# hmmsearch :: search profile(s) against a sequence database # HMMER 3.1b2 (February 2015); http://hmmer.org/ # Copyright (C) 2015 Howard Hughes Medical Institute. # Freely distributed under the GNU General Public License (GPLv3). # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query HMM file: pfam_list/WD40.hmm.txt # target sequence database: proteomes/Mus_musculus.fasta # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: WD40 [M=38] Accession: PF00400.32 Description: WD domain, G-beta repeat Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1e-68 225.8 17.8 4.4e-09 37.1 0.1 8.2 8 tr|D3Z7A5|D3Z7A5_MOUSE Dynein assembly factor with WDR 3.6e-68 224.1 26.7 2.9e-09 37.7 0.1 9.1 8 sp|Q8VEJ4|NLE1_MOUSE Notchless protein homolog 1 OS=M 2e-66 218.6 87.6 5.7e-05 24.1 0.0 27.8 22 sp|Q5SQM0|EMAL6_MOUSE Echinoderm microtubule-associate 9.2e-66 216.5 22.1 6.4e-11 42.9 0.1 7.2 7 sp|Q8JZX3|POC1A_MOUSE POC1 centriolar protein homolog 1.4e-65 216.0 90.1 1.7e-05 25.8 0.2 27.3 21 sp|Q8BQM8|EMAL5_MOUSE Echinoderm microtubule-associate 1.1e-64 213.1 43.4 1.6e-08 35.4 0.1 13.6 13 sp|O88879|APAF_MOUSE Apoptotic protease-activating fa 4.4e-63 208.0 17.8 1.4e-08 35.6 0.3 7.7 7 sp|P63005|LIS1_MOUSE Platelet-activating factor acety 1.4e-62 206.4 19.9 6.3e-10 39.8 0.2 7.2 7 sp|P61965|WDR5_MOUSE WD repeat-containing protein 5 O 6.1e-60 198.1 15.5 8.1e-09 36.3 0.2 7.3 7 sp|Q8BHD1|POC1B_MOUSE POC1 centriolar protein homolog 6.8e-60 197.9 18.3 3.1e-09 37.6 0.1 7.2 7 sp|Q9D7H2|WDR5B_MOUSE WD repeat-containing protein 5B 9.3e-57 188.0 11.1 1.6e-10 41.7 0.1 6.8 6 sp|Q8C092|TAF5_MOUSE Transcription initiation factor 1.8e-56 187.1 17.7 8.3e-09 36.3 0.1 11.1 10 sp|Q8BHB4|WDR3_MOUSE WD repeat-containing protein 3 O 4.5e-53 176.3 28.1 2.3e-10 41.2 0.2 8.4 8 sp|Q9QXE7|TBL1X_MOUSE F-box-like/WD repeat-containing 5.8e-53 176.0 25.6 4.3e-10 40.3 0.2 8.4 8 sp|Q8BHJ5|TBL1R_MOUSE F-box-like/WD repeat-containing 9.5e-53 175.3 8.1 5e-10 40.1 0.1 7.3 7 sp|Q91WQ5|TAF5L_MOUSE TAF5-like RNA polymerase II p300 2.1e-52 174.2 29.9 1.8e-09 38.4 0.5 7.1 7 sp|Q9D994|WDR38_MOUSE WD repeat-containing protein 38 2.6e-52 173.9 36.8 3.2e-06 28.1 0.0 12.0 11 sp|Q8C4J7|TBL3_MOUSE Transducin beta-like protein 3 O 4e-51 170.2 6.7 1.2e-06 29.4 0.0 7.1 7 sp|Q6PE01|SNR40_MOUSE U5 small nuclear ribonucleoprote 8.9e-50 165.9 25.3 9.2e-09 36.1 0.2 7.1 7 sp|P68040|RACK1_MOUSE Receptor of activated protein C 1.5e-49 165.2 6.5 7.8e-12 45.8 0.2 6.6 6 sp|Q8BG40|KTNB1_MOUSE Katanin p80 WD40 repeat-containi 5.8e-49 163.3 32.7 3e-07 31.3 0.1 8.0 7 sp|Q8VBV4|FBXW7_MOUSE F-box/WD repeat-containing prote 1.2e-48 162.3 31.1 1.2e-10 42.0 0.7 7.4 7 sp|Q99KN2|CIAO1_MOUSE Probable cytosolic iron-sulfur p 9.8e-45 150.0 21.4 1.9e-08 35.1 0.0 7.1 7 sp|P62874|GBB1_MOUSE Guanine nucleotide-binding prote 1.5e-44 149.3 33.5 1.8e-06 28.8 0.1 17.6 14 sp|P97499|TEP1_MOUSE Telomerase protein component 1 O 5.6e-44 147.5 28.7 9e-06 26.6 0.1 10.9 10 sp|O88342|WDR1_MOUSE WD repeat-containing protein 1 O 7.8e-43 143.9 23.1 7.3e-07 30.1 0.1 7.1 7 sp|P29387|GBB4_MOUSE Guanine nucleotide-binding prote 9e-43 143.7 17.3 2.4e-09 38.0 0.0 7.1 7 sp|Q9ERF3|WDR61_MOUSE WD repeat-containing protein 61 1.3e-42 143.3 20.8 2e-06 28.7 0.0 7.2 7 sp|P62880|GBB2_MOUSE Guanine nucleotide-binding prote 1.8e-42 142.8 20.5 8e-08 33.1 0.1 7.1 7 sp|Q61011|GBB3_MOUSE Guanine nucleotide-binding prote 1.8e-41 139.6 24.2 1.3e-06 29.3 0.0 7.4 7 sp|Q9D0I6|WSDU1_MOUSE WD repeat, SAM and U-box domain- 2.2e-41 139.3 18.5 2.5e-09 37.9 0.6 7.4 7 sp|Q922V4|PLRG1_MOUSE Pleiotropic regulator 1 OS=Mus m 3.6e-41 138.7 18.9 2e-08 35.0 0.1 7.4 7 sp|Q9DAW6|PRP4_MOUSE U4/U6 small nuclear ribonucleopr 8.5e-41 137.5 8.9 5.2e-08 33.7 0.1 6.7 6 sp|Q3UKJ7|SMU1_MOUSE WD40 repeat-containing protein S 2.1e-40 136.2 18.2 1.9e-07 31.9 0.2 7.8 7 sp|Q8CIE6|COPA_MOUSE Coatomer subunit alpha OS=Mus mu 2.5e-40 136.0 17.1 7.6e-08 33.2 0.1 7.7 7 sp|O54929|WSB2_MOUSE WD repeat and SOCS box-containin 2.6e-40 135.9 7.6 1.5e-08 35.4 0.1 8.1 7 sp|O55029|COPB2_MOUSE Coatomer subunit beta' OS=Mus mu 5.9e-40 134.8 19.2 8.1e-07 30.0 0.2 7.8 7 sp|Q5SRY7|FBW1B_MOUSE F-box/WD repeat-containing prote 1.4e-39 133.6 18.6 2.9e-06 28.2 0.2 7.6 7 sp|Q3ULA2|FBW1A_MOUSE F-box/WD repeat-containing prote 6.1e-39 131.6 20.5 2.8e-05 25.1 0.1 8.3 8 tr|D3Z757|D3Z757_MOUSE WD repeat domain 86 OS=Mus muscu 1.5e-37 127.2 8.1 1.8e-10 41.5 0.2 7.5 7 sp|P97452|BOP1_MOUSE Ribosome biogenesis protein BOP1 2.9e-37 126.3 23.9 0.0094 17.1 0.0 12.8 11 sp|Q6NS57|MABP1_MOUSE Mitogen-activated protein kinase 4.4e-37 125.7 21.7 1.4e-06 29.2 0.2 7.3 7 sp|P62881|GNB5_MOUSE Guanine nucleotide-binding prote 4.9e-37 125.6 5.5 7.7e-08 33.2 0.0 6.6 6 sp|O55106|STRN_MOUSE Striatin OS=Mus musculus OX=1009 1.5e-36 124.1 12.1 6.4e-06 27.1 0.0 7.9 7 sp|P27612|PLAP_MOUSE Phospholipase A-2-activating pro 8e-36 121.8 11.9 4e-06 27.8 0.0 7.4 7 sp|Q9DC48|PRP17_MOUSE Pre-mRNA-processing factor 17 OS 2.4e-35 120.2 11.4 4.3e-08 34.0 0.1 7.0 6 sp|Q9ERG2|STRN3_MOUSE Striatin-3 OS=Mus musculus OX=10 2.5e-35 120.2 0.2 8e-10 39.5 0.0 6.3 6 sp|Q9Z1Z2|STRAP_MOUSE Serine-threonine kinase receptor 3.3e-35 119.8 26.1 1.8e-06 28.9 0.0 6.8 6 sp|Q8K450|SPG16_MOUSE Sperm-associated antigen 16 prot 3.9e-35 119.6 14.8 2.6e-05 25.2 0.5 8.7 8 sp|Q921C3|BRWD1_MOUSE Bromodomain and WD repeat-contai 4.4e-35 119.4 10.6 5.2e-08 33.7 0.0 7.2 6 sp|Q99KP6|PRP19_MOUSE Pre-mRNA-processing factor 19 OS 6.7e-35 118.8 20.9 6.3e-06 27.1 0.4 8.7 7 sp|A2AHJ4|BRWD3_MOUSE Bromodomain and WD repeat-contai 7.2e-35 118.7 16.3 7.4e-10 39.6 0.4 6.9 6 sp|P58404|STRN4_MOUSE Striatin-4 OS=Mus musculus OX=10 7.7e-35 118.6 47.5 0.00024 22.1 0.2 19.5 17 sp|Q6ZPG2|WDR90_MOUSE WD repeat-containing protein 90 9.6e-35 118.3 31.5 6.7e-05 23.9 1.4 12.3 10 sp|Q91WG4|ELP2_MOUSE Elongator complex protein 2 OS=M 1e-34 118.3 9.6 7.4e-05 23.7 0.0 8.2 8 sp|Q9DCJ1|LST8_MOUSE Target of rapamycin complex subu 4.2e-34 116.3 31.8 2.2e-05 25.4 0.6 7.3 7 sp|Q9JJA4|WDR12_MOUSE Ribosome biogenesis protein WDR1 8.3e-34 115.4 1.5 2.6e-06 28.3 0.0 6.4 6 sp|Q99LC2|CSTF1_MOUSE Cleavage stimulation factor subu 1.2e-33 114.9 16.3 1.6e-07 32.2 0.1 7.3 6 sp|O54927|WSB1_MOUSE WD repeat and SOCS box-containin 1.2e-33 114.8 13.2 4.1e-05 24.6 0.1 8.6 8 sp|Q8VDD9|PHIP_MOUSE PH-interacting protein OS=Mus mu 5.1e-33 112.9 11.8 5.1e-06 27.4 0.3 7.1 7 sp|Q9DAJ4|WDR83_MOUSE WD repeat domain-containing prot 1.2e-32 111.6 9.8 1.4e-06 29.2 0.0 7.4 7 sp|Q8C0J2|A16L1_MOUSE Autophagy-related protein 16-1 O 1.6e-32 111.3 25.4 0.00049 21.1 0.0 12.7 12 sp|Q3U3T8|WDR62_MOUSE WD repeat-containing protein 62 3.1e-32 110.4 1.1 1.1e-06 29.5 0.1 7.7 6 sp|Q9D2V7|CORO7_MOUSE Coronin-7 OS=Mus musculus OX=100 3.2e-32 110.4 23.8 1.9e-08 35.1 0.8 7.8 7 sp|Q922B6|TRAF7_MOUSE E3 ubiquitin-protein ligase TRAF 7.2e-32 109.2 14.5 2.3e-06 28.5 0.0 7.4 7 sp|Q8K4P0|WDR33_MOUSE pre-mRNA 3' end processing prote 1.6e-31 108.1 16.5 0.0069 17.5 0.2 11.4 10 sp|Q5F201|CFA52_MOUSE Cilia- and flagella-associated p 1.5e-30 105.1 11.9 0.00012 23.1 0.1 8.1 7 tr|J3QN89|J3QN89_MOUSE Angio-associated migratory prote 1.6e-30 105.0 33.3 1.2e-06 29.5 0.2 10.2 7 tr|E9Q271|E9Q271_MOUSE WD repeat domain 17 OS=Mus muscu 4.8e-30 103.5 30.5 3.3e-08 34.3 0.1 11.8 10 sp|Q8BU03|PWP2_MOUSE Periodic tryptophan protein 2 ho 9.9e-30 102.5 14.1 5e-06 27.4 0.2 7.9 7 tr|D3Z7A8|D3Z7A8_MOUSE WD40 repeat domain 95 OS=Mus mus 2.3e-29 101.3 21.1 0.00025 22.1 0.1 9.7 8 sp|Q3UMY5|EMAL4_MOUSE Echinoderm microtubule-associate 2.5e-29 101.2 5.4 7.1e-07 30.1 0.1 6.3 5 sp|Q8C7V3|UTP15_MOUSE U3 small nucleolar RNA-associate 4.9e-29 100.3 9.5 3.4e-05 24.8 0.1 6.8 6 sp|Q8BH57|WDR48_MOUSE WD repeat-containing protein 48 1.1e-28 99.2 32.6 3.1e-08 34.4 4.0 8.6 6 sp|Q61666|HIRA_MOUSE Protein HIRA OS=Mus musculus OX= 3.2e-28 97.7 11.0 1.3e-05 26.2 0.4 7.7 7 sp|Q9QXL2|KI21A_MOUSE Kinesin-like protein KIF21A OS=M 3.9e-28 97.4 24.6 6.6e-07 30.2 0.4 6.8 6 sp|Q8CBE3|WDR37_MOUSE WD repeat-containing protein 37 4.8e-28 97.1 15.1 3.4e-05 24.8 0.0 7.8 6 sp|Q8CGF6|WDR47_MOUSE WD repeat-containing protein 47 5.6e-28 96.9 14.9 7.3e-05 23.8 0.4 7.2 7 sp|Q91WM3|U3IP2_MOUSE U3 small nucleolar RNA-interacti 6.8e-28 96.7 8.7 0.0019 19.3 0.2 7.8 7 sp|Q9QXL1|KI21B_MOUSE Kinesin-like protein KIF21B OS=M 1.3e-27 95.7 21.2 1.4e-06 29.2 0.5 7.2 7 sp|Q9JJ66|CDC20_MOUSE Cell division cycle protein 20 h 1.7e-27 95.4 10.8 1e-05 26.5 0.0 6.2 5 sp|Q8C6G8|WDR26_MOUSE WD repeat-containing protein 26 2.2e-27 95.0 7.3 6.1e-06 27.2 0.0 6.5 6 sp|Q9R1K5|FZR1_MOUSE Fizzy-related protein homolog OS 6.3e-27 93.6 38.5 0.0038 18.3 0.5 11.4 10 sp|Q7TNG5|EMAL2_MOUSE Echinoderm microtubule-associate 1.4e-26 92.5 14.7 4.1e-07 30.9 0.0 5.6 5 sp|Q60972|RBBP4_MOUSE Histone-binding protein RBBP4 OS 3.9e-26 91.1 14.9 2.2e-06 28.6 0.0 5.6 5 sp|Q60973|RBBP7_MOUSE Histone-binding protein RBBP7 OS 4.6e-26 90.9 33.4 0.00014 22.9 0.2 10.1 8 sp|Q8VC03|EMAL3_MOUSE Echinoderm microtubule-associate 4.8e-26 90.8 17.2 1.2e-05 26.3 0.1 6.4 6 sp|P97865|PEX7_MOUSE Peroxisomal targeting signal 2 r 5e-26 90.7 17.0 2.5e-06 28.4 0.0 7.4 7 sp|Q6KAU8|A16L2_MOUSE Autophagy-related protein 16-2 O 6e-26 90.5 1.2 5.7e-06 27.3 1.6 6.2 5 sp|Q9QZD9|EIF3I_MOUSE Eukaryotic translation initiatio 8.2e-26 90.1 14.4 1.9e-05 25.6 0.3 7.0 6 sp|Q8VE80|THOC3_MOUSE