla.sGsdDgtvriW 37 s vt ++f d +l+ +G++D ++ W tr|C3ZLM0|C3ZLM0_BRAFL 481 SnVTNVKFLYDDGYLLtTGGMDAALMQW 508 159999977777776539999*999999 PP >> tr|C3YID2|C3YID2_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_120363 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 33.2 0.0 9.2e-10 9.6e-08 2 38 .] 22 60 .. 21 60 .. 0.90 2 ! 22.9 0.1 1.7e-06 0.00017 4 38 .] 68 104 .. 66 104 .. 0.85 3 ! 20.7 0.1 8.3e-06 0.00087 4 37 .. 125 160 .. 122 161 .. 0.85 Alignments for each domain: == domain 1 score: 33.2 bits; conditional E-value: 9.2e-10 EEEEEEESS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawl.asGsdDgtvriWd 38 ++ +t ++H v++l+f+p++ ++ a+Gs D+tv +Wd tr|C3YID2|C3YID2_BRAFL 22 KPSHTVDAHtAEVNCLSFNPYSEFIlATGSADKTVALWD 60 6899*****777************6379**********9 PP == domain 2 score: 22.9 bits; conditional E-value: 1.7e-06 EEEEESSSS.EEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 4 lrtltGHss.vtslafspdgawla.sGsdDgtvriWd 38 l++++ H++ + +++sp++ ++ s++ D+ + +Wd tr|C3YID2|C3YID2_BRAFL 68 LHSFESHKDeIFQVQWSPHNETILaSSGTDRRLNVWD 104 89*****556************7525567*******9 PP == domain 3 score: 20.7 bits; conditional E-value: 8.3e-06 EEEEESS.SSEEEEEEETTSSEEEEE.ETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasG.sdDgtvriW 37 l + GH +++++++p+ +w++++ s+D+ +W tr|C3YID2|C3YID2_BRAFL 125 LFIHGGHtAKISDFSWNPNEPWVICSvSEDNIMQVW 160 56668**666************9977799****999 PP >> tr|C3Z7P8|C3Z7P8_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_69221 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 28.2 1.1 3.5e-08 3.6e-06 2 38 .] 296 331 .. 295 331 .. 0.86 2 ? 9.6 0.0 0.027 2.9 3 38 .] 337 370 .. 335 370 .. 0.88 3 ! 11.3 0.0 0.0081 0.84 10 38 .] 385 409 .. 374 409 .. 0.71 4 ? 7.7 0.9 0.1 11 2 38 .] 414 449 .. 413 449 .. 0.80 5 ! 20.3 0.0 1.1e-05 0.0011 3 38 .] 455 493 .. 454 493 .. 0.91 6 ? 6.5 0.0 0.26 27 3 36 .. 499 531 .. 497 531 .. 0.85 Alignments for each domain: == domain 1 score: 28.2 bits; conditional E-value: 3.5e-08 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +c +t+ GH ++v+ l + +g++l+sGs D+t+++Wd tr|C3Z7P8|C3Z7P8_BRAFL 296 RCKGTYVGHqGPVWTL--CVHGDLLFSGSSDKTIKVWD 331 7999*****888*766..44999999**99*******9 PP == domain 2 score: 9.6 bits; conditional E-value: 0.027 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++t+ +H ++v+ l ++++l+sGs + +++Wd tr|C3Z7P8|C3Z7P8_BRAFL 337 HMKTIQAHdNPVCTL--VASNNLLFSGS-LKAIKVWD 370 678999**999*999..888888899**.*******9 PP == domain 3 score: 11.3 bits; conditional E-value: 0.0081 SSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 HssvtslafspdgawlasGsdDgtvriWd 38 H +v++l + ++l sGs +t++iWd tr|C3Z7P8|C3Z7P8_BRAFL 385 H-WVRAL--VASTHYLYSGS-YQTIKIWD 409 4.47766..555677889**.*******9 PP == domain 4 score: 7.7 bits; conditional E-value: 0.1 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +c+++l + +sv+s+a ++ +++G++ + +++Wd tr|C3Z7P8|C3Z7P8_BRAFL 414 ECVHVLQTSgGSVYSIAITNHH--ILCGTYENCIHVWD 449 799***9887779999554443..558*99*******9 PP == domain 5 score: 20.3 bits; conditional E-value: 1.1e-05 EEEEEESS.SSEEEEE..EETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtsla..fspdgawlasGsdDgtvriWd 38 +++tltGH + v++la + ++g+ ++s+s+D+++r+W+ tr|C3Z7P8|C3Z7P8_BRAFL 455 QIQTLTGHvGTVYALAvvNTHEGTKVFSASYDRSLRVWS 493 5799****999*9999999999999999**********5 PP == domain 6 score: 6.5 bits; conditional E-value: 0.26 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvri 36 c++tl H +sv +la+s+ + sG D tv++ tr|C3Z7P8|C3Z7P8_BRAFL 499 CTQTLLRHqGSVACLAVSRGRVF--SGAVDSTVKF 531 77887779888****99988888..8*99****95 PP >> tr|C3XZ79|C3XZ79_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_117882 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 18.1 0.1 5.7e-05 0.0059 5 36 .. 112 144 .. 108 144 .. 0.88 2 ! 15.7 0.0 0.00032 0.034 2 29 .. 149 177 .. 148 197 .. 0.82 3 ? 3.0 0.0 3.3 3.4e+02 7 33 .. 192 223 .. 187 230 .. 0.71 4 ! 14.0 0.1 0.0011 0.11 7 37 .. 289 315 .. 279 316 .. 0.72 5 ! 24.6 0.0 4.7e-07 4.9e-05 3 37 .. 322 358 .. 320 358 .. 0.85 Alignments for each domain: == domain 1 score: 18.1 bits; conditional E-value: 5.7e-05 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvri 36 ++l+ H + v+ ++fs dg+ la+Gs+D t+ i tr|C3XZ79|C3XZ79_BRAFL 112 QILSEHcDEVWFCKFSNDGTKLATGSKDSTLNI 144 68999*666********************9976 PP == domain 2 score: 15.7 bits; conditional E-value: 0.00032 EEEEEEESS.SSEEEEEEETTSSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGs 29 ++lrt++GH +v+ l++spd +l++++ tr|C3XZ79|C3XZ79_BRAFL 149 KLLRTFEGHqYGVSYLSWSPDDVYLIACG 177 689******655*************9887 PP == domain 3 score: 3.0 bits; conditional E-value: 3.3 EESS..SS.....EEEEEEETTSSEEEEEETTSE CS WD40 7 ltGH..ss.....vtslafspdgawlasGsdDgt 33 l+G +s v +l++ +dg+ +++ s D + tr|C3XZ79|C3XZ79_BRAFL 192 LDGNvmDSwegvrVQCLQYKKDGKTVLA-S-DTH 223 556665334666689***********95.6.655 PP == domain 4 score: 14.0 bits; conditional E-value: 0.0011 EESSSSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 7 ltGHssvtslafspdgawlasGsdDgtvriW 37 +t Hs+ +++++asGs+D++v++W tr|C3XZ79|C3XZ79_BRAFL 289 YTIHSC----FGGVNQDFVASGSEDNKVYVW 315 555533....23337799************* PP == domain 5 score: 24.6 bits; conditional E-value: 4.7e-07 EEEEEESS.SSEEEEEEETTSSE.......EEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw.......lasGsdDgtvriW 37 ++ +l GH v+++ +w las+sdDgtvr+W tr|C3XZ79|C3XZ79_BRAFL 322 PIAVLAGHtRTVNCV------TWnpqipglLASASDDGTVRLW 358 567899**555****......8888888888899********* PP >> tr|C3ZYW3|C3ZYW3_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_116611 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 13.5 0.4 0.0016 0.17 13 38 .] 61 87 .. 50 87 .. 0.75 2 ! 21.6 0.1 4.2e-06 0.00044 3 38 .] 94 132 .. 92 132 .. 0.86 3 ! 17.1 1.2 0.00012 0.012 3 38 .] 138 175 .. 136 175 .. 0.73 4 ! 17.0 1.1 0.00013 0.013 6 38 .] 185 219 .. 180 219 .. 0.85 5 ! 15.0 0.0 0.00055 0.057 3 38 .] 226 263 .. 224 263 .. 0.81 6 ? 1.7 0.1 8.3 8.6e+02 3 36 .. 270 305 .. 268 307 .. 0.62 Alignments for each domain: == domain 1 score: 13.5 bits; conditional E-value: 0.0016 EEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 13 vtslafspdgawl.asGsdDgtvriWd 38 ++ +s ++ + +++s Dg++ iWd tr|C3ZYW3|C3ZYW3_BRAFL 61 LFDVTWSENNEHVlVTASGDGSIQIWD 87 5688899999995256666*******9 PP == domain 2 score: 21.6 bits; conditional E-value: 4.2e-06 EEEEEESS.SSEEEEEEETTSSE........EEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw........lasGsdDgtvriWd 38 ++++l+ H + v+++ +w ++s+s+D++v++Wd tr|C3ZYW3|C3ZYW3_BRAFL 94 PIKSLREHtKEVYGV------DWsltrgeqfILSASWDQSVKLWD 132 6899****999****......7766666676899**********9 PP == domain 3 score: 17.1 bits; conditional E-value: 0.00012 EEEEEESSSS.EEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 3 clrtltGHss.vtslafspdgaw.lasGsdDgtvriWd 38 + t+ GH++ v+s +sp+ + +as s D+t+r+Wd tr|C3ZYW3|C3ZYW3_BRAFL 138 SIATFLGHQHvVYSAIWSPHIPCcFASTSGDHTLRVWD 175 577899**8866888677777774444445*******9 PP == domain 4 score: 17.0 bits; conditional E-value: 0.00013 EEESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 +lt+H v s++++++ + ++ sGs D t+r Wd tr|C3ZYW3|C3ZYW3_BRAFL 185 VLTAHdAEVLSCDWCKYDDNVVvSGSVDSTIRGWD 219 689**666****999999997549**********8 PP == domain 5 score: 15.0 bits; conditional E-value: 0.00055 EEEEEESSSS.EEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 3 clrtltGHss.vtslafspdgawla.sGsdDgtvriWd 38 ++ l+GH+ v ++ p + ++ s+s+D +v+iWd tr|C3ZYW3|C3ZYW3_BRAFL 226 PIFQLDGHKYaVKRVKCYPFERNVVgSSSYDFSVKIWD 263 677899**6669999888888889866679*******9 PP == domain 6 score: 1.7 bits; conditional E-value: 8.3 EEEEEESS.SSEEEEEEETTSSE.......EEEEETTSEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw.......lasGsdDgtvri 36 cl t++ H +v++l+ + +a +s+D vr+ tr|C3ZYW3|C3ZYW3_BRAFL 270 CLETIEHHsEFVYGLD------FnlhvpgqVADCSWDEWVRV 305 78888888555*9994......43344444555666666665 PP >> tr|C3YZW3|C3YZW3_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_69729 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.1 0.0 3 3.2e+02 13 28 .. 25 40 .. 12 45 .. 0.79 2 ! 16.8 0.1 0.00014 0.015 3 36 .. 58 92 .. 56 94 .. 0.89 3 ! 19.1 0.1 2.7e-05 0.0028 8 38 .] 106 136 .. 98 136 .. 0.74 4 ? 4.4 0.0 1.2 1.2e+02 4 33 .. 143 173 .. 139 174 .. 0.72 5 ? 7.0 0.0 0.18 18 7 35 .. 231 259 .. 225 260 .. 0.78 6 ! 16.4 0.0 0.00019 0.02 6 37 .. 271 304 .. 266 305 .. 0.86 Alignments for each domain: == domain 1 score: 3.1 bits; conditional E-value: 3 EEEEEEETTSSEEEEE CS WD40 13 vtslafspdgawlasG 28 v ++ f+p+++++a+G tr|C3YZW3|C3YZW3_BRAFL 25 VVDINFHPSKPLIAAG 40 67999*******9987 PP == domain 2 score: 16.8 bits; conditional E-value: 0.00014 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvri 36 ++rt++ H + ++++fs+dg+ l+++s+D+++ + tr|C3YZW3|C3YZW3_BRAFL 58 LVRTFKHHkKATRAVSFSKDGNSLITSSKDKSLQV 92 789***9*77789******************9976 PP == domain 3 score: 19.1 bits; conditional E-value: 2.7e-05 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 +H s+v+++ + +d ++la+G+dDg+v++Wd tr|C3YZW3|C3YZW3_BRAFL 106 QAHpSPVYCQLVISD-RLLATGDDDGNVKLWD 136 389999*99944444.34689**********9 PP == domain 4 score: 4.4 bits; conditional E-value: 1.2 EEEEESS.SSEEEEEEETTSSEEE.EEETTSE CS WD40 4 lrtltGH.ssvtslafspdgawla.sGsdDgt 33 + +l ++++++a++ ++++l+ +++ Dgt tr|C3YZW3|C3YZW3_BRAFL 143 IMELQENqDFISDMAVDEEKRFLLaTSG-DGT 173 55555564559999********862666.*98 PP == domain 5 score: 7.0 bits; conditional E-value: 0.18 EESS.SSEEEEEEETTSSEEEEEETTSEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvr 35 + GH sv ++ ++ + +++Gs+Dg +r tr|C3YZW3|C3YZW3_BRAFL 231 FPGHpMSVDCI-VPVTENIVCTGSMDGVIR 259 78996668666.777888899*******98 PP == domain 6 score: 16.4 bits; conditional E-value: 0.00019 EEESS..SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 6 tltGH..ssvtslafspdgawlasGsdDgtvriW 37 + H +++ ++ p++ ++as+s D+++++W tr|C3YZW3|C3YZW3_BRAFL 271 VVGEHeeFPIEQIRITPNSEMIASCSHDQKIKFW 304 5567876669***************99******* PP >> tr|C3YH46|C3YH46_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_88560 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 13.5 0.4 0.0015 0.16 13 38 .] 61 87 .. 50 87 .. 0.74 2 ! 21.6 0.1 4.2e-06 0.00044 3 38 .] 94 132 .. 92 132 .. 0.86 3 ! 17.1 1.2 0.00012 0.012 3 38 .] 138 175 .. 136 175 .. 0.73 4 ! 17.0 1.1 0.00013 0.013 6 38 .] 185 219 .. 180 219 .. 0.85 5 ! 15.0 0.0 0.00055 0.057 3 38 .] 226 263 .. 224 263 .. 0.81 Alignments for each domain: == domain 1 score: 13.5 bits; conditional E-value: 0.0015 EEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 13 vtslafspdgawl.asGsdDgtvriWd 38 ++ +s ++ + +++s Dg++ iWd tr|C3YH46|C3YH46_BRAFL 61 LFDVTWSENNEHVlVTASGDGSIQIWD 87 6688899999995256666*******9 PP == domain 2 score: 21.6 bits; conditional E-value: 4.2e-06 EEEEEESS.SSEEEEEEETTSSE........EEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw........lasGsdDgtvriWd 38 ++++l+ H + v+++ +w ++s+s+D++v++Wd tr|C3YH46|C3YH46_BRAFL 94 PIKSLREHtKEVYGV------DWsltrgeqfILSASWDQSVKLWD 132 6899****999****......7766666676899**********9 PP == domain 3 score: 17.1 bits; conditional E-value: 0.00012 EEEEEESSSS.EEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 3 clrtltGHss.vtslafspdgaw.lasGsdDgtvriWd 38 + t+ GH++ v+s +sp+ + +as s D+t+r+Wd tr|C3YH46|C3YH46_BRAFL 138 SIATFLGHQHvVYSAIWSPHIPCcFASTSGDHTLRVWD 175 577899**8866888677777774444445*******9 PP == domain 4 score: 17.0 bits; conditional E-value: 0.00013 EEESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 +lt+H v s++++++ + ++ sGs D t+r Wd tr|C3YH46|C3YH46_BRAFL 185 VLTAHdAEVLSCDWCKYDDNVVvSGSVDSTIRGWD 219 689**666****999999997549**********8 PP == domain 5 score: 15.0 bits; conditional E-value: 0.00055 EEEEEESSSS.EEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 3 clrtltGHss.vtslafspdgawla.sGsdDgtvriWd 38 ++ l+GH+ v ++ p + ++ s+s+D +v+iWd tr|C3YH46|C3YH46_BRAFL 226 PIFQLDGHKYaVKRVKCYPFERNVVgSSSYDFSVKIWD 263 677899**6669999888888889866679*******9 PP >> tr|C3ZR20|C3ZR20_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_124923 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.1 0.0 0.00048 0.05 2 37 .. 298 333 .. 297 334 .. 0.93 2 ! 22.5 0.0 2.3e-06 0.00024 6 38 .] 475 511 .. 470 511 .. 0.85 3 ? 6.2 0.0 0.32 33 23 38 .] 631 646 .. 615 646 .. 0.88 4 ? 2.7 0.0 3.9 4.1e+02 23 38 .] 823 838 .. 813 838 .. 0.86 5 ? 8.6 0.0 0.058 6 11 38 .] 856 883 .. 845 883 .. 0.89 6 ! 14.9 0.3 0.00058 0.06 4 37 .. 902 935 .. 898 935 .. 0.78 Alignments for each domain: == domain 1 score: 15.1 bits; conditional E-value: 0.00048 EEEEEEESSSSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGHssvtslafspdgawlasGsdDgtvriW 37 q++r+l+ ++++ +a++ + +a+G+ D+ +riW tr|C3ZR20|C3ZR20_BRAFL 298 QPVRSLSVSKGINTFAYCARANVIATGGVDKIIRIW 333 78999999999****9999***************** PP == domain 2 score: 22.5 bits; conditional E-value: 2.3e-06 E.EESSSS...EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 t.ltGHss...vtslafspdgawlasGsdDgtvriWd 38 t ++H++ vts+af++ g +++G+ Dg++++Wd tr|C3ZR20|C3ZR20_BRAFL 475 TiVDAHGPnieVTSVAFDKTGYRMTTGGLDGSIKVWD 511 425699667799************************9 PP == domain 3 score: 6.2 bits; conditional E-value: 0.32 SEEEEEETTSEEEEEE CS WD40 23 awlasGsdDgtvriWd 38 ++la+G+ +g++ iWd tr|C3ZR20|C3ZR20_BRAFL 631 DLLATGCTNGNILIWD 646 469***99*******9 PP == domain 4 score: 2.7 bits; conditional E-value: 3.9 SEEEEEETTSEEEEEE CS WD40 23 awlasGsdDgtvriWd 38 + l+s++ D +r+W+ tr|C3ZR20|C3ZR20_BRAFL 823 PVLVSCHHDALIRFWS 838 4589**99*******5 PP == domain 5 score: 8.6 bits; conditional E-value: 0.058 SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriWd 38 s+vt+++ ++d ++l++++ +g + +Wd tr|C3ZR20|C3ZR20_BRAFL 856 SPVTAVCADDDCNLLITADHKGYITMWD 883 47****************88*******9 PP == domain 6 score: 14.9 bits; conditional E-value: 0.00058 EEEEESS.SSEEEEEEETTSSE...EEEEETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgaw...lasGsdDgtvriW 37 l ++GH + v sl f + ++sGs Dg+vr+W tr|C3ZR20|C3ZR20_BRAFL 902 LICWRGHlNRVVSL-FYT---LpgfIVSGSTDGSVRVW 935 55679**9999999.444...255499*********** PP >> tr|C3Y089|C3Y089_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_77103 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 4.3 0.0 1.3 1.4e+02 6 22 .. 60 77 .. 57 83 .. 0.85 2 ! 22.5 0.1 2.3e-06 0.00024 11 38 .] 108 135 .. 99 135 .. 0.87 3 ? 3.8 0.0 1.9 1.9e+02 23 38 .] 176 190 .. 160 190 .. 0.73 4 ! 23.4 0.2 1.2e-06 0.00012 2 38 .] 197 236 .. 196 236 .. 0.85 5 ! 22.1 0.4 3.1e-06 0.00032 3 37 .. 243 279 .. 241 280 .. 0.82 Alignments for each domain: == domain 1 score: 4.3 bits; conditional E-value: 1.3 EEESS.SSEEEEEEETTS CS WD40 6 tltGH.ssvtslafspdg 22 +tGH + + +l +sp++ tr|C3Y089|C3Y089_BRAFL 60 QWTGHgNAIFDLEWSPHQ 77 578**999*******986 PP == domain 2 score: 22.5 bits; conditional E-value: 2.3e-06 SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriWd 38 +svt++ ++++++ +++Gs Dgt+++Wd tr|C3Y089|C3Y089_BRAFL 108 QSVTCVVYQDENTVVSAGSVDGTIKLWD 135 46*************9***********9 PP == domain 3 score: 3.8 bits; conditional E-value: 1.9 SEEEEEETTSEEEEEE CS WD40 23 awlasGsdDgtvriWd 38 +++as++ D+t+++++ tr|C3Y089|C3Y089_BRAFL 176 RLFASCT-DNTIYMYN 190 3467777.*****997 PP == domain 4 score: 23.4 bits; conditional E-value: 1.2e-06 EEEEEEESS.SS...EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ss...vtslafspdgawlasGsdDgtvriWd 38 q++ ++tGH +s v +a sp ++l+sGs D++ +iW+ tr|C3Y089|C3Y089_BRAFL 197 QPVSSFTGHsCSsfyV-RCALSPCEDYLISGSSDNSAYIWK 236 7999*****7336899.4447**********99*******6 PP == domain 5 score: 22.1 bits; conditional E-value: 3.1e-06 EEEEEESS.SSEEEEEEETTSSE.......EEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw.......lasGsdDgtvriW 37 c ++ltGH + vt++ +w ++++sdD+t r+W tr|C3Y089|C3Y089_BRAFL 243 CPWKLTGHsGEVTAV------SWcqkdftkVITCSDDNTMRVW 279 77899***555****......77777777889*********** PP >> tr|C3YYJ5|C3YYJ5_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_118356 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 24.9 0.0 3.9e-07 4e-05 5 38 .] 308 342 .. 305 342 .. 0.91 2 ! 21.5 0.0 4.6e-06 0.00048 2 38 .] 347 387 .. 346 387 .. 0.85 3 ? 4.2 0.1 1.4 1.4e+02 10 38 .] 401 430 .. 392 430 .. 0.76 4 ! 16.4 0.0 0.00019 0.02 6 38 .] 439 472 .. 434 472 .. 0.85 Alignments for each domain: == domain 1 score: 24.9 bits; conditional E-value: 3.9e-07 EEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGHss.vtslafspdgawlasGsdDgtvriWd 38 r l GHs+ v++l++spd++ lasG D+++ +W+ tr|C3YYJ5|C3YYJ5_BRAFL 308 RRLAGHSHeVCALKYSPDHQHLASGANDNKLFVWN 342 6678**778****************99*******8 PP == domain 2 score: 21.5 bits; conditional E-value: 4.6e-06 EEEEEEESS.SSEEEEEEETTSSEEE.EEE..TTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawla.sGs..dDgtvriWd 38 ++++ +t H v+++a+sp+++ l+ sG+ D+ +r+W+ tr|C3YYJ5|C3YYJ5_BRAFL 347 NPVQQYTEHlAAVRAIAWSPHQRGLLaSGGgtADRCIRFWN 387 68899****999************752664447*******8 PP == domain 3 score: 4.2 bits; conditional E-value: 1.4 SSSEEEEEEETTSSEEEEE...ETTSEEEEEE CS WD40 10 HssvtslafspdgawlasG...sdDgtvriWd 38 v+ la+s++ + l+s s + + +W+ tr|C3YYJ5|C3YYJ5_BRAFL 401 S-QVCNLAWSKHANELVSThgfS-QNQILVWK 430 3.599***********9953244.99999995 PP == domain 4 score: 16.4 bits; conditional E-value: 0.00019 EEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGHss.vtslafspdgawlasGsdDgtvriWd 38 +l GHs v la spdg+ +++G D t+r+W+ tr|C3YYJ5|C3YYJ5_BRAFL 439 KLMGHSYrVLYLAMSPDGKAIVTGAGDETLRLWN 472 566995579999************66*******8 PP >> tr|C3Y5S4|C3Y5S4_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_125481 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.3 0.1 0.00042 0.044 12 38 .] 20 47 .. 10 47 .. 0.85 2 ? 3.8 0.0 1.9 1.9e+02 2 34 .. 51 83 .. 50 84 .. 0.71 3 ! 27.2 0.2 7.2e-08 7.5e-06 8 38 .] 97 128 .. 90 128 .. 0.88 4 ! 17.9 0.0 6.3e-05 0.0066 7 38 .] 225 266 .. 219 266 .. 0.79 5 ? 6.2 0.0 0.31 32 10 29 .. 277 299 .. 270 304 .. 0.75 Alignments for each domain: == domain 1 score: 15.3 bits; conditional E-value: 0.00042 SEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 12 svtslafspdgawla.sGsdDgtvriWd 38 ++++++fsp ++ l+ +s+D++vr++d tr|C3Y5S4|C3Y5S4_BRAFL 20 GISAVKFSPTSSQLLlVSSWDCSVRLYD 47 499**********64489********98 PP == domain 2 score: 3.8 bits; conditional E-value: 1.9 EEEEEEESS.SSEEEEE.EETTSSEEEEEETTSEE CS WD40 2 qclrtltGH.ssvtsla.fspdgawlasGsdDgtv 34 ++lr +H s v +++ f+p +++ sG+ D+ + tr|C3Y5S4|C3Y5S4_BRAFL 51 NNLRNKYTHsSAVLDCCfFDPVHPY--SGGLDQML 83 5566655795669777769999999..79888766 PP == domain 3 score: 27.2 bits; conditional E-value: 7.2e-08 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 H +++++ ++pd + +++Gs+D+tv++Wd tr|C3Y5S4|C3Y5S4_BRAFL 97 GNHdAPIRCVEYCPDVNVVITGSWDQTVKLWD 128 457777*************************9 PP == domain 4 score: 17.9 bits; conditional E-value: 6.3e-05 EESS..SS........EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH..ss........vtslafspdgawlasGsdDgtvriWd 38 ++ H + v+++af++ ++ +a+G+ Dg v iWd tr|C3Y5S4|C3Y5S4_BRAFL 225 FKCHriKEdgiekiypVNAIAFHSMHNTFATGGSDGFVNIWD 266 55665533456666669***************88*******9 PP == domain 5 score: 6.2 bits; conditional E-value: 0.31 S...SSEEEEEEETTSSEEEEEE CS WD40 10 H...ssvtslafspdgawlasGs 29 H +s+ slafs+dg+ la +s tr|C3Y5S4|C3Y5S4_BRAFL 277 HrypTSIASLAFSHDGSVLAIAS 299 54344599**********98543 PP >> tr|C3Y7A1|C3Y7A1_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_82834 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.3 0.1 0.00042 0.044 9 38 .] 41 71 .. 35 71 .. 0.86 2 ! 11.8 0.0 0.0056 0.58 9 38 .] 84 114 .. 75 114 .. 0.86 3 ? 6.0 0.0 0.36 37 8 37 .. 174 204 .. 167 205 .. 0.88 4 ! 16.8 0.0 0.00014 0.015 15 38 .] 267 290 .. 258 290 .. 0.93 5 ! 18.1 0.1 5.6e-05 0.0058 4 38 .] 301 336 .. 298 336 .. 0.86 Alignments for each domain: == domain 1 score: 15.3 bits; conditional E-value: 0.00042 SS..SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH..ssvtslafspdgawlasGsdDgtvriWd 38 H ++v++l+f ++g+ + +G+ +g++ +W+ tr|C3Y7A1|C3Y7A1_BRAFL 41 EHqaKFVHCLDFGDNGDVI-TGDSKGSILVWK 71 587677************7.7*66*******6 PP == domain 2 score: 11.8 bits; conditional E-value: 0.0056 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 +H +++ ++++ ++g++++ G++D+ v +Wd tr|C3Y7A1|C3Y7A1_BRAFL 84 AHkGGIMAMRVTSEGTLVTGGGKDRRVVLWD 114 7866699**********97679********9 PP == domain 3 score: 6.0 bits; conditional E-value: 0.36 ESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriW 37 +GH + ++la +p ++ ++++++ g v +W tr|C3Y7A1|C3Y7A1_BRAFL 174 KGHaDELWGLAAHPRKPQFVTCDYSGLVVLW 204 6**777****************99******* PP == domain 4 score: 16.8 bits; conditional E-value: 0.00014 EEEEETTSSEEEEEETTSEEEEEE CS WD40 15 slafspdgawlasGsdDgtvriWd 38 +l+fspdga la Gs D+++++++ tr|C3Y7A1|C3Y7A1_BRAFL 267 CLRFSPDGAILAIGSHDNHIYMYN 290 99************99*****997 PP == domain 5 score: 18.1 bits; conditional E-value: 5.6e-05 EEEEESS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawl.asGsdDgtvriWd 38 ++ l+GH s+vt+l+fs dg+++ ++++ D + Wd tr|C3Y7A1|C3Y7A1_BRAFL 301 TTRLSGHsSFVTHLDFSTDGRYMqSTSG-DYELLYWD 336 56699**777************888899.99999998 PP >> tr|C3XRY5|C3XRY5_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_123921 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.7 0.0 1.9 2e+02 7 38 .] 51 84 .. 45 84 .. 0.76 2 ? 6.9 0.0 0.19 20 10 28 .. 105 125 .. 95 137 .. 0.75 3 ! 17.8 0.1 7.1e-05 0.0073 5 38 .] 142 177 .. 138 177 .. 0.82 4 ? 9.7 0.0 0.025 2.6 11 28 .. 410 427 .. 398 435 .. 0.75 5 ? 1.5 0.1 9.4 9.8e+02 7 38 .] 509 551 .. 503 551 .. 0.60 6 ! 15.8 0.0 0.00029 0.03 2 38 .] 556 595 .. 555 595 .. 0.93 7 ? 10.1 0.2 0.019 2 3 22 .. 601 621 .. 599 624 .. 0.86 Alignments for each domain: == domain 1 score: 3.7 bits; conditional E-value: 1.9 EESS.SSEEEEE..EETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtsla..fspdgawlasGsdDgtvriWd 38 l +H + vt+ + f++ ++l+++ + +W+ tr|C3XRY5|C3XRY5_BRAFL 51 LVAHkKAVTATSfgFHSQPTLLCTAA-EDYIIVWN 84 56998889555454999999999999.77777776 PP == domain 2 score: 6.9 bits; conditional E-value: 0.19 S..SSEEEEEEETTSSEEEEE CS WD40 10 H..ssvtslafspdgawlasG 28 + + v +++fspd a++a++ tr|C3XRY5|C3XRY5_BRAFL 105 QvlGYVQHVSFSPDDALVAAC 125 4434499***********987 PP == domain 3 score: 17.8 bits; conditional E-value: 7.1e-05 EEEESSSS.EEEEEEETTSSE.EEEE.ETTSEEEEEE CS WD40 5 rtltGHss.vtslafspdgaw.lasG.sdDgtvriWd 38 tl+GH+s vts f+p+++ ++ + s+D+t ++Wd tr|C3XRY5|C3XRY5_BRAFL 142 STLEGHNSiVTSAEFCPHHKStIV-SiSEDRTFKVWD 177 579***7757****9999999544.6699*******9 PP == domain 4 score: 9.7 bits; conditional E-value: 0.025 SSEEEEEEETTSSEEEEE CS WD40 11 ssvtslafspdgawlasG 28 ++++s+ fs+dg++la+G tr|C3XRY5|C3XRY5_BRAFL 410 TPINSITFSDDGTYLACG 427 46*************998 PP == domain 5 score: 1.5 bits; conditional E-value: 9.4 EESS.SSEEEEE........EETTSSE..EEEEETTSEEEEEE CS WD40 7 ltGH.ssvtsla........fspdgaw..lasGsdDgtvriWd 38 ++H +v++++ +p++a+ ++++ +++Wd tr|C3XRY5|C3XRY5_BRAFL 509 PDAHtRPVHAFCqnkgspfvSHPSSAYdlFLTSALTDGIKLWD 551 4689666998886677777755555556533444466666666 PP == domain 6 score: 15.8 bits; conditional E-value: 0.00029 EEEEEEESS.SS..EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ss..vtslafspdgawlasGsdDgtvriWd 38 +c+r ++GH + ++l sp +++a+G +D++ +i+d tr|C3XRY5|C3XRY5_BRAFL 556 RCVRRYEGHlNRayPCGLTMSPCARFIATGAEDKSAYIYD 595 79*******9887779**********************98 PP == domain 7 score: 10.1 bits; conditional E-value: 0.019 EEEEEESSSS.EEEEEEETTS CS WD40 3 clrtltGHss.vtslafspdg 22 +l++ltGH++ v+++af+p+ tr|C3XRY5|C3XRY5_BRAFL 601 PLHKLTGHTDvVSDVAFHPHT 621 79******8857*******86 PP >> tr|C3Z455|C3Z455_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_122043 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 38.1 0.0 2.6e-11 2.7e-09 4 38 .] 7 42 .. 4 42 .. 0.95 2 ! 15.3 5.1 0.00043 0.044 12 38 .] 61 97 .. 46 97 .. 0.72 3 ! 15.3 0.0 0.00043 0.045 13 37 .. 111 137 .. 104 138 .. 0.82 Alignments for each domain: == domain 1 score: 38.1 bits; conditional E-value: 2.6e-11 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +r+ltGH ++v +++fspdga+la+Gs+D v +Wd tr|C3Z455|C3Z455_BRAFL 7 MRKLTGHqNDVVACDFSPDGALLATGSYDTRVILWD 42 789****999*9***********************9 PP == domain 2 score: 15.3 bits; conditional E-value: 0.00043 S..........EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 s..........vtslafspdgawlasGsdDgtvriWd 38 + v++++fs+dg +a+ +dD+ vr+W+ tr|C3Z455|C3Z455_BRAFL 61 CifsggsndfwVRHISFSHDGCHIATLCDDKYVRFWS 97 03333334477*************98678*******5 PP == domain 3 score: 15.3 bits; conditional E-value: 0.00043 EEEEE..EETTSSEEEEEETTSEEEEE CS WD40 13 vtsla..fspdgawlasGsdDgtvriW 37 v++l+ +spdg la+G++Dg+v ++ tr|C3Z455|C3Z455_BRAFL 111 VNALCcnYSPDGCCLATGTRDGNVVFY 137 5555555****************9875 PP >> tr|C3ZIF8|C3ZIF8_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_80761 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 29.6 0.4 1.3e-08 1.3e-06 7 38 .] 194 224 .. 189 224 .. 0.90 2 ! 20.5 0.2 9.7e-06 0.001 5 38 .] 232 285 .. 229 285 .. 0.90 3 ! 12.4 0.0 0.0034 0.36 11 38 .] 299 326 .. 292 326 .. 0.88 4 ! 17.0 0.1 0.00013 0.013 2 37 .. 331 365 .. 330 366 .. 0.90 Alignments for each domain: == domain 1 score: 29.6 bits; conditional E-value: 1.3e-08 EESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGHss.vtslafspdgawlasGsdDgtvriWd 38 l+GH + vts+ s dg++l++Gs+D tv++Wd tr|C3ZIF8|C3ZIF8_BRAFL 194 LKGHEDvVTSV--SADGSLLVTGSRDTTVKVWD 224 79**7757***..*******************9 PP == domain 2 score: 20.5 bits; conditional E-value: 9.7e-06 EEEESS.SSEEEEE...................EETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtsla...................fspdgawlasGsdDgtvriWd 38 r+l GH + vts+ +s ++++sGs D+++r+W+ tr|C3ZIF8|C3ZIF8_BRAFL 232 RSLGGHtGTVTSVIllspdesrrlsllydlfsdWSEKDRLVISGSTDCSIRLWS 285 8999**777******9999999999999999999999999*************5 PP == domain 3 score: 12.4 bits; conditional E-value: 0.0034 SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriWd 38 ssv sl++s + +++sGsd g++ +Wd tr|C3ZIF8|C3ZIF8_BRAFL 299 SSVQSLCYSEEEGLIISGSDGGKIQVWD 326 479************************9 PP == domain 4 score: 17.0 bits; conditional E-value: 0.00013 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +++++++GH +svt+l + +g+ ++s ++ g v++W tr|C3ZIF8|C3ZIF8_BRAFL 331 SNVQSIRGHnTSVTCL--QVEGTHVVSVCEEGIVKVW 365 68999****888****..999999*99999******* PP >> tr|C3YQL5|C3YQL5_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_82717 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 5.6 0.0 0.48 50 13 28 .. 84 99 .. 71 107 .. 0.82 2 ! 25.3 0.1 3e-07 3.1e-05 1 37 [. 112 149 .. 112 149 .. 0.95 3 ? 6.0 0.0 0.38 39 2 37 .. 167 205 .. 166 206 .. 0.72 4 ! 32.1 0.5 2.2e-09 2.2e-07 5 38 .] 268 302 .. 264 302 .. 0.93 Alignments for each domain: == domain 1 score: 5.6 bits; conditional E-value: 0.48 EEEEEEETTSSEEEEE CS WD40 13 vtslafspdgawlasG 28 v+++a+spdg+++++G tr|C3YQL5|C3YQL5_BRAFL 84 VSAMAVSPDGTLVVAG 99 9999*********987 PP == domain 2 score: 25.3 bits; conditional E-value: 3e-07 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 g++l +lt H ++vt+l+f +dg+ ++sG++D+ v +W tr|C3YQL5|C3YQL5_BRAFL 112 GNLLAVLTRHyQGVTCLSFTDDGSHFLSGGEDNLVLVW 149 5789999***999************************* PP == domain 3 score: 6.0 bits; conditional E-value: 0.38 EEEEEEESS.SSEEEEEEETTSSE........EEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw........lasGsdDgtvriW 37 ++ +tl+ H +vt+l + +s+s D+t++++ tr|C3YQL5|C3YQL5_BRAFL 167 EPRHTLSHHsLPVTDL-Y-----CgcgglqarAVSASLDQTCKLF 205 57899*999555****.3.....244444777567888****996 PP == domain 4 score: 32.1 bits; conditional E-value: 2.2e-09 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++++GH + vt+l++s dg l+sGs D+t r+Wd tr|C3YQL5|C3YQL5_BRAFL 268 QIFRGHsKQVTCLSVSMDGGQLLSGSHDHTARLWD 302 689***888****************99*******9 PP >> tr|C3YJD8|C3YJD8_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_126931 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.9 0.1 0.00014 0.014 4 38 .] 347 381 .. 344 381 .. 0.86 2 ! 19.0 0.1 2.8e-05 0.0029 2 38 .] 387 432 .. 386 432 .. 0.91 3 ! 23.2 0.0 1.3e-06 0.00014 8 38 .] 444 476 .. 436 476 .. 0.85 4 ? 6.6 0.5 0.23 24 9 38 .] 539 568 .. 532 568 .. 0.81 5 ? 5.1 0.1 0.69 72 12 38 .] 642 668 .. 620 668 .. 0.75 6 ? 7.4 0.1 0.13 13 8 37 .. 694 726 .. 689 727 .. 0.69 Alignments for each domain: == domain 1 score: 16.9 bits; conditional E-value: 0.00014 EEEEESSSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGHssvtslafspdgawlasGsdDgtvriWd 38 +++++ ++v +++++++ + +++Gs D+ vr+W+ tr|C3YJD8|C3YJD8_BRAFL 347 TYVFKVSKGVECFDYNKHMNIIVTGSSDHRVRLWN 381 556677788****99999999****99*******8 PP == domain 2 score: 19.0 bits; conditional E-value: 2.8e-05 EEEEEEESS.SSEEEEE........EETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtsla........fspdgawlasGsdDgtvriWd 38 +++++l+GH + + +++ fs +++ +++GsdD tv +Wd tr|C3YJD8|C3YJD8_BRAFL 387 KPITVLSGHhTTIIDVKlfepmnqvFSYSKDAVVTGSDDSTVAVWD 432 68999****87787999999999999999999*************9 PP == domain 3 score: 23.2 bits; conditional E-value: 1.3e-06 ESSSS..EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGHss..vtslafspdgawlasGsdDgtvriWd 38 +H++ +t++ f+ + + l++G +Dgt++iW+ tr|C3YJD8|C3YJD8_BRAFL 444 NAHGDeeITCMTFDTSLRRLITGARDGTIKIWN 476 4894458*************************8 PP == domain 4 score: 6.6 bits; conditional E-value: 0.23 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 +H +++ s+a +p + + a++s Dg + +W+ tr|C3YJD8|C3YJD8_BRAFL 539 AHsDDILSVAHCPPNLL-ATASFDGDLIVWS 568 79666999988888777.67888*******5 PP == domain 5 score: 5.1 bits; conditional E-value: 0.69 SEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriWd 38 sv +la spd++ l++G+ g + +Wd tr|C3YJD8|C3YJD8_BRAFL 642 SVLGLASSPDNNVLVTGDTMGYIAVWD 668 3899************97556666665 PP == domain 6 score: 7.4 bits; conditional E-value: 0.13 ESS.SSEEEEEEETTSSE........EEEEETTSEEEEE CS WD40 8 tGH.ssvtslafspdgaw........lasGsdDgtvriW 37 ++H s + s+ + ++s++ D+t r+W tr|C3YJD8|C3YJD8_BRAFL 694 RAHhSAIVSV------EYvdhevrpfVVSAGTDKTARLW 726 5676777788......5544455555777766******* PP >> tr|C3YX31|C3YX31_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_104267 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 18.9 0.1 3e-05 0.0031 10 37 .. 91 119 .. 83 120 .. 0.87 2 ! 23.5 0.0 1.1e-06 0.00011 4 38 .] 127 162 .. 124 162 .. 0.93 3 ! 19.3 0.1 2.3e-05 0.0024 2 38 .] 167 204 .. 166 204 .. 0.84 4 ? 3.5 0.0 2.3 2.4e+02 11 34 .. 281 303 .. 271 304 .. 0.62 Alignments for each domain: == domain 1 score: 18.9 bits; conditional E-value: 3e-05 S.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvriW 37 H +sv++l++sp g + +s+s Dgt ++W tr|C3YX31|C3YX31_BRAFL 91 HsKSVSCLDVSPGGGLGVSCSTDGTMKVW 119 9889************557888******* PP == domain 2 score: 23.5 bits; conditional E-value: 1.1e-06 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 r+l GH + v+ ++f p+g ++sG++D ++iW+ tr|C3YX31|C3YX31_BRAFL 127 RRELQGHiGEVNTCRFFPSGVVVLSGGMDAQLKIWS 162 57899**999*************************5 PP == domain 3 score: 19.3 bits; conditional E-value: 2.3e-05 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +c tl+GH +++ + a+ g+ ++s+s+Dgt ++Wd tr|C3YX31|C3YX31_BRAFL 167 SCPVTLRGHkGGILDTAVIERGRNVLSCSRDGTAKLWD 204 67889****777977776888888999**********9 PP == domain 4 score: 3.5 bits; conditional E-value: 2.3 SSEEEEEEETTSSE.....EEEEETTSEE CS WD40 11 ssvtslafspdgaw.....lasGsdDgtv 34 s +++ a+ +++G+ Dg++ tr|C3YX31|C3YX31_BRAFL 281 SALNCC------AFlssirVVCGGQDGKI 303 447888......55333334679****98 PP >> tr|C3XW19|C3XW19_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_135356 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 11.6 0.0 0.0063 0.66 8 37 .. 22 52 .. 16 53 .. 0.83 2 ! 27.1 0.6 7.7e-08 8e-06 2 38 .] 78 115 .. 77 115 .. 0.95 3 ! 21.8 0.0 3.7e-06 0.00039 1 38 [] 119 157 .. 119 157 .. 0.90 4 ? 6.8 0.1 0.21 22 12 34 .. 303 325 .. 295 327 .. 0.82 Alignments for each domain: == domain 1 score: 11.6 bits; conditional E-value: 0.0063 ESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriW 37 H +v+ ++f+p g+ las++d + +W tr|C3XW19|C3XW19_BRAFL 22 IRHsRPVNVVRFCPTGNILASAGDESVIFLW 52 568445999**************99999999 PP == domain 2 score: 27.1 bits; conditional E-value: 7.7e-08 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +c + l+GH ++++l++s+dg+ +as+s D++ +W+ tr|C3XW19|C3XW19_BRAFL 78 TCYKMLRGHlEDIYDLSWSRDGTCIASASVDNSAILWN 115 78899********************************8 PP == domain 3 score: 21.8 bits; conditional E-value: 3.7e-06 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g++l +++ H s+v ++a++p ++++a+ s D+ +r+++ tr|C3XW19|C3XW19_BRAFL 119 GEKLAIFSEHkSFVQGVAWDPCNQFVATLSTDRICRVYN 157 578999****777*************98677******97 PP == domain 4 score: 6.8 bits; conditional E-value: 0.21 SEEEEEEETTSSEEEEEETTSEE CS WD40 12 svtslafspdgawlasGsdDgtv 34 ++la+s dg+ l+ +s Dg + tr|C3XW19|C3XW19_BRAFL 303 RLSDLAWSEDGSILMISSTDGYC 325 4789*********9877779976 PP >> tr|C3ZMT3|C3ZMT3_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_59244 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.8 0.1 0.0003 0.032 7 38 .] 8 39 .. 2 39 .. 0.87 2 ? 3.7 0.1 1.9 2e+02 12 28 .. 56 72 .. 44 81 .. 0.74 3 ? 8.5 0.0 0.058 6 3 38 .] 86 122 .. 84 122 .. 0.82 4 ! 21.6 0.1 4.3e-06 0.00044 2 38 .] 127 165 .. 126 165 .. 0.89 5 ! 17.3 0.1 0.0001 0.011 3 38 .] 229 267 .. 227 267 .. 0.78 Alignments for each domain: == domain 1 score: 15.8 bits; conditional E-value: 0.0003 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 GH +sv +la s dg + asG++ g + +W+ tr|C3ZMT3|C3ZMT3_BRAFL 8 TGGHqDSVLCLACSTDGVL-ASGGESGELCLWS 39 46**888************.79**********5 PP == domain 2 score: 3.7 bits; conditional E-value: 1.9 SEEEEEEETTSSEEEEE CS WD40 12 svtslafspdgawlasG 28 +vts++fs ++ l+++ tr|C3ZMT3|C3ZMT3_BRAFL 56 DVTSVCFSVKHPTLLCA 72 5**********999865 PP == domain 3 score: 8.5 bits; conditional E-value: 0.058 EEEEEESSSS..EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGHss..vtslafspdgawlasGsdDgtvriWd 38 +++ + s ++ + f+ ++la+++d g ++i d tr|C3ZMT3|C3ZMT3_BRAFL 86 PVHQFNFN-SeeINEVTFNEKENFLAACDDSGEIKIID 122 66777666.236****************99***99965 PP == domain 4 score: 21.6 bits; conditional E-value: 4.3e-06 EEEEEEESSSSE.EEEEEETTSSE.EEEEETTSEEEEEE CS WD40 2 qclrtltGHssv.tslafspdgaw.lasGsdDgtvriWd 38 ++ +tl+GH ++ +s +f+p ++w ++sG+ D++v +Wd tr|C3ZMT3|C3ZMT3_BRAFL 127 KLFKTLRGHENIcSSAKFCPKKTWgMVSGGLDQNVILWD 165 6789*****66758888********999**********9 PP == domain 5 score: 17.3 bits; conditional E-value: 0.0001 EEEEEESS.SSEEEEE...EETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtsla...fspdgawlasGsdDgtvriWd 38 +++tl+GH ++v+ + ++ d +++++G Dg++ +Wd tr|C3ZMT3|C3ZMT3_BRAFL 229 HTGTLEGHsQGVSQVHfpqYQVDDKLVSAGN-DGKIIVWD 267 6789****777*8886777777777776555.*******9 PP >> tr|C3ZSA7|C3ZSA7_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_79482 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 21.8 0.1 3.6e-06 0.00038 4 38 .] 209 244 .. 206 244 .. 0.94 2 ? 10.9 0.1 0.011 1.1 12 37 .. 260 285 .. 248 286 .. 0.85 3 ? 9.2 0.0 0.037 3.9 20 38 .] 307 325 .. 294 325 .. 0.70 4 ! 22.9 0.1 1.7e-06 0.00018 9 38 .] 336 369 .. 330 369 .. 0.84 Alignments for each domain: == domain 1 score: 21.8 bits; conditional E-value: 3.6e-06 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 rtl+GH ++++ + +d++ l+s+s Dg++ +Wd tr|C3ZSA7|C3ZSA7_BRAFL 209 RRTLRGHlAKIYAMHWGSDSRNLVSASQDGKLIVWD 244 689****999*************************9 PP == domain 2 score: 10.9 bits; conditional E-value: 0.011 SEEEEEEETTSSEEEEEETTSEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriW 37 +v +a+ p+g+++a+G+ D+ + i+ tr|C3ZSA7|C3ZSA7_BRAFL 260 WVMTCAYAPSGSYVACGGLDNICSIY 285 488889*****************998 PP == domain 3 score: 9.2 bits; conditional E-value: 0.037 TTSSEEEEEETTSEEEEEE CS WD40 20 pdgawlasGsdDgtvriWd 38 ++g+ +a+GsdD t+r++d tr|C3ZSA7|C3ZSA7_BRAFL 307 SNGNAFATGSDDATCRLFD 325 3455569**********98 PP == domain 4 score: 22.9 bits; conditional E-value: 1.7e-06 SS.SS...EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ss...vtslafspdgawlasGsdDgtvriWd 38 H + +ts+afs++g++l++G dD ++ +Wd tr|C3ZSA7|C3ZSA7_BRAFL 336 SHdNIicgITSVAFSKSGRLLLAGYDDFNCNVWD 369 574336669************************9 PP >> tr|C3XZJ2|C3XZJ2_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_65670 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.7 0.1 1.9e-06 0.0002 2 38 .] 266 303 .. 265 303 .. 0.94 2 ? 6.2 0.0 0.32 33 4 36 .. 310 346 .. 307 346 .. 0.71 3 ? 1.6 0.0 8.8 9.1e+02 5 33 .. 359 389 .. 355 394 .. 0.67 4 ? 1.7 0.0 8.4 8.7e+02 13 38 .] 424 442 .. 414 442 .. 0.76 5 ? 6.0 0.0 0.38 39 10 38 .] 462 497 .. 454 497 .. 0.75 6 ? 9.3 0.0 0.033 3.5 4 37 .. 507 544 .. 504 545 .. 0.81 7 ! 17.4 0.1 9.2e-05 0.0096 6 37 .. 554 587 .. 549 587 .. 0.84 Alignments for each domain: == domain 1 score: 22.7 bits; conditional E-value: 1.9e-06 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++++l+ H ++v+ l f++ g++lasGsdD +v +Wd tr|C3XZJ2|C3XZJ2_BRAFL 266 ELQHKLDHHeGCVNTLHFNQPGTLLASGSDDLNVVLWD 303 68999**99888*************************9 PP == domain 2 score: 6.2 bits; conditional E-value: 0.32 EEEE.ESS.SSEEEEE...EETTSSEEEEEETTSEEEE CS WD40 4 lrtl.tGH.ssvtsla...fspdgawlasGsdDgtvri 36 + ++ +GH s+v + +s d + +s+ +Dg vr+ tr|C3XZJ2|C3XZJ2_BRAFL 310 VLIYnSGHrSNVFQAKfmpYSGDCTV-VSCARDGQVRV 346 55663699988977767656666666.57989****97 PP == domain 3 score: 1.6 bits; conditional E-value: 8.8 EEEESS.SSEEEEEEETTSSE.EEEEETTSE CS WD40 5 rtltGH.ssvtslafspdgaw.lasGsdDgt 33 ++l+ H + + la +pd++ ++++++D tr|C3XZJ2|C3XZJ2_BRAFL 359 KKLSQHrGAAHKLALDPDSNCtFLTCGEDAV 389 5677776556777777777776457887865 PP == domain 4 score: 1.7 bits; conditional E-value: 8.4 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 v+s + + G++D+ vr++d tr|C3XZJ2|C3XZJ2_BRAFL 424 VNSH------EF-SVGGRDHWVRVFD 442 5555......55.56999******98 PP == domain 5 score: 6.0 bits; conditional E-value: 0.38 S..SS.....EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 H..ss.....vtslafspdgawlasGsdDgtvriWd 38 H +s +t+l +++dg+ l+++ D ++++d tr|C3XZJ2|C3XZJ2_BRAFL 462 HlvDSdikanITCLVYNHDGSELLASYNDEEIYLFD 497 3432235567*************9998898888877 PP == domain 6 score: 9.3 bits; conditional E-value: 0.033 EEEEESS.SS..EEEEE.EETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGH.ss..vtsla.fspdgawlasGsdDgtvriW 37 ++ ++GH ++ v ++ + p + + +sGsd g++ +W tr|C3XZJ2|C3XZJ2_BRAFL 507 IKRFRGHrNNatVKGVNfYGPQSEMXVSGSDCGHIFLW 544 5779***96679****766666666789********** PP == domain 7 score: 17.4 bits; conditional E-value: 9.2e-05 EEESS.SS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 6 tltGH.ss.vtslafspdgawlasGsdDgtvriW 37 l+G ++ v++l +p +a la+++ D+ v+iW tr|C3XZJ2|C3XZJ2_BRAFL 554 FLEGDdGGvVNCLEPHPCSAVLATSGLDHDVKIW 587 5677744567*************9999******* PP >> tr|C3Y1J1|C3Y1J1_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_174385 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 8.3 0.0 0.068 7.1 16 32 .. 188 204 .. 166 206 .. 0.87 2 ! 11.6 0.0 0.0063 0.65 10 37 .. 267 296 .. 262 296 .. 0.78 3 ! 20.2 0.0 1.2e-05 0.0013 1 38 [] 305 343 .. 305 343 .. 0.92 4 ? 3.3 0.0 2.6 2.7e+02 13 36 .. 374 397 .. 358 399 .. 0.78 5 ? 8.4 0.0 0.064 6.7 19 38 .] 424 443 .. 406 443 .. 0.85 6 ? 5.5 0.1 0.55 57 8 32 .. 454 482 .. 447 483 .. 0.73 Alignments for each domain: == domain 1 score: 8.3 bits; conditional E-value: 0.068 EEEETTSSEEEEEETTS CS WD40 16 lafspdgawlasGsdDg 32 ++fsp+g++la+G+ D+ tr|C3Y1J1|C3Y1J1_BRAFL 188 VRFSPNGRMLACGCADK 204 45***********9886 PP == domain 2 score: 11.6 bits; conditional E-value: 0.0063 S.SSEEEEEEETTSSE.EEEEETTSEEEEE CS WD40 10 H.ssvtslafspdgaw.lasGsdDgtvriW 37 H s+v+ +a +p ++ +++G++D+ +r+W tr|C3Y1J1|C3Y1J1_BRAFL 267 HpSFVYTVACHPVQPGiIVTGGYDHVIRVW 296 76778888777777773569********** PP == domain 3 score: 20.2 bits; conditional E-value: 1.2e-05 TEEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 gq+l++ +GH++ v+sl+f++dg ++s++ g v iW+ tr|C3Y1J1|C3Y1J1_BRAFL 305 GQLLKEMEGHQGlVNSLCFDRDGIRMFSADSEGVVIIWN 343 68999*****667***************966*******8 PP == domain 4 score: 3.3 bits; conditional E-value: 2.6 EEEEEEETTSSEEEE.EETTSEEEE CS WD40 13 vtslafspdgawlas.GsdDgtvri 36 +++++ ++ g+ l+ G +D+tvr+ tr|C3Y1J1|C3Y1J1_BRAFL 374 INCIQLHHGGRRLLVhG-RDNTVRL 397 89**9999999988324.5****97 PP == domain 5 score: 8.4 bits; conditional E-value: 0.064 ETTSSEEEEEETTSEEEEEE CS WD40 19 spdgawlasGsdDgtvriWd 38 p g+++++Gs+D ++W+ tr|C3Y1J1|C3Y1J1_BRAFL 424 TPCGSFVIAGSEDSCAYVWN 443 7999***************8 PP == domain 6 score: 5.5 bits; conditional E-value: 0.55 E..SS.SSEEEEEEETTSSEEE.EE.ETTS CS WD40 8 t..GH.ssvtslafspdgawla.sG.sdDg 32 + G + v++l+f+p+ +++a ++ + D+ tr|C3Y1J1|C3Y1J1_BRAFL 454 RelGYqNTVCGLDFHPHDHMVAfCCyG-DN 482 44466677************9867744.65 PP >> tr|C3ZWE3|C3ZWE3_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_102222 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.8 0.0 0.011 1.2 10 38 .] 453 481 .. 445 481 .. 0.83 2 ? 7.5 0.0 0.13 13 12 38 .] 502 528 .. 491 528 .. 0.90 3 ! 12.9 0.2 0.0024 0.25 14 38 .] 548 572 .. 538 572 .. 0.85 4 ! 16.1 1.3 0.00024 0.025 3 38 .] 578 614 .. 576 614 .. 0.88 5 ? 5.9 0.0 0.4 42 7 31 .. 621 648 .. 616 653 .. 0.74 6 ? 8.2 0.1 0.073 7.6 10 37 .. 667 695 .. 660 696 .. 0.85 7 ? 9.4 0.1 0.031 3.2 11 33 .. 710 732 .. 702 737 .. 0.83 Alignments for each domain: == domain 1 score: 10.8 bits; conditional E-value: 0.011 SSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 Hss.vtslafspdgawlasGsdDgtvriWd 38 H+ v+++ s + + +G+ +g v++Wd tr|C3ZWE3|C3ZWE3_BRAFL 453 HGEvVCAVTISNPPRHIYTGG-KGCVKVWD 481 755579999999999999***.*******9 PP == domain 2 score: 7.5 bits; conditional E-value: 0.13 SEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriWd 38 ++s++ pdg+ l+ G++ t+ iWd tr|C3ZWE3|C3ZWE3_BRAFL 502 YIRSCKLLPDGRTLLVGGEASTLSIWD 528 49999*********************9 PP == domain 3 score: 12.9 bits; conditional E-value: 0.0024 EEEEEETTSSEEEEEETTSEEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriWd 38 ++la spd++ +s++ Dg++ +Wd tr|C3ZWE3|C3ZWE3_BRAFL 548 YALAISPDSKVCFSCCSDGNIAVWD 572 6899*******887755*******9 PP == domain 4 score: 16.1 bits; conditional E-value: 0.00024 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++r + GH ++ ++++ s+dg+ l +G+ D+tvr Wd tr|C3ZWE3|C3ZWE3_BRAFL 578 LVRQFQGHtDGASCIDISHDGTKLWTGGLDNTVRSWD 614 6899****77799***9999999747999*******9 PP == domain 5 score: 5.9 bits; conditional E-value: 0.4 EESS..SS.EEEEEEETTSSEEEEEETT CS WD40 7 ltGH..ss.vtslafspdgawlasGsdD 31 l H +s + sl ++p g wla G++ tr|C3ZWE3|C3ZWE3_BRAFL 621 LQQHdfTSqIFSLGYCPTGEWLAVGMES 648 556753226**************99755 PP == domain 6 score: 8.2 bits; conditional E-value: 0.073 S.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvriW 37 H s+v sl+f g+w++s ++D+ + W tr|C3ZWE3|C3ZWE3_BRAFL 667 HeSCVLSLKFAYCGKWFVSTGKDNLLNAW 695 7778**************99999987766 PP == domain 7 score: 9.4 bits; conditional E-value: 0.031 SSEEEEEEETTSSEEEEEETTSE CS WD40 11 ssvtslafspdgawlasGsdDgt 33 ssv +++ s d +++++Gs D++ tr|C3ZWE3|C3ZWE3_BRAFL 710 SSVLCCDISADDKYIVTGSGDRK 732 4699**************88987 PP >> tr|C3Y4G7|C3Y4G7_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_125616 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.9 0.0 1.7 1.7e+02 18 37 .. 26 44 .. 12 45 .. 0.84 2 ! 29.2 0.0 1.7e-08 1.8e-06 1 38 [] 49 88 .. 49 88 .. 0.90 3 ! 12.4 0.0 0.0036 0.37 14 37 .. 199 222 .. 186 223 .. 0.91 4 ? 6.3 0.0 0.3 31 24 37 .. 392 408 .. 367 409 .. 0.66 5 ? 2.7 0.2 4.1 4.3e+02 16 38 .] 439 460 .. 422 460 .. 0.85 Alignments for each domain: == domain 1 score: 3.9 bits; conditional E-value: 1.7 EETTSSEEEEEETTSEEEEE CS WD40 18 fspdgawlasGsdDgtvriW 37 fspd++++++++ v+++ tr|C3Y4G7|C3Y4G7_BRAFL 26 FSPDSRYVLCCC-GYVVKVF 44 9********998.8888775 PP == domain 2 score: 29.2 bits; conditional E-value: 1.7e-08 TEEEEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 g+c+r+l GH +++t+++ +p++++ +++s D+tv++Wd tr|C3Y4G7|C3Y4G7_BRAFL 49 GECVRELAGHkDFITGVKINPHNQFqAFTSSLDKTVKVWD 88 68********666************7448899*******9 PP == domain 3 score: 12.4 bits; conditional E-value: 0.0036 EEEEEETTSSEEEEEETTSEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriW 37 +++a +p a +a+G+ Dg++ +W tr|C3Y4G7|C3Y4G7_BRAFL 199 RCVACHPTDACIATGMQDGKIFLW 222 79********************** PP == domain 4 score: 6.3 bits; conditional E-value: 0.3 E...EEEEETTSEEEEE CS WD40 24 w...lasGsdDgtvriW 37 + +s++dDg+ +iW tr|C3Y4G7|C3Y4G7_BRAFL 392 LpptAVSAGDDGKFKIW 408 2555456777******* PP == domain 5 score: 2.7 bits; conditional E-value: 4.1 EEEETTSSEEEEEETTSEEEEEE CS WD40 16 lafspdgawlasGsdDgtvriWd 38 afs dg++la + +++ iWd tr|C3Y4G7|C3Y4G7_BRAFL 439 AAFSEDGSLLAVAF-GQSLTIWD 460 46*********999.*******8 PP >> tr|C3YIF0|C3YIF0_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_119430 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 13.2 0.7 0.002 0.21 9 38 .] 236 264 .. 226 264 .. 0.86 2 ? 8.0 0.0 0.083 8.6 3 34 .. 270 300 .. 268 304 .. 0.75 3 ! 19.2 0.0 2.5e-05 0.0026 5 32 .. 314 342 .. 311 346 .. 0.87 4 ! 17.4 0.0 9e-05 0.0093 4 38 .] 664 699 .. 661 699 .. 0.89 Alignments for each domain: == domain 1 score: 13.2 bits; conditional E-value: 0.002 SSSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GHssvtslafspdgawlasGsdDgtvriWd 38 G svts+ ++ g+++a G+ +g v +Wd tr|C3YIF0|C3YIF0_BRAFL 236 GD-SVTSVNWNERGNLVAVGTHKGYVQVWD 264 43.7****************88*******9 PP == domain 2 score: 8.0 bits; conditional E-value: 0.083 EEEEEESS.SSEEEEEEETTSSE....EEEEETTSEE CS WD40 3 clrtltGH.ssvtslafspdgaw....lasGsdDgtv 34 + l+GH v +l aw l+sGs+D+ + tr|C3YIF0|C3YIF0_BRAFL 270 RISMLEGHsARVGAL------AWnadiLSSGSRDRLI 300 567799**555****......555554999****977 PP == domain 3 score: 19.2 bits; conditional E-value: 2.5e-05 EEEESS.SSEEEEEEETTSSEEEEEETTS CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDg 32 r l GH + v++l++spd++ lasG+ D+ tr|C3YIF0|C3YIF0_BRAFL 314 RRLAGHrQEVCGLKWSPDHQHLASGGNDN 342 6688**999****************9775 PP == domain 4 score: 17.4 bits; conditional E-value: 9e-05 EEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 + +ltGHs v la spdg +++G D t+r+W+ tr|C3YIF0|C3YIF0_BRAFL 664 VAKLTGHSYrVLYLAMSPDGEAIVTGAGDETLRFWN 699 6689***558****************66*******8 PP >> tr|C3XUG3|C3XUG3_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_120976 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 14.8 0.0 0.0006 0.063 10 38 .] 285 314 .. 277 314 .. 0.80 2 ! 26.6 0.1 1.1e-07 1.2e-05 5 38 .] 321 355 .. 317 355 .. 0.91 3 ? 5.7 0.0 0.46 47 18 37 .. 591 609 .. 553 610 .. 0.70 4 ! 16.3 0.4 0.0002 0.021 10 38 .] 674 703 .. 667 703 .. 0.92 Alignments for each domain: == domain 1 score: 14.8 bits; conditional E-value: 0.0006 S.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 10 H.ssvtsla.fspdgawlasGsdDgtvriWd 38 H ++tsl f+p ++++ ++s+Dg+v++Wd tr|C3XUG3|C3XUG3_BRAFL 285 HaRNITSLLfFNPLKNLI-TASKDGSVKVWD 314 533499999666666765.79*********9 PP == domain 2 score: 26.6 bits; conditional E-value: 1.1e-07 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++ GH + +t+l + p+g++++s+s D+t+r+W+ tr|C3XUG3|C3XUG3_BRAFL 321 MVFVGHtGAITDLVVYPYGPFIISASQDCTIRVWS 355 5789**777*************************5 PP == domain 3 score: 5.7 bits; conditional E-value: 0.46 EETTSSEEEEEETTSEEEEE CS WD40 18 fspdgawlasGsdDgtvriW 37 + ++++ + s+++D+ v++W tr|C3XUG3|C3XUG3_BRAFL 591 NYKENQII-SAGRDNVVKVW 609 44445555.6777******* PP == domain 4 score: 16.3 bits; conditional E-value: 0.0002 S.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvriWd 38 H +++t+la +p + +as+s Dgtv+iW+ tr|C3XUG3|C3XUG3_BRAFL 674 HiDDITALACCPRMKVFASSSLDGTVKIWN 703 8889*************************8 PP >> tr|C3YV44|C3YV44_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_205575 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 27.9 0.0 4.6e-08 4.8e-06 2 37 .. 50 86 .. 49 87 .. 0.90 2 ? 4.7 0.0 0.93 97 7 31 .. 96 121 .. 89 125 .. 0.77 3 ? 7.0 0.0 0.18 19 8 35 .. 133 163 .. 127 166 .. 0.73 4 ? 7.1 0.0 0.17 17 14 37 .. 231 254 .. 222 255 .. 0.92 5 ? 9.3 0.0 0.034 3.5 9 34 .. 266 292 .. 258 295 .. 0.83 6 ? 1.5 0.0 9.9 1e+03 11 38 .] 462 489 .. 454 489 .. 0.85 Alignments for each domain: == domain 1 score: 27.9 bits; conditional E-value: 4.6e-08 EEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGHss.vtslafspdgawlasGsdDgtvriW 37 ++++ l+GH++ v+++a+ +dg+ +asGs D++v iW tr|C3YV44|C3YV44_BRAFL 50 TLIQPLKGHKDtVYCVAYAKDGKRFASGSADKSVIIW 86 578899***555************************* PP == domain 2 score: 4.7 bits; conditional E-value: 0.93 EESS.SSEEEEEEETTSSEEEEE.ETT CS WD40 7 ltGH.ssvtslafspdgawlasG.sdD 31 + +H +++ +++++p + las+ s D tr|C3YV44|C3YV44_BRAFL 96 Y-THnDPIQCVSYNPVTHQLASCtSSD 121 3.69566*******99999*9985335 PP == domain 3 score: 7.0 bits; conditional E-value: 0.18 ESS.SS..EEEEEEETTSSEEEEEETTSEEE CS WD40 8 tGH.ss..vtslafspdgawlasGsdDgtvr 35 H + +t++++ dg++la G ++g + tr|C3YV44|C3YV44_BRAFL 133 NKHkVGikITCCSWTNDGQYLALGLYNGCIS 163 557544679***********97675577665 PP == domain 4 score: 7.1 bits; conditional E-value: 0.17 EEEEEETTSSEEEEEETTSEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriW 37 +++++ + g +l++G+ D+ v ++ tr|C3YV44|C3YV44_BRAFL 231 CCVSYFSRGEYLVCGGADKQVSLY 254 79******************9886 PP == domain 5 score: 9.3 bits; conditional E-value: 0.034 SS.SSEEEEEEETTSSEEEEEETTSEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtv 34 + s+v+ +++ pd++++a G+ Dgt+ tr|C3YV44|C3YV44_BRAFL 266 EQqSWVWTCRVRPDQNFVAIGCQDGTI 292 44477*********************8 PP == domain 6 score: 1.5 bits; conditional E-value: 9.9 SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriWd 38 +s+++l+ s++ + la ++++t+ ++d tr|C3YV44|C3YV44_BRAFL 462 TSIRCLDMSSSRNKLAVVDENNTCLVYD 489 67*****999999999889999999998 PP >> tr|C3YDV4|C3YDV4_BRAFL Coronin OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_61519 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.8 0.1 1.9e-06 0.00019 8 37 .. 77 108 .. 72 108 .. 0.86 2 ! 17.7 0.0 7.6e-05 0.008 2 38 .] 121 159 .. 120 159 .. 0.85 3 ! 19.2 0.0 2.4e-05 0.0025 2 38 .] 164 201 .. 163 201 .. 0.89 Alignments for each domain: == domain 1 score: 22.8 bits; conditional E-value: 1.9e-06 ESS.SSEEEEEEETTSSEE.EEEETTSEEEEE CS WD40 8 tGH.ssvtslafspdgawl.asGsdDgtvriW 37 GH + v +++++p ++ + as+s+D +vriW tr|C3YDV4|C3YDV4_BRAFL 77 IGHqGAVLDVKWNPFNDNViASCSEDTSVRIW 108 69*777************72589********* PP == domain 2 score: 17.7 bits; conditional E-value: 7.6e-05 EEEEEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 ++l +l GH vt + ++p ++ s+ +D+++ +W+ tr|C3YDV4|C3YDV4_BRAFL 121 EPLMSLYGHhRRVTNILWHPTAENILlSSAYDHKILVWN 159 6899999**555************6448877*******8 PP == domain 3 score: 19.2 bits; conditional E-value: 2.4e-05 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 q ++++t H + ++s+af+ dg++la+ ++D+ +r+ d tr|C3YDV4|C3YDV4_BRAFL 164 QAVTIITCHtDTIYSMAFNTDGSLLATTCKDRRLRVID 201 6788999**666**************999******965 PP >> tr|C3Y8Z9|C3Y8Z9_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_57357 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 8.3 0.1 0.071 7.4 5 35 .. 150 182 .. 147 183 .. 0.76 2 ! 29.5 1.5 1.4e-08 1.4e-06 4 37 .. 194 228 .. 191 229 .. 0.93 3 ? 3.4 0.0 2.5 2.6e+02 4 17 .. 330 342 .. 327 363 .. 0.79 4 ? 4.4 0.0 1.1 1.2e+02 21 38 .] 404 421 .. 387 421 .. 0.84 5 ! 13.5 0.0 0.0016 0.17 5 38 .] 431 465 .. 428 465 .. 0.87 Alignments for each domain: == domain 1 score: 8.3 bits; conditional E-value: 0.071 EEEESS.SSEEEEE.EETTSSEEEEEETTSEEE CS WD40 5 rtltGH.ssvtsla.fspdgawlasGsdDgtvr 35 ++++ H v +++ ++d+a la++s Dgt+ tr|C3Y8Z9|C3Y8Z9_BRAFL 150 HIFDQHsEAVMAVKfANDDKARLACCSLDGTLS 182 679999555****955555555999******86 PP == domain 2 score: 29.5 bits; conditional E-value: 1.4e-08 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 l +l+GH s+vt++++s +++ ++s+s Dgtvr+W tr|C3Y8Z9|C3Y8Z9_BRAFL 194 LCVLKGHtSGVTDFSWSLSNDVIVSCSLDGTVRLW 228 6689***888************************* PP == domain 3 score: 3.4 bits; conditional E-value: 2.5 EEEEESSSSEEEEE CS WD40 4 lrtltGHssvtsla 17 l +++GH ++t+++ tr|C3Y8Z9|C3Y8Z9_BRAFL 330 LVVCEGH-PITCIS 342 56789**.*****4 PP == domain 4 score: 4.4 bits; conditional E-value: 1.1 TSSEEEEEETTSEEEEEE CS WD40 21 dgawlasGsdDgtvriWd 38 ga ++sGs+D +v+++d tr|C3Y8Z9|C3Y8Z9_BRAFL 404 QGACVVSGSEDMSVYFFD 421 577799********9987 PP == domain 5 score: 13.5 bits; conditional E-value: 0.0016 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +l GH +v +++f+ d ++las++ g v +W+ tr|C3Y8Z9|C3Y8Z9_BRAFL 431 NKLQGHsAPVIDVSFNYDESLLASADSEGMVIVWK 465 5689**77788************9966*******6 PP >> tr|C3ZDE1|C3ZDE1_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_206753 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 21.9 0.4 3.5e-06 0.00037 10 38 .] 11 40 .. 5 40 .. 0.91 2 ! 13.8 1.7 0.0013 0.13 1 37 [. 47 86 .. 47 87 .. 0.86 3 ? 10.3 0.0 0.016 1.6 12 37 .. 116 143 .. 100 144 .. 0.77 4 ? 3.5 0.1 2.3 2.4e+02 13 32 .. 166 188 .. 152 189 .. 0.72 5 ! 23.5 0.5 1.1e-06 0.00011 7 38 .] 273 305 .. 268 305 .. 0.89 Alignments for each domain: == domain 1 score: 21.9 bits; conditional E-value: 3.5e-06 SSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 Hss.vtslafspdgawlasGsdDgtvriWd 38 H++ +++++++ +g+ +a++s D+t+++Wd tr|C3ZDE1|C3ZDE1_BRAFL 11 HKDlIHDVSYDFHGRRMATCSSDQTIKVWD 40 88889***************88*******9 PP == domain 2 score: 13.8 bits; conditional E-value: 0.0013 TEEEEEEESS.SSEEEEEEETTSSE........EEEEETTSEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgaw........lasGsdDgtvriW 37 +qc+ ++++H +sv+ + +w las+s D+t +W tr|C3ZDE1|C3ZDE1_BRAFL 47 WQCTASWKTHsGSVWKV------TWahpefgqvLASCSFDRTAAVW 86 79********777****......777777777799********999 PP == domain 3 score: 10.3 bits; conditional E-value: 0.016 SEEEEEEETTSSE..EEEEETTSEEEEE CS WD40 12 svtslafspdgaw..lasGsdDgtvriW 37 svt+++f p + la++s Dg vri+ tr|C3ZDE1|C3ZDE1_BRAFL 116 SVTDVKFGPKHMGlqLATCSADGVVRIY 143 5999965444444668***********8 PP == domain 4 score: 3.5 bits; conditional E-value: 2.3 EEEEEEETTSSE...EEEEETTS CS WD40 13 vtslafspdgaw...lasGsdDg 32 ++l+++p+ la GsdD tr|C3ZDE1|C3ZDE1_BRAFL 166 CSCLSWNPSRLHlpmLAVGSDDT 188 47999999999977669999774 PP == domain 5 score: 23.5 bits; conditional E-value: 1.1e-06 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++ H s v+ ++++ g+ las++dDg vr+W+ tr|C3ZDE1|C3ZDE1_BRAFL 273 FDEHsSQVWRVSWNITGTVLASSGDDGCVRLWK 305 778*566**************999********6 PP >> tr|C3YJB0|C3YJB0_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_60509 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 19.9 0.0 1.5e-05 0.0016 5 38 .] 99 134 .. 95 134 .. 0.86 2 ! 11.2 0.0 0.0084 0.88 7 38 .] 144 179 .. 139 179 .. 0.84 3 ! 24.1 0.1 7.1e-07 7.4e-05 5 37 .. 188 222 .. 185 223 .. 0.81 4 ? 7.9 0.1 0.091 9.5 12 38 .] 241 270 .. 228 270 .. 0.69 5 ? 8.5 0.0 0.059 6.1 7 35 .. 281 310 .. 276 311 .. 0.87 Alignments for each domain: == domain 1 score: 19.9 bits; conditional E-value: 1.5e-05 EEEESSSS.EEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 5 rtltGHss.vtslafspdgawla.sGsdDgtvriWd 38 +++t H+ v+ ++f+p ++ sGs Dgtv+++d tr|C3YJB0|C3YJB0_BRAFL 99 QVFTEHKRtVNKVCFHPTELHVLlSGSQDGTVKLFD 134 6899**556************644**********98 PP == domain 2 score: 11.2 bits; conditional E-value: 0.0084 EESS.SSEEEEEEETTSSE...EEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgaw...lasGsdDgtvriWd 38 + G sv++++f+p+ ++ +as +++g+v +Wd tr|C3YJB0|C3YJB0_BRAFL 144 FHGRsESVRDVQFNPHRDYyfsFASTHENGNVLLWD 179 4444445************9998999*********9 PP == domain 3 score: 24.1 bits; conditional E-value: 7.1e-07 EEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgaw.lasGsdDgtvriW 37 r +t+H ++v +++f+pd + la++++D+ +++W tr|C3YJB0|C3YJB0_BRAFL 188 RFFTAHsGPVFCCDFHPDDKSwLATAGRDKAIKVW 222 6699**777*****55555555************* PP == domain 4 score: 7.9 bits; conditional E-value: 0.091 SEEEEEEETTSSE.EEEEE..TTSEEEEEE CS WD40 12 svtslafspdgaw.lasGs..dDgtvriWd 38 sv +++ p ++ +as+s D ++ iWd tr|C3YJB0|C3YJB0_BRAFL 241 SVGRIKWRPQRRYhIASCSllVDFSINIWD 270 3556669999999445777666*******9 PP == domain 5 score: 8.5 bits; conditional E-value: 0.059 EESSSSE.EEEEEETTSSEEEEEETTSEEE CS WD40 7 ltGHssv.tslafspdgawlasGsdDgtvr 35 ++ H +v t++ + +d + ++s+s+D+tv+ tr|C3YJB0|C3YJB0_BRAFL 281 FEEHRDVtTGITWRQDPHIFLSCSKDCTVY 310 678978999**99999999*********96 PP >> tr|C3ZUB0|C3ZUB0_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_227653 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 12.1 0.0 0.0044 0.46 12 37 .. 95 120 .. 85 121 .. 0.86 2 ? 2.7 0.1 4.2 4.3e+02 15 38 .] 188 214 .. 173 214 .. 0.65 3 ? 5.8 0.0 0.42 44 7 38 .] 227 259 .. 221 259 .. 0.75 4 ! 28.5 0.0 2.8e-08 2.9e-06 2 37 .. 264 300 .. 263 300 .. 0.95 5 ? 5.5 0.0 0.52 55 12 35 .. 