THO complex subunit 3 OS=Mus mus 1.2e-25 89.6 41.4 0.00022 22.3 0.7 10.9 9 sp|Q05BC3|EMAL1_MOUSE Echinoderm microtubule-associate 2.8e-25 88.4 14.0 4.4e-07 30.8 0.9 6.3 5 sp|Q9D0N7|CAF1B_MOUSE Chromatin assembly factor 1 subu 4.6e-25 87.7 8.1 0.00029 21.9 0.1 7.3 6 sp|Q6NVE8|WDR44_MOUSE WD repeat-containing protein 44 5e-25 87.6 1.7 1.9e-05 25.6 0.0 6.2 6 sp|Q8BFQ4|WDR82_MOUSE WD repeat-containing protein 82 7.3e-25 87.1 36.1 6.2e-05 24.0 0.2 13.2 9 sp|Q8BX17|GEMI5_MOUSE Gem-associated protein 5 OS=Mus 1.7e-24 85.9 9.9 3.1e-06 28.1 0.1 6.8 6 sp|Q9JHB4|WDR31_MOUSE WD repeat-containing protein 31 3.2e-24 85.0 13.0 5.2e-05 24.2 0.9 6.2 5 sp|Q3TLR7|DTL_MOUSE Denticleless protein homolog OS= 5.9e-24 84.2 3.7 1.7e-06 28.9 0.5 6.7 6 sp|Q8N7N5|DCAF8_MOUSE DDB1- and CUL4-associated factor 1.3e-23 83.1 9.0 2.4e-08 34.8 0.2 5.6 4 sp|Q9R099|TBL2_MOUSE Transducin beta-like protein 2 O 3.3e-23 81.8 11.8 5.7e-07 30.4 0.3 6.0 5 sp|Q8CFD5|ERCC8_MOUSE DNA excision repair protein ERCC 3.7e-23 81.7 3.6 0.00077 20.5 0.0 9.0 7 sp|E9Q5M6|CFA44_MOUSE Cilia- and flagella-associated p 7.1e-23 80.8 16.0 6.4e-05 24.0 0.5 7.4 7 sp|Q91VU6|DCA11_MOUSE DDB1- and CUL4-associated factor 7.4e-23 80.7 10.1 0.00047 21.2 0.1 5.8 5 sp|Q6PAC3|DCA13_MOUSE DDB1- and CUL4-associated factor 2.1e-22 79.3 6.0 2.6e-06 28.3 0.1 6.5 4 sp|Q80ZK9|WDTC1_MOUSE WD and tetratricopeptide repeats 2.8e-22 78.9 2.6 3.8e-05 24.7 0.0 6.2 6 sp|Q9WVA3|BUB3_MOUSE Mitotic checkpoint protein BUB3 1.6e-21 76.5 15.2 8.5e-06 26.7 0.3 5.5 5 sp|Q9DCE5|PK1IP_MOUSE p21-activated protein kinase-int 3.4e-21 75.4 10.6 5.3e-07 30.5 1.1 6.5 6 sp|Q8BUB4|WDFY2_MOUSE WD repeat and FYVE domain-contai 4e-21 75.2 0.7 0.00097 20.2 0.1 7.2 7 sp|Q9CX97|WDR55_MOUSE WD repeat-containing protein 55 6.4e-21 74.6 12.3 0.001 20.1 0.0 8.2 6 tr|A0A0N4SUK7|A0A0N4SUK7_MOUSE WD repeat domain 49 OS=Mus muscu 6.8e-21 74.5 25.7 0.00071 20.6 0.1 6.9 6 sp|Q9D1M0|SEC13_MOUSE Protein SEC13 homolog OS=Mus mus 7.7e-21 74.3 10.5 4.1e-05 24.6 0.6 6.0 5 sp|E9Q4P1|WDFY1_MOUSE WD repeat and FYVE domain-contai 2e-20 73.0 0.8 0.00018 22.6 0.1 6.2 5 sp|Q5SUS0|FBW10_MOUSE F-box/WD repeat-containing prote 3.5e-20 72.2 11.1 2.8e-08 34.6 0.2 8.9 7 tr|Q3TAQ9|Q3TAQ9_MOUSE WD repeat domain 36 OS=Mus muscu 5.7e-20 71.6 7.5 1.7e-06 28.9 0.1 6.0 5 sp|Q8K3E5|AHI1_MOUSE Jouberin OS=Mus musculus OX=1009 6.1e-20 71.5 11.9 0.053 14.7 0.0 7.6 6 sp|Q9R1A8|COP1_MOUSE E3 ubiquitin-protein ligase COP1 6.9e-20 71.3 6.6 0.00061 20.8 0.5 7.1 6 sp|O88466|ZN106_MOUSE Zinc finger protein 106 OS=Mus m 7e-20 71.3 18.2 0.01 17.0 0.3 7.4 7 sp|Q9WVB2|TLE2_MOUSE Transducin-like enhancer protein 7.4e-20 71.2 4.1 5.5e-06 27.3 0.7 6.6 5 tr|A2AHY8|A2AHY8_MOUSE Pet2 protein OS=Mus musculus OX= 1.1e-19 70.7 7.1 1.3e-05 26.1 0.1 4.6 4 sp|Q810D6|GRWD1_MOUSE Glutamate-rich WD repeat-contain 1.6e-19 70.2 11.1 0.00028 21.9 0.0 9.5 5 sp|A6H603|NWD1_MOUSE NACHT domain- and WD repeat-cont 1.7e-19 70.1 11.7 5.5e-05 24.1 0.1 6.8 6 sp|Q8VC51|TCAB1_MOUSE Telomerase Cajal body protein 1 2.8e-19 69.4 17.6 4.6e-06 27.6 0.4 8.3 6 sp|Q3U821|WDR75_MOUSE WD repeat-containing protein 75 4.1e-19 68.9 11.3 0.0024 19.0 0.2 7.4 7 sp|Q3TWF6|WDR70_MOUSE WD repeat-containing protein 70 4.2e-19 68.8 12.1 6.3e-07 30.3 1.0 7.8 6 sp|Q8C5V5|WDR27_MOUSE WD repeat-containing protein 27 6e-19 68.3 9.6 0.001 20.1 0.1 5.9 5 sp|Q80T85|DCAF5_MOUSE DDB1- and CUL4-associated factor 8.1e-19 67.9 5.6 2.5e-06 28.4 0.0 6.4 6 sp|Q9DB94|WDR53_MOUSE WD repeat-containing protein 53 8.6e-19 67.9 9.7 2.6e-06 28.4 0.0 8.0 6 sp|Q6NWV3|IF122_MOUSE Intraflagellar transport protein 1e-18 67.6 8.5 3.6e-08 34.2 0.1 6.0 4 sp|P59328|WDHD1_MOUSE WD repeat and HMG-box DNA-bindin 1.1e-18 67.5 2.6 0.00017 22.6 0.0 6.2 6 sp|Q9EQ15|GNB1L_MOUSE Guanine nucleotide-binding prote 1.3e-18 67.3 20.1 0.00025 22.1 0.2 7.4 5 sp|Q920I9|WDR7_MOUSE WD repeat-containing protein 7 O 1.8e-18 66.8 5.2 6e-05 24.0 0.2 5.1 4 sp|O89053|COR1A_MOUSE Coronin-1A OS=Mus musculus OX=10 2.2e-18 66.6 6.8 0.016 16.4 0.0 9.1 7 sp|Q9D565|WDR64_MOUSE WD repeat-containing protein 64 1.2e-17 64.2 9.6 0.014 16.6 0.1 7.5 7 sp|Q9DC22|DCAF6_MOUSE DDB1- and CUL4-associated factor 1.2e-17 64.2 11.3 1.7e-08 35.3 0.4 5.6 5 sp|Q4VBE8|WDR18_MOUSE WD repeat-containing protein 18 1.9e-17 63.6 9.2 1.9e-05 25.6 0.0 6.1 5 sp|Q8K0G5|EIPR1_MOUSE EARP and GARP complex-interactin 2e-17 63.5 18.1 0.02 16.1 0.8 7.5 7 sp|Q62441|TLE4_MOUSE Transducin-like enhancer protein 2.1e-17 63.4 6.9 6.8e-05 23.9 0.3 5.1 4 sp|Q920M5|CORO6_MOUSE Coronin-6 OS=Mus musculus OX=100 2.4e-17 63.2 22.8 0.0036 18.4 2.4 7.7 7 sp|O35242|FAN_MOUSE Protein FAN OS=Mus musculus OX=1 4.1e-17 62.5 25.2 0.00014 22.9 0.1 11.3 7 sp|Q99ME2|WDR6_MOUSE WD repeat-containing protein 6 O 8.3e-17 61.6 8.1 4.6e-05 24.4 0.1 8.1 5 sp|E9Q743|CF251_MOUSE Cilia- and flagella-associated p 1e-16 61.3 13.5 8.9e-05 23.5 0.1 6.2 5 sp|E9Q349|WDR25_MOUSE WD repeat-containing protein 25 1.4e-16 60.9 3.1 0.077 14.2 0.1 7.0 6 sp|Q5U4F6|WDR34_MOUSE WD repeat-containing protein 34 1.7e-16 60.6 12.4 4.6e-06 27.6 0.2 6.4 5 sp|Q8CFJ9|WDR24_MOUSE GATOR complex protein WDR24 OS=M 1.8e-16 60.5 19.0 0.021 16.0 1.3 7.5 7 sp|Q08122|TLE3_MOUSE Transducin-like enhancer protein 1.9e-16 60.4 18.2 0.02 16.1 0.8 7.5 7 sp|Q62440|TLE1_MOUSE Transducin-like enhancer protein 6.6e-16 58.7 2.2 4.4e-05 24.5 0.1 4.9 3 sp|Q8C0P5|COR2A_MOUSE Coronin-2A OS=Mus musculus OX=10 7.2e-16 58.6 10.9 0.0001 23.3 0.1 5.6 5 sp|Q60584|FBXW2_MOUSE F-box/WD repeat-containing prote 1.1e-15 58.0 6.6 0.00036 21.6 0.1 6.5 5 sp|Q99J79|DDB2_MOUSE DNA damage-binding protein 2 OS= 1.3e-15 57.8 3.1 0.014 16.6 0.0 6.0 4 sp|Q3UDP0|WDR41_MOUSE WD repeat-containing protein 41 1.4e-15 57.7 16.5 0.1 13.8 0.5 8.1 7 sp|P33215|NEDD1_MOUSE Protein NEDD1 OS=Mus musculus OX 6.1e-15 55.7 8.5 4.3e-05 24.5 0.6 4.5 3 sp|Q9WUM4|COR1C_MOUSE Coronin-1C OS=Mus musculus OX=10 8.3e-15 55.2 31.7 0.00019 22.4 1.9 6.7 5 sp|Q8R2U0|SEH1_MOUSE Nucleoporin SEH1 OS=Mus musculus 1.7e-14 54.3 2.0 2.6e-06 28.4 0.3 5.0 3 sp|Q9QXW2|FBXW5_MOUSE F-box/WD repeat-containing prote 1.9e-14 54.1 23.2 0.013 16.7 0.0 11.6 7 sp|Q6PNC0|DMXL1_MOUSE DmX-like protein 1 OS=Mus muscul 2.3e-14 53.8 21.6 0.24 12.7 0.1 10.2 7 sp|Q8R2N2|UTP4_MOUSE U3 small nucleolar RNA-associate 3.5e-14 53.2 5.8 0.013 16.7 0.0 8.8 6 sp|Q9D180|CFA57_MOUSE Cilia- and flagella-associated p 5.8e-14 52.6 11.1 0.00018 22.5 0.0 5.7 4 tr|A0A140LHH9|A0A140LHH9_MOUSE Predicted gene, 35339 OS=Mus mus 6.8e-14 52.4 3.4 0.00048 21.2 0.1 4.7 3 sp|Q6ZQA0|NBEL2_MOUSE Neurobeachin-like protein 2 OS=M 1.4e-13 51.4 34.8 0.0096 17.1 0.0 11.5 8 sp|Q8BPN8|DMXL2_MOUSE DmX-like protein 2 OS=Mus muscul 1.4e-13 51.3 0.6 0.0049 18.0 0.1 4.4 3 sp|Q8BH44|COR2B_MOUSE Coronin-2B OS=Mus musculus OX=10 1.5e-13 51.3 8.6 9.9e-05 23.3 0.2 4.8 3 sp|Q9WUM3|COR1B_MOUSE Coronin-1B OS=Mus musculus OX=10 1.7e-13 51.1 10.5 0.00082 20.4 0.8 5.8 5 sp|A2AKB9|DCA10_MOUSE DDB1- and CUL4-associated factor 1.9e-13 50.9 2.6 7.4e-05 23.7 0.0 5.5 4 sp|Q5U4D9|THOC6_MOUSE THO complex subunit 6 homolog OS 2.3e-13 50.7 3.3 2.8e-05 25.1 0.0 4.7 4 sp|Q9CWU9|NUP37_MOUSE Nucleoporin Nup37 OS=Mus musculu 3.5e-13 50.1 16.4 0.00023 22.2 0.6 6.8 4 sp|Q6ZQL4|WDR43_MOUSE WD repeat-containing protein 43 4.3e-13 49.8 22.3 0.00012 23.1 0.4 6.4 4 sp|Q8C0M0|WDR59_MOUSE GATOR complex protein WDR59 OS=M 1.4e-12 48.2 2.5 0.00067 20.7 0.2 4.7 3 sp|Q08274|DMWD_MOUSE Dystrophia myotonica WD repeat-c 1.7e-12 47.9 8.9 0.0013 19.8 0.0 8.1 5 sp|Q9JM98|WRP73_MOUSE WD repeat-containing protein WRA 3.2e-12 47.1 19.6 4.2e-05 24.5 0.1 6.8 5 sp|Q9WV32|ARC1B_MOUSE Actin-related protein 2/3 comple 3.4e-12 47.0 16.7 0.00062 20.8 0.2 5.7 5 sp|Q8C570|RAE1L_MOUSE mRNA export factor OS=Mus muscul 3.6e-12 46.9 3.9 0.00095 20.2 0.0 5.7 5 sp|Q8BGF3|WDR92_MOUSE WD repeat-containing protein 92 3.6e-12 46.9 17.9 0.038 15.2 2.7 6.0 5 tr|F8VPX2|F8VPX2_MOUSE F-box and WD-40 domain protein 9 7.5e-12 45.9 16.3 0.00016 22.7 0.5 6.1 4 sp|Q9R0Q6|ARC1A_MOUSE Actin-related protein 2/3 comple 9.1e-12 45.6 2.4 0.028 15.6 0.0 4.5 3 sp|Q8CEC6|PPWD1_MOUSE Peptidylprolyl isomerase domain 9.6e-12 45.5 3.6 0.00029 21.9 0.2 5.2 3 tr|Q3UWE6|Q3UWE6_MOUSE MCG14935, isoform CRA_a OS=Mus m 1e-11 45.5 14.2 0.0001 23.3 0.1 6.1 3 sp|Q8VD65|PI3R4_MOUSE Phosphoinositide 3-kinase regula 1.2e-11 45.2 17.9 3.3e-05 24.8 0.1 6.0 5 sp|Q99J09|MEP50_MOUSE Methylosome protein 50 OS=Mus mu 1.3e-11 45.2 8.9 0.46 11.7 0.0 7.1 6 sp|Q8K057|IFT80_MOUSE Intraflagellar transport protein 1.4e-11 45.1 6.5 0.0012 19.9 0.3 5.7 4 sp|Q91V09|WDR13_MOUSE WD repeat-containing protein 13 1.7e-11 44.8 17.4 0.0048 18.0 0.1 6.3 4 sp|Q9JMJ2|FBXW4_MOUSE F-box/WD repeat-containing prote 2.4e-11 44.3 8.8 0.005 18.0 0.0 6.5 4 sp|Q7TMQ7|WDR91_MOUSE WD repeat-containing protein 91 2.4e-11 44.3 12.3 0.015 16.4 0.1 6.3 4 sp|Q99LL5|PWP1_MOUSE Periodic tryptophan protein 1 ho 3e-11 44.0 7.2 0.56 11.5 0.0 7.7 5 sp|D3YYM4|WDR72_MOUSE WD repeat-containing protein 72 3.3e-11 43.8 3.8 4.4e-05 24.5 0.0 6.4 4 sp|Q5ND34|WDR81_MOUSE WD repeat-containing protein 81 3.7e-11 43.7 15.0 0.0031 18.6 0.0 5.9 4 sp|Q9D0R9|WDR89_MOUSE WD repeat-containing protein 89 6.4e-11 42.9 0.4 0.00032 21.7 0.0 4.4 3 sp|Q9WUQ2|PREB_MOUSE Prolactin regulatory element-bin 9.2e-11 42.4 6.6 0.0003 21.8 0.1 5.3 4 sp|Q9D5R2|WDR20_MOUSE WD repeat-containing