327 349 .. 309 350 .. 0.80 Alignments for each domain: == domain 1 score: 12.1 bits; conditional E-value: 0.0044 SEEEEEEETTSSEEEEEETTSEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriW 37 +v+ +a +p ++ ++G+ Dg+vr+W tr|C3ZUB0|C3ZUB0_BRAFL 95 GVRRMASHPTLPYYLTGCQDGSVRMW 120 5888889999999789********** PP == domain 2 score: 2.7 bits; conditional E-value: 4.2 EEEEETTSSEEEEE...ETTSEEEEEE CS WD40 15 slafspdgawlasG...sdDgtvriWd 38 ++ f ++++l+++ s+ ++v +Wd tr|C3ZUB0|C3ZUB0_BRAFL 188 DFVFINSSSFLSTAghsSEHRNVCLWD 214 44466677899864244579******9 PP == domain 3 score: 5.8 bits; conditional E-value: 0.42 EESS.SS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ss.vtslafspdgawlasGsdDgtvriWd 38 +t H s+ ++ + p +++l+s++++g + i+d tr|C3ZUB0|C3ZUB0_BRAFL 227 FTCHeSGsP-AIVYAPQQQLLISSGRKGDICIFD 259 666653333.5667889999**9999******98 PP == domain 4 score: 28.5 bits; conditional E-value: 2.8e-08 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 q+ +t+ +H s v +la +p ++++Gs Dg v++W tr|C3ZUB0|C3ZUB0_BRAFL 264 QLRHTFQAHeSAVKCLALDPTEEFFVTGSVDGEVKVW 300 7789*****888************************* PP == domain 5 score: 5.5 bits; conditional E-value: 0.52 SEEEEEEETTSSEEEEEETTSEEE CS WD40 12 svtslafspdgawlasGsdDgtvr 35 +vt l p ++++++G Dgt++ tr|C3ZUB0|C3ZUB0_BRAFL 327 GVTQLHLGPTNHMFSCGA-DGTLK 349 589998999999987666.***98 PP >> tr|C3ZTK9|C3ZTK9_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_87624 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 21.3 0.6 5.5e-06 0.00057 8 38 .] 338 369 .. 333 369 .. 0.90 2 ? 2.5 0.0 4.7 4.9e+02 13 38 .] 386 412 .. 379 412 .. 0.67 3 ! 14.0 0.0 0.0011 0.11 14 38 .] 482 506 .. 474 506 .. 0.87 4 ? 7.9 0.1 0.094 9.8 2 34 .. 511 544 .. 510 548 .. 0.80 5 ! 13.9 0.2 0.0012 0.12 4 36 .. 618 653 .. 615 653 .. 0.82 Alignments for each domain: == domain 1 score: 21.3 bits; conditional E-value: 5.5e-06 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 H ss+t+++fs +g+ +as++ Dg v++W+ tr|C3ZTK9|C3ZTK9_BRAFL 338 IEHhSSITHCRFSVSGTCIASADIDGVVKVWN 369 456699**************9999*******8 PP == domain 2 score: 2.5 bits; conditional E-value: 4.7 EEEEEEETTSSE........EEEEETTSEEEEEE CS WD40 13 vtslafspdgaw........lasGsdDgtvriWd 38 + sl w l+ Gs+ tvr++d tr|C3ZTK9|C3ZTK9_BRAFL 386 IQSL------EWvtkpsrllLL-GSRQSTVRLYD 412 6667......553333333255.*********98 PP == domain 3 score: 14.0 bits; conditional E-value: 0.0011 EEEEEETTSSEEEEEETTSEEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriWd 38 ++ af +g++l+sG Dg +r++d tr|C3ZTK9|C3ZTK9_BRAFL 482 NCTAFTFNGHLLVSGASDGVIRLYD 506 6888***********66******98 PP == domain 4 score: 7.9 bits; conditional E-value: 0.094 EEEEEEESS.SSEEEEEEETTSSEEEE.EETTSEE CS WD40 2 qclrtltGH.ssvtslafspdgawlas.GsdDgtv 34 +cl ++ +H + v+s++fs d + ++s G Dg+ tr|C3ZTK9|C3ZTK9_BRAFL 511 DCLMSWQAHsGEVYSVQFSCDETSIFSmGA-DGKF 544 699******555*********999986455.8875 PP == domain 5 score: 13.9 bits; conditional E-value: 0.0012 EEEEESS.SSEEEEEEETTSSE........EEEEETTSEEEE CS WD40 4 lrtltGH.ssvtslafspdgaw........lasGsdDgtvri 36 + +l GH s+v s+ +w ++Gs+Dg++++ tr|C3ZTK9|C3ZTK9_BRAFL 618 TLSLGGHrSPVVSV------DWctamncgtCVTGSMDGKIKV 653 56789**99999**......8877777787668*******97 PP >> tr|C3XVS3|C3XVS3_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_83119 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 39.4 0.1 1.1e-11 1.1e-09 2 38 .] 93 130 .. 92 130 .. 0.91 2 ! 18.6 0.0 3.9e-05 0.004 3 30 .. 136 164 .. 134 171 .. 0.86 Alignments for each domain: == domain 1 score: 39.4 bits; conditional E-value: 1.1e-11 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +c+ t++GH v s+afsp+g++lasGs D tvr+Wd tr|C3XVS3|C3XVS3_BRAFL 93 RCTSTIEGHsEAVISVAFSPSGRFLASGSGDTTVRFWD 130 6999*****54488**************99*******9 PP == domain 2 score: 18.6 bits; conditional E-value: 3.9e-05 EEEEEESSSS.EEEEEEETTSSEEEEEET CS WD40 3 clrtltGHss.vtslafspdgawlasGsd 30 + t++GHs+ + +la+ pdg+ lasG++ tr|C3XVS3|C3XVS3_BRAFL 136 PKFTCKGHSHwILALAWAPDGRKLASGCK 164 667999**667****************94 PP >> tr|C3YX50|C3YX50_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_183919 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.8 1.1 0.00014 0.015 6 36 .. 10 41 .. 5 43 .. 0.85 2 ? 4.5 0.1 1.1 1.1e+02 8 34 .. 81 110 .. 73 112 .. 0.80 3 ? 7.3 0.0 0.15 15 19 38 .] 140 159 .. 123 159 .. 0.74 4 ! 11.9 0.0 0.005 0.52 8 38 .] 178 209 .. 172 209 .. 0.84 5 ? 9.5 0.1 0.028 3 6 38 .] 608 643 .. 605 643 .. 0.70 6 ! 12.4 0.0 0.0035 0.37 11 37 .. 657 684 .. 647 685 .. 0.84 Alignments for each domain: == domain 1 score: 16.8 bits; conditional E-value: 0.00014 EEESS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvri 36 +l H ++v+s+ +s+dg ++sGsdD ++ i tr|C3YX50|C3YX50_BRAFL 10 KLPVHtGCVNSIWWSDDGEHILSGSDDTNLCI 41 37789777*****************9999877 PP == domain 2 score: 4.5 bits; conditional E-value: 1.1 ESS.SSEEEEEEETTSSE..EEEEETTSEE CS WD40 8 tGH.ssvtslafspdgaw..lasGsdDgtv 34 +GH ++ s +f p++ + ++s+s Dg + tr|C3YX50|C3YX50_BRAFL 81 SGHrANIFSAKFMPHSGLgrVVSCSGDGIL 110 5**888*****999999999888877*986 PP == domain 3 score: 7.3 bits; conditional E-value: 0.15 ETTSSEEEEEETTSEEEEEE CS WD40 19 spdgawlasGsdDgtvriWd 38 ++d + ++s+++Dgtvr +d tr|C3YX50|C3YX50_BRAFL 140 DSDPNTFLSCGEDGTVRWFD 159 566666778999*****776 PP == domain 4 score: 11.9 bits; conditional E-value: 0.005 ESSSSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 8 tGHssvtslafspdgaw.lasGsdDgtvriWd 38 ++H vt++a +p+ ++ la G+ D +vr++d tr|C3YX50|C3YX50_BRAFL 178 KAHRAVTAIAANPHTPYhLAVGCSDSSVRLFD 209 68966************5467766******98 PP == domain 5 score: 9.5 bits; conditional E-value: 0.028 EEESS.SS...EEEEE..EETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ss...vtsla..fspdgawlasGsdDgtvriWd 38 +++GH + + + + ++++sGsd g+v iWd tr|C3YX50|C3YX50_BRAFL 608 IYKGHrNArtmI---KesNFFGTQYVISGSDCGHVFIWD 643 577776555554...122455668899***********9 PP == domain 6 score: 12.4 bits; conditional E-value: 0.0035 SS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 11 ss.vtslafspdgawlasGsdDgtvriW 37 ++ v++++ +p + la+++ D v++W tr|C3YX50|C3YX50_BRAFL 657 KHvVNCVQPHPRYPVLATSGIDYDVKLW 684 5546************************ PP >> tr|C3YV92|C3YV92_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_119335 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 25.9 0.0 1.8e-07 1.9e-05 4 38 .] 63 98 .. 60 98 .. 0.91 2 ? 6.5 0.0 0.25 26 13 34 .. 160 180 .. 146 183 .. 0.82 3 ! 18.9 0.0 3.1e-05 0.0032 2 38 .] 190 230 .. 189 230 .. 0.85 Alignments for each domain: == domain 1 score: 25.9 bits; conditional E-value: 1.8e-07 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +r + GH + v +l+ sp + ++sGs D+t+r+Wd tr|C3YV92|C3YV92_BRAFL 63 IRYFPGHtKKVVALCMSPIDDTFMSGSLDKTIRLWD 98 67799**88899***********************9 PP == domain 2 score: 6.5 bits; conditional E-value: 0.25 EEEEEEETTSSEEEEEETTSEE CS WD40 13 vtslafspdgawlasGsdDgtv 34 t+l+fs dg++++ ++ +gtv tr|C3YV92|C3YV92_BRAFL 160 WTGLKFSNDGKLILIST-NGTV 180 699*********99988.8887 PP == domain 3 score: 18.9 bits; conditional E-value: 3.1e-05 EEEEEEESSSSEEEEE....EETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGHssvtsla....fspdgawlasGsdDgtvriWd 38 ++l+ + GH++ +l+ f pd+++ + Gs Dg++++W+ tr|C3YV92|C3YV92_BRAFL 190 TPLQQFMGHTNLKGLSieasFTPDSRYTIVGSQDGKIHVWN 230 6788899**77777778888*******667**********8 PP >> tr|C3ZBE0|C3ZBE0_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_275517 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 13.7 0.0 0.0014 0.14 9 38 .] 235 266 .. 226 266 .. 0.84 2 ! 12.2 0.0 0.0041 0.42 1 38 [] 270 309 .. 270 309 .. 0.88 3 ! 20.1 0.1 1.3e-05 0.0013 2 38 .] 357 395 .. 356 395 .. 0.78 4 ? 8.5 0.0 0.06 6.3 13 38 .] 414 440 .. 408 440 .. 0.88 Alignments for each domain: == domain 1 score: 13.7 bits; conditional E-value: 0.0014 SS.SSEEEEEEETTSSE.......EEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgaw.......lasGsdDgtvriWd 38 GH + v +l +w las+s D+tv +Wd tr|C3ZBE0|C3ZBE0_BRAFL 235 GHtDAVLDL------SWnrlvrniLASASADRTVALWD 266 996669999......888888887899999*******9 PP == domain 2 score: 12.2 bits; conditional E-value: 0.0041 TEEEEEEESSSS.EEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 1 gqclrtltGHss.vtslafspdgaw.lasGsdDgtvriWd 38 g++++tl+ H++ v l ++p a l+sG+ D++ ++d tr|C3ZBE0|C3ZBE0_BRAFL 270 GKPVTTLSQHKDkVQTLEWHPFEAQsLLSGGFDKHAILYD 309 6899******666****999999999889*99**999887 PP == domain 3 score: 20.1 bits; conditional E-value: 1.3e-05 EEEEEEESS.SSEEEEE..EETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtsla..fspdgawlasGsdDgtvriWd 38 +++ tl++H + vt+l+ g +++++s D+t+++Wd tr|C3ZBE0|C3ZBE0_BRAFL 357 KPVFTLSAHpQAVTGLSlsSAVPGCLVTTSS-DKTLKVWD 395 6899*****888*988554555555577888.*******9 PP == domain 4 score: 8.5 bits; conditional E-value: 0.06 EEEEEEETTSSEEEE.EETTSEEEEEE CS WD40 13 vtslafspdgawlas.GsdDgtvriWd 38 t+ + +pd+++l++ G+++ ++r+W+ tr|C3ZBE0|C3ZBE0_BRAFL 414 LTCARSCPDSPFLFAmGGEKDSLRVWS 440 689999******9755999*******5 PP >> tr|C3YGN3|C3YGN3_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_122323 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.0 0.1 0.00012 0.013 8 37 .. 14 40 .. 8 41 .. 0.84 2 ? 7.0 0.0 0.17 18 12 36 .. 96 120 .. 63 120 .. 0.86 3 ! 25.0 0.1 3.6e-07 3.8e-05 5 38 .] 132 166 .. 128 166 .. 0.89 4 ! 17.2 0.2 0.00011 0.011 16 38 .] 238 260 .. 220 260 .. 0.82 Alignments for each domain: == domain 1 score: 17.0 bits; conditional E-value: 0.00012 ESSSSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 8 tGHssvtslafspdgawlasGsdDgtvriW 37 +GH t++++ ++g++l++++ Dg vr+W tr|C3YGN3|C3YGN3_BRAFL 14 EGH---TDICYGQEGRYLITCGTDGDVRVW 40 588...6777777******9999******* PP == domain 2 score: 7.0 bits; conditional E-value: 0.17 SEEEEEEETTSSEEEEEETTSEEEE CS WD40 12 svtslafspdgawlasGsdDgtvri 36 +v++l +s +g++la+G D ++r+ tr|C3YGN3|C3YGN3_BRAFL 96 PVSHLVYSESGKLLAAGASDFNIRV 120 499999***********66****97 PP == domain 3 score: 25.0 bits; conditional E-value: 3.6e-07 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + l GH +v s+a++p ++las+s Dgtv iW+ tr|C3YGN3|C3YGN3_BRAFL 132 YLLHGHqAPVLSVAVDPQDKYLASSSCDGTVAIWN 166 5578**888**************9988*******8 PP == domain 4 score: 17.2 bits; conditional E-value: 0.00011 EEEETTSSEEEEEETTSEEEEEE CS WD40 16 lafspdgawlasGsdDgtvriWd 38 +a+sp+g +la ++ Dgt+ +Wd tr|C3YGN3|C3YGN3_BRAFL 238 VAWSPNGVLLAGACVDGTILVWD 260 78********84478*******9 PP >> tr|C3YXD4|C3YXD4_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_122984 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 31.1 0.1 4.3e-09 4.5e-07 2 38 .] 179 217 .. 178 217 .. 0.91 2 ! 23.2 0.0 1.4e-06 0.00014 8 38 .] 231 262 .. 223 262 .. 0.91 3 ? 7.9 0.2 0.093 9.7 10 38 .] 404 436 .. 397 436 .. 0.72 Alignments for each domain: == domain 1 score: 31.1 bits; conditional E-value: 4.3e-09 EEEEEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 qc++++tGH sv+ l+f+p+++ ++ s s+D+++r+W+ tr|C3YXD4|C3YXD4_BRAFL 179 QCIKHYTGHgHSVNELKFHPSKPSIMlSVSKDHSLRLWN 217 8********556************85599*********8 PP == domain 2 score: 23.2 bits; conditional E-value: 1.4e-06 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 +GH + v s +f+ +g+ ++s+++D++++iW+ tr|C3YXD4|C3YXD4_BRAFL 231 EGHrDEVLSADFNAEGTRVVSCGMDHSLKIWN 262 6**888****************9********8 PP == domain 3 score: 7.9 bits; conditional E-value: 0.093 S.SS...EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 H.ss...vtslafspdgawlasGsdDgtvriWd 38 H ++ ++ + +dg++l+s +dDgt+ Wd tr|C3YXD4|C3YXD4_BRAFL 404 HpKCtsaIRQTSMTRDGNLLISVCDDGTLWRWD 436 553334575445599******9999***98887 PP >> tr|C3ZKX0|C3ZKX0_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_125541 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 6.7 0.1 0.23 24 18 38 .] 311 331 .. 278 331 .. 0.85 2 ! 18.7 0.0 3.5e-05 0.0036 1 38 [] 522 561 .. 522 561 .. 0.84 3 ? 4.6 0.0 1 1.1e+02 9 38 .] 596 624 .. 587 624 .. 0.76 4 ! 18.7 0.0 3.5e-05 0.0036 1 38 [] 1957 1996 .. 1957 1996 .. 0.84 5 ? 4.0 0.1 1.6 1.6e+02 10 38 .] 2009 2036 .. 2001 2036 .. 0.75 Alignments for each domain: == domain 1 score: 6.7 bits; conditional E-value: 0.23 EETTSSEEEEE.ETTSEEEEEE CS WD40 18 fspdgawlasG.sdDgtvriWd 38 +s+ g+ +++G s g vr+Wd tr|C3ZKX0|C3ZKX0_BRAFL 311 VSSCGTHIVAGfS-EGIVRLWD 331 5777999****55.*******9 PP == domain 2 score: 18.7 bits; conditional E-value: 3.5e-05 TEEEEEEESS.SSEEEEE..EETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtsla..fspdgawlasGsdDgtvriWd 38 g++l++l+GH + vt+++ +sp + + ++G +D+ vr++d tr|C3ZKX0|C3ZKX0_BRAFL 522 GKQLTSLRGHrGQVTCMDlrNSPPNML-VTGAEDKRVRVFD 561 67899*****888****8866666666.68*********98 PP == domain 3 score: 4.6 bits; conditional E-value: 1 SS.SSEEEEEEETTSSE....EEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgaw....lasGsdDgtvriWd 38 +H +v+++ ++ ++sG++ g + +Wd tr|C3ZKX0|C3ZKX0_BRAFL 596 AHpLGVSCV------QMddwkVVSGGREGALCVWD 624 674448888......55555888***********9 PP == domain 4 score: 18.7 bits; conditional E-value: 3.5e-05 TEEEEEEESS.SSEEEEE..EETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtsla..fspdgawlasGsdDgtvriWd 38 g++l++l+GH + vt+++ +sp + + ++G +D+ vr++d tr|C3ZKX0|C3ZKX0_BRAFL 1957 GKQLTSLRGHrGQVTCMDlrNSPPNML-VTGAEDKRVRVFD 1996 67899*****888****8866666666.68*********98 PP == domain 5 score: 4.0 bits; conditional E-value: 1.6 S.SSEEEEEEETTSSE....EEEEETTSEEEEEE CS WD40 10 H.ssvtslafspdgaw....lasGsdDgtvriWd 38 H +v+++ ++ ++sG++ g + +Wd tr|C3ZKX0|C3ZKX0_BRAFL 2009 HpLGVSCV------QMddwkVVSGGREGALCVWD 2036 63348888......44555888***********9 PP >> tr|C3ZLL9|C3ZLL9_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_86151 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.2 0.0 0.037 3.8 4 38 .] 609 644 .. 606 644 .. 0.83 2 ? 9.4 0.0 0.03 3.2 7 38 .] 658 690 .. 651 690 .. 0.87 3 ! 14.3 0.2 0.00086 0.09 5 38 .] 746 780 .. 738 780 .. 0.76 4 ! 11.8 0.0 0.0052 0.54 15 37 .. 840 862 .. 825 863 .. 0.84 5 ? 9.3 0.2 0.033 3.4 7 25 .. 877 896 .. 869 940 .. 0.87 6 ? 4.0 0.0 1.6 1.6e+02 12 37 .. 958 985 .. 945 985 .. 0.75 Alignments for each domain: == domain 1 score: 9.2 bits; conditional E-value: 0.037 EEEEESS..SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH..ssvtslafspdgawlasGsdDgtvriWd 38 ++++G +++t++ fs g+ + +G+ g++ +W+ tr|C3ZLL9|C3ZLL9_BRAFL 609 SGVFEGEkpKFITGMEFSATGDVI-TGDSSGNILVWS 644 56788885555************8.7*66*******5 PP == domain 2 score: 9.4 bits; conditional E-value: 0.03 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++H +sv l+ +dg++l+ G+ D+++ Wd tr|C3ZLL9|C3ZLL9_BRAFL 658 MRAHeKSVFTLRMLSDGTLLSGGGVDRKLVAWD 690 689****************976789****9998 PP == domain 3 score: 14.3 bits; conditional E-value: 0.00086 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++ GH ++la++p+ + ++++++D++v +W+ tr|C3ZLL9|C3ZLL9_BRAFL 746 TVIQGHsEELWALAVHPHEHAFLTAGYDNHVCLWS 780 4567**555*****7777777777777*******5 PP == domain 4 score: 11.8 bits; conditional E-value: 0.0052 EEEEETTSSEEEEEETTSEEEEE CS WD40 15 slafspdgawlasGsdDgtvriW 37 +++fspdg++la Gs D+t++++ tr|C3ZLL9|C3ZLL9_BRAFL 840 AIRFSPDGSLLAMGSHDNTIYLF 862 577********99*99****987 PP == domain 5 score: 9.3 bits; conditional E-value: 0.033 EESS.SSEEEEEEETTSSEE CS WD40 7 ltGH.ssvtslafspdgawl 25 l+GH ++ t++++s+dg++l tr|C3ZLL9|C3ZLL9_BRAFL 877 LKGHkNFLTHIDWSSDGRYL 896 78**888***********96 PP == domain 6 score: 4.0 bits; conditional E-value: 1.6 S.EEEEEEETTSSEEE.EEETTSEEEEE CS WD40 12 s.vtslafspdgawla.sGsdDgtvriW 37 s vt ++f d +l+ +G++D ++ W tr|C3ZLL9|C3ZLL9_BRAFL 958 SnVTNVKFLYDDGYLLtTGGMDAALMQW 985 159999977777776539999*999999 PP >> tr|C3YPC7|C3YPC7_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_127384 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.1 0.0 0.039 4.1 10 38 .] 247 276 .. 242 276 .. 0.84 2 ! 31.0 0.0 4.6e-09 4.8e-07 3 37 .. 282 317 .. 280 318 .. 0.94 3 ? 2.0 0.0 6.8 7.1e+02 24 36 .. 380 398 .. 359 398 .. 0.60 4 ! 11.9 0.2 0.005 0.52 8 38 .] 667 698 .. 659 698 .. 0.85 Alignments for each domain: == domain 1 score: 9.1 bits; conditional E-value: 0.039 S.SSE.EEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 H.ssv.tslafspdgawlasGsdDgtvriWd 38 H + +++a+ p ++++++ Dgt ++W+ tr|C3YPC7|C3YPC7_BRAFL 247 HqADLsCCIAYRPKEYFITAAT-DGTMKVWN 276 5445558999999999998888.*******8 PP == domain 2 score: 31.0 bits; conditional E-value: 4.6e-09 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +++++ GH +++t+la +p ++l+sGs+Dg++r+W tr|C3YPC7|C3YPC7_BRAFL 282 QVHEFMGHyGHITGLALHPRYPLLVSGSRDGSIRVW 317 689999**999************************* PP == domain 3 score: 2.0 bits; conditional E-value: 6.8 E.......EEEEETTSEEEE CS WD40 24 w.......lasGsdDgtvri 36 w l++G Dg+vri tr|C3YPC7|C3YPC7_BRAFL 380 WaglpsrvLVTGE-DGSVRI 398 3444444467887.*****8 PP == domain 4 score: 11.9 bits; conditional E-value: 0.005 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 + H ++vt+l+ s+ ++a+ ++D v+iW+ tr|C3YPC7|C3YPC7_BRAFL 667 DDHkKGVTALCCSRTLGLFATTGKDACVKIWN 698 378888**************999********8 PP >> tr|C3ZBB9|C3ZBB9_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_73566 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 12.6 0.1 0.003 0.31 15 37 .. 16 41 .. 7 42 .. 0.75 2 ! 17.9 0.3 6.2e-05 0.0065 10 38 .] 57 86 .. 46 86 .. 0.90 3 ! 17.2 0.2 0.0001 0.011 10 38 .] 98 129 .. 90 129 .. 0.67 4 ! 14.8 0.3 0.00063 0.066 6 38 .] 227 271 .. 224 271 .. 0.80 Alignments for each domain: == domain 1 score: 12.6 bits; conditional E-value: 0.003 EEEEETTSSE...EEEEETTSEEEEE CS WD40 15 slafspdgaw...lasGsdDgtvriW 37 +lafsp + l+sGs+D++vr W tr|C3ZBB9|C3ZBB9_BRAFL 16 ALAFSPAATAttfLVSGSWDNNVRCW 41 555555555556599*********** PP == domain 2 score: 17.9 bits; conditional E-value: 6.2e-05 S.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvriWd 38 H ++v ++++s+dg+ ++s+s D+ + Wd tr|C3ZBB9|C3ZBB9_BRAFL 57 HtGPVLDVCWSDDGTKVFSASCDKQAKCWD 86 7677*************99988*******9 PP == domain 3 score: 17.2 bits; conditional E-value: 0.0001 S.SSEEEEE..EETTSSEEEEEETTSEEEEEE CS WD40 10 H.ssvtsla..fspdgawlasGsdDgtvriWd 38 H ++ + p+ + l++Gs+D+t+++Wd tr|C3ZBB9|C3ZBB9_BRAFL 98 HdAPIKTVHwvKAPNYTCLMTGSWDKTLKFWD 129 65556666433345555599***********9 PP == domain 4 score: 14.8 bits; conditional E-value: 0.00063 EEESS.SS...........EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ss...........vtslafspdgawlasGsdDgtvriWd 38 t++ H s+ v+++af+p + la+++ Dg+ +Wd tr|C3ZBB9|C3ZBB9_BRAFL 227 TFKCHrSNgsnnavqdiyaVNGIAFHPVHGTLATAGSDGKFSFWD 271 677777334677888888899999********97655*******9 PP >> tr|C3XZ00|C3XZ00_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_275805 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 4.0 0.1 1.5 1.6e+02 3 19 .. 8 25 .. 6 45 .. 0.67 2 ? 9.7 0.1 0.025 2.6 6 38 .] 57 90 .. 52 90 .. 0.77 3 ? 1.9 0.0 7.3 7.6e+02 27 38 .] 177 188 .. 159 188 .. 0.84 4 ? 10.7 0.0 0.012 1.2 2 38 .] 193 230 .. 192 230 .. 0.81 5 ! 12.1 0.1 0.0043 0.45 13 37 .. 249 273 .. 239 275 .. 0.90 6 ! 18.1 0.0 5.6e-05 0.0058 2 38 .] 279 320 .. 278 320 .. 0.89 Alignments for each domain: == domain 1 score: 4.0 bits; conditional E-value: 1.5 EEEEEESS.SSEEEEEEE CS WD40 3 clrtltGH.ssvtslafs 19 ++ +l+G + v++l+f+ tr|C3XZ00|C3XZ00_BRAFL 8 PVFVLRGSdGAVNCLKFH 25 78899999666****754 PP == domain 2 score: 9.7 bits; conditional E-value: 0.025 EEESS..SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH..ssvtslafspdgawlasGsdDgtvriWd 38 +l+GH +++ sl d++ l s ++Dgtv +Wd tr|C3XZ00|C3XZ00_BRAFL 57 VLDGHegQGILSL-GFCDSTVLYSQGRDGTVALWD 90 789**85559999.5556666797588*******9 PP == domain 3 score: 1.9 bits; conditional E-value: 7.3 EEETTSEEEEEE CS WD40 27 sGsdDgtvriWd 38 ++ +Dg+v +Wd tr|C3XZ00|C3XZ00_BRAFL 177 AAYEDGSVAMWD 188 4788*******9 PP == domain 4 score: 10.7 bits; conditional E-value: 0.012 EEEEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 +++ +l+ H ++ ++++++++ + +Gs D+++ +W+ tr|C3XZ00|C3XZ00_BRAFL 193 RLVSHLKVHaEPILCMDYDQEHGKgV-TGSADNKLAVWN 230 57899****888****7555555545.8**********8 PP == domain 5 score: 12.1 bits; conditional E-value: 0.0043 EEEEEEETTSSEEEEEETTSEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriW 37 ++++ +d++ +++G++D+ +r++ tr|C3XZ00|C3XZ00_BRAFL 249 LSCVKIRDDHKIVVTGGWDHMIRLY 273 679999*****************96 PP == domain 6 score: 18.1 bits; conditional E-value: 5.6e-05 EEEEEEESS.SSEEEEEEETTSSE....EEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw....lasGsdDgtvriWd 38 ++l +l+ H +sv +++fs++ + la+Gs+D+ + +W+ tr|C3XZ00|C3XZ00_BRAFL 279 KPLAVLDYHtDSVQCVDFSDHENSeerlLAAGSKDQRISLWS 320 67888889*888*****9999999999899***********5 PP >> tr|C3Y0K1|C3Y0K1_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_126831 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 20.5 0.2 9.4e-06 0.00098 6 38 .] 928 963 .. 923 963 .. 0.82 2 ? 7.8 0.0 0.1 11 2 34 .. 969 1001 .. 968 1005 .. 0.85 3 ! 13.3 0.1 0.0019 0.2 4 38 .] 1053 1095 .. 1050 1095 .. 0.79 4 ! 13.8 0.0 0.0013 0.13 7 37 .. 1151 1184 .. 1145 1185 .. 0.80 5 ? 3.7 0.1 2 2.1e+02 14 37 .. 1212 1227 .. 1195 1228 .] 0.74 Alignments for each domain: == domain 1 score: 20.5 bits; conditional E-value: 9.4e-06 EEESS.SSEEEEEEETTSSE........EEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgaw........lasGsdDgtvriWd 38 l GH ++v+ + w l+s+s+D+tvr+Wd tr|C3Y0K1|C3Y0K1_BRAFL 928 DLQGHtGPVNTV------EWckadcshlLLSSSMDRTVRVWD 963 589**888****......7777777787779999*******9 PP == domain 2 score: 7.8 bits; conditional E-value: 0.1 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtv 34 +c+rtlt H +v a+ +d++ l s+s D+t tr|C3Y0K1|C3Y0K1_BRAFL 969 KCVRTLTNHrAGVKMAAWTSDKKVL-SCSFDKTA 1001 8********999*7777*******9.57779985 PP == domain 3 score: 13.3 bits; conditional E-value: 0.0019 EEEEESS.SSEEEEEEETTSSEEEEEET.......TSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsd.......DgtvriWd 38 +r ++ +sv +laf +dg+ ++s+ d D+t+++Wd tr|C3Y0K1|C3Y0K1_BRAFL 1053 VRDFKCKfGSVLDLAFLSDGKSFVSSADvvardsaDKTIMVWD 1095 56666665679***********9987655666777*******9 PP == domain 4 score: 13.8 bits; conditional E-value: 0.0013 EESS..SS..EEEEEEETTSSEEEEEETTSEEEEE CS WD40 7 ltGH..ss..vtslafspdgawlasGsdDgtvriW 37 ++GH ++ + ++ f pdg+++++Gs Dg+v+ + tr|C3Y0K1|C3Y0K1_BRAFL 1151 FEGHkvQGyrI-GCEFTPDGQMIVTGSGDGKVHYF 1184 78996544677.888***********99***9865 PP == domain 5 score: 3.7 bits; conditional E-value: 2 EEEEEETTSSEEEEEETTSEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriW 37 +s la++s+ g v +W tr|C3Y0K1|C3Y0K1_BRAFL 1212 SST--------LATCSWSGQVSVW 1227 344........99*********** PP >> tr|C3YGA6|C3YGA6_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_92850 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.1 0.3 3.1 3.2e+02 13 28 .. 34 50 .. 14 59 .. 0.68 2 ? 5.3 0.0 0.62 64 13 38 .] 82 107 .. 72 107 .. 0.84 3 ! 23.8 0.0 8.5e-07 8.8e-05 3 38 .] 111 150 .. 109 150 .. 0.84 4 ! 25.7 0.1 2.2e-07 2.3e-05 2 38 .] 160 197 .. 159 197 .. 0.94 5 ? 2.9 0.1 3.6 3.8e+02 30 38 .] 209 217 .. 200 217 .. 0.71 Alignments for each domain: == domain 1 score: 3.1 bits; conditional E-value: 3.1 EEEEEEETTSSEEE.EE CS WD40 13 vtslafspdgawla.sG 28 v + afspdg+ ++ s+ tr|C3YGA6|C3YGA6_BRAFL 34 VLDTAFSPDGTCVIySS 50 445569****9986354 PP == domain 2 score: 5.3 bits; conditional E-value: 0.62 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 + s+ fs+dg+ ++ G D+ +i++ tr|C3YGA6|C3YGA6_BRAFL 82 IFSVVFSHDGKEILGGASDCYMYIFN 107 88999*********7745*9999886 PP == domain 3 score: 23.8 bits; conditional E-value: 8.5e-07 EEEEE..ESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 3 clrtl..tGH.ssvtslafspdgawla.sGsdDgtvriWd 38 ++rtl ++H ++++s++f ++++ ++ s++dDg +++Wd tr|C3YGA6|C3YGA6_BRAFL 111 NQRTLmmDAHeDDINSVKFADESSHILySAGDDGVCKVWD 150 666754479*999************7669999*******9 PP == domain 4 score: 25.7 bits; conditional E-value: 2.2e-07 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 q+++++ GH +++t ++ dg++l++ s+D+t+++Wd tr|C3YGA6|C3YGA6_BRAFL 160 QPVGIFAGHsDGITYIDSKGDGRYLITNSKDQTIKLWD 197 7999*****666**************99*********9 PP == domain 5 score: 2.9 bits; conditional E-value: 3.6 TTSEEEEEE CS WD40 30 dDgtvriWd 38 +Dg+v Wd tr|C3YGA6|C3YGA6_BRAFL 209 WDGHVSQWD 217 7*******9 PP >> tr|C3Z2M1|C3Z2M1_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_118148 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 4.2 0.1 1.4 1.4e+02 14 30 .. 66 82 .. 50 88 .. 0.81 2 ! 19.9 1.4 1.5e-05 0.0016 6 38 .] 101 134 .. 98 134 .. 0.94 3 ? 3.9 0.0 1.7 1.8e+02 8 33 .. 147 175 .. 141 178 .. 0.67 4 ? 10.5 0.0 0.013 1.4 25 37 .. 213 225 .. 188 226 .. 0.83 5 ! 11.5 0.0 0.0069 0.71 13 38 .] 288 315 .. 278 315 .. 0.74 Alignments for each domain: == domain 1 score: 4.2 bits; conditional E-value: 1.4 EEEEEETTSSEEEEEET CS WD40 14 tslafspdgawlasGsd 30 t+ +fs+dg+ +++Gs tr|C3Z2M1|C3Z2M1_BRAFL 66 TCTDFSRDGSRVVAGST 82 7889*********9974 PP == domain 2 score: 19.9 bits; conditional E-value: 1.5e-05 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +l GH s ++ + f+p +++l+s+++ +r+Wd tr|C3Z2M1|C3Z2M1_BRAFL 101 HLHGHtSTIRNVHFHPTNSLLLSSGWSDGIRVWD 134 789**777*************************9 PP == domain 3 score: 3.9 bits; conditional E-value: 1.7 ESSSS...EEEEEEETTSSEEE.EEETTSE CS WD40 8 tGHss...vtslafspdgawla.sGsdDgt 33 + H++ ++ + s dg++l+ ++s Dg tr|C3Z2M1|C3Z2M1_BRAFL 147 KEHFGeetIYKTSMSEDGKLLTvCCS-DGV 175 56722366844455*******73567.996 PP == domain 4 score: 10.5 bits; conditional E-value: 0.013 EEEEETTSEEEEE CS WD40 25 lasGsdDgtvriW 37 +a++s Dgtv++W tr|C3Z2M1|C3Z2M1_BRAFL 213 IATASHDGTVKVW 225 788888******* PP == domain 5 score: 11.5 bits; conditional E-value: 0.0069 EEEEEEETTSSE..EEEEETTSEEEEEE CS WD40 13 vtslafspdgaw..lasGsdDgtvriWd 38 + +++fs+ + +++G+ D t+r+W+ tr|C3Z2M1|C3Z2M1_BRAFL 288 IKCMDFSRMSGSrrMVTGHADSTLRVWN 315 66776444444455679**********8 PP >> tr|C3YSJ1|C3YSJ1_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_118545 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 12.6 0.1 0.0031 0.32 6 38 .] 832 863 .. 829 863 .. 0.93 2 ? 7.1 0.1 0.17 17 5 37 .. 1246 1277 .. 1218 1278 .. 0.73 3 ! 24.5 0.1 5.3e-07 5.5e-05 3 38 .] 1284 1321 .. 1283 1321 .. 0.91 4 ! 16.2 2.2 0.00022 0.023 1 38 [] 1325 1361 .. 1325 1361 .. 0.79 5 ? 3.7 0.2 1.9 2e+02 21 38 .] 1385 1401 .. 1374 1401 .. 0.87 Alignments for each domain: == domain 1 score: 12.6 bits; conditional E-value: 0.0031 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +l+GH ++v ++ ++dg+ l+s++ g +r+Wd tr|C3YSJ1|C3YSJ1_BRAFL 832 VLRGHtQDVECM--CSDGPTLVSSCLLGDIRVWD 863 689**999****..99******9999*******9 PP == domain 2 score: 7.1 bits; conditional E-value: 0.17 EEEESS.SSEEEEEEETTSSE....EEEEETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgaw....lasGsdDgtvriW 37 r+ +H ++++ l + +++Gs D+t++++ tr|C3YSJ1|C3YSJ1_BRAFL 1246 RVPHAHqQPINVL------QCsagrVVTGSQDHTLKVY 1277 5555676665433......223334779********98 PP == domain 3 score: 24.5 bits; conditional E-value: 5.3e-07 EEEEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 cl+tl GH ++vt+l ++ ++ a sGs Dg vr+Wd tr|C3YSJ1|C3YSJ1_BRAFL 1284 CLYTLHGHtNGVTALHLDKTPPLAAaSGSLDGDVRLWD 1321 99******999****999999997548899*******9 PP == domain 4 score: 16.2 bits; conditional E-value: 0.00022 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+c+++ltGH ++ sl + ++s++ D + +Wd tr|C3YSJ1|C3YSJ1_BRAFL 1325 GSCVHHLTGHeAGILSL--TCTATHVLSSGQDDRICVWD 1361 68********8888777..333444778999*******9 PP == domain 5 score: 3.7 bits; conditional E-value: 1.9 TSSEEEEEETTSEEEEEE CS WD40 21 dgawlasGsdDgtvriWd 38 ++++l+sG+ g +++W+ tr|C3YSJ1|C3YSJ1_BRAFL 1385 NSSLLVSGG-QGCLYLWN 1401 45679****.*******8 PP >> tr|C3YYV5|C3YYV5_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_83268 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 8.2 0.2 0.073 7.6 9 36 .. 252 281 .. 243 281 .. 0.78 2 ! 25.3 0.2 3e-07 3.1e-05 8 37 .. 294 324 .. 288 325 .. 0.89 3 ! 13.0 0.0 0.0022 0.23 1 37 [. 338 375 .. 338 376 .. 0.78 4 ? 4.1 0.0 1.5 1.5e+02 9 36 .. 482 509 .. 474 510 .. 0.83 Alignments for each domain: == domain 1 score: 8.2 bits; conditional E-value: 0.073 SSSSE.EEEE.EETTSSEEEEE.ETTSEEEE CS WD40 9 GHssv.tsla.fspdgawlasG.sdDgtvri 36 GH ++ ++l +s+d ++l+sG ++D+++r+ tr|C3YYV5|C3YYV5_BRAFL 252 GH-PItSDLFvVSHDAKLLFSGgHWDNSLRV 281 88.7744666689999****99569****97 PP == domain 2 score: 25.3 bits; conditional E-value: 3e-07 ESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 8 tGHss.vtslafspdgawlasGsdDgtvriW 37 t H++ vt+la + g+ l+sGs+D t++iW tr|C3YYV5|C3YYV5_BRAFL 294 TRHNDiVTCLALDNCGNHLISGSRDTTCMIW 324 5698857************************ PP == domain 3 score: 13.0 bits; conditional E-value: 0.0022 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 g++l++l GH + vt++ + ++ +s+s+Dgt+ ++ tr|C3YYV5|C3YYV5_BRAFL 338 GRPLHVLYGHdDEVTAVGITIELDMAVSASKDGTCNMY 375 689*******5559999555555667899*****9875 PP == domain 4 score: 4.1 bits; conditional E-value: 1.5 SSSSEEEEEEETTSSEEEEEETTSEEEE CS WD40 9 GHssvtslafspdgawlasGsdDgtvri 36 H+ ++++ + p ++ +++G +Dg++ i tr|C3YYV5|C3YYV5_BRAFL 482 LHKQISCIFVTPGNSHIMAGLEDGKLII 509 5988**************9*89*99865 PP >> tr|C3XYM7|C3XYM7_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_115340 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 29.5 1.3 1.4e-08 1.4e-06 1 38 [] 941 979 .. 941 979 .. 0.95 2 ? 6.5 0.1 0.25 26 11 35 .. 1001 1025 .. 991 1027 .. 0.81 3 ? 8.6 0.0 0.057 5.9 22 38 .] 1207 1223 .. 1188 1223 .. 0.75 4 ! 15.6 0.1 0.00034 0.035 9 38 .] 1283 1314 .] 1277 1314 .] 0.75 Alignments for each domain: == domain 1 score: 29.5 bits; conditional E-value: 1.4e-08 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 gq++ +l H sv+ +++s+d+++++++s Dgtv+iWd tr|C3XYM7|C3XYM7_BRAFL 941 GQLVAHLHEHkASVNRISVSHDHQFFSTCSNDGTVKIWD 979 68999*****888*************************9 PP == domain 2 score: 6.5 bits; conditional E-value: 0.25 SSEEEEEEETTSSEEEEEETTSEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvr 35 + + +l f+++++ +as+sd+g++ tr|C3XYM7|C3XYM7_BRAFL 1001 GQIKCLTFCQSSHSVASASDNGSIQ 1025 339****************999996 PP == domain 3 score: 8.6 bits; conditional E-value: 0.057 SSEEE.EEETTSEEEEEE CS WD40 22 gawla.sGsdDgtvriWd 38 +++l+ +Gs D+ +r+Wd tr|C3XYM7|C3XYM7_BRAFL 1207 NPFLLtAGS-DQRIRMWD 1223 455551677.*******9 PP == domain 4 score: 15.6 bits; conditional E-value: 0.00034 SS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgaw.lasGsdDgtvriWd 38 GH + vt++a+++ + ++s+s+Dg +++W+ tr|C3XYM7|C3XYM7_BRAFL 1283 GHqDTVTDIAVCQVAQSlILSCSRDGVIKVWK 1314 9*666999984444444267***********6 PP >> tr|C3Y1D3|C3Y1D3_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_123577 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.5 0.2 0.00017 0.018 11 38 .] 327 354 .. 316 354 .. 0.84 2 ! 13.6 0.6 0.0015 0.15 4 38 .] 362 397 .. 359 397 .. 0.90 3 ? 2.4 0.1 5.1 5.3e+02 10 38 .] 458 487 .. 453 487 .. 0.66 4 ! 12.2 0.0 0.0041 0.43 8 38 .] 498 535 .. 491 535 .. 0.80 5 ? 5.3 0.9 0.61 63 23 38 .] 605 622 .. 555 622 .. 0.78 6 ? 3.2 0.1 2.9 3e+02 20 37 .. 769 786 .. 752 787 .. 0.78 7 ? 6.4 0.0 0.27 29 7 38 .] 798 832 .. 792 832 .. 0.81 Alignments for each domain: == domain 1 score: 16.5 bits; conditional E-value: 0.00017 SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriWd 38 ++v++++f++ ++ +a+G++D +vriW+ tr|C3Y1D3|C3Y1D3_BRAFL 327 KGVCAVDFCSIKNVIATGGMDWSVRIWN 354 3499**9********************8 PP == domain 2 score: 13.6 bits; conditional E-value: 0.0015 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++++GH s v ++ + + g+ ++s ++ ++v++Wd tr|C3Y1D3|C3Y1D3_BRAFL 362 TTVFRGHnSAVLHVMWTDQGQHIVSVDKGKNVKVWD 397 5789***666**************99*********9 PP == domain 3 score: 2.4 bits; conditional E-value: 5.1 S.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvriWd 38 H ++++ + +++ + ++s s D +++W+ tr|C3Y1D3|C3Y1D3_BRAFL 458 HeQPICTILYNDLFDVIVSVSHDDMIHVWS 487 5555655543333344887777*******5 PP == domain 4 score: 12.2 bits; conditional E-value: 0.0041 ESS..SS.....EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH..ss.....vtslafspdgawlasGsdDgtvriWd 38 + H + +t+++f+p ++ l++G++ g v iW+ tr|C3Y1D3|C3Y1D3_BRAFL 498 SIHhgKEedcpeITAMCFDPTKRRLITGTKAGQVQIWN 535 434343366789*************************8 PP == domain 5 score: 5.3 bits; conditional E-value: 0.61 SE..EEEEETTSEEEEEE CS WD40 23 aw..lasGsdDgtvriWd 38 ++ la++s+Dg + +W+ tr|C3Y1D3|C3Y1D3_BRAFL 605 PLsiLATSSYDGDIILWS 622 3333789999*******5 PP == domain 6 score: 3.2 bits; conditional E-value: 2.9 TTSSEEEEEETTSEEEEE CS WD40 20 pdgawlasGsdDgtvriW 37 +d a l++++ Dg vr W tr|C3Y1D3|C3Y1D3_BRAFL 769 QDTAILLACGADGWVRAW 786 55666777777*****99 PP == domain 7 score: 6.4 bits; conditional E-value: 0.27 EESS.SS..EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ss..vtslafspdgawlasGsdDgtvriWd 38 +++ ++ + ++ +++++ +l++G+ g +++Wd tr|C3Y1D3|C3Y1D3_BRAFL 798 FRATeKDigILAMETDSNNEFLFTGDTAGYIKVWD 832 555656655678889**********99*******9 PP >> tr|C3ZCW7|C3ZCW7_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_284119 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 5.4 0.0 0.55 58 7 37 .. 57 92 .. 50 93 .. 0.71 2 ! 23.5 0.0 1.1e-06 0.00012 17 38 .] 153 184 .. 130 184 .. 0.77 3 ! 14.0 0.0 0.0011 0.11 7 38 .] 194 226 .. 188 226 .. 0.90 4 ? 6.4 0.0 0.27 28 8 35 .. 342 381 .. 334 382 .. 0.79 Alignments for each domain: == domain 1 score: 5.4 bits; conditional E-value: 0.55 EESS.SS...EEEEE..EETTSSEEEEEETTSEEEEE CS WD40 7 ltGH.ss...vtsla..fspdgawlasGsdDgtvriW 37 l H ++ v sla + g+++a+G+ Dg++ ++ tr|C3ZCW7|C3ZCW7_BRAFL 57 LHKHsTDpraVMSLAakADGKGHLVAAGM-DGKCQLF 92 66675346888888877777888888888.**99775 PP == domain 2 score: 23.5 bits; conditional E-value: 1.1e-06 E..........EETTSSEEEEEETTSEEEEEE CS WD40 17 a..........fspdgawlasGsdDgtvriWd 38 fs+dg+ +a+G+ Dg+vr+W+ tr|C3ZCW7|C3ZCW7_BRAFL 153 HkeepfqkvvrFSRDGDIIATGGADGHVRVWK 184 15555555556********************6 PP == domain 3 score: 14.0 bits; conditional E-value: 0.0011 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++H + + +l+ sp+g+ ++s s+D + ++W+ tr|C3ZCW7|C3ZCW7_BRAFL 194 IKAHlDEIDDLDISPSGNKIVSVSRDYHAYVWK 226 4799999**************99*********6 PP == domain 4 score: 6.4 bits; conditional E-value: 0.27 ESSSS..EEEEEEETTSSE...........EEEEETTSEEE CS WD40 8 tGHss..vtslafspdgaw...........lasGsdDgtvr 35 ++H + vt+l+f +++a l+s s D++v tr|C3ZCW7|C3ZCW7_BRAFL 342 EAH-GifVTGLCFLKNNAItaeltkgaetaLVSVSADHHVN 381 488.4469***********99999999999888888**996 PP >> tr|C3ZYW7|C3ZYW7_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_132368 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 29.5 1.3 1.4e-08 1.5e-06 1 38 [] 961 999 .. 961 999 .. 0.95 2 ? 6.5 0.1 0.26 27 11 35 .. 1021 1045 .. 1011 1047 .. 0.81 3 ? 8.5 0.0 0.058 6 22 38 .] 1227 1243 .. 1208 1243 .. 0.75 4 ! 15.6 0.1 0.00034 0.036 9 38 .] 1303 1334 .] 1297 1334 .] 0.75 Alignments for each domain: == domain 1 score: 29.5 bits; conditional E-value: 1.4e-08 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 gq++ +l H sv+ +++s+d+++++++s Dgtv+iWd tr|C3ZYW7|C3ZYW7_BRAFL 961 GQLVAHLHEHkASVNRISVSHDHQFFSTCSNDGTVKIWD 999 68999*****888*************************9 PP == domain 2 score: 6.5 bits; conditional E-value: 0.26 SSEEEEEEETTSSEEEEEETTSEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvr 35 + + +l f+++++ +as+sd+g++ tr|C3ZYW7|C3ZYW7_BRAFL 1021 GQIKCLTFCQSSHSVASASDNGSIQ 1045 339****************999996 PP == domain 3 score: 8.5 bits; conditional E-value: 0.058 SSEEE.EEETTSEEEEEE CS WD40 22 gawla.sGsdDgtvriWd 38 +++l+ +Gs D+ +r+Wd tr|C3ZYW7|C3ZYW7_BRAFL 1227 NPFLLtAGS-DQRIRMWD 1243 455551677.*******9 PP == domain 4 score: 15.6 bits; conditional E-value: 0.00034 SS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgaw.lasGsdDgtvriWd 38 GH + vt++a+++ + ++s+s+Dg +++W+ tr|C3ZYW7|C3ZYW7_BRAFL 1303 GHqDTVTDIAVCQVAQSlILSCSRDGVIKVWK 1334 9*666999984444444267***********6 PP >> tr|C3ZSI2|C3ZSI2_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_116978 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 20.3 0.1 1.1e-05 0.0011 5 38 .] 60 95 .. 57 95 .. 0.81 2 ! 23.4 0.2 1.1e-06 0.00012 2 38 .] 100 137 .. 99 137 .. 0.80 3 ? 9.8 0.0 0.023 2.4 3 38 .] 188 225 .. 186 225 .. 0.77 Alignments for each domain: == domain 1 score: 20.3 bits; conditional E-value: 1.1e-05 EEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 + l+GH ++v+++a +p + l++G Dg ++iW+ tr|C3ZSI2|C3ZSI2_BRAFL 60 GALDGHrDGVNCMAKHPGSLStLLTGACDGEIKIWN 95 5689**999****966665556889*66*******8 PP == domain 2 score: 23.4 bits; conditional E-value: 1.1e-06 EEEEEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 +c rt+ +H ++v++l++ pd++ ++ G+ D+t+++W+ tr|C3ZSI2|C3ZSI2_BRAFL 100 DCRRTIQAHsGFVRGLCVTPDHSNFLsIGD-DKTIKMWS 137 799******666*****7777777661566.*******5 PP == domain 3 score: 9.8 bits; conditional E-value: 0.023 EEEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 +lr+++ +s ++++f+p + las+ D+++ ++d tr|C3ZSI2|C3ZSI2_BRAFL 188 PLRSFSWGvDSLNCVRFNPIEKHyLASCAADRSIILYD 225 666666444568999977777777999999*****998 PP >> tr|C3Z454|C3Z454_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_78448 PE=4 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 2.7 0.0 4 4.2e+02 14 35 .. 38 59 .. 10 64 .. 0.81 2 ? 2.2 0.1 5.9 6.1e+02 13 38 .] 117 143 .. 95 143 .. 0.68 3 ! 25.5 0.0 2.6e-07 2.7e-05 9 38 .] 155 186 .. 148 186 .. 0.85 4 ! 20.0 0.1 1.4e-05 0.0014 3 31 .. 193 222 .. 191 224 .] 0.82 Alignments for each domain: == domain 1 score: 2.7 bits; conditional E-value: 4 EEEEEETTSSEEE.EEETTSEEE CS WD40 14 tslafspdgawla.sGsdDgtvr 35 ++ af pd++++a s++ + vr tr|C3Z454|C3Z454_BRAFL 38 WCSAFAPDNSYFAwSCG-HRLVR 59 46679*******99887.66665 PP == domain 2 score: 2.2 bits; conditional E-value: 5.9 EEEEE...EETTSSE.EEEEETTSEEEEEE CS WD40 13 vtsla...fspdgaw.lasGsdDgtvriWd 38 v + f+ +++ la+G g ++ Wd tr|C3Z454|C3Z454_BRAFL 117 V---SfhrFNFGKDLiLATGLQSGRIKTWD 143 3...13347777888346887899999998 PP == domain 3 score: 25.5 bits; conditional E-value: 2.6e-07 SSSS.EEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 9 GHss.vtslafspdgaw.lasGsdDgtvriWd 38 H+ +++l+f pdg++ las+s+D+t+++Wd tr|C3Z454|C3Z454_BRAFL 155 DHKEvIRDLQFAPDGSMfLASASRDKTLKVWD 186 697756***********446789********9 PP == domain 4 score: 20.0 bits; conditional E-value: 1.4e-05 EEEEEESS.SSEEEEEEETTSSEEEEEETT CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdD 31 +tl+GH ++v+s+++spd + las + + tr|C3Z454|C3Z454_BRAFL 193 MKKTLKGHnGWVYSCSWSPDAKILASVGQN 222 5689****666*************987755 PP >> tr|C3ZDJ4|C3ZDJ4_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_275667 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 1.9 0.1 7.2 7.5e+02 13 37 .. 17 40 .. 8 41 .. 0.74 2 ! 15.5 0.0 0.00037 0.038 5 38 .] 102 136 .. 98 136 .. 0.84 3 ? 2.9 0.0 3.5 3.6e+02 11 29 .. 150 169 .. 141 175 .. 0.76 4 ! 13.0 0.1 0.0023 0.24 7 38 .] 186 218 .. 182 218 .. 0.90 5 ? 10.9 0.0 0.01 1.1 6 29 .. 226 250 .. 221 260 .. 0.77 6 ? 5.6 0.1 0.49 51 12 34 .. 273 295 .. 265 297 .. 0.82 Alignments for each domain: == domain 1 score: 1.9 bits; conditional E-value: 7.2 EEEEEEETTSSE.....EEEEETTSEEEEE CS WD40 13 vtslafspdgaw.....lasGsdDgtvriW 37 v+s+ w l s+sdD+ + W tr|C3ZDJ4|C3ZDJ4_BRAFL 17 VSSV------GWttadeLYSCSDDHAILKW 40 6777......6666666899****999877 PP == domain 2 score: 15.5 bits; conditional E-value: 0.00037 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++ ++H + v s ++s dg+ +a++++Dg vriW+ tr|C3ZDJ4|C3ZDJ4_BRAFL 102 KSVEAHkGAVLSGRWSYDGTAMATAGEDGQVRIWS 136 56778955588888********************5 PP == domain 3 score: 2.9 bits; conditional E-value: 3.5 SSEEEEEEETTSSEEE.EEE CS WD40 11 ssvtslafspdgawla.sGs 29 ++v+sla+ pd++ ++ +++ tr|C3ZDJ4|C3ZDJ4_BRAFL 150 TPVYSLAWGPDSDQILyTSG 169 47***********9754554 PP == domain 4 score: 13.0 bits; conditional E-value: 0.0023 EESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGHss.vtslafspdgawlasGsdDgtvriWd 38 ++GH + + ++++ +++++sG++D+ ++Wd tr|C3ZDJ4|C3ZDJ4_BRAFL 186 WKGHEGvILKVDWNAVNNLILSGGEDCRYKVWD 218 58**6647************************9 PP == domain 5 score: 10.9 bits; conditional E-value: 0.01 EEESS.SSEEEEEEETTSSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGs 29 t H ++ts+++ pdg ++a Gs tr|C3ZDJ4|C3ZDJ4_BRAFL 226 TSQVHdYPITSVSWAPDGELFAVGS 250 44568445**************998 PP == domain 6 score: 5.6 bits; conditional E-value: 0.49 SEEEEEEETTSSEEE.EEETTSEE CS WD40 12 svtslafspdgawla.sGsdDgtv 34 sv +a+s+dg+ +a +++ +g+v tr|C3ZDJ4|C3ZDJ4_BRAFL 273 SVFNIAWSSDGTQIAgACG-NGHV 295 4899**********96667.9998 PP >> tr|C3XZ37|C3XZ37_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_260479 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.7 0.0 1.9 2e+02 8 28 .. 46 68 .. 36 71 .. 0.78 2 ! 19.6 0.1 1.8e-05 0.0019 8 38 .] 136 167 .. 129 167 .. 0.83 3 ? 9.8 0.2 0.024 2.5 14 37 .. 281 303 .. 257 304 .. 0.75 4 ! 18.2 0.0 5.3e-05 0.0055 6 38 .] 323 356 .. 319 356 .. 0.92 Alignments for each domain: == domain 1 score: 3.7 bits; conditional E-value: 1.9 ESS.SSEEEEE.EETTSSEEEEE CS WD40 8 tGH.ssvtsla.fspdgawlasG 28 GH ++v+++ ++ g++l+sG tr|C3XZ37|C3XZ37_BRAFL 46 FGHyGCVNAIEfSNHGGDFLISG 68 39*999*****777777778777 PP == domain 2 score: 19.6 bits; conditional E-value: 1.8e-05 ESS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawl.asGsdDgtvriWd 38 + H + v++l+++p+++ + as++dDg v iWd tr|C3XZ37|C3XZ37_BRAFL 136 R-HeDAVYGLSVDPNNDNVfASACDDGRVLIWD 167 4.8667************8346689*******9 PP == domain 3 score: 9.8 bits; conditional E-value: 0.024 EEEEEETTSSEEEEEETTSEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriW 37 +++a ++d+ +l sGsdD ++++W tr|C3XZ37|C3XZ37_BRAFL 281 CCFAGDRDQYLL-SGSDDFNLYLW 303 366666666665.8********** PP == domain 4 score: 18.2 bits; conditional E-value: 5.3e-05 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +l+GH s v+ ++f+p ++++s++ + +++W+ tr|C3XZ37|C3XZ37_BRAFL 323 VLKGHrSIVNQVRFNPATHLVVSSGVEKVIKVWS 356 699**7779*************9999*******5 PP >> tr|C3Y2U8|C3Y2U8_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_236265 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 25.6 0.1 2.4e-07 2.5e-05 5 37 .. 91 124 .. 88 125 .. 0.90 2 ? 4.8 0.0 0.89 93 14 38 .] 483 503 .. 461 503 .. 0.67 3 ! 16.2 0.0 0.00022 0.023 10 37 .. 515 544 .. 507 545 .. 0.80 Alignments for each domain: == domain 1 score: 25.6 bits; conditional E-value: 2.4e-07 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriW 37 tl+ H + v +++fs++g+++as+s+Dg +++W tr|C3Y2U8|C3Y2U8_BRAFL 91 ETLKEHtDQVLHVSFSHNGNMFASSSKDGFIKVW 124 57999*666************************* PP == domain 2 score: 4.8 bits; conditional E-value: 0.89 EEEEEETTSSEEEEEETTSEEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriWd 38 ++ + ++asG +D++ +iWd tr|C3Y2U8|C3Y2U8_BRAFL 483 LDV----ANEFVASGAEDHNGYIWD 503 445....4578*************9 PP == domain 3 score: 16.2 bits; conditional E-value: 0.00022 SSS.EEEEEEETTSSE.EEEEETTSEEEEE CS WD40 10 Hss.vtslafspdgaw.lasGsdDgtvriW 37 H++ v+s+af+p + l+++sdD t+++W tr|C3Y2U8|C3Y2U8_BRAFL 515 HTDvVNSVAFNPQDPEmLITASDDFTLKVW 544 87757****88888884679********** PP >> tr|C3YB26|C3YB26_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_115453 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 5.3 0.0 0.61 64 13 29 .. 12 28 .. 4 32 .. 0.84 2 ? 9.1 0.0 0.04 4.1 2 37 .. 52 85 .. 51 86 .. 0.88 3 ? 10.7 0.5 0.012 1.2 13 38 .] 114 138 .. 96 138 .. 0.70 4 ! 28.1 0.2 3.9e-08 4e-06 1 38 [] 142 180 .. 142 180 .. 0.91 Alignments for each domain: == domain 1 score: 5.3 bits; conditional E-value: 0.61 EEEEEEETTSSEEEEEE CS WD40 13 vtslafspdgawlasGs 29 v s++fsp g+++a ++ tr|C3YB26|C3YB26_BRAFL 12 VFSQSFSPCGRFVAVCD 28 889*********99764 PP == domain 2 score: 9.1 bits; conditional E-value: 0.04 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +++ t+ +H ++v+ l s+ ++l+s++ g ++ W tr|C3YB26|C3YB26_BRAFL 52 KPVFTFQAHnGPVYTL--SSTERFLISAG-TGDIKAW 85 7999*****777****..********999.9988888 PP == domain 3 score: 10.7 bits; conditional E-value: 0.012 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 +s+ +dg++ +sG+ D++v++Wd tr|C3YB26|C3YB26_BRAFL 114 TNSIVITKDGTL-CSGCGDNNVYLWD 138 467778889999.57866*******9 PP == domain 4 score: 28.1 bits; conditional E-value: 3.9e-08 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+c+ tl+GH + +++l + + ++s+++Dg+vriWd tr|C3YB26|C3YB26_BRAFL 142 GTCTNTLKGHtDYIHALTLRGNDQQVVSAGEDGSVRIWD 180 6899******555****99999999**99*********9 PP >> tr|C3Y342|C3Y342_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_93483 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 4.6 0.0 1 1.1e+02 7 37 .. 284 314 .. 273 315 .. 0.81 2 ! 11.2 0.3 0.0083 0.87 12 38 .] 337 365 .. 327 365 .. 0.80 3 ! 15.6 0.0 0.00035 0.036 5 37 .. 373 407 .. 369 407 .. 0.87 4 ! 13.7 0.1 0.0014 0.14 12 38 .] 423 450 .. 412 450 .. 0.81 Alignments for each domain: == domain 1 score: 4.6 bits; conditional E-value: 1 EESSSSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 7 ltGHssvtslafspdgawlasGsdDgtvriW 37 + G s v+s+ f++d+ ++a ++ ++++++ tr|C3Y342|C3Y342_BRAFL 284 YNGSSIVSSIEFDRDNEYFAIAGVTKKIKVF 314 5566448***********9977778888876 PP == domain 2 score: 11.2 bits; conditional E-value: 0.0083 S.EEEEEEETTSSEEEEEE.TTSEEEEEE CS WD40 12 s.vtslafspdgawlasGs.dDgtvriWd 38 s ++++++s++++ ++++s + gtv +Wd tr|C3Y342|C3Y342_BRAFL 337 SkISCVCWSSYHKGMLASSdYEGTVTLWD 365 349****99999997656516*******9 PP == domain 3 score: 15.6 bits; conditional E-value: 0.00035 EEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEE CS WD40 5 rtltGH.ssvtsla.fspdgawlasGsdDgtvriW 37 r + H + +s++ ++ d ++lasGsdD +v++W tr|C3Y342|C3Y342_BRAFL 373 RMFQEHeKRCWSVDfNHVDPKLLASGSDDAKVKLW 407 67889988899999888888999************ PP == domain 4 score: 13.7 bits; conditional E-value: 0.0014 SEEEEEEETTSSEEEE.EETTSEEEEEE CS WD40 12 svtslafspdgawlas.GsdDgtvriWd 38 +v++++f+p+++++++ Gs D+ v+ +d tr|C3Y342|C3Y342_BRAFL 423 NVCCVKFNPNSRFHIAfGSADHCVHYYD 450 49***********8765999****9877 PP >> tr|C3YIV2|C3YIV2_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_86651 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.5 0.0 0.029 3 9 33 .. 5 29 .. 1 34 [. 0.76 2 ! 18.7 0.1 3.5e-05 0.0036 8 38 .] 46 76 .. 38 76 .. 0.78 3 ! 13.9 0.1 0.0012 0.12 3 38 .] 83 119 .. 81 119 .. 0.88 4 ? 3.7 0.0 2 2.1e+02 12 27 .. 273 288 .. 259 310 .. 0.79 5 ? 3.0 0.0 3.3 3.4e+02 10 36 .. 334 353 .. 318 355 .. 0.67 Alignments for each domain: == domain 1 score: 9.5 bits; conditional E-value: 0.029 SSSSEEEEEEETTSSEEEEEETTSE CS WD40 9 GHssvtslafspdgawlasGsdDgt 33 +H+ v l fspdg+ la++++ tr|C3YIV2|C3YIV2_BRAFL 5 THGAVFNLEFSPDGKVLAAACEHTD 29 4666*************99885555 PP == domain 2 score: 18.7 bits; conditional E-value: 3.5e-05 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++H ++v++++f + +a++sdD++v +Wd tr|C3YIV2|C3YIV2_BRAFL 46 RAHlDCVNCIRFLDARM-FATCSDDCSVSLWD 76 599999****5554444.589**********9 PP == domain 3 score: 13.9 bits; conditional E-value: 0.0012 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + l+GH ++v + +s+ + +l++++ Dg v Wd tr|C3YIV2|C3YIV2_BRAFL 83 SICQLKGHtNWVKNIEYSRKSGLLLTSGFDGRVLTWD 119 566799**999************998877*****998 PP == domain 4 score: 3.7 bits; conditional E-value: 2 SEEEEEEETTSSEEEE CS WD40 12 svtslafspdgawlas 27 ++ l+fs+dg++++s tr|C3YIV2|C3YIV2_BRAFL 273 FIKELCFSDDGRLVCS 288 38899********865 PP == domain 5 score: 3.0 bits; conditional E-value: 3.3 S.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvri 36 s+++++ l+sG+ g++ + tr|C3YIV2|C3YIV2_BRAFL 334 KfSPIHCM--------LVSGCLSGKIFF 353 33446666........****98887765 PP >> tr|C3Z7P2|C3Z7P2_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_69215 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.6 0.0 0.00033 0.034 3 38 .] 119 155 .. 117 155 .. 0.89 2 ! 25.8 0.1 2.1e-07 2.2e-05 6 38 .] 177 211 .. 172 211 .. 0.86 Alignments for each domain: == domain 1 score: 15.6 bits; conditional E-value: 0.00033 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 c+++l + +++++f+ dg+ +a+ ++D+++r++d tr|C3Z7P2|C3Z7P2_BRAFL 119 CTHSLQEDqNEINAMDFNLDGTVFATVGKDRHIRMYD 155 78888766578***************9********98 PP == domain 2 score: 25.8 bits; conditional E-value: 2.1e-07 EEESSSS.EEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 6 tltGHss.vtslafspdgawl.asGsdDgtvriWd 38 +GHs +++++f+p +++ +++++D++++iWd tr|C3Z7P2|C3Z7P2_BRAFL 177 PTSGHSRrIYAIKFHPTDNYMfITAGWDNSLKIWD 211 568**557************6369**********9 PP >> tr|C3XVC5|C3XVC5_BRAFL Coronin OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_127249 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 19.8 0.1 1.6e-05 0.0016 9 37 .. 4 34 .. 1 35 [. 0.89 2 ? 10.0 0.0 0.02 2.1 13 38 .] 60 86 .. 47 86 .. 0.76 3 ? 5.3 0.0 0.6 63 8 38 .] 97 138 .. 90 138 .. 0.71 4 ! 11.8 0.1 0.0056 0.58 3 38 .] 144 180 .. 142 180 .. 0.85 Alignments for each domain: == domain 1 score: 19.8 bits; conditional E-value: 1.6e-05 SS.SSEEEEEEETTSSEE.EEEETTSEEEEE CS WD40 9 GH.ssvtslafspdgawl.asGsdDgtvriW 37 GH v ++++sp + + as+s+D t+++W tr|C3XVC5|C3XVC5_BRAFL 4 GHrAAVLDIQWSPFDDTIiASCSEDMTIKVW 34 99888************72589********* PP == domain 2 score: 10.0 bits; conditional E-value: 0.02 EEEEEEETTSSEEE..EEETTSEEEEEE CS WD40 13 vtslafspdgawla..sGsdDgtvriWd 38 v +a++p+ + ++ +Gs D+ v iW+ tr|C3XVC5|C3XVC5_BRAFL 60 VGFIAWHPSAHNILmsAGS-DNFVVIWN 86 6678899999996443678.*******8 PP == domain 3 score: 5.3 bits; conditional E-value: 0.6 ESSSSE.EEEE.............EETTSSEEEEEETTSEEEEEE CS WD40 8 tGHssv.tsla.............fspdgawlasGsdDgtvriWd 38 + H+++ +s+ fsp ++ +Gs D+ v iW+ tr|C3XVC5|C3XVC5_BRAFL 97 ECHTDIlWSCGwnfnmfyymempnFSPMSPR--AGS-DNFVVIWN 138 5675655666666666666667778888888..5**.*******8 PP == domain 4 score: 11.8 bits; conditional E-value: 0.0056 EEEEEESSSSE.EEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGHssv.tslafspdgawlasGsdDgtvriWd 38 +l ++ H+++ +s+ ++ +g+ +++ ++D+t+r+ d tr|C3XVC5|C3XVC5_BRAFL 144 PLSLIECHTDIlWSCGWNYNGTRIVTTCKDKTLRVID 180 5556679*8877*************9999*****965 PP >> tr|C3ZI68|C3ZI68_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_114765 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.4 0.2 2.5 2.6e+02 18 38 .] 130 151 .. 86 151 .. 0.71 2 ! 23.8 0.0 8.8e-07 9.1e-05 9 38 .] 164 195 .. 154 195 .. 0.84 3 ? 10.4 0.6 0.015 1.6 2 35 .. 201 236 .. 200 239 .. 0.69 4 ! 11.0 0.0 0.0095 0.99 4 36 .. 278 312 .. 276 312 .. 0.90 Alignments for each domain: == domain 1 score: 3.4 bits; conditional E-value: 2.5 EETTSSE..EEEEETTSEEEEEE CS WD40 18 fspdgaw..lasGsdDgtvriWd 38 ++p+++ +a++ D t+r Wd tr|C3ZI68|C3ZI68_BRAFL 130 WNPHHNCtqMATAN-DTTIRGWD 151 44444445577777.99999998 PP == domain 2 score: 23.8 bits; conditional E-value: 8.8e-07 SSSS.EEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 9 GHss.vtslafspdgaw.lasGsdDgtvriWd 38 +H+ v+ l+f+p++++ l+s++dD++v++Wd tr|C3ZI68|C3ZI68_BRAFL 164 AHGQlVRELDFNPNKQYyLVSCGDDCNVKFWD 195 78446999*********9999*9********9 PP == domain 3 score: 10.4 bits; conditional E-value: 0.015 EEEEEEESSSS.EEEEE.EETTSSEEEEEETTSEEE CS WD40 2 qclrtltGHss.vtsla.fspdgawlasGsdDgtvr 35 +++ tl+ Hs+ v+s++ ++ + ++++++s D v tr|C3ZI68|C3ZI68_BRAFL 201 EPVLTLSEHSHwVWSVRyNHFHDQLVLTSSSDSRVI 236 578999***666*****5444444455665598876 PP == domain 4 score: 11.0 bits; conditional E-value: 0.0095 EEEEESS.SSEEEEEEETTSSEEEEE.ETTSEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasG.sdDgtvri 36 ++t++ H +sv++ +s +wl+++ s+Dg + i tr|C3ZI68|C3ZI68_BRAFL 278 IGTYEEHeDSVYAAEWSTADPWLFASlSYDGRLVI 312 6799***999*************999999*99865 PP >> tr|C3XPS5|C3XPS5_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_268583 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 2.5 0.0 4.6 4.8e+02 17 28 .. 14 26 .. 8 32 .. 0.80 2 ? 8.8 0.0 0.048 5 14 31 .. 46 69 .. 36 77 .. 0.76 3 ? 5.0 0.0 0.75 78 12 27 .. 93 108 .. 79 120 .. 0.74 4 ! 17.1 0.0 0.00011 0.012 1 36 [. 211 249 .. 211 251 .. 0.89 5 ? 3.0 0.0 3.3 3.4e+02 15 27 .. 329 342 .. 319 350 .. 0.81 Alignments for each domain: == domain 1 score: 2.5 bits; conditional E-value: 4.6 E.EETTSSEEEEE CS WD40 17 a.fspdgawlasG 28 + fsp+g++la + tr|C3XPS5|C3XPS5_BRAFL 14 ClFSPNGKYLANC 26 44*******9855 PP == domain 2 score: 8.8 bits; conditional E-value: 0.048 EEEE......EETTSSEEEEEETT CS WD40 14 tsla......fspdgawlasGsdD 31 t+l+ +spd++++++G+++ tr|C3XPS5|C3XPS5_BRAFL 46 TCLDavqhimWSPDSQFILCGMYK 69 5666666666*********99754 PP == domain 3 score: 5.0 bits; conditional E-value: 0.75 SEEEEEEETTSSEEEE CS WD40 12 svtslafspdgawlas 27 + s+++spd++ +++ tr|C3XPS5|C3XPS5_BRAFL 93 GLESVCWSPDSRHILT 108 4789********9986 PP == domain 4 score: 17.1 bits; conditional E-value: 0.00011 TEEEEEEESSSS...EEEEEEETTSSEEEEEETTSEEEE CS WD40 1 gqclrtltGHss...vtslafspdgawlasGsdDgtvri 36 g+cl ++++ + + s+++sp++++la Gs D +vr+ tr|C3XPS5|C3XPS5_BRAFL 211 GRCLSSYSAYEWalgIKSVSWSPSSQFLAVGSFDEKVRL 249 689999998855688*****************9*99997 PP == domain 5 score: 3.0 bits; conditional E-value: 3.3 EEE.EETTSSEEEE CS WD40 15 sla.fspdgawlas 27 sla fspd+++la+ tr|C3XPS5|C3XPS5_BRAFL 329 SLAvFSPDSKYLAT 342 6668*******986 PP >> tr|C3ZQX4|C3ZQX4_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_87476 PE=4 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.9 0.0 6.5e-05 0.0068 4 38 .] 1694 1729 .. 1691 1729 .. 0.82 2 ? 8.3 0.3 0.072 7.5 3 38 .] 1742 1776 .. 1740 1776 .. 0.86 3 ! 12.8 0.1 0.0026 0.28 4 31 .. 1826 1858 .. 1823 1863 .. 0.71 4 ? 7.2 0.0 0.15 16 4 37 .. 1872 1905 .. 1869 1906 .. 0.81 Alignments for each domain: == domain 1 score: 17.9 bits; conditional E-value: 6.5e-05 EEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtsla.fspdgawlasGsdDgtvriWd 38 l+t+ GH +sv+sl + ++a+ +s+s+D+tv++W+ tr|C3ZQX4|C3ZQX4_BRAFL 1694 LQTFHGHsNSVRSLYiMDMENAF-MSASKDKTVKLWS 1729 899****9999999755556666.589*********5 PP == domain 2 score: 8.3 bits; conditional E-value: 0.072 EEEEEESS.SSEEEEEEETTSSE.....EEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw.....lasGsdDgtvriWd 38 c +t+t H +sv ++ + la+++ D +v++Wd tr|C3ZQX4|C3ZQX4_BRAFL 1742 CRWTYTQHrKSVFHV------GMveplrLAASC-DTNVHLWD 1776 7889********999......665777788888.*******9 PP == domain 3 score: 12.8 bits; conditional E-value: 0.0026 EEEEE...SSSS...EEEEEEETTSSEEEEE.ETT CS WD40 4 lrtlt...GHss...vtslafspdgawlasG.sdD 31 +++++ G+ s +++l++sp+g+w+a G s tr|C3ZQX4|C3ZQX4_BRAFL 1826 QHEFRvtgGQ-SmglIRCLCVSPSGTWVAVGfS-S 1858 5666533255.46789************99943.5 PP == domain 4 score: 7.2 bits; conditional E-value: 0.15 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 ++ +++H + + ++ ++++++ s+s D+++ +W tr|C3ZQX4|C3ZQX4_BRAFL 1872 IKMWRAHeGEILQMKAYDNNSFI-SSSVDHNIVLW 1905 56678997779999999999998.6788******* PP >> tr|C3Z2G5|C3Z2G5_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_203393 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 14.0 0.1 0.0011 0.12 13 38 .] 36 60 .. 25 60 .. 0.84 2 ! 20.5 1.0 9.5e-06 0.00099 7 38 .] 70 102 .. 66 102 .. 0.90 3 ? 2.1 0.0 6.1 6.4e+02 8 37 .. 200 232 .. 191 233 .. 0.72 4 ? 9.7 0.0 0.024 2.5 16 37 .. 264 286 .. 253 287 .. 0.89 5 ? 3.1 0.2 3.1 3.2e+02 2 37 .. 292 328 .. 291 328 .. 0.83 Alignments for each domain: == domain 1 score: 14.0 bits; conditional E-value: 0.0011 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 +t+ af++ g++la G+ Dg + iWd tr|C3Z2G5|C3Z2G5_BRAFL 36 ITC-AFNRRGTLLAVGCNDGRIVIWD 60 444.4********************9 PP == domain 2 score: 20.5 bits; conditional E-value: 9.5e-06 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +H +v+s+++s+dg l+s+s D++v iWd tr|C3Z2G5|C3Z2G5_BRAFL 70 VNAHvHPVCSVSWSRDGYKLLSASTDNNVTIWD 102 5678668****************99*******9 PP == domain 3 score: 2.1 bits; conditional E-value: 6.1 ESS.SS..EEEEEEETTSSEEEEEETTSEEEEE CS WD40 8 tGH.ss..vtslafspdgawlasGsdDgtvriW 37 tG + + s+ f + g+ ++ + D+ +r++ tr|C3Z2G5|C3Z2G5_BRAFL 200 TGTsNTtaIKSIEFARRGNTFLVNTADRIIRVY 232 45532356899999999999775555*****98 PP == domain 4 score: 9.7 bits; conditional E-value: 0.024 EEEETTSSEEEEEE.TTSEEEEE CS WD40 16 lafspdgawlasGs.dDgtvriW 37 ++fs dg ++++Gs + + ++iW tr|C3Z2G5|C3Z2G5_BRAFL 264 CCFSGDGEYIVAGSaRQHALYIW 286 78***********857******* PP == domain 5 score: 3.1 bits; conditional E-value: 3.1 EEEEEEESS.SS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ss.vtslafspdgawlasGsdDgtvriW 37 +++++l G + ++ ++p + +as s g v +W tr|C3Z2G5|C3Z2G5_BRAFL 292 NLVKILHGTrGElLLDVVWHPVRPIIASVS-SGVVSVW 328 677888888655558999********9999.******9 PP >> tr|C3Z236|C3Z236_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_105050 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 7.6 0.0 0.12 12 6 38 .] 2 34 .. 1 34 [. 0.92 2 ? 10.1 0.0 0.018 1.9 9 38 .] 70 98 .. 40 98 .. 0.83 3 ? 7.0 0.0 0.17 18 5 35 .. 106 141 .. 102 142 .. 0.67 4 ! 14.1 0.1 0.001 0.11 9 37 .. 181 210 .. 172 211 .. 0.87 5 ? 7.5 0.2 0.13 13 3 27 .. 217 240 .. 215 243 .] 