protein 20 1e-10 42.3 11.4 1.5e-05 26.0 0.0 5.1 3 sp|Q921E6|EED_MOUSE Polycomb protein EED OS=Mus musc 1.3e-10 42.0 1.8 0.13 13.5 0.0 5.8 5 sp|Q8VCG3|WDR74_MOUSE WD repeat-containing protein 74 1.4e-10 41.9 17.4 0.00047 21.2 2.0 6.2 5 sp|Q8BX09|RBBP5_MOUSE Retinoblastoma-binding protein 5 2.1e-10 41.3 1.8 0.056 14.6 0.1 5.2 3 sp|E9PYY5|WDR78_MOUSE WD repeat-containing protein 78 2.2e-10 41.3 3.3 1.4 10.2 0.1 6.8 5 sp|Q6ZWR4|2ABB_MOUSE Serine/threonine-protein phospha 2.6e-10 41.0 1.8 0.15 13.3 0.0 5.8 5 tr|A0A1B0GS18|A0A1B0GS18_MOUSE Predicted gene 45736 OS=Mus musc 3e-10 40.8 21.7 0.00023 22.2 0.2 6.5 5 tr|D3Z3I0|D3Z3I0_MOUSE Cell division cycle 20B OS=Mus m 6.7e-10 39.7 3.6 3.7 8.9 0.1 6.7 6 sp|Q6P1F6|2ABA_MOUSE Serine/threonine-protein phospha 6.9e-10 39.7 4.2 0.46 11.7 0.0 7.0 6 sp|Q9WVB3|TLE6_MOUSE Transducin-like enhancer protein 6.9e-10 39.7 19.8 0.00066 20.7 0.2 6.4 5 sp|Q6GQT6|SCAP_MOUSE Sterol regulatory element-bindin 9.6e-10 39.2 25.2 0.0021 19.1 0.1 8.5 5 tr|E9PZP8|E9PZP8_MOUSE HECT and RLD domain-containing E 1.1e-09 39.1 10.1 0.29 12.4 0.1 7.1 4 sp|Q5DQR4|STB5L_MOUSE Syntaxin-binding protein 5-like 2.3e-09 38.0 2.4 0.034 15.3 0.1 5.0 4 sp|Q8BL74|TF3C2_MOUSE General transcription factor 3C 3.2e-09 37.6 0.4 0.011 16.9 0.0 4.2 3 tr|A0A140LJ36|A0A140LJ36_MOUSE PRA1 family protein OS=Mus muscu 5e-09 37.0 2.1 0.014 16.5 0.0 5.2 3 sp|Q91VM3|WIPI4_MOUSE WD repeat domain phosphoinositid 8.8e-09 36.2 10.7 0.066 14.4 0.2 7.5 5 sp|Q8K4Q0|RPTOR_MOUSE Regulatory-associated protein of 8.9e-09 36.2 8.8 1.5 10.1 0.4 6.6 5 tr|A0A1W2P7S4|A0A1W2P7S4_MOUSE Predicted gene, 21964 OS=Mus mus 1.5e-08 35.5 4.6 0.97 10.7 0.2 6.3 5 sp|Q9ESE1|LRBA_MOUSE Lipopolysaccharide-responsive an 1.8e-08 35.2 8.8 0.026 15.7 0.3 6.5 4 sp|Q8K400|STXB5_MOUSE Syntaxin-binding protein 5 OS=Mu 3.5e-08 34.3 4.0 0.0033 18.5 0.9 5.0 2 tr|E9PYP2|E9PYP2_MOUSE Neurobeachin-like 1 OS=Mus muscu 5.1e-08 33.8 10.6 0.0031 18.6 0.0 5.4 2 tr|E9Q2M9|E9Q2M9_MOUSE WD repeat and FYVE domain-contai 5.5e-08 33.6 5.7 7 8.0 0.1 6.3 5 sp|Q925E7|2ABD_MOUSE Serine/threonine-protein phospha 6.4e-08 33.4 5.3 2.1 9.6 0.1 6.0 4 sp|Q8BG02|2ABG_MOUSE Serine/threonine-protein phospha 7e-08 33.3 1.5 0.034 15.3 0.1 4.2 3 tr|Q3UU56|Q3UU56_MOUSE Predicted gene 29609 OS=Mus musc 7.3e-08 33.3 13.6 0.0054 17.8 0.7 6.4 5 sp|Q8C0M8|DNAI1_MOUSE Dynein intermediate chain 1, axo 9.5e-08 32.9 0.2 0.32 12.3 0.0 6.2 4 sp|Q6VH22|IF172_MOUSE Intraflagellar transport protein 1.4e-07 32.4 0.0 3.2 9.1 0.0 6.1 4 sp|Q5SSI6|UTP18_MOUSE U3 small nucleolar RNA-associate 3e-07 31.3 10.0 1.7e-05 25.7 0.3 5.5 3 sp|P58742|AAAS_MOUSE Aladin OS=Mus musculus OX=10090 3.2e-07 31.2 1.4 0.0045 18.1 0.8 4.3 3 sp|Q8CBW4|DC121_MOUSE DDB1- and CUL4-associated factor 3.7e-07 31.0 10.3 0.021 16.0 0.0 6.1 4 sp|P97412|LYST_MOUSE Lysosomal-trafficking regulator 4.4e-07 30.8 10.3 0.14 13.4 0.3 6.6 4 sp|O88485|DC1I1_MOUSE Cytoplasmic dynein 1 intermediat 8.5e-07 29.9 11.1 0.17 13.1 0.6 6.9 6 sp|O88487|DC1I2_MOUSE Cytoplasmic dynein 1 intermediat 1.3e-06 29.3 0.6 0.063 14.5 0.1 3.9 3 sp|Q8C761|WDR60_MOUSE WD repeat-containing protein 60 1.3e-06 29.3 7.0 1 10.7 0.0 5.5 4 sp|A6PWY4|WDR76_MOUSE WD repeat-containing protein 76 1.8e-06 28.8 0.3 0.025 15.7 0.5 4.2 3 sp|Q8BGW4|DC122_MOUSE DDB1- and CUL4-associated factor 2.4e-06 28.4 2.3 0.37 12.1 0.3 5.3 3 sp|Q6NXY1|TBC31_MOUSE TBC1 domain family member 31 OS= 4e-06 27.7 3.9 0.0071 17.5 0.2 5.0 3 sp|Q8BUI3|LRWD1_MOUSE Leucine-rich repeat and WD repea 4.6e-06 27.6 13.1 0.035 15.3 0.2 5.8 4 sp|Q6VNB8|WDFY3_MOUSE WD repeat and FYVE domain-contai 5.1e-06 27.4 9.2 0.043 15.0 1.0 4.6 3 sp|P61963|DCAF7_MOUSE DDB1- and CUL4-associated factor 5.8e-06 27.2 11.1 1.4 10.2 0.3 7.0 5 sp|Q9EPN1|NBEA_MOUSE Neurobeachin OS=Mus musculus OX= 6e-06 27.2 2.1 0.11 13.7 0.0 3.8 2 sp|Q9EP82|WDR4_MOUSE tRNA (guanine-N(7)-)-methyltrans 6.8e-06 27.0 3.0 31 5.9 0.1 5.6 4 sp|Q8BIA4|FBXW8_MOUSE F-box/WD repeat-containing prote 1.3e-05 26.1 3.2 0.021 16.0 0.0 4.8 3 sp|Q9Z0H1|WDR46_MOUSE WD repeat-containing protein 46 1.4e-05 26.0 1.9 0.15 13.3 0.0 4.9 2 sp|Q80Y17|L2GL1_MOUSE Lethal(2) giant larvae protein h 1.4e-05 26.0 0.1 0.19 13.0 0.0 3.9 2 tr|A0A1Y7VNZ0|A0A1Y7VNZ0_MOUSE DDB1 and CUL4-associated factor 2.1e-05 25.5 10.3 0.0003 21.8 1.0 4.8 3 sp|A2AH22|AMRA1_MOUSE Activating molecule in BECN1-reg 2.3e-05 25.3 11.9 0.034 15.3 0.1 5.1 3 sp|Q9CYU6|DPH7_MOUSE Diphthine methyltransferase OS=M 2.5e-05 25.2 14.3 0.0036 18.4 0.1 5.9 3 sp|P59235|NUP43_MOUSE Nucleoporin Nup43 OS=Mus musculu 3e-05 25.0 0.1 5.5 8.3 0.0 4.2 3 sp|Q80W47|WIPI2_MOUSE WD repeat domain phosphoinositid 3.7e-05 24.7 3.6 0.019 16.1 0.0 4.7 2 sp|Q3TJ91|L2GL2_MOUSE Lethal(2) giant larvae protein h 3.7e-05 24.7 2.1 0.00015 22.8 0.8 2.8 1 sp|Q6PGF3|MED16_MOUSE Mediator of RNA polymerase II tr 6.1e-05 24.0 0.5 0.0071 17.5 0.1 3.3 2 sp|Q3UJB9|EDC4_MOUSE Enhancer of mRNA-decapping prote 6.4e-05 23.9 2.7 1.8 9.9 0.0 5.6 3 sp|Q8BND3|WDR35_MOUSE WD repeat-containing protein 35 9.5e-05 23.4 0.4 10 7.5 0.0 4.2 3 sp|Q8R3E3|WIPI1_MOUSE WD repeat domain phosphoinositid 0.00016 22.7 6.6 1.8 9.8 0.2 6.7 4 sp|Q8K1X1|WDR11_MOUSE WD repeat-containing protein 11 0.00017 22.6 12.7 0.062 14.5 0.1 6.0 2 tr|B2RY71|B2RY71_MOUSE WD repeat domain 63 OS=Mus muscu 0.00021 22.3 2.6 0.64 11.3 0.3 4.1 2 sp|Q9CWR1|WDR73_MOUSE WD repeat-containing protein 73 0.00035 21.6 2.4 1.5 10.1 0.8 4.4 3 sp|Q8BGZ3|DCA12_MOUSE DDB1- and CUL4-associated factor 0.00036 21.6 4.4 0.27 12.5 0.0 4.8 2 sp|Q3TZ89|SC31B_MOUSE Protein transport protein Sec31B 0.00069 20.7 0.1 30 6.0 0.0 4.6 3 sp|Q9R0D8|WDR54_MOUSE WD repeat-containing protein 54 0.0012 19.9 8.6 2 9.7 0.0 5.9 5 sp|A2AC93|DNAI2_MOUSE Dynein intermediate chain 2, axo 0.0015 19.6 0.1 11 7.4 0.0 3.8 2 sp|Q5RJG1|NOL10_MOUSE Nucleolar protein 10 OS=Mus musc 0.0017 19.4 2.3 0.34 12.1 0.1 3.2 2 sp|Q8CCN5|BCAS3_MOUSE Breast carcinoma-amplified seque 0.0039 18.3 2.9 22 6.4 0.0 5.6 3 sp|Q3UGF1|WDR19_MOUSE WD repeat-containing protein 19 0.0049 18.0 0.3 0.086 14.0 0.0 3.4 1 tr|Q3UH45|Q3UH45_MOUSE Tectonin beta-propeller repeat-c ------ inclusion threshold ------ 0.01 17.0 3.5 14 7.0 0.1 4.4 2 tr|Q8CFE8|Q8CFE8_MOUSE F-box and WD-40 domain protein 1 0.012 16.8 0.9 2.2 9.6 0.1 4.1 2 sp|A2RT67|DEND3_MOUSE DENN domain-containing protein 3 0.014 16.6 2.6 8.4 7.8 0.0 5.4 2 sp|E9PY46|IF140_MOUSE Intraflagellar transport protein 0.049 14.8 0.4 0.81 11.0 0.0 3.1 1 sp|Q80U93|NU214_MOUSE Nuclear pore complex protein Nup 0.4 11.9 5.1 19 6.7 0.0 4.6 2 sp|Q6P7W2|SHKB1_MOUSE SH3KBP1-binding protein 1 OS=Mus 2 9.7 10.3 0.99 10.7 0.3 4.2 2 sp|Q9CR39|WIPI3_MOUSE WD repeat domain phosphoinositid 3.5 9.0 4.0 14 7.0 0.1 3.6 1 sp|Q9CWF6|BBS2_MOUSE Bardet-Biedl syndrome 2 protein 3.6 8.9 9.1 25 6.3 0.0 4.7 2 sp|Q8BFX3|KCTD3_MOUSE BTB/POZ domain-containing protei Domain annotation for each sequence (and alignments): >> tr|D3Z7A5|D3Z7A5_MOUSE Dynein assembly factor with WDR repeat domains 1 OS=Mus musculus OX=10090 GN=Daw1 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 20.6 0.0 8.4e-06 0.00072 4 38 .] 85 120 .. 82 120 .. 0.92 2 ! 30.8 0.0 5.1e-09 4.4e-07 1 38 [] 124 163 .. 124 163 .. 0.92 3 ! 37.1 0.1 5.2e-11 4.4e-09 1 38 [] 167 205 .. 167 205 .. 0.95 4 ! 27.6 0.2 5.3e-08 4.6e-06 2 38 .] 210 247 .. 209 247 .. 0.93 5 ! 26.6 0.5 1e-07 9e-06 1 38 [] 251 289 .. 251 289 .. 0.92 6 ! 21.8 0.0 3.6e-06 0.00031 1 38 [] 293 331 .. 293 331 .. 0.90 7 ! 33.0 0.0 1e-09 8.7e-08 1 38 [] 335 373 .. 335 373 .. 0.95 8 ! 34.5 0.1 3.6e-10 3e-08 1 37 [. 377 414 .. 377 415 .] 0.94 Alignments for each domain: == domain 1 score: 20.6 bits; conditional E-value: 8.4e-06 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++l++H + t +a ++ g+ +++Gs+D+t+++Wd tr|D3Z7A5|D3Z7A5_MOUSE 85 FKVLRAHiLPLTNVALNKAGSCFITGSYDRTCKVWD 120 57899**8889************************9 PP == domain 2 score: 30.8 bits; conditional E-value: 5.1e-09 TEEEEEEESSSS.EEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGHss.vtsla.fspdgawlasGsdDgtvriWd 38 g+ l+tl+GH++ v+++a ++p+g+ +a+Gs D+t+++W+ tr|D3Z7A5|D3Z7A5_MOUSE 124 GEELHTLEGHKNvVYAIAfNNPYGDKIATGSFDKTCKLWS 163 5789******6647*************************5 PP == domain 3 score: 37.1 bits; conditional E-value: 5.2e-11 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+c +t++GH + +l+f+p ++ +a+Gs+D t ++Wd tr|D3Z7A5|D3Z7A5_MOUSE 167 GKCYHTFRGHtAEIVCLSFNPQSTVVATGSMDTTAKLWD 205 79********76699***********************9 PP == domain 4 score: 27.6 bits; conditional E-value: 5.3e-08 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + + tltGH + sl+f+ +g+ +++Gs D+tv +Wd tr|D3Z7A5|D3Z7A5_MOUSE 210 EEVVTLTGHlAEIISLSFDTSGDRIITGSFDHTVVVWD 247 66789****99988***********************9 PP == domain 5 score: 26.6 bits; conditional E-value: 1e-07 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g++++tl GH ++s f+ d +++++Gs+D+t+++Wd tr|D3Z7A5|D3Z7A5_MOUSE 251 GRKVHTLIGHcAEISSALFNWDCSLILTGSMDKTCMLWD 289 5789******666*9999********************9 PP == domain 6 score: 21.8 bits; conditional E-value: 3.6e-06 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+ + tltGH + + + +f+ g+++a++s Dgt r+++ tr|D3Z7A5|D3Z7A5_MOUSE 293 GKYVATLTGHdDEILDSCFDYTGKLIATASADGTARVYN 331 57789*****555*9999*******************97 PP == domain 7 score: 33.0 bits; conditional E-value: 1e-09 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++c+++l+GH + ++ ++f+p g+ l++Gs D+t riWd tr|D3Z7A5|D3Z7A5_MOUSE 335 RKCVTKLEGHeGEISKISFNPQGNRLLTGSSDKTARIWD 373 58********888****************99*******9 PP == domain 8 score: 34.5 bits; conditional E-value: 3.6e-10 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 gqcl++l+GH + + s+af+ g+ +++Gs+D+++riW tr|D3Z7A5|D3Z7A5_MOUSE 377 GQCLQVLEGHtDEIFSCAFNYKGNIVITGSKDNSCRIW 414 79********666************************* PP >> sp|Q8VEJ4|NLE1_MOUSE Notchless protein homolog 1 OS=Mus musculus OX=10090 GN=Nle1 PE=1 SV=4 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 37.7 0.1 3.4e-11 2.9e-09 2 38 .] 