0.71 Alignments for each domain: == domain 1 score: 7.6 bits; conditional E-value: 0.12 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 tl GH ++v +++++++ +++s s v++Wd tr|C3Z236|C3Z236_BRAFL 2 TLPGHpNNVVAVRYCSYTGLVFSVS-TYFVKVWD 34 799**99999**9999999999999.*******9 PP == domain 2 score: 10.1 bits; conditional E-value: 0.018 SSSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GHssvtslafspdgawlasGsdDgtvriWd 38 G + +++++ +++g+ l ++ +t+r+Wd tr|C3Z236|C3Z236_BRAFL 70 GETQINDIRLNRSGSRLYAAA-GNTIRVWD 98 334499999*********999.*******9 PP == domain 3 score: 7.0 bits; conditional E-value: 0.17 EEEE.SSSS.EEEEE...EETTSSEEEEEETTSEEE CS WD40 5 rtlt.GHss.vtsla...fspdgawlasGsdDgtvr 35 ++lt GHs v +a +d + ++sGs+D+ ++ tr|C3Z236|C3Z236_BRAFL 106 GKLTgGHSAaVMVMAtedQEHDTPIVVSGSKDHYIK 141 5555577334443334455889999********998 PP == domain 4 score: 14.1 bits; conditional E-value: 0.001 SS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriW 37 +H +++++l+f p ++l+sG++ g +++W tr|C3Z236|C3Z236_BRAFL 181 AHkDWICALDFVPGRQMLLSGCRAGQLKVW 210 89666************************* PP == domain 5 score: 7.5 bits; conditional E-value: 0.13 EEEEEESS.SSEEEEEEETTSSEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlas 27 ++++ +GH s++++++ ++++ + + tr|C3Z236|C3Z236_BRAFL 217 LVGEVKGHdSPINAICSNSSHIF--T 240 678899**888****66555544..4 PP >> tr|C3XS02|C3XS02_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_119862 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.9 0.0 0.00013 0.014 2 38 .] 1832 1872 .. 1831 1872 .. 0.78 2 ? 5.8 0.1 0.44 46 2 36 .. 1916 1954 .. 1915 1959 .. 0.83 3 ? 7.3 0.0 0.14 15 3 34 .. 1962 1992 .. 1960 1994 .. 0.85 4 ? 10.1 0.0 0.019 1.9 1 37 [. 2000 2035 .. 2000 2036 .. 0.84 5 ? 2.4 0.0 5.1 5.3e+02 2 34 .. 2041 2072 .. 2040 2073 .. 0.85 Alignments for each domain: == domain 1 score: 16.9 bits; conditional E-value: 0.00013 EEEEEEESSSS.EEEEE...EETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGHss.vtsla...fspdgawlasGsdDgtvriWd 38 +c+++++GH+ +++l+ + l +Gs D+tvr ++ tr|C3XS02|C3XS02_BRAFL 1832 ECVQVYKGHNRkINCLQvvkSQGGEERLYTGSSDKTVRCYN 1872 8********667****655444444449***99*****987 PP == domain 2 score: 5.8 bits; conditional E-value: 0.44 EEEEEEESSSS..EEEEEEETTSSE..EEEEETTSEEEE CS WD40 2 qclrtltGHss..vtslafspdgaw..lasGsdDgtvri 36 +c+ +++ H++ ++++ + ++g+ l+ Gs+D t+ i tr|C3XS02|C3XS02_BRAFL 1916 KCVDKFDCHTPraISCITTGKEGPRrlLLVGSYDATISI 1954 8999*****7778****8888888898667*******98 PP == domain 3 score: 7.3 bits; conditional E-value: 0.14 EEEEEESS.SS......EEEEEEETTSSEEEEEETTSEE CS WD40 3 clrtltGH.ss......vtslafspdgawlasGsdDgtv 34 +l+tltGH + v++l + sGs D v tr|C3XS02|C3XS02_BRAFL 1962 LLKTLTGHsKTplcmqvVNHL--------VYSGSADTMV 1992 689*****7447****88***........99**999887 PP == domain 4 score: 10.1 bits; conditional E-value: 0.019 TEEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGHss.vtslafspdgawlasGsdDgtvriW 37 g+++++++GHs+ vt++ + g+ ++++s D+ vr++ tr|C3XS02|C3XS02_BRAFL 2000 GELQGIYKGHSHaVTGI--HVVGKVMITASLDRLVRVF 2035 57899*****7789999..667777889999*****97 PP == domain 5 score: 2.4 bits; conditional E-value: 5.1 EEEEEEESSSS.EEEEEEETTSSEEEEEETTSEE CS WD40 2 qclrtltGHss.vtslafspdgawlasGsdDgtv 34 ++l+++ G+++ + +l+++++ ++ G++Dg++ tr|C3XS02|C3XS02_BRAFL 2041 EKLQVYGGQKDmIMCLKVHKSMVYV--GCYDGSL 2072 57899****899****999888885..9889986 PP >> tr|C3Z1P0|C3Z1P0_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_113873 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 4.0 0.1 1.6 1.6e+02 13 37 .. 7 30 .. 2 31 .. 0.74 2 ! 16.1 0.0 0.00023 0.024 6 38 .] 154 188 .. 150 188 .. 0.89 3 ! 17.8 0.1 6.7e-05 0.007 4 37 .. 195 231 .. 192 231 .. 0.80 4 ? 2.3 0.0 5.5 5.8e+02 15 34 .. 271 290 .. 260 293 .. 0.84 Alignments for each domain: == domain 1 score: 4.0 bits; conditional E-value: 1.6 EEEEEEETTSSEEEEEETTSEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriW 37 ++sl+f++d+ +++++ D r++ tr|C3Z1P0|C3Z1P0_BRAFL 7 INSLRFNQDHGCFTCAM-DDGFRLY 30 7***********97666.6666665 PP == domain 2 score: 16.1 bits; conditional E-value: 0.00023 EEESS.SSEEEEEEETTSSEEEEEE.TTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGs.dDgtvriWd 38 tlt+H s + ++a+++ g+ las+s + +riWd tr|C3Z1P0|C3Z1P0_BRAFL 154 TLTAHqSEIACIAVNQQGTKLASASrKGTLIRIWD 188 799**777**************9994599999998 PP == domain 3 score: 17.8 bits; conditional E-value: 6.7e-05 EEEEE.SSSS..EEEEEEETTSSEEEEEETTSEEEEE CS WD40 4 lrtlt.GHss..vtslafspdgawlasGsdDgtvriW 37 l++l+ G ++ +++ fs+d+++l+++sd+gt++i+ tr|C3Z1P0|C3Z1P0_BRAFL 195 LHELRrGSDPatLYCITFSHDSSYLCASSDKGTIHIF 231 56664466335589************99******995 PP == domain 4 score: 2.3 bits; conditional E-value: 5.5 EEE.EETTSSEEEEEETTSEE CS WD40 15 sla.fspdgawlasGsdDgtv 34 +++ f p+++ +a + Dgt tr|C3Z1P0|C3Z1P0_BRAFL 271 CICaFGPNSSVIAICV-DGTF 290 45569*******9999.9996 PP >> tr|C3YG74|C3YG74_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_126754 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 7.6 0.4 0.11 12 8 35 .. 171 200 .. 167 203 .. 0.78 2 ? 3.2 0.0 2.8 3e+02 7 38 .] 215 252 .. 209 252 .. 0.72 3 ! 19.3 0.2 2.3e-05 0.0024 1 38 [] 256 296 .. 256 296 .. 0.90 4 ! 17.2 0.0 0.00011 0.011 2 38 .] 436 474 .. 435 474 .. 0.88 Alignments for each domain: == domain 1 score: 7.6 bits; conditional E-value: 0.11 ESSSS.EEEEEEETTSSE.EEEEETTSEEE CS WD40 8 tGHss.vtslafspdgaw.lasGsdDgtvr 35 + H++ v++++f + ++ l s+s Dgt+r tr|C3YG74|C3YG74_BRAFL 171 KCHTDiVSGVKFAHTNPSmLYSSSLDGTIR 200 6896647***98777777356999*****9 PP == domain 2 score: 3.2 bits; conditional E-value: 2.8 EESS.SS.EEEEEEETTSSEEEEEE.T....TSEEEEEE CS WD40 7 ltGH.ss.vtslafspdgawlasGs.d....DgtvriWd 38 l+G ++ tsl+++ d + ++ G+ D +v +Wd tr|C3YG74|C3YG74_BRAFL 215 LKGYeGDqFTSLDVNCDDTVVC-GGcQkrmpDTNVTLWD 252 5555433468999999999975.65336789*******9 PP == domain 3 score: 19.3 bits; conditional E-value: 2.3e-05 TEEEEEEE.SS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 1 gqclrtlt.GH.ssvtslafspdgaw.lasGsdDgtvriWd 38 gq ++t+ H +++t ++f+p+ + lasGs Dg + i+d tr|C3YG74|C3YG74_BRAFL 256 GQIVHTYPdSHsDDITQVKFHPSLPHrLASGSTDGLISIFD 296 68899996599666************99***********98 PP == domain 4 score: 17.2 bits; conditional E-value: 0.00011 EEEEEEE.SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtlt.GH.ssvtslafspdgawlasGsdDgtvriWd 38 ++l++l GH s +++l +++ l++G +Dg + +W+ tr|C3YG74|C3YG74_BRAFL 436 KPLYSLGdGHlSTIRCLYWQDKTESLVTGAEDGLLCLWK 474 57778745**999****99999999*************6 PP >> tr|C3YFV7|C3YFV7_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_222468 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.9 0.0 1.8 1.8e+02 15 37 .. 122 143 .. 112 143 .. 0.76 2 ? 8.4 0.1 0.066 6.8 8 36 .. 243 275 .. 236 277 .. 0.71 3 ? 8.1 0.1 0.08 8.4 13 36 .. 333 356 .. 317 356 .. 0.84 4 ? 9.1 0.0 0.039 4 3 23 .. 368 389 .. 366 408 .. 0.77 5 ! 20.5 0.3 9.8e-06 0.001 6 38 .] 487 521 .. 484 521 .. 0.88 Alignments for each domain: == domain 1 score: 3.9 bits; conditional E-value: 1.8 EEEEETTSSEEEEEETTSEEEEE CS WD40 15 slafspdgawlasGsdDgtvriW 37 ++ + g+++ +G+ +gtv +W tr|C3YFV7|C3YFV7_BRAFL 122 CFVHNERGDLI-TGDSNGTVFVW 143 55556667776.8*66******* PP == domain 2 score: 8.4 bits; conditional E-value: 0.066 ESS.SSEEEEE....EETTSSEEEEEETTSEEEE CS WD40 8 tGH.ssvtsla....fspdgawlasGsdDgtvri 36 GH ++v +++ g+++++G Dgtv + tr|C3YFV7|C3YFV7_BRAFL 243 QGHfDDVKAICpqpsHAAPGQFVTAGN-DGTVCM 275 59*888*****5555555555576555.****87 PP == domain 3 score: 8.1 bits; conditional E-value: 0.08 EEEEEEETTSSEEEEEETTSEEEE CS WD40 13 vtslafspdgawlasGsdDgtvri 36 +t ++ +pdg+ +a G+ Dg+v i tr|C3YFV7|C3YFV7_BRAFL 333 ITVIKICPDGDRIAIGCQDGSVQI 356 788899***************976 PP == domain 4 score: 9.1 bits; conditional E-value: 0.039 EEEEEESS.SSEEEEEEETTSS CS WD40 3 clrtltGH.ssvtslafspdga 23 +l++++GH + +t+l++s d + tr|C3YFV7|C3YFV7_BRAFL 368 LLGKCKGHkGAITGLDWSADLP 389 68899***666****9888755 PP == domain 5 score: 20.5 bits; conditional E-value: 9.8e-06 EEESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 t++ H s v++l+f +d+ l+ +G++D ++ +W+ tr|C3YFV7|C3YFV7_BRAFL 487 TYKCHsSQVSCLRFLHDNVHLVtAGGKDTSILLWK 521 899**666************984679********6 PP >> tr|C3Z3W0|C3Z3W0_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_99764 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 12.9 0.0 0.0024 0.26 6 38 .] 84 110 .. 80 110 .. 0.77 2 ? 1.9 0.0 7.1 7.3e+02 3 29 .. 116 141 .. 114 147 .. 0.65 3 ! 25.3 0.8 3e-07 3.2e-05 2 38 .] 204 239 .. 203 239 .. 0.81 Alignments for each domain: == domain 1 score: 12.9 bits; conditional E-value: 0.0024 EEESS.SSE.EEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssv.tslafspdgawlasGsdDgtvriWd 38 +l++H v l l+sGs Dg +++Wd tr|C3Z3W0|C3Z3W0_BRAFL 84 SLSAHyVKVqKRL--------LLSGSADGQLHFWD 110 6778844455566........99***********9 PP == domain 2 score: 1.9 bits; conditional E-value: 7.1 EEEEEESS.SSEEEEEEETTSSE....EEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw....lasGs 29 +l ++ H ++v+s+ a+ +++Gs tr|C3Z3W0|C3Z3W0_BRAFL 116 PLAIIQPHdGPVNSV------ALagrrFLTGS 141 67777889778**99......44333344565 PP == domain 3 score: 25.3 bits; conditional E-value: 3e-07 EEEEEEESS.SSEEEEEEETTSSE....EEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw....lasGsdDgtvriWd 38 +clr+l GH ++++ + + ++s+sdDg +r+Wd tr|C3Z3W0|C3Z3W0_BRAFL 204 TCLRSLHGHkGPIRQV------KTllhhVVSCSDDGFIRLWD 239 69*******7778888......443454689**********9 PP >> tr|C3Y3Z9|C3Y3Z9_BRAFL Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B OS=Branchiostoma floridae # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 7.7 0.0 0.11 11 13 37 .. 14 38 .. 5 39 .. 0.83 2 ? 6.4 0.0 0.28 29 24 38 .] 91 107 .. 58 107 .. 0.67 3 ? 8.8 0.1 0.049 5.1 9 37 .. 159 187 .. 151 188 .. 0.80 4 ? 2.3 0.0 5.3 5.5e+02 19 36 .. 219 237 .. 205 239 .. 0.69 5 ! 11.4 0.2 0.0071 0.74 11 38 .] 270 296 .. 261 296 .. 0.89 Alignments for each domain: == domain 1 score: 7.7 bits; conditional E-value: 0.11 EEEEEEETTSSEEEEEETTSEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriW 37 ++ + f++dg +la+G++ g v i+ tr|C3Y3Z9|C3Y3Z9_BRAFL 14 ISTVEFNQDGELLATGDKGGRVVIF 38 68999***********999988886 PP == domain 2 score: 6.4 bits; conditional E-value: 0.28 E...EEEEETTSEEEEEE CS WD40 24 w...lasGsdDgtvriWd 38 l+s D+tv++W+ tr|C3Y3Z9|C3Y3Z9_BRAFL 91 AaysLLSTN-DKTVKLWK 107 344566556.*******6 PP == domain 3 score: 8.8 bits; conditional E-value: 0.049 SS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriW 37 +H +++s++ ++d+ ++sG+ D + +W tr|C3Y3Z9|C3Y3Z9_BRAFL 159 AHtYHINSISLNSDHETFLSGD-DLRINLW 187 67555*****999999999888.******9 PP == domain 4 score: 2.3 bits; conditional E-value: 5.3 ETTSSE..EEEEETTSEEEE CS WD40 19 spdgaw..lasGsdDgtvri 36 +p+ + s+s +gt+r+ tr|C3Y3Z9|C3Y3Z9_BRAFL 219 HPSMCNvfVYSSS-KGTIRL 237 4444442166999.*****8 PP == domain 5 score: 11.4 bits; conditional E-value: 0.0071 SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriWd 38 ss+++++fs++g++l+ + d +v++Wd tr|C3Y3Z9|C3Y3Z9_BRAFL 270 SSISDVKFSHSGRYLI-SRDYLSVKVWD 296 46999**********9.799*******9 PP >> tr|C3YAX3|C3YAX3_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_131977 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 21.1 0.1 6.1e-06 0.00064 5 38 .] 304 338 .. 299 338 .. 0.89 2 ! 19.8 0.2 1.6e-05 0.0017 3 38 .] 343 380 .. 341 380 .. 0.81 Alignments for each domain: == domain 1 score: 21.1 bits; conditional E-value: 6.1e-06 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++l++H +++t+++fs++ ++l+++s D v++W+ tr|C3YAX3|C3YAX3_BRAFL 304 KILRAHkTFITGCQFSQHAKLLVTSSHDFEVKVWS 338 5699**888**************9999*******5 PP == domain 2 score: 19.8 bits; conditional E-value: 1.6e-05 EEEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtsla.fspdgawlasGsdDgtvriWd 38 ++++++GH svt l + +a+++++s Dgtv++W+ tr|C3YAX3|C3YAX3_BRAFL 343 LVHVFRGHsRSVTQLVlHPATSALVLTSSLDGTVKMWS 380 69******655****96666666677999********5 PP >> tr|C3Z6R5|C3Z6R5_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_118965 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 12.8 0.2 0.0026 0.27 3 37 .. 42 92 .. 40 93 .. 0.85 2 ? 6.4 0.0 0.28 29 10 34 .. 106 131 .. 98 133 .. 0.77 3 ? 9.0 0.0 0.041 4.3 3 37 .. 141 186 .. 139 186 .. 0.86 4 ? 2.9 0.0 3.5 3.6e+02 7 37 .. 296 326 .. 291 327 .. 0.81 5 ? 2.9 0.0 3.5 3.6e+02 7 37 .. 372 402 .. 367 403 .. 0.81 Alignments for each domain: == domain 1 score: 12.8 bits; conditional E-value: 0.0026 EEEEEESS..SSEEEEE..............EETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGH..ssvtsla..............fspdgawlasGsdDgtvriW 37 ++r +GH +s t++a + +++++++G Dgtvr++ tr|C3Z6R5|C3Z6R5_BRAFL 42 NIRLVSGHgsKSCTCVAfssrahppptrvgsDDVSSTYMVAGYSDGTVRMF 92 677789**8666****9999999999999999999999999*55*****86 PP == domain 2 score: 6.4 bits; conditional E-value: 0.28 S.SSEEEEEEETTSSEEEEEETTSEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtv 34 H +t++ f dg+ ++sG Dg + tr|C3Z6R5|C3Z6R5_BRAFL 106 HaVAITAVTFAADGRAILSGASDGLI 131 44449***************55*976 PP == domain 3 score: 9.0 bits; conditional E-value: 0.041 EEEEEESSSS..EEEEE..EETTSSE........EEEEETTSEEEEE CS WD40 3 clrtltGHss..vtsla..fspdgaw........lasGsdDgtvriW 37 +lr+l H++ +t+++ f +d+++ la++ D+ v +W tr|C3Z6R5|C3Z6R5_BRAFL 141 TLRILNDHKGapITAMDtiFKQDKDYgvtapilwLATSA-DRRVSVW 186 689999994446****99999999999999999899888.******* PP == domain 4 score: 2.9 bits; conditional E-value: 3.5 EESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriW 37 + +H + v+ ++f p+g++l++ + +++W tr|C3Z6R5|C3Z6R5_BRAFL 296 FVAHcDAVHLVRFTPSGKLLFTVA-HNEIMVW 326 678955598888********9988.8888888 PP == domain 5 score: 2.9 bits; conditional E-value: 3.5 EESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriW 37 + +H + v+ ++f p+g++l++ + +++W tr|C3Z6R5|C3Z6R5_BRAFL 372 FVAHcDAVHLVRFTPSGKLLFTVA-HNEIMVW 402 678955598888********9988.8888888 PP >> tr|C3ZC78|C3ZC78_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_121091 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 2.7 0.0 4 4.2e+02 15 37 .. 66 87 .. 52 88 .. 0.76 2 ! 17.8 0.5 7e-05 0.0073 9 38 .] 104 134 .. 98 134 .. 0.84 3 ! 18.0 0.1 6.1e-05 0.0064 4 38 .] 141 177 .. 140 177 .. 0.85 4 ? 2.4 0.0 5.1 5.3e+02 13 23 .. 195 206 .. 186 217 .. 0.81 Alignments for each domain: == domain 1 score: 2.7 bits; conditional E-value: 4 EEEEETTSSEEEEEETTSEEEEE CS WD40 15 slafspdgawlasGsdDgtvriW 37 +l+ d+++++ +sd g v +W tr|C3ZC78|C3ZC78_BRAFL 66 DLQLVNDNQLIV-ASDSGAVEMW 87 566667888888.577******9 PP == domain 2 score: 17.8 bits; conditional E-value: 7e-05 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 +H s + +++ pd + +sG+ D t++iWd tr|C3ZC78|C3ZC78_BRAFL 104 AHdSTAHTISVAPDTNTAVSGGADATIKIWD 134 57444677888******99***********9 PP == domain 3 score: 18.0 bits; conditional E-value: 6.1e-05 EEEEESS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawl.asGsdDgtvriWd 38 ++tl++H + +++++ +p + + +s+ Dg +Wd tr|C3ZC78|C3ZC78_BRAFL 141 MKTLKAHtDTIWCICCNPMDKHVfLSCAQDGRALMWD 177 589****666*****88888886269**********9 PP == domain 4 score: 2.4 bits; conditional E-value: 5.1 E.EEEEEETTSS CS WD40 13 v.tslafspdga 23 v t++ +sp+ + tr|C3ZC78|C3ZC78_BRAFL 195 VpTCITWSPNRQ 206 779******976 PP >> tr|C3YA29|C3YA29_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_115356 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.7 0.0 1.9 2e+02 13 38 .] 251 286 .. 236 286 .. 0.84 2 ? 2.3 0.0 5.6 5.9e+02 13 38 .] 304 330 .. 291 330 .. 0.60 3 ? 3.6 0.2 2.1 2.2e+02 9 37 .. 348 379 .. 339 380 .. 0.68 4 ? 2.1 0.0 6.2 6.5e+02 10 22 .. 395 412 .. 387 426 .. 0.75 5 ! 16.7 0.4 0.00015 0.016 6 38 .] 440 479 .. 437 479 .. 0.83 6 ! 12.5 0.2 0.0031 0.33 13 38 .] 542 567 .. 532 567 .. 0.91 Alignments for each domain: == domain 1 score: 3.7 bits; conditional E-value: 1.9 EEEEEEETTSSEEEEEET..........TSEEEEEE CS WD40 13 vtslafspdgawlasGsd..........DgtvriWd 38 vt+l++s + l+ +s+ Dg + +W+ tr|C3YA29|C3YA29_BRAFL 251 VTHLDWSAQYPELLVASYnnneespnepDGVCLVWN 286 99**999999998888866788999999*******8 PP == domain 2 score: 2.3 bits; conditional E-value: 5.6 EEEEEEETTSSEEEEE.ETTSEEEEEE CS WD40 13 vtslafspdgawlasG.sdDgtvriWd 38 v + + + ++ l+ G ++ g + +Wd tr|C3YA29|C3YA29_BRAFL 304 VMAATYAKFHPNLVVGgTYSGQIVLWD 330 5444444444446656258*******9 PP == domain 3 score: 3.6 bits; conditional E-value: 2.1 SS.SSEEEEE..EETTSSEEEEEETTSEEEEE CS WD40 9 GH.ssvtsla..fspdgawlasGsdDgtvriW 37 +H +v++++ ++ + l++ s Dg+ W tr|C3YA29|C3YA29_BRAFL 348 AHtHPVYCVDviGTQNAHNLITVSTDGKMCSW 379 56336****98844444445566669998888 PP == domain 4 score: 2.1 bits; conditional E-value: 6.2 S.SS....EEEEEEETTS CS WD40 10 H.ss....vtslafspdg 22 H +s vt+++f+p+ tr|C3YA29|C3YA29_BRAFL 395 HkQSkavaVTCMSFPPND 412 653457779****99996 PP == domain 5 score: 16.7 bits; conditional E-value: 0.00015 EEESS.SSEEEEE.......EETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtsla.......fspdgawlasGsdDgtvriWd 38 +++GH ++vts++ ++ ++ +l+s+ D tv++W+ tr|C3YA29|C3YA29_BRAFL 440 IFEGHqGPVTSIDchpatgqVDFSHLFLTSSF-DWTVKLWS 479 699**888*****9888888888888886555.*******5 PP == domain 6 score: 12.5 bits; conditional E-value: 0.0031 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 ++ ++++++g+ +a+G+ Dg+v i+d tr|C3YA29|C3YA29_BRAFL 542 INRVRWHSSGHQVACGDADGKVWIYD 567 899***********9999******98 PP >> tr|C3ZBB3|C3ZBB3_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_278229 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 11.9 0.0 0.005 0.52 6 37 .. 98 127 .. 94 128 .. 0.87 2 ! 12.3 0.0 0.0037 0.38 13 38 .] 147 171 .. 135 171 .. 0.87 3 ! 19.8 0.1 1.6e-05 0.0017 8 38 .] 491 522 .. 480 522 .. 0.83 4 ? 6.5 0.1 0.26 27 2 26 .. 527 552 .. 526 559 .. 0.85 Alignments for each domain: == domain 1 score: 11.9 bits; conditional E-value: 0.005 EEESSSSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 6 tltGHssvtslafspdgawlasGsdDgtvriW 37 ++ G v+++a+++ ++ +a Gs+Dg vr++ tr|C3ZBB3|C3ZBB3_BRAFL 98 SYGGA--VWCMAVNSTQSSIAVGSEDGCVRLF 127 45565..***********************97 PP == domain 2 score: 12.3 bits; conditional E-value: 0.0037 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 + sl+++ +g l++Gs ++r+Wd tr|C3ZBB3|C3ZBB3_BRAFL 147 ILSLSWHESGEVLVTGS-CDNIRVWD 171 899**************.*******9 PP == domain 3 score: 19.8 bits; conditional E-value: 1.6e-05 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 +H + +++la+s+d++w+a+++ D++v++++ tr|C3ZBB3|C3ZBB3_BRAFL 491 NAHpTTISALAVSSDSQWIAAAHLDCSVHVYN 522 378777************************97 PP == domain 4 score: 6.5 bits; conditional E-value: 0.26 EEEEEEESS.SSEEEEEEETTSSEEE CS WD40 2 qclrtltGH.ssvtslafspdgawla 26 +++ +l H s+v+++ f+p +wl+ tr|C3ZBB3|C3ZBB3_BRAFL 527 KHQCSLPKHpSPVSAMTFHPTEPWLM 552 56778889*999************96 PP >> tr|C3Y7A7|C3Y7A7_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_114714 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.8 0.0 0.011 1.2 7 37 .. 66 104 .. 60 105 .. 0.78 2 ! 23.3 0.3 1.2e-06 0.00013 3 38 .] 113 150 .. 111 150 .. 0.85 3 ? 3.0 0.1 3.3 3.5e+02 2 31 .. 196 228 .. 195 233 .. 0.76 4 ? 7.5 0.4 0.12 13 3 37 .. 273 316 .. 271 316 .. 0.67 Alignments for each domain: == domain 1 score: 10.8 bits; conditional E-value: 0.011 EESS.SSEEEEEEETTSSE.........EEEEETTSEEEEE CS WD40 7 ltGH.ssvtslafspdgaw.........lasGsdDgtvriW 37 + H + v ++a+sp + ++Gs D+++ri+ tr|C3Y7A7|C3Y7A7_BRAFL 66 F-HHgTRVDAIAWSPQTNVntlprvvrfCTAGS-DRKIRIF 104 4.3655699***************988445678.******7 PP == domain 2 score: 23.3 bits; conditional E-value: 1.2e-06 EEEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtsla.fspdgawlasGsdDgtvriWd 38 +++l+GH + v+++ + +g+ +as sdD+t+r+Wd tr|C3Y7A7|C3Y7A7_BRAFL 113 SVQVLEGHtDYVNDVVfEPTNGDQVASVSDDHTCRVWD 150 5789****555****9777778889999*********9 PP == domain 3 score: 3.0 bits; conditional E-value: 3.3 EEEEEEE.SSSSEEEEEEETTSSE...EEEEETT CS WD40 2 qclrtlt.GHssvtslafspdgaw...lasGsdD 31 q++ +l+ GH + ts ++++ ++ ++Gs D tr|C3Y7A7|C3Y7A7_BRAFL 196 QPIMSLDcGHAPLTSADWCRTDPLtvgAVAGS-D 228 67777867**99****8888887776645687.5 PP == domain 4 score: 7.5 bits; conditional E-value: 0.12 EEEEE.ESS..SS......E.EEEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtl.tGH..ss......v.tslafspdgawlasGsdDgtvriW 37 +++++ +GH ++ v +l+++ + a G+ D+ +++W tr|C3Y7A7|C3Y7A7_BRAFL 273 QVKVFhKGHhqTPvsssmmVqGGLSWHARLPVCAVGG-DRVIHMW 316 566663588755544455554488677777778889*.******* PP >> tr|C3XYH7|C3XYH7_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_229150 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.6 0.0 0.013 1.3 12 38 .] 33 62 .. 18 62 .. 0.79 2 ! 23.2 0.5 1.3e-06 0.00014 9 38 .] 162 193 .. 154 193 .. 0.81 3 ? 2.4 0.1 4.9 5.1e+02 4 29 .. 204 230 .. 201 239 .. 0.67 4 ? 5.7 0.0 0.44 46 13 37 .. 317 341 .. 300 342 .. 0.79 Alignments for each domain: == domain 1 score: 10.6 bits; conditional E-value: 0.013 S..EEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 12 s..vtslafspdgawla.sGsdDgtvriWd 38 + vt + ++p+++ l+ +Gs+ g + +W+ tr|C3XYH7|C3XYH7_BRAFL 33 DrrVTVIEWHPSHPTLVaAGSKGGDIILWN 62 25688899*******863889********8 PP == domain 2 score: 23.2 bits; conditional E-value: 1.3e-06 SS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawl.asGsdDgtvriWd 38 H s vt++ f+ +wl +++s D+tv++Wd tr|C3XYH7|C3XYH7_BRAFL 162 LHkSKVTHVEFNTGCDWLlVTASTDRTVKLWD 193 48555************7358899*******9 PP == domain 3 score: 2.4 bits; conditional E-value: 4.9 EEEEESS.SSEEEEEEETTSSE.EEEEE CS WD40 4 lrtltGH.ssvtslafspdgaw.lasGs 29 l+tl+ H +++s fsp+ + l++ + tr|C3XYH7|C3XYH7_BRAFL 204 LYTLE-HdHPINSAYFSPNDHCkLLTTD 230 56664.7346*********988655554 PP == domain 4 score: 5.7 bits; conditional E-value: 0.44 EEEEE.EETTSSEEEEEETTSEEEEE CS WD40 13 vtsla.fspdgawlasGsdDgtvriW 37 + sl fsp+g l+s++ ++ iW tr|C3XYH7|C3XYH7_BRAFL 317 IKSLNkFSPSGESLVSAM-GYNILIW 341 666668*********988.******9 PP >> tr|C3ZA58|C3ZA58_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_77615 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 21.3 0.0 5.4e-06 0.00056 5 38 .] 104 148 .. 102 148 .. 0.72 2 ? 3.6 0.1 2.1 2.1e+02 10 38 .] 225 252 .. 215 252 .. 0.69 3 ? 3.2 0.2 2.9 3e+02 3 29 .. 260 285 .. 258 300 .. 0.78 4 ! 14.9 0.1 0.00058 0.06 5 37 .. 306 337 .. 302 338 .. 0.85 Alignments for each domain: == domain 1 score: 21.3 bits; conditional E-value: 5.4e-06 EEEESSSS.EE..........EEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGHss.vt..........slafspdgawlasGsdDgtvriWd 38 ++l+GH++ ++ ++++ ++ las+s+D+tvr+W+ tr|C3ZA58|C3ZA58_BRAFL 104 KSLRGHKGqIHdavylskkevCFDTANFQPILASCSEDKTVRVWN 148 5799995555533334444447778888888*************8 PP == domain 2 score: 3.6 bits; conditional E-value: 2.1 S.SSEEEEEEETTSSE....EEEEETTSEEEEEE CS WD40 10 H.ssvtslafspdgaw....lasGsdDgtvriWd 38 H +++t l +w a G ++g + iWd tr|C3ZA58|C3ZA58_BRAFL 225 HtCCITWL------PWkpnmAAIGYENGDIGIWD 252 64446666......55555435699********9 PP == domain 3 score: 3.2 bits; conditional E-value: 2.9 EEEEEESS.SSEEEEEEETTSSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGs 29 +l+t ++H + v++l s +++l+s+s tr|C3ZA58|C3ZA58_BRAFL 260 LLHTTSAHfGAVRGL--SAVHNMLVSAS 285 68999***7669999..66677788776 PP == domain 4 score: 14.9 bits; conditional E-value: 0.00058 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +t+t H ++vt++ +++++a s+sdD ++r++ tr|C3ZA58|C3ZA58_BRAFL 306 KTYTDHqGPVTGIHVDHYKAV--SCSDDFSIRVY 337 799***888****77777777..99*******98 PP >> tr|C3Z3W2|C3Z3W2_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_99766 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 25.5 0.0 2.5e-07 2.6e-05 3 38 .] 835 869 .. 833 869 .. 0.85 2 ! 11.8 0.1 0.0055 0.57 2 35 .. 874 906 .. 873 907 .. 0.85 Alignments for each domain: == domain 1 score: 25.5 bits; conditional E-value: 2.5e-07 EEEEEESS.SSEEEEEEETTSSE....EEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw....lasGsdDgtvriWd 38 ++r+l GH +sv +l a+ l++Gs+D+tvr+Wd tr|C3Z3W2|C3Z3W2_BRAFL 835 KVRKLQGHmDSVQCL------ALdkrrLMTGSMDRTVRVWD 869 6899***********......44444499***********9 PP == domain 2 score: 11.8 bits; conditional E-value: 0.0055 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvr 35 + +r+l GH ++++s+ + +++ +++Gs+D +++ tr|C3Z3W2|C3Z3W2_BRAFL 874 RSIRKLYGHkGGIRSI--HFNQTKICTGSWDMSIM 906 5689999**777****..88888899*****9986 PP >> tr|C3YA39|C3YA39_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_126377 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.3 0.1 0.034 3.5 18 38 .] 83 103 .. 63 103 .. 0.74 2 ! 17.0 0.0 0.00013 0.013 3 38 .] 111 147 .. 109 147 .. 0.92 3 ? 8.7 0.0 0.052 5.4 15 37 .. 270 292 .. 259 293 .. 0.86 Alignments for each domain: == domain 1 score: 9.3 bits; conditional E-value: 0.034 EETTSSEEEEEETTSEEEEEE CS WD40 18 fspdgawlasGsdDgtvriWd 38 s+ ++++++s Dg++++W+ tr|C3YA39|C3YA39_BRAFL 83 SSDRTDFILTASCDGHLKFWK 103 5667788998888*******6 PP == domain 2 score: 17.0 bits; conditional E-value: 0.00013 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++++ H ++v +la+s dg++ ++ sdD+ +++d tr|C3YA39|C3YA39_BRAFL 111 FVKHFRVHlGNVECLAVSTDGTMACTVSDDQAMKVFD 147 589*****999************88889***999998 PP == domain 3 score: 8.7 bits; conditional E-value: 0.052 EEEEETTSSEEEEEETTSEEEEE CS WD40 15 slafspdgawlasGsdDgtvriW 37 +lafspdg+ +a+ +D++vr++ tr|C3YA39|C3YA39_BRAFL 270 ALAFSPDGKRFATIARDRKVRVF 292 799*******986577*****97 PP >> tr|C3YFB9|C3YFB9_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_77293 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.0 0.4 0.00026 0.027 5 38 .] 100 135 .. 96 135 .. 0.80 2 ? 5.6 0.1 0.48 50 16 38 .] 155 177 .. 147 177 .. 0.72 3 ! 22.9 0.3 1.6e-06 0.00017 8 38 .] 189 221 .. 182 221 .. 0.85 4 ? 9.0 0.1 0.041 4.2 2 38 .] 275 317 .. 274 317 .. 0.74 Alignments for each domain: == domain 1 score: 16.0 bits; conditional E-value: 0.00026 EEEESSSS.EEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 5 rtltGHss.vtslafspdgaw.lasGsdDgtvriWd 38 +l+GH+ ++++++s + a +a++s D +++Wd tr|C3YFB9|C3YFB9_BRAFL 100 SVLKGHTRvISDVDWSMSDANtMATCSVDTYIYLWD 135 679***7767***75555555799***********9 PP == domain 2 score: 5.6 bits; conditional E-value: 0.48 EEEETTSSEEE.EEETTSEEEEEE CS WD40 16 lafspdgawla.sGsdDgtvriWd 38 +++++ +++l+ + + g +r+Wd tr|C3YFB9|C3YFB9_BRAFL 155 VKWNKVNSYLLaTTH-EGDIRVWD 177 456666666651556.*******9 PP == domain 3 score: 22.9 bits; conditional E-value: 1.6e-06 ESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawla.sGsdDgtvriWd 38 +H s v++l+++p + l+ s+s D+tv++Wd tr|C3YFB9|C3YFB9_BRAFL 189 AAHlSKVHGLDWDPTSEHLMaSSSQDCTVKFWD 221 589999************9626689*******9 PP == domain 4 score: 9.0 bits; conditional E-value: 0.041 EEEEEEESSSS.EEEEEEETTSSE...........EEEE.ETTSEEEEEE CS WD40 2 qclrtltGHss.vtslafspdgaw...........lasG.sdDgtvriWd 38 ++++t+ GH++ v + +w l+ s+D+++riW+ tr|C3YFB9|C3YFB9_BRAFL 275 SPIHTFVGHTDvVLEF------QWrkqnednadyqLV-TwSKDQSLRIWK 317 589******8856888......555555555555777.6699*******6 PP >> tr|C3ZSI3|C3ZSI3_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_63324 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.3 0.0 0.0001 0.01 9 37 .. 619 648 .. 609 648 .. 0.86 2 ! 18.7 0.0 3.5e-05 0.0037 12 38 .] 663 692 .. 656 692 .. 0.86 Alignments for each domain: == domain 1 score: 17.3 bits; conditional E-value: 0.0001 SS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriW 37 H + v +l++sp g+ ++sGs D+t+ri+ tr|C3ZSI3|C3ZSI3_BRAFL 619 DHvNAVLDLDYSPTGREFVSGSFDKTIRIF 648 4777799999******************96 PP == domain 2 score: 18.7 bits; conditional E-value: 3.5e-05 S...EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 s...vtslafspdgawlasGsdDgtvriWd 38 v ++++s d+++++sGsd +vriW+ tr|C3ZSI3|C3ZSI3_BRAFL 663 RmqrVFCIKWSLDNKYILSGSDETNVRIWK 692 344599***********************6 PP >> tr|C3Y077|C3Y077_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_216906 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 7.3 0.0 0.14 15 24 38 .] 80 94 .. 67 94 .. 0.85 2 ! 18.8 0.0 3.4e-05 0.0035 4 38 .] 102 143 .. 99 143 .. 0.71 3 ? 5.3 0.1 0.59 62 18 38 .] 174 194 .. 163 194 .. 0.85 4 ? 3.4 0.0 2.5 2.6e+02 19 37 .. 267 285 .. 246 286 .. 0.62 5 ? 3.1 0.0 3.1 3.2e+02 9 36 .. 319 346 .. 312 346 .. 0.75 Alignments for each domain: == domain 1 score: 7.3 bits; conditional E-value: 0.14 EEEEEETTSEEEEEE CS WD40 24 wlasGsdDgtvriWd 38 la+G+ Dg++ iWd tr|C3Y077|C3Y077_BRAFL 80 NLATGDFDGKLSIWD 94 489**99*******9 PP == domain 2 score: 18.8 bits; conditional E-value: 3.4e-05 EEEEESSSS.EEEEE......EETTSSE.....EEEEETTSEEEEEE CS WD40 4 lrtltGHss.vtsla......fspdgaw.....lasGsdDgtvriWd 38 +++ +H+ +++++ l++Gs+Dg+v++Wd tr|C3Y077|C3Y077_BRAFL 102 VYHAPAHKEiINCIDgvgglgI-----GegapeLVTGSRDGSVKVWD 143 55667896657***65555553.....04444599***********9 PP == domain 3 score: 5.3 bits; conditional E-value: 0.59 EETTSSEEEEEETTSEEEEEE CS WD40 18 fspdgawlasGsdDgtvriWd 38 +sp + +++G d+g ++++d tr|C3Y077|C3Y077_BRAFL 174 YSPTERCVCAGYDNGDIKLFD 194 8999999999*9*******98 PP == domain 4 score: 3.4 bits; conditional E-value: 2.5 ETTSSEEEEEETTSEEEEE CS WD40 19 spdgawlasGsdDgtvriW 37 +++ + +++++ gt+ +W tr|C3Y077|C3Y077_BRAFL 267 PQNRDVFMTCGGSGTLNLW 285 445555665544******* PP == domain 5 score: 3.1 bits; conditional E-value: 3.1 SSSSEEEEEEETTSSEEEEE.ETTSEEEE CS WD40 9 GHssvtslafspdgawlasG.sdDgtvri 36 ++ ++ ++++spd+ l+ + D+ +r+ tr|C3Y077|C3Y077_BRAFL 319 TQ-PIAGFDWSPDKVGLCVCtAFDQCLRV 346 44.788999*****999766334999886 PP >> tr|C3XW13|C3XW13_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_147761 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 6.6 0.0 0.24 25 8 36 .. 104 133 .. 97 133 .. 0.85 2 ! 26.5 0.1 1.2e-07 1.3e-05 9 38 .] 148 179 .. 138 179 .. 0.72 Alignments for each domain: == domain 1 score: 6.6 bits; conditional E-value: 0.24 ESS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvri 36 GH s ++a +d ++l+++++D ++ri tr|C3XW13|C3XW13_BRAFL 104 LGHlSMLLDIAIKDDDSFLITCDRDEKIRI 133 488655789999****************98 PP == domain 2 score: 26.5 bits; conditional E-value: 1.2e-07 SS.SSEEEEE..EETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtsla..fspdgawlasGsdDgtvriWd 38 GH +t+l+ pdg +l sG+ Dgtvr+Wd tr|C3XW13|C3XW13_BRAFL 148 GHtEYITALClsPYPDGVLL-SGGGDGTVRVWD 179 99666*97774466666666.6766*******9 PP >> tr|C3ZGN0|C3ZGN0_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_70984 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 2.2 0.0 5.8 6.1e+02 19 37 .. 37 53 .. 5 54 .. 0.72 2 ! 12.4 0.0 0.0035 0.36 9 37 .. 76 104 .. 63 104 .. 0.72 3 ! 19.7 0.0 1.8e-05 0.0019 7 37 .. 168 199 .. 161 199 .. 0.83 Alignments for each domain: == domain 1 score: 2.2 bits; conditional E-value: 5.8 ETTSSEEEEEETTSEEEEE CS WD40 19 spdgawlasGsdDgtvriW 37 p+ +++a s D+t++++ tr|C3ZGN0|C3ZGN0_BRAFL 37 IPNEKLVA-VS-DKTLMVF 53 46667765.79.***9997 PP == domain 2 score: 12.4 bits; conditional E-value: 0.0035 SSSS...EEEEEEETTSSEEEEEETTSEEEEE CS WD40 9 GHss...vtslafspdgawlasGsdDgtvriW 37 + + sl + +d+ + a+Gs Dgt+ +W tr|C3ZGN0|C3ZGN0_BRAFL 76 Q--HreaIQSLVNVSDSVF-ATGSLDGTIVLW 104 3..2455888877777777.89********** PP == domain 3 score: 19.7 bits; conditional E-value: 1.8e-05 EESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriW 37 +H s + ++ g++la++s Dgt+r+W tr|C3ZGN0|C3ZGN0_BRAFL 168 VAAHfSKIQHMVLLAGGSFLATCSADGTIRLW 199 558966699999999***************** PP >> tr|C3Y1H7|C3Y1H7_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_242526 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 5.4 0.0 0.57 59 11 35 .. 339 364 .. 321 367 .. 0.78 2 ? 3.3 0.2 2.6 2.8e+02 3 37 .. 379 418 .. 377 419 .. 0.72 3 ! 16.9 1.1 0.00014 0.014 2 37 .. 486 523 .. 485 524 .. 0.79 4 ? 9.3 0.1 0.033 3.4 10 38 .] 538 566 .. 529 566 .. 0.82 5 ? 2.6 0.0 4.5 4.7e+02 13 32 .. 588 606 .. 578 617 .. 0.88 Alignments for each domain: == domain 1 score: 5.4 bits; conditional E-value: 0.57 SSEEEEEEETTSSEEE.EEETTSEEE CS WD40 11 ssvtslafspdgawla.sGsdDgtvr 35 ++v +l+ +p + l+ G +Dg+v tr|C3Y1H7|C3Y1H7_BRAFL 339 TGVMCLDIHPAYPHLVaVGFYDGSVG 364 4599**********8636878**995 PP == domain 2 score: 3.3 bits; conditional E-value: 2.6 EEEEEESS.SSEEEEE.....EETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtsla.....fspdgawlasGsdDgtvriW 37 c+ + H ++v+ ++ + + ++++ G+ Dg v W tr|C3Y1H7|C3Y1H7_BRAFL 379 CTAKGGKHtDPVWEVKwqkddLDNNMNFFSIGG-DGRVVSW 418 5555556867799997666666666666889**.**99988 PP == domain 3 score: 16.9 bits; conditional E-value: 0.00014 EEEEEEESSSS..EEEEEEETTSSEE.EEEETTSEEEEE CS WD40 2 qclrtltGHss..vtslafspdgawl.asGsdDgtvriW 37 q l t+++H + v+s++++ ++ + +s+s D tv+iW tr|C3Y1H7|C3Y1H7_BRAFL 486 QFLDTFDAH-HmaVHSVRWNTFHPKIfLSCSADWTVKIW 523 567899***.555****877777775259999******* PP == domain 4 score: 9.3 bits; conditional E-value: 0.033 SSSEEEEEEETTSSEEEEE..ETTSEEEEEE CS WD40 10 HssvtslafspdgawlasG..sdDgtvriWd 38 sv ++a+ p+++ ++++ s Dg+v+++d tr|C3Y1H7|C3Y1H7_BRAFL 538 S-SVGDVAWAPYSSTVFAAvtS-DGKVHVFD 566 3.799**********9877657.******98 PP == domain 5 score: 2.6 bits; conditional E-value: 4.5 EEEEEEETTSSEEEEEETTS CS WD40 13 vtslafspdgawlasGsdDg 32 t++ f+p+ ++++ G+ D+ tr|C3Y1H7|C3Y1H7_BRAFL 588 LTHIEFNPNYPMIIVGD-DR 606 58999*******99988.75 PP >> tr|C3ZTY1|C3ZTY1_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_88996 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 5.8 0.0 0.42 44 9 36 .. 364 427 .. 358 429 .. 0.82 2 ? 7.2 0.0 0.15 16 7 38 .] 475 508 .. 471 508 .. 0.78 3 ! 21.9 0.6 3.5e-06 0.00036 7 38 .] 537 570 .. 531 570 .. 0.83 Alignments for each domain: == domain 1 score: 5.8 bits; conditional E-value: 0.42 SS.SS.EEEEEEETTSSE...................................EEEEETTSEEEE CS WD40 9 GH.ss.vtslafspdgaw...................................lasGsdDgtvri 36 +H ++ v++++++p gaw +++s Dg vr+ tr|C3ZTY1|C3ZTY1_BRAFL 364 AHkFGtVWDMKWCPTGAWdppqwnppaaqnppavqnppavqtppgvlprlgllAVACS-DGGVRV 427 695337************9999999999999999999999999999999887423678.998887 PP == domain 2 score: 7.2 bits; conditional E-value: 0.15 EESSSSEEEEEEETTSSE..EEEEETTSEEEEEE CS WD40 7 ltGHssvtslafspdgaw..lasGsdDgtvriWd 38 ++ H+ + ++pd la+G +Dgtv +Wd tr|C3ZTY1|C3ZTY1_BRAFL 475 YSEHGQCFTVVWQPDEGHrrLAAGFYDGTVGMWD 508 566644556668888888889***99*******9 PP == domain 3 score: 21.9 bits; conditional E-value: 3.5e-06 EESSSS.EEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 7 ltGHss.vtslafspdgaw.lasGsdDgtvriWd 38 + +H++ vts+ +s++++ +a+Gs D+++++Wd tr|C3ZTY1|C3ZTY1_BRAFL 537 FIAHDWvVTSVVWSQNNSRfIATGSLDRHIKFWD 570 679*7767****88888884579**********9 PP >> tr|C3YNW4|C3YNW4_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_94436 PE=4 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.9 0.0 0.011 1.1 23 38 .] 2546 2561 .. 2514 2561 .. 0.76 2 ? 4.2 0.0 1.4 1.4e+02 14 38 .] 2595 2618 .. 2587 2618 .. 0.86 3 ? 6.7 0.1 0.22 22 4 27 .. 2791 2815 .. 2788 2829 .. 0.84 4 ? 7.0 0.1 0.18 19 10 37 .. 2840 2875 .. 2832 2876 .. 0.78 5 ! 11.1 0.1 0.0088 0.92 4 38 .] 2928 2963 .. 2926 2963 .. 0.90 Alignments for each domain: == domain 1 score: 10.9 bits; conditional E-value: 0.011 SEEEEEETTSEEEEEE CS WD40 23 awlasGsdDgtvriWd 38 ++la+++ Dgtvr+W+ tr|C3YNW4|C3YNW4_BRAFL 2546 SLLATSGCDGTVRVWN 2561 34875555*******8 PP == domain 2 score: 4.2 bits; conditional E-value: 1.4 EEEEEETTSSEEEEEETTSEEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriWd 38 ++++++ +g++la+ + + v iW+ tr|C3YNW4|C3YNW4_BRAFL 2595 SHVCWNANGRLLAATM-ENMVNIWS 2618 689*********8655.*******5 PP == domain 3 score: 6.7 bits; conditional E-value: 0.22 EEEEESS.SSEEEEEEETTSSEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlas 27 ++t+++H +s+++l ++p g++la+ tr|C3YNW4|C3YNW4_BRAFL 2791 IKTIEAHeTSISGLTWDPTGHLLAT 2815 68999**999************987 PP == domain 4 score: 7.0 bits; conditional E-value: 0.18 S.SSEEEEEEETTSSE.............EEEEETTSEEEEE CS WD40 10 H.ssvtslafspdgaw.............lasGsdDgtvriW 37 H s+v ++ +w la+G+ Dg+v++W tr|C3YNW4|C3YNW4_BRAFL 2840 HaSPVAAM------DWcpllgkgdeprlmLATGCTDGSVHVW 2875 76778888......77777777777887799**99******* PP == domain 5 score: 11.1 bits; conditional E-value: 0.0088 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + +l+GH +s+ +laf+++g la+G+ g v +W+ tr|C3YNW4|C3YNW4_BRAFL 2928 VLVLKGHqTSIQHLAFHSHGMALATGCSRGVVNLWS 2963 6789***999****************7799999995 PP >> tr|C3ZCW1|C3ZCW1_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_128752 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 8.5 0.0 0.058 6.1 15 38 .] 2 25 .. 1 25 [. 0.96 2 ? 6.4 0.0 0.28 29 13 37 .. 50 74 .. 39 75 .. 0.86 3 ? 10.4 0.0 0.014 1.5 11 36 .. 94 118 .. 86 120 .. 0.86 4 ? 1.8 0.3 7.7 8e+02 7 34 .. 129 157 .. 123 158 .. 0.77 5 ? 3.5 0.0 2.2 2.3e+02 7 36 .. 174 202 .. 168 203 .. 0.76 6 ? 1.7 0.0 8.4 8.7e+02 13 29 .. 270 286 .. 263 299 .. 0.76 Alignments for each domain: == domain 1 score: 8.5 bits; conditional E-value: 0.058 EEEEETTSSEEEEEETTSEEEEEE CS WD40 15 slafspdgawlasGsdDgtvriWd 38 +l +sp++a la ++ D+ v ++d tr|C3ZCW1|C3ZCW1_BRAFL 2 CLTWSPNNAKLAVCTVDRVVLLYD 25 999******************998 PP == domain 2 score: 6.4 bits; conditional E-value: 0.28 EEEEEEETTSSEEEEE.ETTSEEEEE CS WD40 13 vtslafspdgawlasG.sdDgtvriW 37 v ++afspd+a +a G + D+ ++++ tr|C3ZCW1|C3ZCW1_BRAFL 50 VKAMAFSPDSAKIAVGqT-DNIIYVY 74 7899************66.****998 PP == domain 3 score: 10.4 bits; conditional E-value: 0.014 SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvri 36 s vt+l ++pd++ ++ G Dg++r+ tr|C3ZCW1|C3ZCW1_BRAFL 94 SAVTCLIWPPDQNIIF-GLADGKIRV 118 45*************9.*66*****8 PP == domain 4 score: 1.8 bits; conditional E-value: 7.7 EESS.SSEEEEEEETTSSEEEEEETTSEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtv 34 + G s v sl + +g+ ++sG+ Dg++ tr|C3ZCW1|C3ZCW1_BRAFL 129 IYGTdSYVVSLTANTSGKGILSGHADGSI 157 446645588999899999999***9**98 PP == domain 5 score: 3.5 bits; conditional E-value: 2.2 EESS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvri 36 + +H ++ ++la+ ++ ++a G+ D+ v + tr|C3ZCW1|C3ZCW1_BRAFL 174 ICTHgCPPYALAWAANSIMVA-GC-DKRVIV 202 4568666899*9999999985.**.988876 PP == domain 6 score: 1.7 bits; conditional E-value: 8.4 EEEEEEETTSSEEEEEE CS WD40 13 vtslafspdgawlasGs 29 +t+la+ +dg+ l++G+ tr|C3ZCW1|C3ZCW1_BRAFL 270 ITALAWKRDGSRLTAGT 286 9***********99885 PP >> tr|C3XTT1|C3XTT1_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_122526 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.0 0.0 3.2 3.4e+02 13 38 .] 78 107 .. 65 107 .. 0.71 2 ! 16.2 0.3 0.00021 0.022 1 38 [] 111 151 .. 111 151 .. 0.89 3 ! 18.5 0.1 4.2e-05 0.0044 2 38 .] 291 329 .. 290 329 .. 0.87 Alignments for each domain: == domain 1 score: 3.0 bits; conditional E-value: 3.2 EEEEEEETTSSEEEEEE.T....TSEEEEEE CS WD40 13 vtslafspdgawlasGs.d....DgtvriWd 38 tsl+++ d + ++ G+ D +v +Wd tr|C3XTT1|C3XTT1_BRAFL 78 FTSLDVNCDDTVVC-GGcQkrmpDTNVTLWD 107 68898888988875.65336789*******9 PP == domain 2 score: 16.2 bits; conditional E-value: 0.00021 TEEEEEEE.SS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 1 gqclrtlt.GH.ssvtslafspdgaw.lasGsdDgtvriWd 38 gq ++t+ H +++t ++f+p+ + lasGs Dg + i+d tr|C3XTT1|C3XTT1_BRAFL 111 GQIVHTYPdSHsDDITQVKFHPSIPHrLASGSTDGLISIFD 151 68899996599666*****999999999***********98 PP == domain 3 score: 18.5 bits; conditional E-value: 4.2e-05 EEEEEEE.SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtlt.GH.ssvtslafspdgawlasGsdDgtvriWd 38 ++l++l GH s +++l +++ l++G +Dg + +W+ tr|C3XTT1|C3XTT1_BRAFL 291 KPLYSLGdGHlSTIRCLHWQDKTESLVTGAEDGLLCLWK 329 57778745**999****88888888*************6 PP >> tr|C3Y391|C3Y391_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_249063 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 7.8 0.2 0.098 10 15 37 .. 468 492 .. 451 493 .. 0.77 2 ! 13.9 0.3 0.0012 0.12 2 37 .. 498 538 .. 497 538 .. 0.84 3 ? 2.0 0.0 6.6 6.9e+02 5 29 .. 564 589 .. 561 592 .. 0.83 4 ! 13.3 0.0 0.0019 0.19 13 37 .. 655 679 .. 625 680 .. 0.85 Alignments for each domain: == domain 1 score: 7.8 bits; conditional E-value: 0.098 EEE..EETTSSEEEEEETTSEEEEE CS WD40 15 sla..fspdgawlasGsdDgtvriW 37 +++ +s++ + l++G +D++ ri+ tr|C3Y391|C3Y391_BRAFL 468 CCCrlTSDNRHILICGFWDKSFRIY 492 33367777777789999*******8 PP == domain 2 score: 13.9 bits; conditional E-value: 0.0012 EEEEEEESSSS.EEEEE....EETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGHss.vtsla....fspdgawlasGsdDgtvriW 37 ++l++ GH + vt+la + +++sGs+D t+ +W tr|C3Y391|C3Y391_BRAFL 498 RLLQVVYGHWDvVTCLArsecYIGGDCYIVSGSRDATLLLW 538 6788889**3358***9999888888889************ PP == domain 3 score: 2.0 bits; conditional E-value: 6.6 EEEESS.SSEEEEEEETTSSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGs 29 ++ tGH + v s ++s + +++s+s tr|C3Y391|C3Y391_BRAFL 564 TIMTGHeTEVLSACVSAELGLVISCS 589 5679**888*9999999999999998 PP == domain 4 score: 13.3 bits; conditional E-value: 0.0019 EEEEEEETTSSEEEEEETTSEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriW 37 + s+ s dg++l++G+d++ v +W tr|C3Y391|C3Y391_BRAFL 655 ILSMVLSADGQYLVTGGDNRIVEVW 679 7778899****************** PP >> tr|C3ZZC2|C3ZZC2_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_131982 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 8.4 0.1 0.065 6.7 18 38 .] 258 278 .. 219 278 .. 0.85 2 ! 20.4 0.0 1e-05 0.0011 1 38 [] 558 597 .. 558 597 .. 0.84 3 ? 5.9 0.1 0.39 41 9 38 .] 609 637 .. 602 637 .. 0.77 Alignments for each domain: == domain 1 score: 8.4 bits; conditional E-value: 0.065 EETTSSEEEEE.ETTSEEEEEE CS WD40 18 fspdgawlasG.sdDgtvriWd 38 +s+ g+ +++G s g vr+Wd tr|C3ZZC2|C3ZZC2_BRAFL 258 VSSCGTHIVAGfS-EGIVRLWD 278 5777999****55.*******9 PP == domain 2 score: 20.4 bits; conditional E-value: 1e-05 TEEEEEEESS.SSEEEEE..EETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtsla..fspdgawlasGsdDgtvriWd 38 g++l++l+GH + vt+++ +sp + + ++G +D+ vr++d tr|C3ZZC2|C3ZZC2_BRAFL 558 GKQLTSLRGHrGQVTCMDlrNSPPNML-VTGAEDKRVRVFD 597 67899*****888****8866666666.68*********98 PP == domain 3 score: 5.9 bits; conditional E-value: 0.39 SS.SSEEEEEEETTSSE....EEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgaw....lasGsdDgtvriWd 38 +H +v+++ ++ ++sG++ g + +Wd tr|C3ZZC2|C3ZZC2_BRAFL 609 AHpLGVSCV------QMddwkVVSGGREGALCVWD 637 674448888......55555888***********9 PP >> tr|C3Z5D7|C3Z5D7_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_202950 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 26.0 0.0 1.7e-07 1.8e-05 7 38 .] 3077 3109 .. 3070 3109 .. 0.91 2 ? 8.1 0.0 0.078 8.2 13 38 .] 3170 3200 .. 3158 3200 .. 0.65 Alignments for each domain: == domain 1 score: 26.0 bits; conditional E-value: 1.7e-07 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 l GH +vt+la+s+ + ++sGs+D+t+ iWd tr|C3Z5D7|C3Z5D7_BRAFL 3077 LYGHtEPVTCLAVSSAYNVIVSGSRDRTCIIWD 3109 67**888*************************9 PP == domain 2 score: 8.1 bits; conditional E-value: 0.078 EEEEE......EETTSSEEEEEETTSEEEEEE CS WD40 13 vtsla......fspdgawlasGsdDgtvriWd 38 + +++ ++ + +++Gs Dg vr+W+ tr|C3Z5D7|C3Z5D7_BRAFL 3170 ILCVCmselmeWDVQNV-IMTGSSDGVVRMWS 3200 66776444444444444.569*88*******5 PP >> tr|C3Z3M6|C3Z3M6_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_73706 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 26.3 0.0 1.4e-07 1.5e-05 2 37 .. 104 140 .. 103 140 .. 0.94 2 ? 6.7 0.0 0.22 23 2 37 .. 146 191 .. 145 191 .. 0.73 Alignments for each domain: == domain 1 score: 26.3 bits; conditional E-value: 1.4e-07 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 q ++++ GH + v s+++s++ ++lasGs Dgtv +W tr|C3Z3M6|C3Z3M6_BRAFL 104 QRTQVFVGHvGAVFSVDYSDELQLLASGSADGTVNLW 140 678899***999************************* PP == domain 2 score: 6.7 bits; conditional E-value: 0.22 EEEEEEESS.SSEEEEE.........EETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtsla.........fspdgawlasGsdDgtvriW 37 +c +++GH +vt + ++ g +++ ++d + ++iW tr|C3Z3M6|C3Z3M6_BRAFL 146 ECYNVFRGHtEWVTRVIlskcqvdsvLHRAGEYVLISMDRNEIKIW 191 57889****8889999666666667777777777777777777777 PP >> tr|C3ZHQ1|C3ZHQ1_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_79624 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 5.5 0.2 0.52 54 10 37 .. 61 88 .. 53 89 .. 0.91 2 ? 7.1 0.1 0.16 17 10 37 .. 100 130 .. 94 131 .. 0.77 3 ! 24.0 0.0 7.8e-07 8.1e-05 8 29 .. 152 173 .. 144 181 .. 0.82 Alignments for each domain: == domain 1 score: 5.5 bits; conditional E-value: 0.52 SSSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 10 HssvtslafspdgawlasGsdDgtvriW 37 Hs +++++++p+ + +a + +D++++++ tr|C3ZHQ1|C3ZHQ1_BRAFL 61 HSAIRAFCWHPHIHKFAVALRDNSIKVY 88 7779*******9999999988*****98 PP == domain 2 score: 7.1 bits; conditional E-value: 0.16 S...SSEEEEEEETTSSEE.EEEETTSEEEEE CS WD40 10 H...ssvtslafspdgawl.asGsdDgtvriW 37 H ++v++la+ p a + a G+ + v iW tr|C3ZHQ1|C3ZHQ1_BRAFL 100 HkvqKGVSALAWEPQCASVlAVGC-QNCVLIW 130 4433679***99999999625788.******* PP == domain 3 score: 24.0 bits; conditional E-value: 7.8e-07 ESSSSEEEEEEETTSSEEEEEE CS WD40 8 tGHssvtslafspdgawlasGs 29 GHs++t+la+sp+g++las+s tr|C3ZHQ1|C3ZHQ1_BRAFL 152 PGHSPITCLAWSPHGKLLASAS 173 5**99**************997 PP >> tr|C3Y442|C3Y442_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_128130 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 21.5 0.2 4.7e-06 0.00049 5 37 .. 55 88 .. 48 89 .. 0.79 2 ? 7.8 0.0 0.099 10 4 37 .. 114 151 .. 111 152 .. 0.65 3 ? 6.1 1.9 0.35 36 3 38 .] 596 637 .. 594 637 .. 0.70 4 ? 8.4 0.3 0.064 6.7 7 36 .. 723 756 .. 718 756 .. 0.80 5 ? 4.4 0.2 1.2 1.2e+02 9 37 .. 782 810 .. 773 811 .. 0.68 Alignments for each domain: == domain 1 score: 21.5 bits; conditional E-value: 4.7e-06 EEEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 5 rtltGHss.vtslafspdgawlasGsdDgtvriW 37 + ++GH++ + s++++p l+++sdD++vr+W tr|C3Y442|C3Y442_BRAFL 55 QRISGHQGvIFSVCYHPPTGRLCTASDDRSVRLW 88 3347**7757****8888888899********** PP == domain 2 score: 7.8 bits; conditional E-value: 0.099 EEEEESS.SSEEEEEEETTSSE.E..EEEETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgaw.l..asGsdDgtvriW 37 + + GH s v++++ +d + a+G+ D + r+W tr|C3Y442|C3Y442_BRAFL 114 VFEVYGHgSRVWDVQLTQDYVIsVgeATGGGDTSTRLW 151 55667**777**9954444444313345756******* PP == domain 3 score: 6.1 bits; conditional E-value: 0.35 EEEEEESSSSEEEEE....EETTSSE...EEEEETTSEEEEEE CS WD40 3 clrtltGHssvtsla....fspdgaw...lasGsdDgtvriWd 38 c+ + H +v s++ + dg+ ++sG Dg + +W+ tr|C3Y442|C3Y442_BRAFL 596 CVSDFHHH-CVLSVDhfftTTADGSThtyVISGATDGQIAVWN 637 56666666.78888777774444444444899*88*******8 PP == domain 4 score: 8.4 bits; conditional E-value: 0.064 EESS.SSEEEEE...EETTSSEEEEEETTSEEEE CS WD40 7 ltGH.ssvtsla...fspdgawlasGsdDgtvri 36 l+ H s+v++++ +++++ ++asG+dD+++ i tr|C3Y442|C3Y442_BRAFL 723 LESHqSGVNAISiwrVDSHHYLVASGGDDNSLQI 756 568988899999876677777799*****99865 PP == domain 5 score: 4.4 bits; conditional E-value: 1.2 SS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriW 37 +H +t++ ++ + l ++s D+ v +W tr|C3Y442|C3Y442_BRAFL 782 AHaATITDVHIVDSCTIL-TASVDQRVNMW 810 454449999555555555.7899******* PP >> tr|C3ZM62|C3ZM62_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_121364 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 12.7 0.0 0.0029 0.3 10 38 .] 874 903 .. 866 903 .. 0.82 2 ! 18.0 0.1 6.1e-05 0.0064 6 38 .] 1099 1136 .. 1097 1136 .. 0.81 3 ? 5.5 1.1 0.51 54 8 33 .. 1152 1178 .. 1145 1182 .. 0.81 Alignments for each domain: == domain 1 score: 12.7 bits; conditional E-value: 0.0029 S.SSE.EEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 H.ssv.tslafspdgawlasGsdDgtvriWd 38 H + v +l fspd+++la +sd g++ +W+ tr|C3ZM62|C3ZM62_BRAFL 874 HpGAVrLCL-FSPDNTYLAVASDGGSLNVWK 903 655684466.*********9**********6 PP == domain 2 score: 18.0 bits; conditional E-value: 6.1e-05 EEESS.SSEEEEEEETTSSE..........EEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgaw..........lasGsdDgtvriWd 38 +l+GH v++++ + ++sG+ D+tvr+Wd tr|C3ZM62|C3ZM62_BRAFL 1099 KLKGHtEAVSCCS------FgsarpqesppICSGGNDNTVRVWD 1136 589**777****5......4444455999999***********9 PP == domain 3 score: 5.5 bits; conditional E-value: 0.51 ESS.SSEEEEEEETTSSEEEEEETTSE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgt 33 H +svts+ fs g+ ++s+s D t tr|C3ZM62|C3ZM62_BRAFL 1152 VCHqTSVTSCGFSTLGDSVISCSADTT 1178 479889*****************6654 PP >> tr|C3YJB3|C3YJB3_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_126916 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 2.0 0.0 6.8 7.1e+02 16 38 .] 331 352 .. 324 352 .. 0.85 2 ! 15.9 0.1 0.00028 0.029 13 37 .. 372 398 .. 362 399 .. 0.69 3 ! 12.0 0.1 0.0048 0.5 3 38 .] 461 498 .. 459 498 .. 0.73 4 ? 3.2 0.1 2.8 2.9e+02 5 38 .] 509 544 .. 505 544 .. 0.64 Alignments for each domain: == domain 1 score: 2.0 bits; conditional E-value: 6.8 EEEETTSSEEEEEETTSEEEEEE CS WD40 16 lafspdgawlasGsdDgtvriWd 38 ++f+p+ + +a ++ + + iW+ tr|C3YJB3|C3YJB3_BRAFL 331 VKFHPYDPHMAVAD-KDGISIWN 352 78*******99877.88888887 PP == domain 2 score: 15.9 bits; conditional E-value: 0.00028 EEEEEEETTSSE..EEEEETTSEEEEE CS WD40 13 vtslafspdgaw..lasGsdDgtvriW 37 +t+l+f ++ l+sGsdDg vriW tr|C3YJB3|C3YJB3_BRAFL 372 ITALDFINAHDItlLLSGSDDGAVRIW 398 6666433333334489*********** PP == domain 3 score: 12.0 bits; conditional E-value: 0.0048 EEEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 ++ + tG s+vtsl ++ g+ l++G+ Dg+vr++d tr|C3YJB3|C3YJB3_BRAFL 461 LQDIPTGAdSCVTSLVSDSVGRSlLIAGCGDGSVRLFD 498 566678886779999866666662568866******98 PP == domain 4 score: 3.2 bits; conditional E-value: 2.8 EEEESS.SSEEEEE..EETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtsla..fspdgawlasGsdDgtvriWd 38 tl+ H ++v + ++g+ +s+s g +++Wd tr|C3YJB3|C3YJB3_BRAFL 509 MTLREHtGWVVKVFlqKGSEGNI-ISASVGGDLKFWD 544 67778866654441114445555.57899*******9 PP >> tr|C3ZY25|C3ZY25_BRAFL Cation-transporting ATPase OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_131390 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.1 0.1 0.019 2 9 37 .. 20 48 .. 12 56 .. 0.79 2 ! 11.1 0.1 0.0088 0.92 9 37 .. 124 152 .. 113 160 .. 0.79 3 ? 3.7 0.1 2 2.1e+02 2 37 .. 221 256 .. 220 257 .. 0.67 4 ? 9.2 0.0 0.035 3.7 8 38 .] 277 312 .. 264 312 .. 0.78 5 ? 7.5 0.3 0.12 13 10 38 .] 326 356 .. 317 356 .. 0.81 Alignments for each domain: == domain 1 score: 10.1 bits; conditional E-value: 0.019 SSSSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 9 GHssvtslafspdgawlasGsdDgtvriW 37 GH +v ++++s dg+++a+G g v+i+ tr|C3ZY25|C3ZY25_BRAFL 20 GHENVLCVKYSYDGTLVAAGLVHGAVKIF 48 9*77**************99656666664 PP == domain 2 score: 11.1 bits; conditional E-value: 0.0088 SSSSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 9 GHssvtslafspdgawlasGsdDgtvriW 37 GH +v ++++s dg+++asG g v+i+ tr|C3ZY25|C3ZY25_BRAFL 124 GHENVLCVKYSYDGTLVASGLVHGAVKIF 152 9977***************9666666664 PP == domain 3 score: 3.7 bits; conditional E-value: 2 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +cl+t+ + +fsp+g+ +++G+ ++++ tr|C3ZY25|C3ZY25_BRAFL 221 SCLHTIHENrQTL-TASFSPHGDVFVTGGASAQLHMY 256 6777754443335.556***********976666665 PP == domain 4 score: 9.2 bits; conditional E-value: 0.035 ESS.SSEEEEEEETTSSE....EEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgaw....lasGsdDgtvriWd 38 +GH v s+ ++p+ ++sG++D t+ +Wd tr|C3ZY25|C3ZY25_BRAFL 277 DGHmLRVFSVLYHPNAVAypgvFLSGGWDDTIQFWD 312 5776667777766666667776679**********9 PP == domain 5 score: 7.5 bits; conditional E-value: 0.12 SSSE..EEEEEETTSSEEEEEET..TSEEEEEE CS WD40 10 Hssv..tslafspdgawlasGsd..DgtvriWd 38 H + +l+ +p+++ +++Gs+ D + +Wd tr|C3ZY25|C3ZY25_BRAFL 326 H--IcgEGLDIDPEHNHVLTGSWrkDSALQVWD 356 5..54458999***********767*******9 PP >> tr|C3ZGK1|C3ZGK1_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_240152 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 7.1 0.3 0.16 17 2 28 .. 41 72 .. 40 81 .. 0.81 2 ? 6.9 0.0 0.19 19 14 38 .] 114 139 .. 106 139 .. 0.85 3 ? 3.7 0.8 2 2e+02 24 37 .. 175 193 .. 141 194 .. 0.57 4 ? 8.3 0.0 0.072 7.5 7 37 .. 284 316 .. 278 317 .. 0.88 5 ? 4.1 0.0 1.5 1.6e+02 11 37 .. 379 406 .. 357 407 .. 0.67 Alignments for each domain: == domain 1 score: 7.1 bits; conditional E-value: 0.16 EEEEEEESSSS......EEEEEEETTSSEEEEE CS WD40 2 qclrtltGHss......vtslafspdgawlasG 28 +c++tl+ H + vt+l++++ g+ +a + tr|C3ZGK1|C3ZGK1_BRAFL 41 TCVHTLS-HADlepglnVTGLSWNSTGSTVAVS 72 599**96.8556779**************9865 PP == domain 2 score: 6.9 bits; conditional E-value: 0.19 EEEEEETTSSEEEEEE.TTSEEEEEE CS WD40 14 tslafspdgawlasGs.dDgtvriWd 38 ++af+p+ + +++G+ +g+v +Wd tr|C3ZGK1|C3ZGK1_BRAFL 114 MCVAFHPEVPAFIAGGtFNGKVQLWD 139 6999****9999999635*******9 PP == domain 3 score: 3.7 bits; conditional E-value: 2 E......EEEEETTSEEEEE CS WD40 24 w......lasGsdDgtvriW 37 ++ ++ Dg++ +W tr|C3ZGK1|C3ZGK1_BRAFL 175 GknkyklVSISG-DGKILVW 193 133444244567.9998888 PP == domain 4 score: 8.3 bits; conditional E-value: 0.072 EESS.SSEEEEEEETTSSEEE.EEETTSEEEEE CS WD40 7 ltGH.ssvtslafspdgawla.sGsdDgtvriW 37 +t H ++v+++ sp+++ l+ +++ D+t r++ tr|C3ZGK1|C3ZGK1_BRAFL 284 FTPHvGPVYAVECSPYHRNLFlTCGIDQTARVY 316 7789999************855*********98 PP == domain 5 score: 4.1 bits; conditional E-value: 1.5 SSEEEEE.EETTSSEEEEEETTSEEEEE CS WD40 11 ssvtsla.fspdgawlasGsdDgtvriW 37 ++v+ l + ++ ++la+G++ g vr+W tr|C3ZGK1|C3ZGK1_BRAFL 379 KPVYTLEfNLHNRQLLATGDELGDVRVW 406 335555555566677899*99******* PP >> tr|C3ZUA9|C3ZUA9_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_153672 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 2.5 0.3 4.8 5e+02 12 33 .. 111 131 .. 101 135 .. 0.75 2 ! 19.1 0.2 2.7e-05 0.0028 3 37 .. 166 201 .. 164 201 .. 0.84 3 ? 10.9 0.1 0.01 1.1 6 37 .. 232 273 .. 227 274 .. 0.85 4 ? 7.1 0.0 0.17 18 9 37 .. 995 1024 .. 990 1025 .. 0.62 Alignments for each domain: == domain 1 score: 2.5 bits; conditional E-value: 4.8 S.EEEEEEETTSSEEEEEETTSE CS WD40 12 s.vtslafspdgawlasGsdDgt 33 s vt l++++dg+ l+ Gs ++ tr|C3ZUA9|C3ZUA9_BRAFL 111 SlVTNLSWNHDGTRLLVGS--NS 131 369************9875..55 PP == domain 2 score: 19.1 bits; conditional E-value: 2.7e-05 EEEEEESSSSEEEEEEETTSSEEEEEE.TTSEEEEE CS WD40 3 clrtltGHssvtslafspdgawlasGs.dDgtvriW 37 c++ +++ + v++l+fspdg+++as++ +D+ v+iW tr|C3ZUA9|C3ZUA9_BRAFL 166 CIWQCRTATAVCHLQFSPDGQLFASAGkEDRLVKIW 201 6777776667**************98846******* PP == domain 3 score: 10.9 bits; conditional E-value: 0.01 EEESS.SSEEEEEEETTSSE.........EEEEETTSEEEEE CS WD40 6 tltGH.ssvtslafspdgaw.........lasGsdDgtvriW 37 ++ +H vt++++ + +++ l+++++D+ +riW tr|C3ZUA9|C3ZUA9_BRAFL 232 IYIAHpRAVTGFSWRRTSKYmpkgsiancLVTSCRDNICRIW 273 67899656****98888888999999999888889******* PP == domain 4 score: 7.1 bits; conditional E-value: 0.17 SS.SS..E..EEEEEETTSSEEE..EEETTSEEEEE CS WD40 9 GH.ss..v..tslafspdgawla..sGsdDgtvriW 37 GH ss + +l ++l+ ++s Dg+vr+W tr|C3ZUA9|C3ZUA9_BRAFL 995 GHlSSasIypACL-----APYLIvtACS-DGKVRFW 1024 5654445533366.....4554322678.******* PP >> tr|C3YJC9|C3YJC9_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_93160 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 4.1 0.2 1.4 1.5e+02 8 38 .] 204 230 .. 193 230 .. 0.77 2 ? 10.0 0.3 0.02 2.1 8 38 .] 245 274 .. 237 274 .. 0.77 3 ? 9.1 0.0 0.04 4.2 9 38 .] 289 317 .. 279 317 .. 0.75 4 ? 6.9 0.0 0.19 20 7 36 .. 337 368 .. 324 368 .. 0.73 Alignments for each domain: == domain 1 score: 4.1 bits; conditional E-value: 1.4 ESSSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGHssvtslafspdgawlasGsdDgtvriWd 38 +GH + sla s++++ l++ g + +Wd tr|C3YJC9|C3YJC9_BRAFL 204 KGH--IVSLACSSHQPCLLA-A-GGDILLWD 230 699..99**99999999884.5.67777776 PP == domain 2 score: 10.0 bits; conditional E-value: 0.02 ESSSS....EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGHss....vtslafspdgawlasGsdDgtvriWd 38 tGHs +t++ ++ +++ s+D+ + +Wd tr|C3YJC9|C3YJC9_BRAFL 245 TGHSRvvfsITAV-----QNHIITTSMDRQIILWD 274 6994466669999.....566677788*******9 PP == domain 3 score: 9.1 bits; conditional E-value: 0.04 SSSSEEEEEEETTSSE.EEEE.ETTSEEEEEE CS WD40 9 GHssvtslafspdgaw.lasG.sdDgtvriWd 38 G v++lafsp + la G + Dg vriW+ tr|C3YJC9|C3YJC9_BRAFL 289 GF--VYALAFSPLTTGqLAIGvG-DGMVRIWN 317 43..8888777777667888977.*******8 PP == domain 4 score: 6.9 bits; conditional E-value: 0.19 EESS.SS.EEEEEEETTSSEEEEEETTSEEEE CS WD40 7 ltGH.ss.vtslafspdgawlasGsdDgtvri 36 t+H + t +a+ dg+++a G +Dg+v + tr|C3YJC9|C3YJC9_BRAFL 337 VTAHkLPpATEIAWREDGQFVAIGNEDGSVEV 368 3455422247788***********99***975 PP >> tr|C3XS33|C3XS33_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_71898 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.4 0.2 0.032 3.3 13 38 .] 277 302 .. 253 302 .. 0.86 2 ! 18.3 0.1 4.9e-05 0.0051 13 38 .] 319 344 .. 307 344 .. 0.89 3 ? 3.6 0.1 2.1 2.1e+02 8 30 .. 355 385 .. 348 389 .. 