105 142 .. 104 142 .. 0.91 2 ! 28.7 0.9 2.3e-08 2e-06 5 38 .] 150 184 .. 146 184 .. 0.91 3 ! 31.2 0.2 3.7e-09 3.2e-07 3 38 .] 191 232 .. 189 232 .. 0.91 4 ! 31.0 0.2 4.4e-09 3.7e-07 1 37 [. 236 272 .. 236 273 .. 0.90 5 ? 10.5 0.1 0.014 1.2 4 38 .] 280 357 .. 277 357 .. 0.83 6 ! 29.0 0.0 1.9e-08 1.7e-06 2 38 .] 363 400 .. 362 400 .. 0.91 7 ! 33.9 0.2 5.5e-10 4.7e-08 1 38 [] 404 442 .. 404 442 .. 0.94 8 ! 34.0 0.0 4.9e-10 4.2e-08 6 37 .. 451 483 .. 446 484 .. 0.88 Alignments for each domain: == domain 1 score: 37.7 bits; conditional E-value: 3.4e-11 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +c+ +l+GH v s+afsp g++lasGs D tvr+Wd sp|Q8VEJ4|NLE1_MOUSE 105 RCTSSLEGHsEAVISVAFSPTGKYLASGSGDTTVRFWD 142 6999*****54488**************99*******9 PP == domain 2 score: 28.7 bits; conditional E-value: 2.3e-08 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 t++GH +v s+++spdg+ lasG+++g v +Wd sp|Q8VEJ4|NLE1_MOUSE 150 FTCKGHrHWVLSISWSPDGKKLASGCKNGQVLLWD 184 5789**777*************************9 PP == domain 3 score: 31.2 bits; conditional E-value: 3.7e-09 EEEEEESS.SSEEEEE.....EETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtsla.....fspdgawlasGsdDgtvriWd 38 rtltGH +++t+l+ +p+ +++as+s+Dg+vr+Wd sp|Q8VEJ4|NLE1_MOUSE 191 VGRTLTGHsKWITGLSweplhMNPECRYVASSSKDGSVRVWD 232 5699****999****9999999999999*************9 PP == domain 4 score: 31.0 bits; conditional E-value: 4.4e-09 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 g+c r+ltGH +svt+l++ dg + s+s D+t+++W sp|Q8VEJ4|NLE1_MOUSE 236 GRCERILTGHtQSVTCLRWGGDGLL-YSASQDRTIKVW 272 6899******999****88888877.89********** PP == domain 5 score: 10.5 bits; conditional E-value: 0.014 EEEEESS.SSEEEEEEETTSSE..........................................EEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgaw..........................................lasGsdDgtvriWd 38 rtl GH +v+ +a s d a+ l+sGsdD t+ +W+ sp|Q8VEJ4|NLE1_MOUSE 280 CRTLQGHgHWVNTMALSTDYALrtgafepaeatvnaqdlqgslkelkerassrynlvrgqgperLVSGSDDFTLFLWS 357 578899944499999888888888888888888888888888899999988999999999999999***********5 PP == domain 6 score: 29.0 bits; conditional E-value: 1.9e-08 EEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 ++l tGH+ ++ + fspd++ +as+s D+++++Wd sp|Q8VEJ4|NLE1_MOUSE 363 KPLARMTGHQAlINQVLFSPDSRIVASASFDKSIKLWD 400 5777889**6679***************99*******9 PP == domain 7 score: 33.9 bits; conditional E-value: 5.5e-10 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+ l +l+GH v+ +a+s d+++l+sGs D t+++Wd sp|Q8VEJ4|NLE1_MOUSE 404 GKYLASLRGHvAAVYQIAWSADSRLLVSGSSDSTLKVWD 442 577999****999****************99*******9 PP == domain 8 score: 34.0 bits; conditional E-value: 4.9e-10 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriW 37 l GH + v+++++spdg+ +asG++D+ +riW sp|Q8VEJ4|NLE1_MOUSE 451 DLPGHaDEVYAVDWSPDGQRVASGGKDKCLRIW 483 489**777************************* PP >> sp|Q5SQM0|EMAL6_MOUSE Echinoderm microtubule-associated protein-like 6 OS=Mus musculus OX=10090 GN=Eml6 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.0 0.0 0.00024 0.02 4 38 .] 54 91 .. 51 91 .. 0.88 2 ! 16.8 1.3 0.00014 0.012 8 38 .] 105 136 .. 94 136 .. 0.77 3 ? 7.2 0.1 0.15 13 2 37 .. 141 177 .. 140 178 .. 0.80 4 ! 11.6 0.0 0.0059 0.51 9 38 .] 235 263 .. 226 263 .. 0.69 5 ! 24.1 0.0 6.6e-07 5.7e-05 2 38 .] 315 353 .. 314 353 .. 0.89 6 ? 6.7 0.0 0.21 18 13 34 .. 369 390 .. 358 392 .. 0.87 7 ? 10.3 0.0 0.015 1.3 10 32 .. 403 430 .. 397 430 .. 0.85 8 ! 21.6 1.9 4.1e-06 0.00036 3 37 .. 555 591 .. 553 592 .. 0.87 9 ! 14.6 0.2 0.00069 0.059 5 38 .] 721 757 .. 717 757 .. 0.91 10 ! 13.7 0.7 0.0013 0.11 2 33 .. 762 796 .. 761 802 .. 0.77 11 ! 11.1 0.0 0.0085 0.73 4 38 .] 896 929 .. 894 929 .. 0.76 12 ! 12.9 0.0 0.0022 0.19 8 37 .. 994 1025 .. 988 1026 .. 0.87 13 ? 5.4 0.1 0.53 45 14 35 .. 1044 1065 .. 1042 1068 .. 0.87 14 ? 1.5 0.0 9.4 8e+02 4 25 .. 1118 1140 .. 1115 1162 .. 0.84 15 ? 6.5 0.1 0.25 21 3 31 .. 1183 1213 .. 1181 1216 .. 0.87 16 ! 13.3 0.3 0.0017 0.14 5 37 .. 1232 1266 .. 1229 1267 .. 0.81 17 ? 3.0 0.1 3.1 2.7e+02 8 38 .] 1411 1447 .. 1404 1447 .. 0.72 18 ? 4.2 0.1 1.3 1.1e+02 9 37 .. 1460 1491 .. 1450 1492 .. 0.78 19 ! 23.3 0.1 1.2e-06 0.0001 8 38 .] 1683 1715 .. 1678 1715 .. 0.90 20 ? 3.8 0.0 1.8 1.5e+02 9 32 .. 1728 1750 .. 1720 1754 .. 0.82 21 ? 5.4 0.0 0.52 45 13 34 .. 1773 1794 .. 1758 1798 .. 0.83 22 ! 21.7 0.8 3.8e-06 0.00032 7 37 .. 1923 1955 .. 1917 1956 .. 0.85 Alignments for each domain: == domain 1 score: 16.0 bits; conditional E-value: 0.00024 EEEEESS.SSEEEEEEETTSSEEEEE..ETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasG..sdDgtvriWd 38 ++ + GH +++ sla +pd++++a+G ++ + + iW+ sp|Q5SQM0|EMAL6_MOUSE 54 QKFFLGHnDDIISLALHPDKTLIATGqvGKEPYICIWN 91 56678**66688**************999********8 PP == domain 2 score: 16.8 bits; conditional E-value: 0.00014 ESSSSEEEEEEETTSSEEEEE..ETTSEEEEEE CS WD40 8 tGHssvtslafspdgawlasG..sdDgtvriWd 38 +H +v +laf++dg+ las + ++tv iWd sp|Q5SQM0|EMAL6_MOUSE 105 HTH-GVACLAFDSDGQHLASVglDAKNTVCIWD 136 355.7*************9752546*******9 PP == domain 3 score: 7.2 bits; conditional E-value: 0.15 EEEEEEESSSS.EEEEEEETTSSE.EEEEETTSEEEEE CS WD40 2 qclrtltGHss.vtslafspdgaw.lasGsdDgtvriW 37 ++l + tGHs+ + +++++p+++ ++s++ +++++W sp|Q5SQM0|EMAL6_MOUSE 141 KLLASATGHSDrIFDISWDPYQPNrMVSCG-VKHIKFW 177 6777889**556**********99877888.7777777 PP == domain 4 score: 11.6 bits; conditional E-value: 0.0059 SS.SSEEEEEEETTSSE.....EEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgaw.....lasGsdDgtvriWd 38 +H ++ sl + +a+G++Dg +r+Wd sp|Q5SQM0|EMAL6_MOUSE 235 AHsAGIFSL-------YaceegFATGGRDGCIRLWD 263 564447777.......333555799**********9 PP == domain 5 score: 24.1 bits; conditional E-value: 6.6e-07 EEEEEEESS.SS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ss.vtslafspdgawlasGsdDgtvriWd 38 +++ +l GH + ++la +p +++ ++GsdD++vr+W+ sp|Q5SQM0|EMAL6_MOUSE 315 KPMLILQGHcEGeLWALALHPKKPLAVTGSDDRSVRLWS 353 578899***7336*************************5 PP == domain 6 score: 6.7 bits; conditional E-value: 0.21 EEEEEEETTSSEEEEEETTSEE CS WD40 13 vtslafspdgawlasGsdDgtv 34 v+s++fspdg+ la G++Dg+ sp|Q5SQM0|EMAL6_MOUSE 369 VRSVSFSPDGSQLALGMKDGSF 390 99**********9889999985 PP == domain 7 score: 10.3 bits; conditional E-value: 0.015 S.SS....EEEEEEETTSSEEEEEETTS CS WD40 10 H.ss....vtslafspdgawlasGsdDg 32 H ++ ++ ++fspdg++la Gs Dg sp|Q5SQM0|EMAL6_MOUSE 403 HiKDrkevIHEMKFSPDGSYLAVGSNDG 430 666667767999*************997 PP == domain 8 score: 21.6 bits; conditional E-value: 4.1e-06 EEEEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawla.sGsdDgtvriW 37 + r++ GH +vt +++s+d +w++ +G+ D++v W sp|Q5SQM0|EMAL6_MOUSE 555 KFRKYVGHsAHVTNVRWSHDFQWVLsTGGADHSVFQW 591 578999**777************7648999******9 PP == domain 9 score: 14.6 bits; conditional E-value: 0.00069 EEEESS.SSEEEEEEETTSSEEEEE..ETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasG..sdDgtvriWd 38 r + GH +++ sl +p ++++a+G ++D v++Wd sp|Q5SQM0|EMAL6_MOUSE 721 RLYLGHdDDILSLTIHPVKDYVATGqvGRDAAVHVWD 757 5677**888****************9999*******9 PP == domain 10 score: 13.7 bits; conditional E-value: 0.0013 EEEEEEESS.SS.EEEEEEETTSSEEEEEE.TTSE CS WD40 2 qclrtltGH.ss.vtslafspdgawlasGs.dDgt 33 +cl l+GH + v++l+fs dg+ l+s + dD + sp|Q5SQM0|EMAL6_MOUSE 762 KCLSLLKGHhQRgVCALDFSADGKCLVSVGlDDFH 796 79999****7447*************975535655 PP == domain 11 score: 11.1 bits; conditional E-value: 0.0085 EEEEESS.SSE...EEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssv...tslafspdgawlasGsdDgtvriWd 38 l+t ++H ++v ++l d+ ++ +G++Dg v +Wd sp|Q5SQM0|EMAL6_MOUSE 896 LKTVKAHdGPVfamYAL----DKGFV-TGGKDGIVELWD 929 78999997778333555....66665.8**********9 PP == domain 12 score: 12.9 bits; conditional E-value: 0.0022 ESS..SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 8 tGH..ssvtslafspdgawlasGsdDgtvriW 37 GH + v++la +p + a+ sdD+t+riW sp|Q5SQM0|EMAL6_MOUSE 994 QGHmeGEVWGLAAHPLLPICATVSDDKTLRIW 1025 6999555************9999********* PP == domain 13 score: 5.4 bits; conditional E-value: 0.53 EEEEEETTSSEEEEEETTSEEE CS WD40 14 tslafspdgawlasGsdDgtvr 35 +++afspdg+ la G Dg+ sp|Q5SQM0|EMAL6_MOUSE 1044 RCCAFSPDGKALAVGLNDGSFL 1065 59************97799865 PP == domain 14 score: 1.5 bits; conditional E-value: 9.4 EEEEESS.SSEEEEEEETTSSEE CS WD40 4 lrtltGH.ssvtslafspdgawl 25 +++++G s +t++++++ g++l sp|Q5SQM0|EMAL6_MOUSE 1118 VGICKGAsSYITHIDWDSRGKLL 1140 6789999555*******999986 PP == domain 15 score: 6.5 bits; conditional E-value: 0.25 EEEEEESSSSEEEEE...EETTSSEEEEEETT CS WD40 3 clrtltGHssvtsla...fspdgawlasGsdD 31 c +++ +Hs+vt++ +dg++la+G+ D sp|Q5SQM0|EMAL6_MOUSE 1183 CEGIWPAHSDVTDVNaanLTKDGSLLATGD-D 1213 778899**9988888888*********998.6 PP == domain 16 score: 13.3 bits; conditional E-value: 0.0017 EEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgawla.sGsdDgtvriW 37 +++ GH +vt +++ ++ + l+ G+ D ++iW sp|Q5SQM0|EMAL6_MOUSE 1232 KKYVGHsAHVTNVRWLHNDSVLLtVGGADTALMIW 1266 5789**777****977777776526899******* PP == domain 17 score: 3.0 bits; conditional E-value: 3.1 ESS.SSEEEEEEETTSSE...EEEE..ETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgaw...lasG..sdDgtvriWd 38 H +++ +l ++++ ++ +a++ + ++++iWd sp|Q5SQM0|EMAL6_MOUSE 1411 LEHtDDILCLTVNQHPKYrnvVATSqiGTTPSIHIWD 1447 46977799999666666666566645545*******9 PP == domain 18 score: 4.2 bits; conditional E-value: 1.3 SS.SSEEEEEEETTSSEEEEEET..TSEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsd..DgtvriW 37 H ++v+ + fs g++l+s + +t+ +W sp|Q5SQM0|EMAL6_MOUSE 1460 FHtKGVNYINFSATGKLLVSVGVdpEHTITVW 1491 68889*************98775478888888 PP == domain 19 score: 23.3 bits; conditional E-value: 1.2e-06 ESS..SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH..ssvtslafspdgawlasGsdDgtvriWd 38 +GH + +++la++p++++++s+s Dgt riWd sp|Q5SQM0|EMAL6_MOUSE 1683 DGHmeGEIWGLATHPSKDMFISASNDGTARIWD 1715 69*9555*************************9 PP == domain 20 score: 3.8 bits; conditional E-value: 1.8 SSSSEEEEEEETTSSEEEEEETTS CS WD40 9 GHssvtslafspdgawlasGsdDg 32 GH ++ a+spdg ++a G+++g sp|Q5SQM0|EMAL6_MOUSE 1728 GH-AARCAAYSPDGEMVAIGMKNG 1750 78.56899**********999776 PP == domain 21 score: 5.4 bits; conditional E-value: 0.52 EEEEEEETTSSEEEEEETTSEE CS WD40 13 vtslafspdgawlasGsdDgtv 34 + +++ spd+++la Gs +tv sp|Q5SQM0|EMAL6_MOUSE 1773 IQDIRISPDNRFLAVGSSEQTV 1794 89999***********877776 PP == domain 22 score: 21.7 bits; conditional E-value: 3.8e-06 EESS.SSEEEEEEETTSSEEE.EEETTSEEEEE CS WD40 7 ltGH.ssvtslafspdgawla.sGsdDgtvriW 37 + GH +vt ++fs+d ++++ +G+dD++v +W sp|Q5SQM0|EMAL6_MOUSE 1923 YFGHsAHVTNIRFSSDDKYVVsTGGDDCSVFVW 1955 4499777************875899******** PP >> sp|Q8JZX3|POC1A_MOUSE POC1 centriolar protein homolog A OS=Mus musculus OX=10090 GN=Poc1a PE=2 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 34.3 0.2 4e-10 3.4e-08 4 37 .. 12 46 .. 9 47 .. 0.94 2 ! 42.9 0.1 7.5e-13 6.4e-11 6 37 .. 56 88 .. 51 89 .. 0.91 3 ! 28.6 0.5 2.5e-08 2.1e-06 5 38 .] 97 131 .. 94 131 .. 0.92 4 ! 39.1 0.1 1.3e-11 1.1e-09 4 38 .] 138 173 .. 135 173 .. 0.95 5 ! 34.5 0.2 3.4e-10 2.9e-08 2 38 .] 178 215 .. 177 215 .. 0.94 6 ! 24.0 0.1 7e-07 6e-05 3 36 .. 221 255 .. 219 257 .. 0.87 7 ! 24.6 0.0 4.6e-07 3.9e-05 1 38 [] 261 299 .. 261 299 .. 0.92 Alignments for each domain: == domain 1 score: 34.3 bits; conditional E-value: 4e-10 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 r+++GH + vt+++fs + + lasGs+D t++iW sp|Q8JZX3|POC1A_MOUSE 12 ERHFKGHrDAVTCVDFSLNTKHLASGSMDSTLMIW 46 69*****888************************* PP == domain 2 score: 42.9 bits; conditional E-value: 7.5e-13 EEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 6 tltGHss.vtslafspdgawlasGsdDgtvriW 37 +tGH++ vt++ fsp+g++lasGs+D+tvriW sp|Q8JZX3|POC1A_MOUSE 56 RFTGHKDaVTCVNFSPSGHLLASGSRDKTVRIW 88 589**555************************* PP == domain 3 score: 28.6 bits; conditional E-value: 2.5e-08 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++++H v+s+ f++dg+ l+++sdD+tv++W+ sp|Q8JZX3|POC1A_MOUSE 97 TVFRAHtATVRSVHFCSDGQSLVTASDDKTVKVWS 131 579***777*************************5 PP == domain 4 score: 39.1 bits; conditional E-value: 1.3e-11 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 l +lt H ++v++ +fspdg++++s+sdD+tv++Wd sp|Q8JZX3|POC1A_MOUSE 138 LFSLTQHiNWVRCAKFSPDGRLIVSASDDKTVKLWD 173 7899*******************************9 PP == domain 5 score: 34.5 bits; conditional E-value: 3.4e-10 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +c++++ H ++vt ++f+p+g+ +a++++D+tv++Wd sp|Q8JZX3|POC1A_MOUSE 178 ECIHSYCEHgGFVTYVDFHPSGTCIAAAGMDNTVKVWD 215 8********777*************99999*******9 PP == domain 6 score: 24.0 bits; conditional E-value: 7e-07 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvri 36 +l+++ H v++l+f+p+g++l+++s D t++i sp|Q8JZX3|POC1A_MOUSE 221 LLQHYQLHsAAVNALSFHPSGNYLITASSDSTLKI 255 68899999555**************9988*****9 PP == domain 7 score: 24.6 bits; conditional E-value: 4.6e-07 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g++l+tl GH ++ t +afs+ g ++asG+ D v++W+ sp|Q8JZX3|POC1A_MOUSE 261 GRLLYTLHGHqGPATTVAFSRTGEYFASGGSDEQVMVWK 299 57899*****8889***************88*******6 PP >> sp|Q8BQM8|EMAL5_MOUSE Echinoderm microtubule-associated protein-like 5 OS=Mus musculus OX=10090 GN=Eml5 PE=2 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 13.1 0.0 0.002 0.17 4 38 .] 54 91 .. 51 91 .. 0.90 2 ? 8.7 0.4 0.05 4.2 8 38 .] 105 136 .. 96 136 .. 0.77 3 ! 11.7 0.0 0.0054 0.46 5 38 .] 230 263 .. 226 263 .. 0.68 4 ! 24.6 0.0 4.7e-07 4e-05 3 38 .] 316 353 .. 314 353 .. 0.86 5 ? 10.3 0.0 0.015 1.3 10 34 .. 403 432 .. 396 435 .. 0.85 6 ? 4.7 0.1 0.93 80 5 25 .. 445 466 .. 441 472 .. 0.80 7 ? 2.5 0.3 4.4 3.8e+02 11 37 .. 519 545 .. 496 546 .. 0.75 8 ! 23.0 1.9 1.5e-06 0.00013 3 38 .] 555 592 .. 553 592 .. 0.87 9 ! 24.7 0.1 4.4e-07 3.8e-05 2 38 .] 718 757 .. 717 757 .. 0.92 10 ! 14.8 0.2 0.00056 0.048 2 38 .] 762 802 .. 761 802 .. 0.83 11 ? 8.1 0.0 0.074 6.4 4 38 .] 896 929 .. 894 929 .. 0.77 12 ! 20.4 0.0 9.7e-06 0.00083 8 38 .] 994 1026 .. 988 1026 .. 0.89 13 ? 5.4 0.1 0.56 48 14 33 .. 1044 1063 .. 1042 1066 .. 0.88 14 ! 11.5 0.1 0.0062 0.53 5 37 .. 1232 1266 .. 1228 1267 .. 0.88 15 ? 2.1 0.1 5.8 5e+02 6 38 .] 1417 1462 .. 1413 1462 .. 0.68 16 ? 10.8 0.1 0.011 0.92 3 37 .. 1468 1506 .. 1466 1507 .. 0.80 17 ! 25.8 0.2 1.9e-07 1.7e-05 8 38 .] 1698 1730 .. 1692 1730 .. 0.89 18 ? 2.7 0.0 3.9 3.3e+02 9 32 .. 1743 1765 .. 1737 1769 .. 0.81 19 ? 8.5 0.0 0.055 4.8 13 34 .. 1788 1809 .. 1774 1813 .. 0.83 20 ? 6.1 0.1 0.32 28 6 30 .. 1890 1917 .. 1886 1925 .. 0.75 21 ! 13.6 0.7 0.0014 0.12 7 38 .] 1938 1971 .. 1933 1971 .. 0.78 Alignments for each domain: == domain 1 score: 13.1 bits; conditional E-value: 0.002 EEEEESS.SSEEEEEEETTSSEEEEE..ETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasG..sdDgtvriWd 38 ++ ++GH +++ sla +p+ ++a+G ++ + + +Wd sp|Q8BQM8|EMAL5_MOUSE 54 QKFFRGHsDDIISLALHPERVLVATGqvGKEPYICVWD 91 6779***66688**************999********9 PP == domain 2 score: 8.7 bits; conditional E-value: 0.05 ESSSSEEEEEEETTSSEEEE.E..ETTSEEEEEE CS WD40 8 tGHssvtslafspdgawlas.G..sdDgtvriWd 38 +H ++ +laf+ dg+ l+s G s ++ v +Wd sp|Q8BQM8|EMAL5_MOUSE 105 HTH-GIACLAFDLDGQRLVSvGldS-KNAVCVWD 136 356.7************99625645.*******9 PP == domain 3 score: 11.7 bits; conditional E-value: 0.0054 EEEE.SS.SSEEEEEEETTSSE....EEEEETTSEEEEEE CS WD40 5 rtlt.GH.ssvtslafspdgaw....lasGsdDgtvriWd 38 rt+ +H ++ s+ + +a+G++Dg +r+Wd sp|Q8BQM8|EMAL5_MOUSE 230 RTIQgAHtAGIFSM------NSceegFATGGRDGCIRLWD 263 55542565557777......33334479***********9 PP == domain 4 score: 24.6 bits; conditional E-value: 4.7e-07 EEEEEESS.SS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ss.vtslafspdgawlasGsdDgtvriWd 38 + + GH + ++la++p +++ ++GsdD++vriW+ sp|Q8BQM8|EMAL5_MOUSE 316 PFLIMQGHcEGeLWALAVHPTKPLAVTGSDDRSVRIWS 353 566778**7336*************************5 PP == domain 5 score: 10.3 bits; conditional E-value: 0.015 S.SS....EEEEEEETTSSEEEEEETTSEE CS WD40 10 H.ss....vtslafspdgawlasGsdDgtv 34 H ++ ++ l++spdga+la G+ D +v sp|Q8BQM8|EMAL5_MOUSE 403 HiKDrkeaIHELKYSPDGAYLAVGCNDSSV 432 66556667999*************999987 PP == domain 6 score: 4.7 bits; conditional E-value: 0.93 EEEESS.SSEEEEEEETTSSEE CS WD40 5 rtltGH.ssvtslafspdgawl 25 +++ G s++t+l++s+d+++l sp|Q8BQM8|EMAL5_MOUSE 445 GECVGSlSFITHLDWSSDSRYL 466 455556569**********996 PP == domain 7 score: 2.5 bits; conditional E-value: 4.4 SSEEEEEEETTSSE....EEEEETTSEEEEE CS WD40 11 ssvtslafspdgaw....lasGsdDgtvriW 37 ++++s+ dg++ l++++d g v+++ sp|Q8BQM8|EMAL5_MOUSE 519 NDINSV----DGNYvgqvLVTADDYGVVKLF 545 357777....5555555489**99***9996 PP == domain 8 score: 23.0 bits; conditional E-value: 1.5e-06 EEEEEESS.SSEEEEEEETTSSEEEE.EETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlas.GsdDgtvriWd 38 + r++ GH +vt +++s+d +w++s G+ D++v W+ sp|Q8BQM8|EMAL5_MOUSE 555 KFRKYIGHsAHVTNVRWSHDYQWVISiGGADHSVFQWK 592 578999**777************9755888*******5 PP == domain 9 score: 24.7 bits; conditional E-value: 4.4e-07 EEEEEEESS.SSEEEEEEETTSSEEEEE..ETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasG..sdDgtvriWd 38 +++r + GH +++ +la +p ++++a+G ++D+++++Wd sp|Q8BQM8|EMAL5_MOUSE 718 NTQRFYLGHdDDILCLAIHPLKDYVATGqvGRDPSIHVWD 757 5688899**888****************9999*******9 PP == domain 10 score: 14.8 bits; conditional E-value: 0.00056 EEEEEEESS.SS.EEEEEEETTSSEEEEE..ETTSEEEEEE CS WD40 2 qclrtltGH.ss.vtslafspdgawlasG..sdDgtvriWd 38 ++l +l+G + +++++fs dg+ las +d +t+ +Wd sp|Q8BQM8|EMAL5_MOUSE 762 KPLSILKGYhQYgICAVDFSADGKRLASVgiDDSHTIVLWD 802 6788888885447*************9752659*******9 PP == domain 11 score: 8.1 bits; conditional E-value: 0.074 EEEEESS.SSEEEEEEETTSSE...EEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgaw...lasGsdDgtvriWd 38 ++t ++H ++v s+ +a+ +++G++Dg v +Wd sp|Q8BQM8|EMAL5_MOUSE 896 VKTVKAHdGPVFSM-----HALekgFVTGGKDGMVALWD 929 68899997779777.....333444679**********9 PP == domain 12 score: 20.4 bits; conditional E-value: 9.7e-06 ESS..SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH..ssvtslafspdgawlasGsdDgtvriWd 38 GH + v++la++p+ + a+ sdD+t+riWd sp|Q8BQM8|EMAL5_MOUSE 994 QGHmeGEVWGLATHPYLPICATVSDDKTLRIWD 1026 6999555**************99*********9 PP == domain 