0.66 Alignments for each domain: == domain 1 score: 9.4 bits; conditional E-value: 0.032 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 + ++fspd++ +a+ s Dg +r+ d tr|C3XS33|C3XS33_BRAFL 277 LNEFSFSPDNKHIACVSQDGFLRVID 302 56678********988*******965 PP == domain 2 score: 18.3 bits; conditional E-value: 4.9e-05 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 ++++spdg+++a G++D v +W+ tr|C3XS33|C3XS33_BRAFL 319 LLCICWSPDGKLVAVGGEDDLVTVWS 344 56***********************5 PP == domain 3 score: 3.6 bits; conditional E-value: 2.1 ESS.SSEEEEEEETTSSEEE.......EEET CS WD40 8 tGH.ssvtslafspdgawla.......sGsd 30 GH s+v+ +af+p ++++ sGsd tr|C3XS33|C3XS33_BRAFL 355 HGHkSWVSVVAFDPFTTMVVegeagdfSGSD 385 478666*9999***99996433312225664 PP >> tr|C3Y6B2|C3Y6B2_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_126632 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 6.5 0.0 0.25 26 17 36 .. 59 78 .. 47 80 .. 0.91 2 ! 27.8 0.4 4.7e-08 4.9e-06 1 38 [] 84 123 .. 84 123 .. 0.88 Alignments for each domain: == domain 1 score: 6.5 bits; conditional E-value: 0.25 EEETTSSEEEEEETTSEEEE CS WD40 17 afspdgawlasGsdDgtvri 36 afs+dg+++as++ D+++++ tr|C3Y6B2|C3Y6B2_BRAFL 59 AFSHDGTLMASSHGDHNIHV 78 79**********88****97 PP == domain 2 score: 27.8 bits; conditional E-value: 4.7e-08 TEEEEEEESSSS.EEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 1 gqclrtltGHss.vtslafspdgawl.asGsdDgtvriWd 38 g+c+rtl GHs +++ f+p+++ + asG+ Dg vr+Wd tr|C3Y6B2|C3Y6B2_BRAFL 84 GKCIRTLVGHSRtPWCVTFHPSSNEIlASGCLDGEVRVWD 123 79********54579**********6268999*******9 PP >> tr|C3ZZG8|C3ZZG8_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_107298 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 8.0 0.0 0.084 8.8 18 38 .] 147 167 .. 109 167 .. 0.82 2 ? 5.4 0.2 0.58 60 10 38 .] 228 260 .. 219 260 .. 0.75 3 ! 15.1 0.1 0.0005 0.052 9 38 .] 272 303 .. 263 303 .. 0.69 Alignments for each domain: == domain 1 score: 8.0 bits; conditional E-value: 0.084 EETTSSEEEEEETTSEEEEEE CS WD40 18 fspdgawlasGsdDgtvriWd 38 +s+dg+ +++++ D+ +r++d tr|C3ZZG8|C3ZZG8_BRAFL 147 YSRDGNVFLTACQDQRIRVYD 167 89*****************98 PP == domain 2 score: 5.4 bits; conditional E-value: 0.58 S.SS...EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 H.ss...vtslafspdgawlasGsdDgtvriWd 38 H ++ v sl fs+d + ++ + Dg ++++d tr|C3ZZG8|C3ZZG8_BRAFL 228 HdGFascVFSLTFSHDDSEIMGAANDGCLYVFD 260 53224459************94467****9998 PP == domain 3 score: 15.1 bits; conditional E-value: 0.0005 SS.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtsla.fspdgawlasGsdDgtvriWd 38 H ++ +++ + +++ l+sG+dDg +++Wd tr|C3ZZG8|C3ZZG8_BRAFL 272 SHsNDANAVTfADASSQILFSGGDDGLLKVWD 303 46656455542256666688***********9 PP >> tr|C3YL72|C3YL72_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_62485 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 12.0 0.0 0.0047 0.49 9 38 .] 119 150 .. 113 150 .. 0.79 2 ? 3.2 0.0 2.8 2.9e+02 3 38 .] 202 244 .. 200 244 .. 0.64 3 ! 11.5 0.0 0.0069 0.72 2 38 .] 250 288 .. 249 288 .. 0.82 4 ? 4.1 0.1 1.5 1.6e+02 15 37 .. 311 334 .. 298 335 .. 0.69 Alignments for each domain: == domain 1 score: 12.0 bits; conditional E-value: 0.0047 SS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawl.asGsdDgtvriWd 38 H ++v++l+++p ++ l asG D + iWd tr|C3YL72|C3YL72_BRAFL 119 KHsGPVRALDVNPFQKNLlASGANDSEIFIWD 150 59667*****77777775268889*******9 PP == domain 2 score: 3.2 bits; conditional E-value: 2.8 EEEEEESS.SSEEEEE..EETTSSE..EEEEET..TSEEEEEE CS WD40 3 clrtltGH.ssvtsla..fspdgaw..lasGsd..DgtvriWd 38 ++ + + H s ++++a ++p+ a ++++ d + + +Wd tr|C3YL72|C3YL72_BRAFL 202 PIIKVSDHsSRIRCQAiaWHPEVATqlVLASEDdrSPVIQLWD 244 5667789*555*9998888888777865566431255555565 PP == domain 3 score: 11.5 bits; conditional E-value: 0.0069 EEEEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtsla.fspdgawlasGsdDgtvriWd 38 ++l++l+ H ++ s+a ++d ++l+s+ +D+ + W+ tr|C3YL72|C3YL72_BRAFL 250 SPLKVLENHtRGILSVAwCPQDPDLLLSCAKDNRILCWN 288 58999****666****95555556678***********8 PP == domain 4 score: 4.1 bits; conditional E-value: 1.5 EEEEETTSSEEE.EEETTSEEEEE CS WD40 15 slafspdgawla.sGsdDgtvriW 37 +++++p ++ ++ s+s Dg++ i+ tr|C3YL72|C3YL72_BRAFL 311 DVRWCPRNPAVIsSASFDGHISIY 334 34455555556515689*****98 PP >> tr|C3ZLI2|C3ZLI2_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_83751 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 2.9 0.0 3.4 3.6e+02 13 37 .. 50 74 .. 36 74 .. 0.79 2 ! 11.6 0.3 0.0062 0.64 13 38 .] 171 196 .. 148 196 .. 0.81 3 ? 10.8 0.1 0.011 1.2 13 38 .] 330 396 .. 322 396 .. 0.65 Alignments for each domain: == domain 1 score: 2.9 bits; conditional E-value: 3.4 EEEEEEETTSSEEEEEETTSEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriW 37 t++a++p ++ la G++ g++r++ tr|C3ZLI2|C3ZLI2_BRAFL 50 PTAMAYDPVQHILAIGCKSGSIRLY 74 478888899999***********97 PP == domain 2 score: 11.6 bits; conditional E-value: 0.0062 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 +sla++++g+ +++++ Dg++ +W+ tr|C3ZLI2|C3ZLI2_BRAFL 171 LHSLAWHHEGKQFMCSHSDGSLTVWN 196 67899*********9988*******8 PP == domain 3 score: 10.8 bits; conditional E-value: 0.011 EEEEE........................EETTSSE.................EEEEETTSEEEEEE CS WD40 13 vtsla........................fspdgaw.................lasGsdDgtvriWd 38 vt++ +d++w +++G+ Dg++++Wd tr|C3ZLI2|C3ZLI2_BRAFL 330 VTCCTyyadcppemipafytvgsrqqkktGFSDKNWpvkggewgtstcsypeiIITGHADGSLKFWD 396 5555555555555555555555555555555566666666666777777777689***********9 PP >> tr|C3Z7S5|C3Z7S5_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_119030 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.0 0.0 0.04 4.2 13 38 .] 174 199 .. 163 199 .. 0.89 2 ! 13.5 0.1 0.0016 0.16 21 38 .] 373 390 .. 361 390 .. 0.89 3 ? 2.3 0.0 5.5 5.7e+02 12 31 .. 530 548 .. 519 555 .. 0.77 Alignments for each domain: == domain 1 score: 9.0 bits; conditional E-value: 0.04 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 sla++++g+ ++s++ Dg+ iW+ tr|C3Z7S5|C3Z7S5_BRAFL 174 LESLAWHRSGDQFMSAHADGSYCIWN 199 579**********************8 PP == domain 2 score: 13.5 bits; conditional E-value: 0.0016 TSSEEEEEETTSEEEEEE CS WD40 21 dgawlasGsdDgtvriWd 38 ++++l++G++Dg+vr+Wd tr|C3Z7S5|C3Z7S5_BRAFL 373 SKDLLLTGHEDGSVRFWD 390 67889************9 PP == domain 3 score: 2.3 bits; conditional E-value: 5.5 SEEEEEEETTSSEEEEEETT CS WD40 12 svtslafspdgawlasGsdD 31 svt+la+++++++la G+ tr|C3Z7S5|C3Z7S5_BRAFL 530 SVTALANHSENQLLAIGT-S 548 5*************9985.3 PP >> tr|C3YGP3|C3YGP3_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_122327 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.5 0.0 2.3 2.4e+02 19 38 .] 17 36 .. 10 36 .. 0.78 2 ! 18.0 0.4 5.8e-05 0.0061 5 37 .. 111 145 .. 107 146 .. 0.81 3 ? 2.6 0.0 4.4 4.6e+02 13 38 .] 163 186 .. 152 186 .. 0.79 4 ? 4.6 0.1 1 1e+02 3 17 .. 192 207 .. 190 248 .. 0.83 Alignments for each domain: == domain 1 score: 3.5 bits; conditional E-value: 2.3 ETTSSEEEEEETTSEEEEEE CS WD40 19 spdgawlasGsdDgtvriWd 38 +p + la +s Dg + +Wd tr|C3YGP3|C3YGP3_BRAFL 17 PPAADCLARASADGRLQLWD 36 566677887788*******9 PP == domain 2 score: 18.0 bits; conditional E-value: 5.8e-05 EEEE.SSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 5 rtlt.GHss.vtslafspdgawlasGsdDgtvriW 37 lt GH++ v++l++ + + l+s+sdD+++ W tr|C3YGP3|C3YGP3_BRAFL 111 SQLTgGHDDiVNCLCWRAEENSLFSCSDDQHIVEW 145 555559*6657********************9766 PP == domain 3 score: 2.6 bits; conditional E-value: 4.4 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 v ++ p g+ l+s +t+++Wd tr|C3YGP3|C3YGP3_BRAFL 163 VQTISLGPGGKTLLS-A-ARTIKLWD 186 667777888888885.6.89*****9 PP == domain 4 score: 4.6 bits; conditional E-value: 1 EEEEEESSSS.EEEEE CS WD40 3 clrtltGHss.vtsla 17 l ++tGH s vtsl tr|C3YGP3|C3YGP3_BRAFL 192 VLLSFTGHASlVTSLL 207 6789****5569**93 PP >> tr|C3XZK4|C3XZK4_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_65679 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 4.4 0.0 1.1 1.2e+02 24 38 .] 91 105 .. 74 105 .. 0.81 2 ? 4.7 0.0 0.97 1e+02 13 38 .] 132 156 .. 124 156 .. 0.85 3 ! 12.9 0.0 0.0025 0.26 2 38 .] 205 242 .. 204 242 .. 0.90 Alignments for each domain: == domain 1 score: 4.4 bits; conditional E-value: 1.1 EEEEEETTSEEEEEE CS WD40 24 wlasGsdDgtvriWd 38 +a+G++ + +++Wd tr|C3XZK4|C3XZK4_BRAFL 91 QVATGGKENELKLWD 105 489***********9 PP == domain 2 score: 4.7 bits; conditional E-value: 0.97 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 vt+l+f ++++++++ + + vr++d tr|C3XZK4|C3XZK4_BRAFL 132 VTDLQFLSEQKLVTCTG-HRQVRVYD 156 89**9999999986557.99999998 PP == domain 3 score: 12.9 bits; conditional E-value: 0.0025 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + ++ ++G +++++l+ +p+ +++as++ D+ +ri d tr|C3XZK4|C3XZK4_BRAFL 205 KVQKAFKGFaGGIRGLQCHPSLPLVASCGLDRFLRIHD 242 678889999888***********************966 PP >> tr|C3ZJF1|C3ZJF1_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_279454 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 1.6 0.0 9.2 9.6e+02 13 38 .] 16 43 .. 9 43 .. 0.64 2 ? 7.1 0.0 0.17 17 4 35 .. 53 86 .. 50 87 .. 0.67 3 ? 9.5 0.0 0.028 2.9 5 38 .] 100 135 .. 96 135 .. 0.83 4 ? 5.5 0.0 0.55 57 4 38 .] 148 184 .. 145 184 .. 0.71 5 ? 2.8 0.1 3.9 4.1e+02 3 29 .. 244 273 .. 242 283 .. 0.67 Alignments for each domain: == domain 1 score: 1.6 bits; conditional E-value: 9.2 EEEEEEETTSSE.EE.EEETTSEEEEEE CS WD40 13 vtslafspdgaw.la.sGsdDgtvriWd 38 + s+a++p+ + l+ +G++ g + +Wd tr|C3ZJF1|C3ZJF1_BRAFL 16 IFSVAVHPSTTKmLVcAGDKWGRLGLWD 43 7789988888884331444556555565 PP == domain 2 score: 7.1 bits; conditional E-value: 0.17 EEEEESS.SSEEEEEEETTSSE.EEEEETTSEEE CS WD40 4 lrtltGH.ssvtslafspdgaw.lasGsdDgtvr 35 ++++ H ++++l+fsp ++ l +s+Dgt r tr|C3ZJF1|C3ZJF1_BRAFL 53 VYSYNPHsRPINCLQFSPVHHGkLYMCSYDGTMR 86 6788899555****97766555433356688876 PP == domain 3 score: 9.5 bits; conditional E-value: 0.028 EEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 + + +H + ++++p ++ +++++ D +v+i+d tr|C3ZJF1|C3ZJF1_BRAFL 100 HLYPAHdRTIKTVSVHPTQRHyFVTCCNDSNVYIYD 135 5588994449999999999998778888******98 PP == domain 4 score: 5.5 bits; conditional E-value: 0.55 EEEEESS.SSEEEEEEETTSSE..EEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgaw..lasGsdDgtvriWd 38 + +l H sv+s fsp + l+++ D +r++d tr|C3ZJF1|C3ZJF1_BRAFL 148 VASLYQHsRSVSSAYFSPASGSriLTTCF-DDRIRLFD 184 66777885448877777776666567778.*****998 PP == domain 5 score: 2.8 bits; conditional E-value: 3.9 EEEEEESSSSEEEEE....EETTSSEEEEEE CS WD40 3 clrtltGHssvtsla....fspdgawlasGs 29 +l+t+t + ts++ f+p + +la G+ tr|C3ZJF1|C3ZJF1_BRAFL 244 LLHTYTDPDYLTSICsiiaFHPTQFLLA-GG 273 6788886644666666668898888876.65 PP >> tr|C3Z9Z4|C3Z9Z4_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_264459 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 2.0 0.2 6.7 7e+02 13 37 .. 124 149 .. 110 149 .. 0.74 2 ? 10.3 0.0 0.016 1.6 6 38 .] 170 206 .. 161 206 .. 0.79 3 ! 17.1 1.5 0.00011 0.012 3 38 .] 259 296 .. 257 296 .. 0.86 Alignments for each domain: == domain 1 score: 2.0 bits; conditional E-value: 6.7 EEEEEEETTSSEEE.EEETTSEEEEE CS WD40 13 vtslafspdgawla.sGsdDgtvriW 37 ts++++ + l+ ++s D t+ iW tr|C3Z9Z4|C3Z9Z4_BRAFL 124 LTSFDWNEVDPNLIgTSSIDTTCTIW 149 6778655555558756688******9 PP == domain 2 score: 10.3 bits; conditional E-value: 0.016 EEESS.SSEEEEEEETTSSE...EEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgaw...lasGsdDgtvriWd 38 l +H + v+++afs+ g +as + Dg+vr++d tr|C3Z9Z4|C3Z9Z4_BRAFL 170 QLIAHdKEVYDIAFSRAGGGrdmFASVGADGSVRMFD 206 36799888****88877777997666566*****998 PP == domain 3 score: 17.1 bits; conditional E-value: 0.00011 EEEEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 ++ l+ H +v+++a+ p+++ ++ +++dD+ iWd tr|C3Z9Z4|C3Z9Z4_BRAFL 259 PVARLSNHrACVNGIAWAPHSSCHIcTAGDDHQALIWD 296 6677899*988************7636789*******9 PP >> tr|C3YHX7|C3YHX7_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_71608 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 13.4 0.0 0.0017 0.17 14 38 .] 75 100 .. 64 100 .. 0.89 2 ? 9.8 0.0 0.024 2.5 13 38 .] 284 310 .. 273 310 .. 0.66 Alignments for each domain: == domain 1 score: 13.4 bits; conditional E-value: 0.0017 EEEEEETTSSEEE.EEETTSEEEEEE CS WD40 14 tslafspdgawla.sGsdDgtvriWd 38 t+++fsp + la +G+d g+v +Wd tr|C3YHX7|C3YHX7_BRAFL 75 TCCCFSPTRPTLAfAGTDHGSVVVWD 100 9***********889**********9 PP == domain 2 score: 9.8 bits; conditional E-value: 0.024 EEEEE..EETTSSEEEEEETTSEEEEEE CS WD40 13 vtsla..fspdgawlasGsdDgtvriWd 38 vt+++ +l++++ Dg+vr+++ tr|C3YHX7|C3YHX7_BRAFL 284 VTAMDfcPFGFDYFLVACG-DGSVRLYN 310 5555433222233478899.******97 PP >> tr|C3ZI44|C3ZI44_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_83549 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 18.8 0.0 3.3e-05 0.0034 3 38 .] 1000 1036 .. 998 1036 .. 0.91 2 ? 5.1 0.0 0.73 76 22 38 .] 1284 1301 .. 1228 1301 .. 0.79 Alignments for each domain: == domain 1 score: 18.8 bits; conditional E-value: 3.3e-05 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++++ GH v ++a +d+++ ++Gs D+++++Wd tr|C3ZI44|C3ZI44_BRAFL 1000 LVHSMVGHtLQVMAVAMTQDSKYAVTGSLDNSLKVWD 1036 689999**555*************************9 PP == domain 2 score: 5.1 bits; conditional E-value: 0.73 SSEEE.EEETTSEEEEEE CS WD40 22 gawla.sGsdDgtvriWd 38 g++l+ sG +D ++ iWd tr|C3ZI44|C3ZI44_BRAFL 1284 GTMLVsSGYEDFNISIWD 1301 4445526779*******9 PP >> tr|C3ZBN4|C3ZBN4_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_201382 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.8 0.0 1.8 1.9e+02 3 34 .. 150 187 .. 148 189 .. 0.70 2 ? 1.8 0.0 7.6 7.9e+02 12 38 .] 209 235 .. 198 235 .. 0.65 3 ! 13.1 0.4 0.0022 0.23 1 38 [] 239 280 .. 239 280 .. 0.88 4 ? 1.5 0.0 9.4 9.8e+02 1 28 [. 284 311 .. 284 317 .. 0.77 Alignments for each domain: == domain 1 score: 3.8 bits; conditional E-value: 1.8 EEEEEE..SS.SS..EEEEEEETTSSEEEEEET...TSEE CS WD40 3 clrtlt..GH.ss..vtslafspdgawlasGsd...Dgtv 34 +++ l+ GH ++ +++ +g+++as+++ D+ v tr|C3ZBN4|C3ZBN4_BRAFL 150 LVHDLRimGHeFNarLSAI--TNNGKYVASCCKeliDPDV 187 5666666688733477877..99*******9965667666 PP == domain 2 score: 1.8 bits; conditional E-value: 7.6 SEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 12 svtslafspdgaw.lasGsdDgtvriWd 38 +v sla s ++ ++ G+++g v +Wd tr|C3ZBN4|C3ZBN4_BRAFL 209 PVVSLALSEESMSaVL-GCENGLVQVWD 235 5666644444444334.999*******9 PP == domain 3 score: 13.1 bits; conditional E-value: 0.0022 TEEEEEEESS.SSEEEEEEETTSSEEEE...EETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlas...GsdDgtvriWd 38 g c ++l+GH +v+ l+ ++g+ ++ ++ D ++r+Wd tr|C3ZBN4|C3ZBN4_BRAFL 239 GACRHVLDGHtHPVNTLQLADEGRRCLTfdpSHHDLSIRVWD 280 5799******555****99999999998888888*******9 PP == domain 4 score: 1.5 bits; conditional E-value: 9.4 TEEEEEEESSSSEEEEEEETTSSEEEEE CS WD40 1 gqclrtltGHssvtslafspdgawlasG 28 gqcl +lt +++++++ dg ++ G tr|C3ZBN4|C3ZBN4_BRAFL 284 GQCLAVLTPDQPISCCQILADGERVVIG 311 699999985578*999888888777665 PP >> tr|C3Y0L9|C3Y0L9_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_126843 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.1 0.2 3 3.1e+02 10 29 .. 437 471 .. 430 475 .. 0.81 2 ! 17.4 0.2 9.4e-05 0.0098 7 38 .] 3576 3608 .. 3572 3608 .. 0.91 3 ? 8.4 0.1 0.063 6.5 13 38 .] 3669 3699 .. 3658 3699 .. 0.67 Alignments for each domain: == domain 1 score: 3.1 bits; conditional E-value: 3 S.SSEEEEE...............EETTSSEEEEEE CS WD40 10 H.ssvtsla...............fspdgawlasGs 29 H ++++l+ fspd++++ sGs tr|C3Y0L9|C3Y0L9_BRAFL 437 HhHDICGLSsssyeqlahtlndsqFSPDSQYM-SGS 471 324799999999999999999999*******7.798 PP == domain 2 score: 17.4 bits; conditional E-value: 9.4e-05 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 l GH ++v++l++++ + ++sGs Dgt iWd tr|C3Y0L9|C3Y0L9_BRAFL 3576 LYGHtGPVSCLQVCRPYSIVVSGSQDGTAIIWD 3608 56**888*****9999999*************9 PP == domain 3 score: 8.4 bits; conditional E-value: 0.063 EEEEE..EETTSSE...EEEEETTSEEEEEE CS WD40 13 vtsla..fspdgaw...lasGsdDgtvriWd 38 ++++a + p+g +a+G Dg+vr+W+ tr|C3Y0L9|C3Y0L9_BRAFL 3669 IHCVAfsNAPEGISvnvVAAGLQDGSVRLWS 3699 67776444444444664678889*******5 PP >> tr|C3YXC1|C3YXC1_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_281490 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.7 0.0 2 2.1e+02 14 37 .. 14 47 .. 6 48 .. 0.68 2 ? 3.2 0.1 2.8 2.9e+02 10 34 .. 80 104 .. 74 156 .. 0.89 3 ! 14.5 0.0 0.00075 0.078 13 38 .] 220 246 .. 206 246 .. 0.83 4 ? 4.9 1.7 0.8 83 20 38 .] 271 290 .. 251 290 .. 0.62 Alignments for each domain: == domain 1 score: 3.7 bits; conditional E-value: 2 EEEEEETTSSE.......EEEEET...TSEEEEE CS WD40 14 tslafspdgaw.......lasGsd...DgtvriW 37 + +++ p g+ ++sGs+ + vr+W tr|C3YXC1|C3YXC1_BRAFL 14 NKIRWRPQGPQalqqsdvFVSGSWdneENRVRLW 47 555555555556566665789**76668888888 PP == domain 2 score: 3.2 bits; conditional E-value: 2.8 S.SSEEEEEEETTSSEEEEEETTSEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtv 34 H ++v +l+f ++ + la++s g+v tr|C3YXC1|C3YXC1_BRAFL 80 HqGDVKDLKFLDYDKILAASS-TGNV 104 767799999999999999887.6555 PP == domain 3 score: 14.5 bits; conditional E-value: 0.00075 EEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 13 vtslafspdgawla.sGsdDgtvriWd 38 ++l+ +p ++ ++ +G+ Dg++++Wd tr|C3YXC1|C3YXC1_BRAFL 220 LHCLDKHPGQPHIVaTGGQDGSLYMWD 246 58999999999974499*********9 PP == domain 4 score: 4.9 bits; conditional E-value: 0.8 TTSSE.EEEEETTSEEEEEE CS WD40 20 pdgaw.lasGsdDgtvriWd 38 p ++ l+s+s Dg++ Wd tr|C3YXC1|C3YXC1_BRAFL 271 PTHPDhLFSCSQDGSLWHWD 290 333332569**********8 PP >> tr|C3ZQF8|C3ZQF8_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_212988 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 19.0 0.0 2.8e-05 0.0029 8 38 .] 307 337 .. 302 337 .. 0.91 2 ? 4.9 0.1 0.79 83 6 38 .] 346 381 .. 342 381 .. 0.80 Alignments for each domain: == domain 1 score: 19.0 bits; conditional E-value: 2.8e-05 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 + H ssv++l+ +d ++l+s+++ g++++Wd tr|C3ZQF8|C3ZQF8_BRAFL 307 R-HkSSVCCLRLLRDENYLLSSDMQGKIKLWD 337 4.9788***************999*******9 PP == domain 2 score: 4.9 bits; conditional E-value: 0.79 EEESSSSEEEEE.....EETTSSEEEEEETTSEEEEEE CS WD40 6 tltGHssvtsla.....fspdgawlasGsdDgtvriWd 38 + GH v+ a +++ +++++ + D++ r+W+ tr|C3ZQF8|C3ZQF8_BRAFL 346 DYPGH--VNQYAhipliVDSQEKFIFAVGQDCHTRMWS 381 57899..77777777777888999998899*******5 PP >> tr|C3Z479|C3Z479_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_122031 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.4 0.0 0.0002 0.02 14 38 .] 455 480 .. 444 480 .. 0.74 2 ? 6.0 0.2 0.36 37 12 35 .. 710 732 .. 698 736 .. 0.75 Alignments for each domain: == domain 1 score: 16.4 bits; conditional E-value: 0.0002 EEEEEETTSSE.EEEEETTSEEEEEE CS WD40 14 tslafspdgaw.lasGsdDgtvriWd 38 +s+ ++pd++ + +Gs+D+t+r+Wd tr|C3Z479|C3Z479_BRAFL 455 CSMVVHPDQPTwMYTGSYDKTIRLWD 480 55555666665599***********9 PP == domain 2 score: 6.0 bits; conditional E-value: 0.36 SEEEEEEETTSSEEEEE.ETTSEEE CS WD40 12 svtslafspdgawlasG.sdDgtvr 35 sv+++a s++g++++ G + D+++ tr|C3Z479|C3Z479_BRAFL 710 SVNDVAISSSGDYIV-GvT-DCNLV 732 49***********98.845.66654 PP >> tr|C3YZZ0|C3YZZ0_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_108610 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 13.1 0.1 0.0021 0.22 14 38 .] 9 34 .. 4 34 .. 0.94 2 ? 10.0 0.0 0.021 2.1 13 38 .] 245 271 .. 234 271 .. 0.66 Alignments for each domain: == domain 1 score: 13.1 bits; conditional E-value: 0.0021 EEEEEETTSSEEE.EEETTSEEEEEE CS WD40 14 tslafspdgawla.sGsdDgtvriWd 38 t+++fsp + la +G+d g+v +Wd tr|C3YZZ0|C3YZZ0_BRAFL 9 TCCCFSPTRPTLAfAGTDHGSVVVWD 34 8***********889**********9 PP == domain 2 score: 10.0 bits; conditional E-value: 0.021 EEEEE..EETTSSEEEEEETTSEEEEEE CS WD40 13 vtsla..fspdgawlasGsdDgtvriWd 38 vt+++ +l++++ Dg+vr+++ tr|C3YZZ0|C3YZZ0_BRAFL 245 VTAMDfcPFGFDYFLVACG-DGSVRLYN 271 5555433222233478899.******97 PP >> tr|C3Y3W9|C3Y3W9_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_62124 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 11.3 1.3 0.0081 0.84 5 38 .] 148 183 .. 143 183 .. 0.86 2 ! 12.8 0.0 0.0027 0.28 9 37 .. 235 264 .. 227 265 .. 0.88 3 ? 3.3 0.1 2.7 2.8e+02 10 31 .. 278 306 .. 269 308 .. 0.75 Alignments for each domain: == domain 1 score: 11.3 bits; conditional E-value: 0.0081 EEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtsla.fspdgawlasGsdDgtvriWd 38 t +GH s +t++ + + g+ +++++d g++ +W+ tr|C3Y3W9|C3Y3W9_BRAFL 148 ETMKGHsSAITDITsTGHTGDTVVTADDSGNIIVWK 183 5689**666****999999999*************6 PP == domain 2 score: 12.8 bits; conditional E-value: 0.0027 SS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriW 37 +H +++sl+ p++ +l+s+s+D riW tr|C3Y3W9|C3Y3W9_BRAFL 235 AHaRWISSLDMLPESGLLISASEDSYARIW 264 78666************************* PP == domain 3 score: 3.3 bits; conditional E-value: 2.7 S.SSEEEEE......EETTSSEEE.EEETT CS WD40 10 H.ssvtsla......fspdgawla.sGsdD 31 H +vt+++ +spdg+ +a +G D tr|C3Y3W9|C3Y3W9_BRAFL 278 HsECVTDIQlcggkfTSPDGKAFAvTGY-D 306 6444999999999999999999863555.6 PP >> tr|C3Y1C2|C3Y1C2_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_83650 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.8 0.1 0.022 2.3 9 38 .] 34 62 .. 24 62 .. 0.78 2 ? 1.8 0.0 7.7 8e+02 4 28 .. 69 95 .. 66 102 .. 0.76 3 ? 9.9 0.5 0.021 2.2 2 37 .. 147 191 .. 146 191 .. 0.61 Alignments for each domain: == domain 1 score: 9.8 bits; conditional E-value: 0.022 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 H ++v ++ + g+ lasGs D t+++++ tr|C3Y1C2|C3Y1C2_BRAFL 34 SHtGCVKAV--ASGGHVLASGSTDETIHLYN 62 575557777..888999************97 PP == domain 2 score: 1.8 bits; conditional E-value: 7.7 EEEEESSSSEEEEE.EETTSSE..EEEE CS WD40 4 lrtltGHssvtsla.fspdgaw..lasG 28 l+tl H +v +l +sp g++ +++G tr|C3Y1C2|C3Y1C2_BRAFL 69 LGTLLQH-DVADLIhWSPKGDMyaVVTG 95 6677778.7878879*****99766666 PP == domain 3 score: 9.9 bits; conditional E-value: 0.021 EEEEEEESS.SSEEEEE.......EETTSSE......EEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtsla.......fspdgaw......lasGsdDgtvriW 37 +c+ +++H + + sl ++ +s Dg +++W tr|C3Y1C2|C3Y1C2_BRAFL 147 TCTCDFSAHeNRIKSLVcvrdhrsDA----GetdllmVSISS-DGFIKVW 191 78889999*87765554333554433....133443244467.******* PP >> tr|C3ZL20|C3ZL20_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_125552 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 11.6 0.1 0.0061 0.64 3 38 .] 332 367 .. 321 367 .. 0.76 2 ? 9.5 0.1 0.029 3 2 38 .] 372 410 .. 371 410 .. 0.79 3 ? 2.5 0.0 4.5 4.7e+02 12 29 .. 479 496 .. 464 507 .. 0.77 Alignments for each domain: == domain 1 score: 11.6 bits; conditional E-value: 0.0061 EEEEEESSSSEEEEE.........EETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGHssvtsla.........fspdgawlasGsdDgtvriWd 38 c v+sl+ fs+d++ l s +dDg v++Wd tr|C3ZL20|C3ZL20_BRAFL 332 C---------VSSLKmnsdvsagtFSKDSRHLYSVGDDGEVYVWD 367 3.........44444555555666*********9999*******9 PP == domain 2 score: 9.5 bits; conditional E-value: 0.029 EEEEEEE....SSSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtlt....GHssvtslafspdgawlasGsdDgtvriWd 38 +c++++ +H t +a s+++++la+Gs g v i+d tr|C3ZL20|C3ZL20_BRAFL 372 DCIHKFVdegcTH--ATTIALSHNSKYLATGSQSGVVNIYD 410 5777775343344..788889******************98 PP == domain 3 score: 2.5 bits; conditional E-value: 4.5 SEEEEEEETTSSEEEEEE CS WD40 12 svtslafspdgawlasGs 29 v +l+fsp++ +la G tr|C3ZL20|C3ZL20_BRAFL 479 RVQCLDFSPHSGYLAMGN 496 499**********98664 PP >> tr|C3YMT5|C3YMT5_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_117030 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 6.7 0.0 0.21 22 14 36 .. 18 40 .. 11 40 .. 0.89 2 ? 2.9 0.0 3.5 3.6e+02 5 37 .. 66 99 .. 63 100 .. 0.76 3 ? 3.9 0.0 1.7 1.8e+02 15 38 .] 162 185 .. 153 185 .. 0.87 Alignments for each domain: == domain 1 score: 6.7 bits; conditional E-value: 0.21 EEEEEETTSSEEEEEETTSEEEE CS WD40 14 tslafspdgawlasGsdDgtvri 36 ++la+++++ ++a+G++Dg +++ tr|C3YMT5|C3YMT5_BRAFL 18 RALAWNREQGYIACGGEDGLLKV 40 7899***************9986 PP == domain 2 score: 2.9 bits; conditional E-value: 3.5 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +tl+GH + v + ++ + + l++++ g + +W tr|C3YMT5|C3YMT5_BRAFL 66 QTLEGHsGAVQVCTWNEHFQKLTTSDQYGLIIVW 99 689***5559666477777779998889999999 PP == domain 3 score: 3.9 bits; conditional E-value: 1.7 EEEEETTSSEEEEEETTSEEEEEE CS WD40 15 slafspdgawlasGsdDgtvriWd 38 +a+spdg+ l+ G+ +g + i+d tr|C3YMT5|C3YMT5_BRAFL 162 NVAWSPDGKSLIFGMTNGEIQIFD 185 689*******98898899999987 PP >> tr|C3Y0U0|C3Y0U0_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_89920 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 14.1 0.0 0.001 0.11 3 38 .] 341 377 .. 339 377 .. 0.90 2 ? 3.5 0.0 2.3 2.4e+02 9 32 .. 429 455 .. 423 458 .. 0.80 Alignments for each domain: == domain 1 score: 14.1 bits; conditional E-value: 0.001 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +l +l H + v+s+a+++ g+++a+++ D+ +++d tr|C3Y0U0|C3Y0U0_BRAFL 341 PLAKLLSHvTAVRSIAVDKTGTYMATSGQDRYMKVFD 377 67777889889***********************998 PP == domain 2 score: 3.5 bits; conditional E-value: 2.3 SS...SSEEEEEEETTSSEEEEEETTS CS WD40 9 GH...ssvtslafspdgawlasGsdDg 32 +H +++t+l+f+p+ + l G+ Dg tr|C3Y0U0|C3Y0U0_BRAFL 429 THrlrNNITGLQFCPYEDVLGVGHQDG 455 5766667***********994588887 PP >> tr|C3ZA96|C3ZA96_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_124957 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.5 0.0 8.8e-05 0.0091 4 37 .. 7 42 .. 4 43 .. 0.83 Alignments for each domain: == domain 1 score: 17.5 bits; conditional E-value: 8.8e-05 EEEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawla.sGsdDgtvriW 37 ++ l+ H +sv+++af+p ++l+ sG +Dg+v ++ tr|C3ZA96|C3ZA96_BRAFL 7 VQFLRHHqGSVRGVAFCPRDRYLFcSGAYDGKVNLY 42 5668889888************9736678****987 PP >> tr|C3Y230|C3Y230_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_115272 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 7.1 0.0 0.17 18 13 37 .. 54 80 .. 47 81 .. 0.85 2 ? 3.5 0.0 2.4 2.4e+02 19 38 .] 185 204 .. 170 204 .. 0.76 3 ? 8.7 0.0 0.051 5.3 10 38 .] 228 257 .. 219 257 .. 0.80 Alignments for each domain: == domain 1 score: 7.1 bits; conditional E-value: 0.17 E.EEEEEETTSSEE.EEEETTSEEEEE CS WD40 13 v.tslafspdgawl.asGsdDgtvriW 37 v ++++ s+dg++l ++G++++ vr + tr|C3Y230|C3Y230_BRAFL 54 VsNCVRSSRDGQYLmVTGTYKPRVRCY 80 669**********84599999999976 PP == domain 2 score: 3.5 bits; conditional E-value: 2.4 ETTSSEEEEEETTSEEEEEE CS WD40 19 spdgawlasGsdDgtvriWd 38 +p ++++a+G+ g + Wd tr|C3Y230|C3Y230_BRAFL 185 NPVHHLFACGTVEGRIECWD 204 5555559***9********9 PP == domain 3 score: 8.7 bits; conditional E-value: 0.051 SSS...EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 Hss...vtslafspdgawlasGsdDgtvriWd 38 H ++s+ f++ +++++s +d + ++iW+ tr|C3Y230|C3Y230_BRAFL 228 H-YglpINSIEFNDPQDLVLS-TDSKILKIWN 257 4.1355**************6.55*******8 PP >> tr|C3YW17|C3YW17_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=GDF8 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 1.9 0.1 7.1 7.4e+02 13 37 .. 126 151 .. 111 151 .. 0.73 2 ? 10.3 0.0 0.016 1.7 6 38 .] 172 208 .. 164 208 .. 0.79 3 ! 14.7 1.0 0.00065 0.068 4 38 .] 262 298 .. 259 298 .. 0.83 Alignments for each domain: == domain 1 score: 1.9 bits; conditional E-value: 7.1 EEEEEEETTSSEEE.EEETTSEEEEE CS WD40 13 vtslafspdgawla.sGsdDgtvriW 37 ts++++ + l+ ++s D t+ iW tr|C3YW17|C3YW17_BRAFL 126 LTSFDWNEVDPNLLgTSSIDTTCTIW 151 5777555555557756789******9 PP == domain 2 score: 10.3 bits; conditional E-value: 0.016 EEESS.SSEEEEEEETTSSE...EEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgaw...lasGsdDgtvriWd 38 l +H + v+++afs+ g +as + Dg+vr++d tr|C3YW17|C3YW17_BRAFL 172 QLIAHdKEVYDIAFSRAGGGrdmFASVGADGSVRMFD 208 36799888****88877777997666566*****998 PP == domain 3 score: 14.7 bits; conditional E-value: 0.00065 EEEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 + l H +v+++a+ p+++ ++ ++ dD+ iWd tr|C3YW17|C3YW17_BRAFL 262 VARLNNHrACVNGMAWAPHSSCHIcTSADDHQALIWD 298 5667789888************8725569*******9 PP >> tr|C3Y9G8|C3Y9G8_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_118626 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 6.3 0.1 0.29 30 12 38 .] 63 89 .. 55 89 .. 0.84 2 ? 6.4 0.0 0.28 29 13 38 .] 106 131 .. 94 131 .. 0.78 3 ? 3.1 0.1 3 3.1e+02 10 38 .] 328 347 .. 320 347 .. 0.77 Alignments for each domain: == domain 1 score: 6.3 bits; conditional E-value: 0.29 SEEEEEEETTSSEEEEE.ETTSEEEEEE CS WD40 12 svtslafspdgawlasG.sdDgtvriWd 38 vt+++++p+ + la G +g v +W+ tr|C3Y9G8|C3Y9G8_BRAFL 63 QVTCMSWQPNYRVLAMGwE-NGDVLMWN 89 3************977666.99999998 PP == domain 2 score: 6.4 bits; conditional E-value: 0.28 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 v l +s +g+ l+sG+++g + +W+ tr|C3Y9G8|C3Y9G8_BRAFL 106 VAILEWSTNGTRLLSGDKNGLITVWK 131 43344********************5 PP == domain 3 score: 3.1 bits; conditional E-value: 3 SSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 HssvtslafspdgawlasGsdDgtvriWd 38 sv+++ la G+ g+v +W+ tr|C3Y9G8|C3Y9G8_BRAFL 328 E-SVNCV--------LAGGTTEGKVVMWK 347 3.6****........*97778*******5 PP >> tr|C3YX75|C3YX75_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_281464 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 13.6 0.2 0.0015 0.15 9 38 .] 5 36 .. 2 36 .. 0.61 2 ? 6.5 0.1 0.26 27 7 31 .. 52 76 .. 46 93 .. 0.73 Alignments for each domain: == domain 1 score: 13.6 bits; conditional E-value: 0.0015 SS.SSEEEEEEETTSSE..EEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgaw..lasGsdDgtvriWd 38 GH + v l +p + l++G+ Dg+v++Wd tr|C3YX75|C3YX75_BRAFL 5 GHtDEVFVLEAHPTDPHvlLSAGH-DGHVMVWD 36 663335555555555552134566.*******9 PP == domain 2 score: 6.5 bits; conditional E-value: 0.26 EESSSSEEEEEEETTSSEEEEEETT CS WD40 7 ltGHssvtslafspdgawlasGsdD 31 GH+ v +++fsp g +a+ + tr|C3YX75|C3YX75_BRAFL 52 GQGHGAVFDCKFSPTGMHFAATDSH 76 569988************9863223 PP >> tr|C3Z7I1|C3Z7I1_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_275418 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 1.7 0.0 8.1 8.5e+02 14 38 .] 219 244 .. 207 244 .. 0.73 2 ? 4.4 0.2 1.2 1.2e+02 9 38 .] 260 292 .. 253 292 .. 0.67 3 ? 9.9 0.0 0.022 2.2 6 38 .] 358 391 .. 354 391 .. 0.77 Alignments for each domain: == domain 1 score: 1.7 bits; conditional E-value: 8.1 EEEEEETTSSE.EEEEETTSEEEEEE CS WD40 14 tslafspdgaw.lasGsdDgtvriWd 38 +l ++p + l+ G+++g + Wd tr|C3Z7I1|C3Z7I1_BRAFL 219 VCLEYNPKDSHiLMGGCYNGQIAYWD 244 488866666661567789****9998 PP == domain 2 score: 4.4 bits; conditional E-value: 1.2 SS.SSEEEEEEETTSSE........EEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgaw........lasGsdDgtvriWd 38 H ++v+ + w +++s Dg v Wd tr|C3Z7I1|C3Z7I1_BRAFL 260 SHrDPVYKV------IWlqsktgteCFTASTDGQVLWWD 292 456668888......6644444455456777*******9 PP == domain 3 score: 9.9 bits; conditional E-value: 0.022 EEESS.SSEEEEE..EETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtsla..fspdgawlasGsdDgtvriWd 38 +tGH +++++l+ +++l + + D t riW+ tr|C3Z7I1|C3Z7I1_BRAFL 358 LYTGHhGPIYALQrnPFFPKNFL-TVG-DWTARIWS 391 589**999****99744455666.678.*******5 PP >> tr|C3Y926|C3Y926_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_68137 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 8.2 0.7 0.074 7.8 3 38 .] 181 218 .. 179 218 .. 0.72 2 ? 10.3 0.3 0.017 1.7 8 38 .] 231 263 .. 221 263 .. 0.68 3 ? 6.7 0.0 0.22 22 20 37 .. 346 364 .. 314 365 .. 0.83 Alignments for each domain: == domain 1 score: 8.2 bits; conditional E-value: 0.074 EEEEEESS.SS..EEEEEEETTSSE.....EEEEETTSEEEEEE CS WD40 3 clrtltGH.ss..vtslafspdgaw.....lasGsdDgtvriWd 38 ++ +t+H + ++++ ++ + sG+dD+ ++ Wd tr|C3Y926|C3Y926_BRAFL 181 TVSQWTAHdFEawICAF------NYwepttVYSGGDDCRLKGWD 218 56677899522679999......4445555669********998 PP == domain 2 score: 10.3 bits; conditional E-value: 0.017 ESS.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtsla.fspdgawlasGsdDgtvriWd 38 ++H +v s+ +++ + la+Gs+D +v +Wd tr|C3Y926|C3Y926_BRAFL 231 KAHdMGVVSIHsNCHQEHRLATGSYDEHVLLWD 263 567434667754333333489***********9 PP == domain 3 score: 6.7 bits; conditional E-value: 0.22 TTSSEEEEEE.TTSEEEEE CS WD40 20 pdgawlasGs.dDgtvriW 37 p +++las+s +D+++ +W tr|C3Y926|C3Y926_BRAFL 346 PGKPLLASCSfYDHSLQLW 364 77788**99768******* PP >> tr|C3Y7A4|C3Y7A4_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_82831 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.4 1.0 0.00019 0.02 4 38 .] 279 341 .. 277 341 .. 0.67 Alignments for each domain: == domain 1 score: 16.4 bits; conditional E-value: 0.00019 EEEEESS.SSEEEEEEETTSSEEEE...................EET.........TSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlas...................Gsd.........DgtvriWd 38 +r++ GH ss+ +la++p g +++s G +++vr+Wd tr|C3Y7A4|C3Y7A4_BRAFL 279 QRHYLGHnSSIQCLAVHPAGVLVTSgqvmgvnrreqisvyekfdG-FygtpdpnwyKPHVRVWD 341 89*****888************98844444444444444444442.034445555688888887 PP >> tr|C3YWN0|C3YWN0_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_275183 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 5.3 0.0 0.63 66 7 34 .. 179 207 .. 172 208 .. 0.87 2 ? 5.5 0.0 0.52 54 12 34 .. 231 253 .. 216 257 .. 0.77 3 ? 3.2 0.0 2.8 2.9e+02 13 38 .] 317 342 .. 310 342 .. 0.68 Alignments for each domain: == domain 1 score: 5.3 bits; conditional E-value: 0.63 EESS.SSEEEEEEETTSSEEEEEETTSEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtv 34 + +H s+ +l+f+ g+ la++s++gtv tr|C3YWN0|C3YWN0_BRAFL 179 IPAHdSPLAALQFNAPGTKLATASEKGTV 207 568988899******************98 PP == domain 2 score: 5.5 bits; conditional E-value: 0.52 SEEEEEEETTSSEEEEEETTSEE CS WD40 12 svtslafspdgawlasGsdDgtv 34 s++slafs d+ +l+++s tv tr|C3YWN0|C3YWN0_BRAFL 231 SIYSLAFSMDSVFLCASSNTETV 253 4899**********988855555 PP == domain 3 score: 3.2 bits; conditional E-value: 2.8 EEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 13 vtsla.fspdgawlasGsdDgtvriWd 38 +++la s+ ++l+++ Dg ++i++ tr|C3YWN0|C3YWN0_BRAFL 317 ICALAiISKLPRLLVASA-DGYLYIYN 342 555554444555677555.******97 PP >> tr|C3YFA9|C3YFA9_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_121654 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 2.4 0.1 5 5.3e+02 12 38 .] 42 74 .. 31 74 .. 0.73 2 ? 10.4 0.1 0.015 1.5 4 38 .] 123 157 .. 120 157 .. 0.86 3 ? 2.8 0.0 3.8 4e+02 17 37 .. 224 244 .. 220 244 .. 0.88 4 ? 4.8 0.2 0.88 92 7 37 .. 305 336 .. 296 337 .. 0.81 Alignments for each domain: == domain 1 score: 2.4 bits; conditional E-value: 5 S.EEEEE.....EETTSSEEEEEETTSEEEEEE CS WD40 12 s.vtsla.....fspdgawlasGsdDgtvriWd 38 + v+ ++ f++ g+ +++G+ g+++++d tr|C3YFA9|C3YFA9_BRAFL 42 PhVRTVRflhtaFDSTGNSFIAGDHQGNIYMFD 74 3466666666779999999999*88***99987 PP == domain 2 score: 10.4 bits; conditional E-value: 0.015 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + +GH +v+ ++ + +g++ +s+s t +Wd tr|C3YFA9|C3YFA9_BRAFL 123 IAQMKGHdAGVHTISLHASGRYAISSS-SDTAQLWD 157 56679**777************99999.99999998 PP == domain 3 score: 2.8 bits; conditional E-value: 3.8 EEETTSSEEEEEETTSEEEEE CS WD40 17 afspdgawlasGsdDgtvriW 37 a ++dg++la+G++ + +++W tr|C3YFA9|C3YFA9_BRAFL 224 ACPRDGRLLAAGGKSNFLHLW 244 5689*********99999999 PP == domain 4 score: 4.8 bits; conditional E-value: 0.88 EESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriW 37 H + +t dg+ +++ ++Dg++ ++ tr|C3YFA9|C3YFA9_BRAFL 305 VGSHdNRITNALIGADGRHVVCTMEDGSINVY 336 557977798777999*****98899****997 PP >> tr|C3XXZ1|C3XXZ1_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_233522 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.9 0.1 1.7 1.8e+02 12 25 .. 88 103 .. 64 118 .. 0.70 2 ? 8.5 0.0 0.059 6.1 11 38 .] 150 178 .. 140 178 .. 0.84 3 ? 7.0 1.4 0.18 18 13 38 .] 233 275 .. 223 275 .. 0.55 Alignments for each domain: == domain 1 score: 3.9 bits; conditional E-value: 1.7 S..EEEEEEETTSSEE CS WD40 12 s..vtslafspdgawl 25 + +t+++++p+ + + tr|C3XXZ1|C3XXZ1_BRAFL 88 DktITCMDWHPNLKGV 103 2559999999987765 PP == domain 2 score: 8.5 bits; conditional E-value: 0.059 SSEEEEEEETTSSEEEEEE.TTSEEEEEE CS WD40 11 ssvtslafspdgawlasGs.dDgtvriWd 38 +++ s++f+p+ + +++G+ +g v +Wd tr|C3XXZ1|C3XXZ1_BRAFL 150 DDIFSFQFNPSDPNIIAGGcINGQVVLWD 178 569999*********999626*******9 PP == domain 3 score: 7.0 bits; conditional E-value: 0.18 EEEEEEETTSSE........................EEEEETTSEEEEEE CS WD40 13 vtslafspdgaw........................lasGsdDgtvriWd 38 +t+++ w l++++ D v++Wd tr|C3XXZ1|C3XXZ1_BRAFL 233 ITDIQ------WipdhfeinryglpvynkhgdcsqiLTCAG-DSCVMVWD 275 66664......333333344444444444444466355557.*******9 PP >> tr|C3Z8X0|C3Z8X0_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_236712 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 8.8 0.0 0.047 4.9 6 35 .. 329 361 .. 324 364 .. 0.82 2 ? 1.9 0.0 7.5 7.8e+02 14 34 .. 509 523 .. 491 525 .. 0.79 Alignments for each domain: == domain 1 score: 8.8 bits; conditional E-value: 0.047 EEESS...SSEEEEEEETTSSEEEEEETTSEEE CS WD40 6 tltGH...ssvtslafspdgawlasGsdDgtvr 35 +++ H ++v +l +++g+ l++GsdDg v tr|C3Z8X0|C3Z8X0_BRAFL 329 IYRHHmhqGPVLHLMHDREGKVLVTGSDDGYVF 361 6777766556********************996 PP == domain 2 score: 1.9 bits; conditional E-value: 7.5 EEEEEETTSSEEEEEETTSEE CS WD40 14 tslafspdgawlasGsdDgtv 34 t++ +wlas+s Dg v tr|C3Z8X0|C3Z8X0_BRAFL 509 THQ------QWLASCSPDGRV 523 556......9******99987 PP >> tr|C3Z7Q0|C3Z7Q0_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_119014 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 2.7 0.0 4 4.1e+02 9 34 .. 183 209 .. 178 214 .. 0.83 2 ! 12.8 0.0 0.0027 0.28 2 37 .. 219 257 .. 218 257 .. 0.82 Alignments for each domain: == domain 1 score: 2.7 bits; conditional E-value: 4 SS.SSEEEEEEETTSSEEEEEETTSEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtv 34 +H + t++ + g+ la++s++gt+ tr|C3Z7Q0|C3Z7Q0_BRAFL 183 AHeGALTCITMNLQGTRLATASEKGTL 209 6866699**98889999****988876 PP == domain 2 score: 12.8 bits; conditional E-value: 0.0027 EEEEEEE.SS.SS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtlt.GH.ss.vtslafspdgawlasGsdDgtvriW 37 q+l++l+ G s ++++ f++d ++l+ +sd gtv+i+ tr|C3Z7Q0|C3Z7Q0_BRAFL 219 QLLHELRrGTgSAqIYCMNFNQDASLLCVSSDHGTVHIF 257 67888865664336*************999999999985 PP >> tr|C3YNZ8|C3YNZ8_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_86354 PE=4 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 8.5 0.0 0.059 6.1 12 36 .. 36 60 .. 18 60 .. 0.78 2 ? 7.3 0.0 0.14 14 5 36 .. 72 111 .. 68 111 .. 0.67 Alignments for each domain: == domain 1 score: 8.5 bits; conditional E-value: 0.059 SEEEEE.EETTSSEEEEEETTSEEEE CS WD40 12 svtsla.fspdgawlasGsdDgtvri 36 sv+++a ++ +g++++ G Dg+vr+ tr|C3YNZ8|C3YNZ8_BRAFL 36 SVCAIAwYDEHGKFVI-GYSDGKVRM 60 4999988888888876.*55****96 PP == domain 2 score: 7.3 bits; conditional E-value: 0.14 EEEESSSS......E..EEEE.EETTSSEEEEEETTSEEEE CS WD40 5 rtltGHss......v..tsla.fspdgawlasGsdDgtvri 36 +t+++H + v +++a ++ +g++++ G Dg+vr+ tr|C3YNZ8|C3YNZ8_BRAFL 72 KTIEAHEHlvyyfpVpmCAIAwYDEHGKFVI-GYSDGKVRM 111 5666664454455555467777888888886.*55****96 PP >> tr|C3Y4L7|C3Y4L7_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_73888 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.9 0.1 1.7 1.8e+02 10 36 .. 359 384 .. 348 386 .. 0.61 2 ? 8.6 0.2 0.057 6 10 38 .] 399 428 .. 387 428 .. 0.82 3 ? 3.2 0.0 2.8 2.9e+02 2 38 .] 472 514 .. 471 514 .. 0.73 Alignments for each domain: == domain 1 score: 3.9 bits; conditional E-value: 1.7 SSSEEEEE.EETTSSEEEEEETTSEEEE CS WD40 10 Hssvtsla.fspdgawlasGsdDgtvri 36 + v++l + d+ w +Gs D t+++ tr|C3Y4L7|C3Y4L7_BRAFL 359 NNRVCCLLaVGTDQVW--AGSFDTTIYV 384 3569888344444445..3666999987 PP == domain 2 score: 8.6 bits; conditional E-value: 0.057 SSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 Hss.vtslafspdgawlasGsdDgtvriWd 38 H + v++l s+dg+ + s+s +g + +W+ tr|C3Y4L7|C3Y4L7_BRAFL 399 HVDmVSDLTISQDGSTVYSASLNGQIILWS 428 533699***********************5 PP == domain 3 score: 3.2 bits; conditional E-value: 2.8 EEEEEEE....SSSS..EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtlt....GHss..vtslafspdgawlasGsdDgtvriWd 38 ++l+tl+ G s+ + ++ s+dg a+++ g + +Wd tr|C3Y4L7|C3Y4L7_BRAFL 472 ETLHTLEmkdeGNSPlqIECFLLSQDGMIWAASGNSGRLTVWD 514 56777755455776688999998888888665555*******8 PP >> tr|C3Y5V0|C3Y5V0_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_126223 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 1.7 0.1 8.2 8.5e+02 3 38 .] 46 92 .. 44 92 .. 0.70 2 ? 11.3 0.3 0.008 0.84 10 38 .] 763 790 .. 755 790 .. 0.80 Alignments for each domain: == domain 1 score: 1.7 bits; conditional E-value: 8.2 EEEEEESS.SSEEEEE.....EETTSSE..........EEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtsla.....fspdgaw..........lasGsdDgtvriWd 38 ++tl+ H ++v ++ + las++ g + +Wd tr|C3Y5V0|C3Y5V0_BRAFL 46 VIQTLDRHkTNVVKVKwarenY-----HhdlnlpytlrLASADSHGRIVVWD 92 5678888966688996444443.....355555888889999559******9 PP == domain 2 score: 11.3 bits; conditional E-value: 0.008 S.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvriWd 38 + +t++a+ d l G+ Dg++ iWd tr|C3Y5V0|C3Y5V0_BRAFL 763 TmGAITCIAWKGDTMVL--GDVDGNINIWD 790 4456****777776666..**********9 PP >> tr|C3YHX4|C3YHX4_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_71611 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 12.7 0.0 0.0028 0.29 14 38 .] 78 103 .. 67 103 .. 0.89 2 ? 9.6 0.0 0.026 2.7 13 38 .] 433 459 .. 422 459 .. 0.67 Alignments for each domain: == domain 1 score: 12.7 bits; conditional E-value: 0.0028 EEEEEETTSSEEE.EEETTSEEEEEE CS WD40 14 tslafspdgawla.sGsdDgtvriWd 38 t+++fsp + la +G+d g+v +Wd tr|C3YHX4|C3YHX4_BRAFL 78 TCCCFSPTRPTLAfAGTDHGSVVVWD 103 9***********889**********9 PP == domain 2 score: 9.6 bits; conditional E-value: 0.026 EEEEE..EETTSSEEEEEETTSEEEEEE CS WD40 13 vtsla..fspdgawlasGsdDgtvriWd 38 vt+++ +l++++ Dg+vr+++ tr|C3YHX4|C3YHX4_BRAFL 433 VTAIDfcPFGFDYFLVACG-DGSVRLYN 459 6666533222233477899.******97 PP >> tr|C3Z291|C3Z291_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_121302 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 6.1 0.0 0.35 36 8 36 .. 389 419 .. 382 420 .. 0.70 2 ? 6.2 0.0 0.31 32 4 38 .] 428 463 .. 425 463 .. 0.85 Alignments for each domain: == domain 1 score: 6.1 bits; conditional E-value: 0.35 ESS.SSEEEEEEETTSSEE.EEEETTSEEEE CS WD40 8 tGH.ssvtslafspdgawl.asGsdDgtvri 36 + H + +++++fs + l +++s D+t++i tr|C3Z291|C3Z291_BRAFL 389 SVHsKAIRDICFSGRVDGLmLTASVDKTLKI 419 6797779988755555554238999****98 PP == domain 2 score: 6.2 bits; conditional E-value: 0.31 EEEEESSSSEEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGHssvtsla.fspdgawlasGsdDgtvriWd 38 ++t+ ++++v++++ ++ d++++ +G +g+v ++d tr|C3Z291|C3Z291_BRAFL 428 VQTYQTQFPVWACCwNQEDNNYVYAGLQNGSVLVFD 463 678988889*988878889999*99*99****9998 PP >> tr|C3ZM38|C3ZM38_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_216270 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 5.3 0.0 0.62 65 6 37 .. 77 109 .. 73 109 .. 0.81 2 ? 5.1 0.0 0.72 75 12 35 .. 127 150 .. 119 151 .. 0.86 Alignments for each domain: == domain 1 score: 5.3 bits; conditional E-value: 0.62 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriW 37 l+GH s v ++++ + la+++ +g + +W tr|C3ZM38|C3ZM38_BRAFL 77 NLRGHnSEVVLVRWNEPYQKLATCDGNGVIFVW 109 589**5559899888888889***66******* PP == domain 2 score: 5.1 bits; conditional E-value: 0.72 SEEEEEEETTSSEEEEEETTSEEE CS WD40 12 svtslafspdgawlasGsdDgtvr 35 +v+++ +s+dg++ + + +Dg v tr|C3ZM38|C3ZM38_BRAFL 127 PVSDFNWSHDGRLALICYRDGFVL 150 699**********888*99*9885 PP >> tr|C3ZJB1|C3ZJB1_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_216389 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 12.5 0.0 0.0033 0.35 6 37 .. 222 254 .. 217 255 .. 0.73 Alignments for each domain: == domain 1 score: 12.5 bits; conditional E-value: 0.0033 EEESS.SSEEEEEEETTSSEEEEEE.TTSEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGs.dDgtvriW 37 + +H +v ++afspdg+ la+ s +++ +W tr|C3ZJB1|C3ZJB1_BRAFL 222 I-AAHgAPVMAVAFSPDGRHLATYSyQENKLLFW 254 4.589888*************9744246666666 PP >> tr|C3Z075|C3Z075_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_85660 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 2.6 0.1 4.2 4.4e+02 11 38 .] 632 658 .. 618 658 .. 0.80 2 ? 7.9 0.0 0.094 9.8 5 34 .. 669 702 .. 666 702 .. 0.84 Alignments for each domain: == domain 1 score: 2.6 bits; conditional E-value: 4.2 SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriWd 38 +s++++a + +g+ ++ +++ g +++++ tr|C3Z075|C3Z075_BRAFL 632 FSIRGVASDCEGNVVL-ADWYGRIKVYN 658 3599************.8********97 PP == domain 2 score: 7.9 bits; conditional E-value: 0.094 EEEESSSS....EEEEEEETTSSEEEEEETTSEE CS WD40 5 rtltGHss....vtslafspdgawlasGsdDgtv 34 rt+++H + +++++++p g+ ++++++D+ v tr|C3Z075|C3Z075_BRAFL 669 RTFRTHRGvyanIRGISVDPFGRIIVASTRDNRV 702 7999993346779*************99999876 PP >> tr|C3YKV1|C3YKV1_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_198934 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 2.8 0.0 3.7 3.8e+02 13 38 .] 68 98 .. 57 98 .. 0.68 2 ? 6.7 0.0 0.22 23 9 37 .. 119 149 .. 109 150 .. 0.82 Alignments for each domain: == domain 1 score: 2.8 bits; conditional E-value: 3.7 EEEEE.EETTSSEEEEEET....TSEEEEEE CS WD40 13 vtsla.fspdgawlasGsd....DgtvriWd 38 +t+l+ + + g +++ G+d ++ +++W+ tr|C3YKV1|C3YKV1_BRAFL 68 ITHLCqVKQQGILVTVGDDepgtNPIIKVWN 98 66666556667777677556666*******8 PP == domain 2 score: 6.7 bits; conditional E-value: 0.22 SS..SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 9 GH..ssvtslafspdgawlasGsdDgtvriW 37 G s+v++la++ + +++a G Dgtv ++ tr|C3YKV1|C3YKV1_BRAFL 119 GKeaSPVSALAVHENLNLMAIGFQDGTVVVY 149 554467**********************997 PP >> tr|C3Z2E8|C3Z2E8_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=Msx1 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 4.9 0.0 0.82 86 2 38 .] 414 450 .. 413 450 .. 0.72 2 ? 6.5 0.0 0.26 27 17 38 .] 539 570 .. 525 570 .. 0.71 Alignments for each domain: == domain 1 score: 4.9 bits; conditional E-value: 0.82 EEEEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 q+ +t+t H s+v+ + + ++ ++ + + ++vr W+ tr|C3Z2E8|C3Z2E8_BRAFL 414 QLFQTFTVHrSPVCKV--MLSEKYlVSVCAEYNHVRTWN 450 67899****999*999..2233331344788*****998 PP == domain 2 score: 6.5 bits; conditional E-value: 0.26 E..........EETTSSEEEEEETTSEEEEEE CS WD40 17 a..........fspdgawlasGsdDgtvriWd 38 + s+ ++l++G+ +g++ +Wd tr|C3Z2E8|C3Z2E8_BRAFL 539 CvhecegssrmGSRPRRYLFTGHANGSIQMWD 570 4445555555566667789************9 PP >> tr|C3YZB8|C3YZB8_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_119103 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 5.4 0.0 0.56 59 13 37 .. 178 200 .. 167 201 .. 0.74 2 ? 4.0 0.0 1.6 1.7e+02 22 36 .. 242 256 .. 211 256 .. 0.87 3 ? 2.3 0.1 5.5 5.7e+02 3 37 .. 324 359 .. 322 360 .. 0.77 Alignments for each domain: == domain 1 score: 5.4 bits; conditional E-value: 0.56 EEEEEEETTSSEEEEEETTSEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriW 37 ++s+a +g+++++G+ +g++ W tr|C3YZB8|C3YZB8_BRAFL 178 INSIAI--SGDYILTGMGNGSILQW 200 666644..677888**66******9 PP == domain 2 score: 4.0 bits; conditional E-value: 1.6 SSEEEEEETTSEEEE CS WD40 22 gawlasGsdDgtvri 36 ++++++G++Dg v+i tr|C3YZB8|C3YZB8_BRAFL 242 HDFVVTGGRDGLVYI 256 5679*******9987 PP == domain 3 score: 2.3 bits; conditional E-value: 5.5 EEEEEE...SS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtlt...GH.ssvtslafspdgawlasGsdDgtvriW 37 ++++++ +H + v s+ +d+a+ s s D ++ +W tr|C3YZB8|C3YZB8_BRAFL 324 PTHHYRlqgAHfKTVKSVVQTQDKAL--SYS-DSKLLLW 359 78999777799888999977777777..446.9999888 PP >> tr|C3Y4D1|C3Y4D1_BRAFL Vacuolar protein sorting-associated protein 41 homolog OS=Branchiostoma floridae OX=7739 GN=B # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.9 0.0 0.0051 0.53 6 34 .. 88 117 .. 83 119 .. 0.88 Alignments for each domain: == domain 1 score: 11.9 bits; conditional E-value: 0.0051 EEESS.SSEEEEEEETTSSEEEEEETTSEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtv 34 ++ H + v+ ++ +++g+ +as+sdDg+v tr|C3Y4D1|C3Y4D1_BRAFL 88 EYAVHqTTVNQISLDQNGDNMASCSDDGKV 117 67789777********************98 PP >> tr|C3YL56|C3YL56_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_84773 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.3 0.0 0.033 3.5 12 37 .. 242 271 .. 232 271 .. 0.69 Alignments for each domain: == domain 1 score: 9.3 bits; conditional E-value: 0.033 SEEEEE.....EETTSSE....EEEEETTSEEEEE CS WD40 12 svtsla.....fspdgaw....lasGsdDgtvriW 37 ++t+la + +a G+ Dgt+ iW tr|C3YL56|C3YL56_BRAFL 242 CITCLAwvqeqN-----NppggIAFGHLDGTISIW 271 49***7444443.....36666555********** PP >> tr|C3Z8N1|C3Z8N1_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_67907 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.6 0.0 0.027 2.8 13 38 .] 123 153 .. 113 153 .. 0.75 Alignments for each domain: == domain 1 score: 9.6 bits; conditional E-value: 0.027 EEEEEEETTSSEEE.EEET....TSEEEEEE CS WD40 13 vtslafspdgawla.sGsd....DgtvriWd 38 +sla++p+ + ++ +G d D +v +Wd tr|C3Z8N1|C3Z8N1_BRAFL 123 CNSLAWHPNESNMLaAGLDkyrsDSSVLVWD 153 689*********65166234556*******9 PP >> tr|C3YN27|C3YN27_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_97935 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.3 0.0 0.033 3.4 12 37 .. 235 264 .. 225 264 .. 0.69 Alignments for each domain: == domain 1 score: 9.3 bits; conditional E-value: 0.033 SEEEEE.....EETTSSE....EEEEETTSEEEEE CS WD40 12 svtsla.....fspdgaw....lasGsdDgtvriW 37 ++t+la + +a G+ Dgt+ iW tr|C3YN27|C3YN27_BRAFL 235 CITCLAwvqeqN-----NppggIAFGHLDGTISIW 264 49***7444443.....36666555********** PP >> tr|C3YDK3|C3YDK3_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_84409 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.9 0.2 0.01 1.1 23 38 .] 226 241 .. 167 241 .. 0.85 Alignments for each domain: == domain 1 score: 10.9 bits; conditional E-value: 0.01 SEEEEEETTSEEEEEE CS WD40 23 awlasGsdDgtvriWd 38 ++l+sG++Dg++++Wd tr|C3YDK3|C3YDK3_BRAFL 226 DLLVSGHEDGSIKFWD 241 4499***********9 PP >> tr|C3YF41|C3YF41_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_85176 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.8 0.0 0.011 1.2 19 38 .] 187 206 .. 176 206 .. 0.81 Alignments for each domain: == domain 1 score: 10.8 bits; conditional E-value: 0.011 ETTSSEEEEEETTSEEEEEE CS WD40 19 spdgawlasGsdDgtvriWd 38 + +++w++s++ Dg vr++d tr|C3YF41|C3YF41_BRAFL 187 NGSQHWVLSSCTDGQVRLYD 206 556789987777******98 PP >> tr|C3XUW3|C3XUW3_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_88922 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 8.4 0.0 0.066 6.8 5 37 .. 460 503 .. 456 504 .. 0.74 Alignments for each domain: == domain 1 score: 8.4 bits; conditional E-value: 0.066 EEEESS.SSEEEEE..........EETTSSEEEEEETTSEEEEE CS WD40 5 rtltGH.ssvtsla..........fspdgawlasGsdDgtvriW 37 +++G+ ++v+ +a + p+g++l++ s+D+tv i+ tr|C3XUW3|C3XUW3_BRAFL 460 SIFSGQgKFVRKVAtelrriyriaVGPEGRLLVTDSKDNTVTIY 503 567888777555555555555555*********99******987 PP >> tr|C3Z0T8|C3Z0T8_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_286065 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 4.8 0.0 0.9 94 22 38 .] 26 42 .. 10 42 .. 0.84 2 ? 3.1 0.0 3 3.1e+02 9 38 .] 273 302 .. 265 302 .. 0.70 Alignments for each domain: == domain 1 score: 4.8 bits; conditional E-value: 0.9 SSEEEEEETTSEEEEEE CS WD40 22 gawlasGsdDgtvriWd 38 g+++a+ + D+ vr++d tr|C3Z0T8|C3Z0T8_BRAFL 26 GNYIATTGADHVVRLYD 42 789997666******98 PP == domain 2 score: 3.1 bits; conditional E-value: 3 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 H +s + +a+s + + as++ D+ v+i d tr|C3Z0T8|C3Z0T8_BRAFL 273 NHkDSLNYIAVSVSLNKAASCG-DNCVKIHD 302 57444555555666688999**.*****976 PP >> tr|C3Z0U1|C3Z0U1_BRAFL Elongator complex protein 1 OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_286073 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 7.1 0.0 0.17 18 11 29 .. 111 130 .. 100 137 .. 0.67 Alignments for each domain: == domain 1 score: 7.1 bits; conditional E-value: 0.17 SSEEEEEEETTSSEEE.EEE CS WD40 11 ssvtslafspdgawla.sGs 29 s+ t++a+sp++++++ + + tr|C3Z0U1|C3Z0U1_BRAFL 111 SGLTCMAWSPNQDLVLlTTG 130 459***********643444 PP >> tr|C3YT94|C3YT94_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_205227 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 6.5 0.1 0.26 28 4 38 .] 86 124 .. 83 124 .. 0.74 2 ? 6.6 0.5 0.25 26 17 32 .. 172 194 .. 128 224 .. 0.75 Alignments for each domain: == domain 1 score: 6.5 bits; conditional E-value: 0.26 EEEEESS....SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH....ssvtslafspdgawlasGsdDgtvriWd 38 ++ l+G+ ++++s++++++g+ ++ s + v ++d tr|C3YT94|C3YT94_BRAFL 86 VTQLKGQgfmqKHISSVCVDKEGNIVVVDSHQHCVQVFD 124 5567777444445************99766688888876 PP == domain 2 score: 6.6 bits; conditional E-value: 0.25 E.......EETTSSEEEE.EETTS CS WD40 17 a.......fspdgawlas.GsdDg 32 f pdg+w+++ +s Dg tr|C3YT94|C3YT94_BRAFL 172 EhgkklqvFRPDGTWVSTiSS-DG 194 4555555699*****864434.33 PP >> tr|C3ZBA8|C3ZBA8_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_118767 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 8.8 0.0 0.049 5.1 8 24 .. 778 793 .. 771 804 .. 0.90 Alignments for each domain: == domain 1 score: 8.8 bits; conditional E-value: 0.049 ESSSSEEEEEEETTSSE CS WD40 8 tGHssvtslafspdgaw 24 tGH +vt+laf+pd+++ tr|C3ZBA8|C3ZBA8_BRAFL 778 TGH-GVTDLAFHPDNPF 793 69*.9*********997 PP >> tr|C3YUN5|C3YUN5_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_212359 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.5 0.0 0.028 3 13 38 .] 114 144 .. 104 144 .. 0.75 Alignments for each domain: == domain 1 score: 9.5 bits; conditional E-value: 0.028 EEEEEEETTSSEEE.EEET....TSEEEEEE CS WD40 13 vtslafspdgawla.sGsd....DgtvriWd 38 +sla++p+ + ++ +G d D +v +Wd tr|C3YUN5|C3YUN5_BRAFL 114 CNSLAWHPNESNMLaAGLDkyrsDSSVLVWD 144 689*********65166234556*******9 PP >> tr|C3ZG70|C3ZG70_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_69051 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 5.5 0.1 0.54 56 14 37 .. 238 261 .. 195 262 .. 0.68 Alignments for each domain: == domain 1 score: 5.5 bits; conditional E-value: 0.54 EEEEEETTSSEEEEE.ETTSEEEEE CS WD40 14 tslafspdgawlasG.sdDgtvriW 37 +++a pdg+ +++ s D+ ++i+ tr|C3ZG70|C3ZG70_BRAFL 238 YGVAMTPDGRVVVTDvS-DCAIKIY 261 45666777777766445.7777776 PP >> tr|C3Y7Z6|C3Y7Z6_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_84670 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 4.7 0.3 0.94 97 6 34 .. 665 699 .. 660 703 .. 0.76 2 ? 9.7 1.1 0.026 2.7 9 37 .. 754 787 .. 740 788 .. 0.82 Alignments for each domain: == domain 1 score: 4.7 bits; conditional E-value: 0.94 EE.ESS.SS....EEEEEEETTSSEEEEEETTSEE CS WD40 6 tl.tGH.ss....vtslafspdgawlasGsdDgtv 34 t+ +GH s+ +++a++ +g+ l++ s ++ v tr|C3Y7Z6|C3Y7Z6_BRAFL 665 TYgSGHrSPepwwPCCVAVDGEGNILVTDSNNHCV 699 553699888998659***********998855555 PP == domain 2 score: 9.7 bits; conditional E-value: 0.026 SS.SS..E..EEEEEETTSSEEEEEETTSEEEEE CS WD40 9 GH.ss..v..tslafspdgawlasGsdDgtvriW 37 H +s v +++a+sp g+ +++ +D+tv +W tr|C3Y7Z6|C3Y7Z6_BRAFL 754 CHiGSgmVspYGVAVSPGGDVVVTDFKDHTVSVW 787 576444765689***********989******** PP >> tr|C3ZA32|C3ZA32_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_121741 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.6 0.0 0.0062 0.65 10 32 .. 96 118 .. 85 119 .. 0.87 2 ? 8.3 1.8 0.072 7.5 9 38 .] 138 167 .. 129 167 .. 0.72 Alignments for each domain: == domain 1 score: 11.6 bits; conditional E-value: 0.0062 SSSEEEEEEETTSSEEEEEETTS CS WD40 10 HssvtslafspdgawlasGsdDg 32 H++++s+a +p+g++la+G++D+ tr|C3ZA32|C3ZA32_BRAFL 96 HCGIHSVAINPSGTLLATGGEDP 118 788*****************996 PP == domain 2 score: 8.3 bits; conditional E-value: 0.072 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 H +++ s+ + +d+ l++Gs+D++v +W+ tr|C3ZA32|C3ZA32_BRAFL 138 CHdDWIFSIVWLDDKF-LVTGSRDNSVAVWK 167 5755588886666644.679**********6 PP >> tr|C3Z6N6|C3Z6N6_BRAFL Eukaryotic translation initiation factor 3 subunit B OS=Branchiostoma floridae OX=7739 GN=BRA # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 4.7 0.5 0.97 1e+02 14 37 .. 541 570 .. 529 571 .. 0.76 Alignments for each domain: == domain 1 score: 4.7 bits; conditional E-value: 0.97 EEEEEETTSSEEEEE.ET.....TSEEEEE CS WD40 14 tslafspdgawlasG.sd.....DgtvriW 37 t++ ++p g++++++ s+ D+ +W tr|C3Z6N6|C3Z6N6_BRAFL 541 TDVEWDPTGRYVITAvSWwghkvDNAFWLW 570 8999********996565455568877777 PP Internal pipeline statistics summary: ------------------------------------- Query model(s): 1 (38 nodes) Target sequences: 28542 (13248087 residues searched) Passed MSV filter: 1286 (0.0450564); expected 570.8 (0.02) Passed bias filter: 1061 (0.0371733); expected 570.8 (0.02) Passed Vit filter: 376 (0.0131736); expected 28.5 (0.001) Passed Fwd filter: 277 (0.009705); expected 0.3 (1e-05) Initial search space (Z): 28542 [actual number of targets] Domain search space (domZ): 274 [number of targets reported over threshold] # CPU time: 0.34u 0.01s 00:00:00.35 Elapsed: 00:00:00.12 # Mc/sec: 4195.23 // [ok]