13 score: 5.4 bits; conditional E-value: 0.56 EEEEEETTSSEEEEEETTSE CS WD40 14 tslafspdgawlasGsdDgt 33 ++++fspdg+ la G Dg+ sp|Q8BQM8|EMAL5_MOUSE 1044 RCCCFSPDGKALAVGLNDGS 1063 599**********9977997 PP == domain 14 score: 11.5 bits; conditional E-value: 0.0062 EEEESS.SSEEEEEEETTSSEEEE.EETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlas.GsdDgtvriW 37 +++ +H ++vt +++ d ++l++ G+ D ++++W sp|Q8BQM8|EMAL5_MOUSE 1232 KKYVAHsTHVTNVRWTYDDSMLVTlGGADMSLMVW 1266 678899888*************988778******* PP == domain 15 score: 2.1 bits; conditional E-value: 5.8 EEESS.SSEEEEEEETTSSE...EEEE..ET.......TSEEEEEE CS WD40 6 tltGH.ssvtslafspdgaw...lasG..sd.......DgtvriWd 38 + H +++ +l ++++ ++ +a+G +d ++v+iWd sp|Q8BQM8|EMAL5_MOUSE 1417 FYQEHnDDILCLTVNQHPKFiniVATGqvGDsadmsatAPSVHIWD 1462 57789666*9**9999999966556765543344555577888887 PP == domain 16 score: 10.8 bits; conditional E-value: 0.011 EEEEEE.SS.SSEEEEEEETTSSEEEEEE.T.TSEEEEE CS WD40 3 clrtlt.GH.ssvtslafspdgawlasGs.d.DgtvriW 37 +l +l+ H ++v+s++fs g++l+s + d +tv iW sp|Q8BQM8|EMAL5_MOUSE 1468 TLSILRcSHsKGVCSVSFSATGKLLLSVGlDpEHTVTIW 1506 566676689888************997663579999999 PP == domain 17 score: 25.8 bits; conditional E-value: 1.9e-07 ESS..SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH..ssvtslafspdgawlasGsdDgtvriWd 38 GH +++++la++p+ ++++s+ +Dgtvr+Wd sp|Q8BQM8|EMAL5_MOUSE 1698 NGHvdGPIWGLATHPSRDFFLSAAEDGTVRLWD 1730 69*9556*************************9 PP == domain 18 score: 2.7 bits; conditional E-value: 3.9 SSSSEEEEEEETTSSEEEEEETTS CS WD40 9 GHssvtslafspdgawlasGsdDg 32 GH + +++sp+g+++a G+++g sp|Q8BQM8|EMAL5_MOUSE 1743 GH-AARTVCYSPEGDMVAIGMKNG 1765 67.457899*********999776 PP == domain 19 score: 8.5 bits; conditional E-value: 0.055 EEEEEEETTSSEEEEEETTSEE CS WD40 13 vtslafspdgawlasGsdDgtv 34 +++++fspd+++la Gs ++v sp|Q8BQM8|EMAL5_MOUSE 1788 IHDIRFSPDSRYLAVGSSENSV 1809 99**************866655 PP == domain 20 score: 6.1 bits; conditional E-value: 0.32 EEESS..SS.EEEEEEETTSSEEEEEET CS WD40 6 tltGH..ss.vtslafspdgawlasGsd 30 +++ H + vt+ ++s++g l++G+d sp|Q8BQM8|EMAL5_MOUSE 1890 IWSRHaeKAdVTCACVSHSGISLVTGDD 1917 5566865335***************984 PP == domain 21 score: 13.6 bits; conditional E-value: 0.0014 EESSSS.EEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 7 ltGHss.vtslafspdgawla.sGsdDgtvriWd 38 + GHs+ vt ++f + + ++ +G+dD+++ +W+ sp|Q8BQM8|EMAL5_MOUSE 1938 FLGHSPhVTNIRFTSGDRHVVsAGGDDCSLFVWK 1971 559*667*****7777777663779********6 PP >> sp|O88879|APAF_MOUSE Apoptotic protease-activating factor 1 OS=Mus musculus OX=10090 GN=Apaf1 PE=1 SV=3 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 14.9 0.0 0.00054 0.047 8 37 .. 612 642 .. 604 643 .. 0.86 2 ! 30.8 0.1 5e-09 4.3e-07 3 38 .] 649 685 .. 647 685 .. 0.89 3 ! 20.7 0.2 7.8e-06 0.00067 1 38 [] 689 729 .. 689 729 .. 0.85 4 ! 35.4 0.1 1.9e-10 1.6e-08 3 38 .] 735 771 .. 733 771 .. 0.91 5 ? 4.4 0.1 1.1 96 13 38 .] 801 825 .. 789 825 .. 0.85 6 ? 6.4 0.1 0.26 23 5 38 .] 836 868 .. 832 868 .. 0.86 7 ! 28.1 0.4 3.6e-08 3.1e-06 6 37 .. 877 909 .. 873 910 .. 0.93 8 ? 6.1 0.0 0.32 27 13 36 .. 964 987 .. 952 989 .. 0.88 9 ! 19.4 0.2 2.1e-05 0.0018 8 38 .] 1000 1031 .. 992 1031 .. 0.87 10 ? 8.0 0.0 0.079 6.8 7 38 .] 1040 1071 .. 1037 1071 .. 0.80 11 ! 15.4 0.3 0.00037 0.031 5 38 .] 1079 1113 .. 1075 1113 .. 0.88 12 ! 30.5 0.1 6.4e-09 5.5e-07 2 38 .] 1118 1155 .. 1117 1155 .. 0.93 13 ! 14.8 0.4 0.00059 0.051 9 38 .] 1176 1204 .. 1159 1204 .. 0.78 Alignments for each domain: == domain 1 score: 14.9 bits; conditional E-value: 0.00054 ESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriW 37 + H + v++ +fs+dg+ +as++ D+t+ ++ sp|O88879|APAF_MOUSE 612 RPHtDAVYHACFSQDGQRIASCGADKTLQVF 642 569566****************99***9886 PP == domain 2 score: 30.8 bits; conditional E-value: 5e-09 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +l +++H + v ++afs+d +++a++s D++v+iWd sp|O88879|APAF_MOUSE 649 KLLDIKAHeDEVLCCAFSSDDSYIATCSADKKVKIWD 685 5666799*777*************************9 PP == domain 3 score: 20.7 bits; conditional E-value: 7.8e-06 TEEEEEEESS.SSEEEEEEETTSSE..EEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgaw..lasGsdDgtvriWd 38 g++++t++ H v+++ f ++ la+Gs D +++Wd sp|O88879|APAF_MOUSE 689 GKLVHTYDEHsEQVNCCHFTNKSNHllLATGSNDFFLKLWD 729 689*******555****988888884458***********9 PP == domain 4 score: 35.4 bits; conditional E-value: 1.9e-10 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 c t GH +sv++++fspd +las+s Dgt+r+Wd sp|O88879|APAF_MOUSE 735 CRNTMFGHtNSVNHCRFSPDDELLASCSADGTLRLWD 771 566666**999*************************9 PP == domain 5 score: 4.4 bits; conditional E-value: 1.1 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 v ++++s dg+ ++ + +++v ++d sp|O88879|APAF_MOUSE 801 VKCCSWSADGDKIIVAA-KNKVLLFD 825 68**********99888.88888876 PP == domain 6 score: 6.4 bits; conditional E-value: 0.26 EEEESS.SSEEEEEEETTSSEEEEE.ETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasG.sdDgtvriWd 38 + tGH s + ++fsp+ ++ + + s v +W+ sp|O88879|APAF_MOUSE 836 H--TGHhSTIQYCDFSPYDHLAVIAlS-QYCVELWN 868 3..599888************888878.****9998 PP == domain 7 score: 28.1 bits; conditional E-value: 3.6e-08 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriW 37 ++GH s+v+++ fspdg+ ++++sdD+t+r+W sp|O88879|APAF_MOUSE 877 DCRGHlSWVHGVMFSPDGSSFLTASDDQTIRVW 909 589****************************** PP == domain 8 score: 6.1 bits; conditional E-value: 0.32 EEEEEEETTSSEEEEEETTSEEEE CS WD40 13 vtslafspdgawlasGsdDgtvri 36 v++++ sp+ ++a G++Dg ++i sp|O88879|APAF_MOUSE 964 VSCCCLSPHLEYVAFGDEDGAIKI 987 99***********99********9 PP == domain 9 score: 19.4 bits; conditional E-value: 2.1e-05 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 GH + v++++f dg+ l+s+s+D + +W+ sp|O88879|APAF_MOUSE 1000 VGHkKAVRHIQFTADGKTLISSSEDSVIQVWN 1031 4**888*************************8 PP == domain 10 score: 8.0 bits; conditional E-value: 0.079 EESS.SSEEEEEEETTSSEEEEE.ETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasG.sdDgtvriWd 38 l +H v +++ +d+++l + s Dgtv++W+ sp|O88879|APAF_MOUSE 1040 LQAHqETVKDFRLLQDSRLL--SwSFDGTVKVWN 1071 56786569999999999998..5566*******8 PP == domain 11 score: 15.4 bits; conditional E-value: 0.00037 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 r +t H + v s+a s+d + ++s s D+t +iW+ sp|O88879|APAF_MOUSE 1079 RDFTCHqGTVLSCAISSDATKFSSTSADKTAKIWS 1113 7799**777*************98899*******5 PP == domain 12 score: 30.5 bits; conditional E-value: 6.4e-09 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++l++l+GH ++v++ afs dg +la+G+d+g +riW+ sp|O88879|APAF_MOUSE 1118 SPLHELKGHnGCVRCSAFSLDGILLATGDDNGEIRIWN 1155 689******655*************************8 PP == domain 13 score: 14.8 bits; conditional E-value: 0.00059 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 +H ++vt+++fspd++ l+s g ++ W+ sp|O88879|APAF_MOUSE 1176 THgGWVTDVCFSPDSKTLVS-A-GGYLKWWN 1204 68777*************95.4.67777665 PP >> sp|P63005|LIS1_MOUSE Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus musculus OX=10090 GN=Pafah1b # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.1 0.0 2.8e-06 0.00024 7 38 .] 104 136 .. 100 136 .. 0.94 2 ! 35.6 0.3 1.6e-10 1.4e-08 4 38 .] 143 178 .. 140 178 .. 0.93 3 ! 32.6 0.1 1.4e-09 1.2e-07 2 37 .. 183 219 .. 182 220 .. 0.93 4 ! 30.0 0.1 9.2e-09 7.9e-07 2 37 .. 225 261 .. 224 262 .. 0.96 5 ! 24.9 0.0 3.7e-07 3.1e-05 2 38 .] 267 324 .. 266 324 .. 0.92 6 ! 35.3 0.6 1.9e-10 1.6e-08 2 38 .] 329 366 .. 328 366 .. 0.96 7 ! 33.7 0.0 6.2e-10 5.3e-08 2 37 .. 371 407 .. 370 408 .. 0.93 Alignments for each domain: == domain 1 score: 22.1 bits; conditional E-value: 2.8e-06 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 l+GH s+vt + f+p + ++s+s+D t+++Wd sp|P63005|LIS1_MOUSE 104 LSGHrSPVTRVIFHPVFSVMVSASEDATIKVWD 136 89**999*************************9 PP == domain 2 score: 35.6 bits; conditional E-value: 1.6e-10 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 rtl+GH +sv +++f+++g++las+s D t+++Wd sp|P63005|LIS1_MOUSE 143 ERTLKGHtDSVQDISFDHSGKLLASCSADMTIKLWD 178 689****888*************************9 PP == domain 3 score: 32.6 bits; conditional E-value: 1.4e-09 EEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGHss.vtslafspdgawlasGsdDgtvriW 37 +c+rt GH++ v+s+a p+g+ ++s+s+D+t+++W sp|P63005|LIS1_MOUSE 183 ECIRTMHGHDHnVSSVAIMPNGDHIVSASRDKTIKMW 219 8********556************************* PP == domain 4 score: 30.0 bits; conditional E-value: 9.2e-09 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 c++t+tGH +v+ ++ ++dg+++as+s D+tvr+W sp|P63005|LIS1_MOUSE 225 YCVKTFTGHrEWVRMVRPNQDGTLIASCSNDQTVRVW 261 69*******999************************* PP == domain 5 score: 24.9 bits; conditional E-value: 3.7e-07 EEEEEEESSSS.EEEEEEETTSSE....................EEEEETTSEEEEEE CS WD40 2 qclrtltGHss.vtslafspdgaw....................lasGsdDgtvriWd 38 +c +l+ H + v ++++ p++++ l+sGs+D+t+++Wd sp|P63005|LIS1_MOUSE 267 ECKAELREHEHvVECISWAPESSYssiseatgsetkksgkpgpfLLSGSRDKTIKMWD 324 688999***8867*************999999999999999999899**********9 PP == domain 6 score: 35.3 bits; conditional E-value: 1.9e-10 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 cl tl GH ++v+++ f++ g++++s+ dD+t+r+Wd sp|P63005|LIS1_MOUSE 329 MCLMTLVGHdNWVRGVLFHSGGKFILSCADDKTLRVWD 366 69*******999*************************9 PP == domain 7 score: 33.7 bits; conditional E-value: 6.2e-10 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +c++tl +H +vtsl+f++ +++++Gs D+tv++W sp|P63005|LIS1_MOUSE 371 RCMKTLNAHeHFVTSLDFHKTAPYVVTGSVDQTVKVW 407 79*******666************************* PP >> sp|P61965|WDR5_MOUSE WD repeat-containing protein 5 OS=Mus musculus OX=10090 GN=Wdr5 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 36.2 0.0 1e-10 8.7e-09 5 37 .. 39 72 .. 35 72 .. 0.93 2 ! 36.0 0.6 1.1e-10 9.8e-09 3 38 .] 79 115 .. 77 115 .. 0.91 3 ! 39.8 0.2 7.3e-12 6.3e-10 1 38 [] 119 157 .. 119 157 .. 0.96 4 ! 36.8 0.3 6.7e-11 5.8e-09 1 38 [] 161 199 .. 161 199 .. 0.95 5 ! 25.2 0.0 3e-07 2.6e-05 1 38 [] 203 242 .. 203 242 .. 0.92 6 ! 25.1 0.1 3.2e-07 2.7e-05 1 38 [] 246 287 .. 246 287 .. 0.79 7 ! 16.5 0.0 0.00017 0.015 3 38 .] 293 331 .. 291 331 .. 0.79 Alignments for each domain: == domain 1 score: 36.2 bits; conditional E-value: 1e-10 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriW 37 tl GH + v+s++fsp+g wlas+s D+ ++iW sp|P61965|WDR5_MOUSE 39 FTLAGHtKAVSSVKFSPNGEWLASSSADKLIKIW 72 5788**999************************* PP == domain 2 score: 36.0 bits; conditional E-value: 1.1e-10 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +t++GH +++++a+s+d+++l+s+sdD+t++iWd sp|P61965|WDR5_MOUSE 79 FEKTISGHkLGISDVAWSSDSNLLVSASDDKTLKIWD 115 568999**766*************************9 PP == domain 3 score: 39.8 bits; conditional E-value: 7.3e-12 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+cl+tl+GH + v ++ f+p +++++sGs D +vriWd sp|P61965|WDR5_MOUSE 119 GKCLKTLKGHsNYVFCCNFNPQSNLIVSGSFDESVRIWD 157 79********777*************************9 PP == domain 4 score: 36.8 bits; conditional E-value: 6.7e-11 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+cl+tl +H ++v+++ f++dg++++s+s+Dg +riWd sp|P61965|WDR5_MOUSE 161 GKCLKTLPAHsDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199 79********666*************************9 PP == domain 5 score: 25.2 bits; conditional E-value: 3e-07 TEEEEEEESS.SS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ss.vtslafspdgawlasGsdDgtvriWd 38 gqcl+tl ++ v+ ++fsp+g+++++++ D+t+++Wd sp|P61965|WDR5_MOUSE 203 GQCLKTLIDDdNPpVSFVKFSPNGKYILAATLDNTLKLWD 242 799***99776678**************9999*******9 PP == domain 6 score: 25.1 bits; conditional E-value: 3.2e-07 TEEEEEEESS.SS...EEEEE...EETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ss...vtsla...fspdgawlasGsdDgtvriWd 38 g+cl+t+tGH + + g+w++sGs+D+ v+iW+ sp|P61965|WDR5_MOUSE 246 GKCLKTYTGHkNEkycI---FanfSVTGGKWIVSGSEDNLVYIWN 287 79********7666663...333355666***************8 PP == domain 7 score: 16.5 bits; conditional E-value: 0.00017 EEEEEESSSS..E.EEEEEETTSSEEEEEE..TTSEEEEEE CS WD40 3 clrtltGHss..v.tslafspdgawlasGs..dDgtvriWd 38 +++l GH++ + t++ +p + +as+ D+t+++W+ sp|P61965|WDR5_MOUSE 293 IVQKLQGHTDvvIsTAC--HPTENIIASAAleNDKTIKLWK 331 578899**886445666..*******9986445*******6 PP >> sp|Q8BHD1|POC1B_MOUSE POC1 centriolar protein homolog B OS=Mus musculus OX=10090 GN=Poc1b PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 25.1 0.0 3.2e-07 2.8e-05 5 38 .] 12 46 .. 9 46 .. 0.92 2 ! 35.4 0.0 1.8e-10 1.6e-08 7 37 .. 56 87 .. 52 88 .. 0.92 3 ! 32.1 0.0 2e-09 1.7e-07 5 38 .] 96 130 .. 93 130 .. 0.93 4 ! 36.3 0.2 9.4e-11 8.1e-09 5 38 .] 138 172 .. 134 172 .. 0.85 5 ! 20.9 0.3 6.7e-06 0.00057 13 38 .] 189 214 .. 176 214 .. 0.73 6 ! 26.4 0.2 1.2e-07 1.1e-05 2 36 .. 219 254 .. 218 256 .. 0.91 7 ! 27.1 0.0 7.6e-08 6.6e-06 2 37 .. 261 297 .. 260 298 .. 0.93 Alignments for each domain: == domain 1 score: 25.1 bits; conditional E-value: 3.2e-07 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 r+++GH +ts +fsp+ + +a++s+D +++W+ sp|Q8BHD1|POC1B_MOUSE 12 RSFKGHkAAITSADFSPNCKQIATASWDTFLMLWS 46 89****666*************************5 PP == domain 2 score: 35.4 bits; conditional E-value: 1.8e-10 EESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 7 ltGHss.vtslafspdgawlasGsdDgtvriW 37 + GH++ vtsl+fsp g++las+s+D+tvr+W sp|Q8BHD1|POC1B_MOUSE 56 YVGHKDvVTSLQFSPQGNLLASASRDRTVRLW 87 67**9966************************ PP == domain 3 score: 32.1 bits; conditional E-value: 2e-09 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++++H +v+s++fs dg++l+++s+D+++++W+ sp|Q8BHD1|POC1B_MOUSE 96 SEFKAHtAPVRSVDFSADGQLLVTASEDKSIKVWS 130 5799**888*************************5 PP == domain 4 score: 36.3 bits; conditional E-value: 9.4e-11 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++l H +v++ +fspdg++++s+s+D+t++iWd sp|Q8BHD1|POC1B_MOUSE 138 YSLYRHtHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172 555556336*************************9 PP == domain 5 score: 20.9 bits; conditional E-value: 6.7e-06 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 + ++f+p+g+ +as++ D+ v+iWd sp|Q8BHD1|POC1B_MOUSE 189 ANFVDFNPNGTCIASAGSDHAVKIWD 214 36688********97655*******9 PP == domain 6 score: 26.4 bits; conditional E-value: 1.2e-07 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvri 36 ++l+++ H ++v++l+f+p g+ l+++s Dgtv++ sp|Q8BHD1|POC1B_MOUSE 219 KLLQHYQVHsCGVNCLSFHPLGNSLVTASSDGTVKM 254 6899*****777**************9988****96 PP == domain 7 score: 27.1 bits; conditional E-value: 7.6e-08 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 ++++tl GH ++v ++fs+dg +l+sG+ D v iW sp|Q8BHD1|POC1B_MOUSE 261 RLIYTLQGHtGPVFTVSFSKDGELLTSGGADAQVLIW 297 6899*****888************************* PP >> sp|Q9D7H2|WDR5B_MOUSE WD repeat-containing protein 5B OS=Mus musculus OX=10090 GN=Wdr5b PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 26.7 0.0 1e-07 8.8e-06 6 37 .. 34 66 .. 29 66 .. 0.89 2 ! 35.4 0.8 1.9e-10 1.6e-08 1 38 [] 71 109 .. 71 109 .. 0.94 3 ! 37.6 0.1 3.6e-11 3.1e-09 1 37 [. 113 150 .. 113 151 .. 0.94 4 ! 37.0 0.5 5.4e-11 4.7e-09 1 38 [] 155 193 .. 155 193 .. 0.96 5 ! 27.0 0.0 8.4e-08 7.2e-06 1 38 [] 197 236 .. 197 236 .. 0.88 6 ! 24.8 0.1 3.9e-07 3.4e-05 1 38 [] 240 281 .. 240 281 .. 0.89 7 ! 16.9 0.0 0.00013 0.011 4 38 .] 288 325 .. 285 325 .. 0.82 Alignments for each domain: == domain 1 score: 26.7 bits; conditional E-value: 1e-07 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriW 37 tl GH ++s++fsp+g wlas+ D + iW sp|Q9D7H2|WDR5B_MOUSE 34 TLAGHsAAISSVKFSPNGEWLASSAADALIIIW 66 788**555**************9988******9 PP == domain 2 score: 35.4 bits; conditional E-value: 1.9e-10 TEEEEEEESSSS..EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGHss..vtslafspdgawlasGsdDgtvriWd 38 g+c +tl GH s ++++a+s+d++ l+s+sdD+t+++Wd sp|Q9D7H2|WDR5B_MOUSE 71 GNCKKTLYGH-SleISDVAWSSDSSRLVSASDDKTLKVWD 109 69********.546*************************9 PP == domain 3 score: 37.6 bits; conditional E-value: 3.6e-11 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 g+cl+tl+GH ++v +++f+p +++++sGs D +v+iW sp|Q9D7H2|WDR5B_MOUSE 113 GKCLKTLKGHsDFVFCCDFNPPSNLIVSGSFDESVKIW 150 79********555************************* PP == domain 4 score: 37.0 bits; conditional E-value: 5.4e-11 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+cl+tl++H ++++++ f+ +g++++sGs+Dg +riWd sp|Q9D7H2|WDR5B_MOUSE 155 GKCLKTLSAHsDPISAVNFNCNGSLIVSGSYDGLCRIWD 193 79********666*************************9 PP == domain 5 score: 27.0 bits; conditional E-value: 8.4e-08 TEEEEEEE..SSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtlt..GHss.vtslafspdgawlasGsdDgtvriWd 38 gqclrtl G + v+ ++fsp+g+++++++ D+t+++Wd sp|Q9D7H2|WDR5B_MOUSE 197 GQCLRTLAdeGN-PpVSFVKFSPNGKYILTATLDNTLKLWD 236 79*****62366.56****************99*******9 PP == domain 6 score: 24.8 bits; conditional E-value: 3.9e-07 TEEEEEEESS.SS.........EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ss.........vtslafspdgawlasGsdDgtvriWd 38 g+cl+t+tGH + vt+ +w++sGs+D+ v+iW+ sp|Q9D7H2|WDR5B_MOUSE 240 GRCLKTYTGHkNEkyclfasfsVTGR------KWVVSGSEDNMVYIWN 281 68********7558888888888888......99*************8 PP == domain 7 score: 16.9 bits; conditional E-value: 0.00013 EEEEESSSS.EEEEEEETTSSEEEEEE..TTSEEEEEE CS WD40 4 lrtltGHss.vtslafspdgawlasGs..dDgtvriWd 38 ++ l GH++ v s a +p ++ +as+ D+t+++W+ sp|Q9D7H2|WDR5B_MOUSE 288 VQRLQGHTDvVISAACHPTKNIIASAAleNDKTIKVWS 325 67799**886579999*******9986445*******5 PP >> sp|Q8C092|TAF5_MOUSE Transcription initiation factor TFIID subunit 5 OS=Mus musculus OX=10090 GN=Taf5 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 13.6 0.1 0.0014 0.12 11 38 .] 472 499 .. 462 499 .. 0.81 2 ! 34.0 0.0 4.8e-10 4.1e-08 3 38 .] 536 572 .. 534 572 .. 0.92 3 ! 23.1 0.2 1.4e-06 0.00012 2 37 .. 577 613 .. 576 613 .. 0.91 4 ! 39.5 0.0 9.1e-12 7.8e-10 2 38 .] 619 656 .. 618 656 .. 0.97 5 ! 41.7 0.1 1.9e-12 1.6e-10 1 38 [] 660 698 .. 660 698 .. 0.95 6 ! 37.8 0.0 3.2e-11 2.7e-09 4 38 .] 705 740 .. 702 740 .. 0.92 Alignments for each domain: == domain 1 score: 13.6 bits; conditional E-value: 0.0014 SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriWd 38 ++ t++++ +d++++a G D tvr+W+ sp|Q8C092|TAF5_MOUSE 472 QGLTAVDVTDDSSLIAGGFADSTVRVWS 499 56899*********986668*******5 PP == domain 2 score: 34.0 bits; conditional E-value: 4.8e-10 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 l++l GH ++v++ +fspd ++l+s+s+Dgtvr+W+ sp|Q8C092|TAF5_MOUSE 536 ELKILYGHsGPVYGASFSPDRNYLLSSSEDGTVRLWS 572 689999**777*************************5 PP == domain 3 score: 23.1 bits; conditional E-value: 1.4e-06 EEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGHss.vtslafspdgawlasGsdDgtvriW 37 +cl ++GH+ v++ +fsp+g +++sG+ D+ r+W sp|Q8C092|TAF5_MOUSE 577 TCLVGYKGHNYpVWDTQFSPYGYYFVSGGHDRVARLW 613 588889***556****************99******* PP == domain 4 score: 39.5 bits; conditional E-value: 9.1e-12 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 q+lr++ GH +v++ +++p+++++a+Gs D+tvr+Wd sp|Q8C092|TAF5_MOUSE 619 QPLRIFAGHlADVNCTRYHPNSNYVATGSADRTVRLWD 656 89***********************************9 PP == domain 5 score: 41.7 bits; conditional E-value: 1.9e-12 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+c+r++tGH ++++sl fsp+g++la+G Dg v +Wd sp|Q8C092|TAF5_MOUSE 660 GNCVRIFTGHkGPIHSLTFSPNGRFLATGATDGRVLLWD 698 79********777****************88*******9 PP == domain 6 score: 37.8 bits; conditional E-value: 3.2e-11 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++l+GH + v+sl+fs+dg lasGs+D+tvr+Wd sp|Q8C092|TAF5_MOUSE 705 VGELKGHtDTVCSLRFSRDGEILASGSMDNTVRLWD 740 5789***666*************************9 PP >> sp|Q8BHB4|WDR3_MOUSE WD repeat-containing protein 3 OS=Mus musculus OX=10090 GN=Wdr3 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.8 0.0 1.7e-06 0.00015 2 37 .. 56 92 .. 55 93 .. 0.90 2 ! 21.5 0.1 4.5e-06 0.00039 5 38 .] 101 135 .. 97 135 .. 0.90 3 ! 14.8 0.0 0.00057 0.049 4 38 .] 142 177 .. 139 177 .. 0.89 4 ? 9.6 0.0 0.026 2.2 2 38 .] 182 219 .. 180 219 .. 0.81 5 ! 13.2 0.1 0.0018 0.15 6 38 .] 409 441 .. 401 441 .. 0.89 6 ! 17.1 0.0 0.00011 0.0091 3 38 .] 487 523 .. 485 523 .. 0.88 7 ? 10.8 0.0 0.01 0.88 12 37 .. 550 575 .. 540 575 .. 0.86 8 ! 27.4 0.0 6e-08 5.1e-06 6 37 .. 585 617 .. 580 617 .. 0.91 9 ! 14.8 0.2 0.00057 0.049 1 38 [] 622 660 .. 622 660 .. 0.93 10 ! 36.3 0.1 9.6e-11 8.3e-09 2 37 .. 665 701 .. 664 702 .. 0.92 Alignments for each domain: == domain 1 score: 22.8 bits; conditional E-value: 1.7e-06 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +++ +l G + vt+l+ spdg la G +Dg +ri+ sp|Q8BHB4|WDR3_MOUSE 56 EKILILQGNkQEVTCLCPSPDGLHLAVGYEDGAIRIF 92 6678899**666************************7 PP == domain 2 score: 21.5 bits; conditional E-value: 4.5e-06 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 t+ GH vtsl++++ g lasGs+D v iWd sp|Q8BHB4|WDR3_MOUSE 101 ITFNGHkAAVTSLKYDQLGGRLASGSKDTDVIIWD 135 5899**666****99999999*************9 PP == domain 3 score: 14.8 bits; conditional E-value: 0.00057 EEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 l+ l+GH++ vt f ++ ++l+++++D v+ Wd sp|Q8BHB4|WDR3_MOUSE 142 LYRLKGHKDaVTQALFLRERNLLVTSGKDTMVKWWD 177 66799**555*9999********************9 PP == domain 4 score: 9.6 bits; conditional E-value: 0.026 EEEEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtsla.fspdgawlasGsdDgtvriWd 38 c +t GH + v++l +s +++ l++G D +r Wd sp|Q8BHB4|WDR3_MOUSE 182 HCFKTMVGHrTEVWGLVlVSEEKR-LITGAADSELRAWD 219 5888999**999****95555555.568*99*******9 PP == domain 5 score: 13.2 bits; conditional E-value: 0.0018 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 t+ GH s+v+ l+fs+d+ ++s+ +++iW+ sp|Q8BHB4|WDR3_MOUSE 409 TIGGHrSDVRTLSFSSDNIAVLSAA-ADSIKIWN 441 467*******************999.*******8 PP == domain 6 score: 17.1 bits; conditional E-value: 0.00011 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +l t+ +H + +s++ spd++ +++G+ D+ v++Wd sp|Q8BHB4|WDR3_MOUSE 487 LLETIAAHdGALWSMSLSPDQRGFVTGGADKAVKFWD 523 566778996669************************9 PP == domain 7 score: 10.8 bits; conditional E-value: 0.01 SEEEEEEETTSSEEEEEETTSEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriW 37 +v ++++sp++++la + D+tv+++ sp|Q8BHB4|WDR3_MOUSE 550 DVLCVSYSPNQKLLAVSLLDCTVKVF 575 599***********98877*****95 PP == domain 8 score: 27.4 bits; conditional E-value: 6e-08 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriW 37 +l GH +v +++ s+dga++a+Gs D++v+iW sp|Q8BHB4|WDR3_MOUSE 585 SLYGHkLPVLCMDISHDGALIATGSADRNVKIW 617 688**777************************* PP == domain 9 score: 14.8 bits; conditional E-value: 0.00057 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+c r+l +H +sv l+f p +++++++++D++++ Wd sp|Q8BHB4|WDR3_MOUSE 622 GDCHRSLFAHdDSVMYLRFVPKSHLFFTAGKDHKIKQWD 660 57889999**888*************************9 PP == domain 10 score: 36.3 bits; conditional E-value: 9.6e-11 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 ++++tl+GH + +++la+sp+g++++s+s D+++r+W sp|Q8BHB4|WDR3_MOUSE 665 EHIQTLEGHhQEIWCLAVSPSGDYVVSASHDKSLRLW 701 5789*****888**************9999******* PP >> sp|Q9QXE7|TBL1X_MOUSE F-box-like/WD repeat-containing protein TBL1X OS=Mus musculus OX=10090 GN=Tbl1x PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 24.5 0.1 5.2e-07 4.4e-05 5 38 .] 176 210 .. 173 210 .. 0.91 2 ! 28.5 0.4 2.7e-08 2.3e-06 3 37 .. 227 265 .. 223 266 .. 0.82 3 ! 20.5 0.1 9e-06 0.00077 4 38 .] 272 307 .. 269 307 .. 0.89 4 ? 4.3 0.0 1.2 1.1e+02 7 36 .. 317 346 .. 311 346 .. 0.75 5 ! 37.6 0.0 3.5e-11 3e-09 2 38 .] 353 390 .. 352 390 .. 0.95 6 ! 24.2 0.1 6.2e-07 5.3e-05 3 38 .] 396 441 .. 394 441 .. 0.91 7 ! 41.2 0.2 2.7e-12 2.3e-10 1 38 [] 445 483 .. 445 483 .. 0.96 8 ! 10.9 0.4 0.0099 0.85 1 36 [. 487 522 .. 487 524 .. 0.91 Alignments for each domain: == domain 1 score: 24.5 bits; conditional E-value: 5.2e-07 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++l+GH s v +a++p +++lasGs D t riW+ sp|Q9QXE7|TBL1X_MOUSE 176 TVLRGHeSEVFICAWNPVSDLLASGSGDSTARIWN 210 579***88898889***********99*******8 PP == domain 2 score: 28.5 bits; conditional E-value: 2.7e-08 EEEEEESS.SS....EEEEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGH.ss....vtslafspdgawlasGsdDgtvriW 37 c+r+ GH + vtsl++++dg++la+Gs+Dg riW sp|Q9QXE7|TBL1X_MOUSE 227 CIRE-GGHdVPsnkdVTSLDWNSDGTLLATGSYDGFARIW 265 5555.4997224567************************* PP == domain 3 score: 20.5 bits; conditional E-value: 9e-06 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 tl H +++ +l++++ g++++s++ D+t iWd sp|Q9QXE7|TBL1X_MOUSE 272 ASTLGQHkGPIFALKWNKKGNYILSAGVDKTTIIWD 307 5689999777**************9999*******9 PP == domain 4 score: 4.3 bits; conditional E-value: 1.2 EESS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvri 36 + H + +++++ + ++ as+s D +++ sp|Q9QXE7|TBL1X_MOUSE 317 FPFHsAPALDVDWQNNTTF-ASCSTDMCIHV 346 5667444569999999999.78888*99875 PP == domain 5 score: 37.6 bits; conditional E-value: 3.5e-11 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++++t+ GH + v++++++p+g +las+sdD t++iW+ sp|Q9QXE7|TBL1X_MOUSE 353 RPVKTFQGHtNEVNAIKWDPSGMLLASCSDDMTLKIWS 390 5899*****999*************************5 PP == domain 6 score: 24.2 bits; conditional E-value: 6.2e-07 EEEEEESS.SSEEEEEEETTSSE.........EEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw.........lasGsdDgtvriWd 38 c++ l +H + ++ +++sp g+ las+s D tvr+Wd sp|Q9QXE7|TBL1X_MOUSE 396 CVHDLQAHsKEIYTIKWSPTGPAtsnpnsnimLASASFDSTVRLWD 441 9*******888*****9999999999999988999999*******9 PP == domain 7 score: 41.2 bits; conditional E-value: 2.7e-12 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g c++tlt H +v+s+afspdg++lasGs D+ v+iW+ sp|Q9QXE7|TBL1X_MOUSE 445 GVCIHTLTKHqEPVYSVAFSPDGKYLASGSFDKCVHIWN 483 57********888*************************8 PP == domain 8 score: 10.9 bits; conditional E-value: 0.0099 TEEEEEEESSSSEEEEEEETTSSEE.EEEETTSEEEE CS WD40 1 gqclrtltGHssvtslafspdgawl.asGsdDgtvri 36 g+++++++G +++ ++++ g+ + as+s Dg+v + sp|Q9QXE7|TBL1X_MOUSE 487 GSLVHSYRGTGGIFEVCWNARGDKVgASAS-DGSVCV 522 5789******99************988899.***987 PP >> sp|Q8BHJ5|TBL1R_MOUSE F-box-like/WD repeat-containing protein TBL1XR1 OS=Mus musculus OX=10090 GN=Tbl1xr1 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 24.0 0.1 7.3e-07 6.3e-05 6 38 .] 164 197 .. 160 197 .. 0.91 2 ! 23.6 0.1 9.3e-07 7.9e-05 11 37 .. 226 252 .. 212 253 .. 0.84 3 ! 20.6 0.1 8.3e-06 0.00071 4 38 .] 259 294 .. 256 294 .. 0.89 4 ? 5.8 0.1 0.4 34 7 36 .. 304 333 .. 298 334 .. 0.77 5 ! 39.4 0.1 9.6e-12 8.3e-10 2 38 .] 340 377 .. 339 377 .. 0.95 6 ! 25.0 0.1 3.5e-07 3e-05 2 38 .] 382 428 .. 381 428 .. 0.90 7 ! 40.3 0.2 5.1e-12 4.3e-10 3 38 .] 434 470 .. 432 470 .. 0.95 8 ? 10.5 0.3 0.013 1.1 2 36 .. 475 509 .. 474 511 .. 0.91 Alignments for each domain: == domain 1 score: 24.0 bits; conditional E-value: 7.3e-07 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +l+GH s v +a++p +++lasGs D t riW+ sp|Q8BHJ5|TBL1R_MOUSE 164 VLRGHeSEVFICAWNPVSDLLASGSGDSTARIWN 197 689**88898889***********99*******8 PP == domain 2 score: 23.6 bits; conditional E-value: 9.3e-07 SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriW 37 ++vtsl+++++g++la+Gs+Dg riW sp|Q8BHJ5|TBL1R_MOUSE 226 KDVTSLDWNSEGTLLATGSYDGFARIW 252 56************************* PP == domain 3 score: 20.6 bits; conditional E-value: 8.3e-06 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 tl H +++ +l++++ g++++s++ D+t iWd sp|Q8BHJ5|TBL1R_MOUSE 259 ASTLGQHkGPIFALKWNKKGNFILSAGVDKTTIIWD 294 5689999777**************9999*******9 PP == domain 4 score: 5.8 bits; conditional E-value: 0.4 EESS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvri 36 + H + ++++++++++ as+s D +++ sp|Q8BHJ5|TBL1R_MOUSE 304 FPFHsAPALDVDWQSNNTF-ASCSTDMCIHV 333 56674445699********.68888*99876 PP == domain 5 score: 39.4 bits; conditional E-value: 9.6e-12 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++++t+ GH + v++++++p g++las+sdD t++iW+ sp|Q8BHJ5|TBL1R_MOUSE 340 RPIKTFQGHtNEVNAIKWDPTGNLLASCSDDMTLKIWS 377 5899*****999*************************5 PP == domain 6 score: 25.0 bits; conditional E-value: 3.5e-07 EEEEEEESS.SSEEEEEEETTSSE.........EEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw.........lasGsdDgtvriWd 38 +c++ l +H + ++ +++sp g+ las+s D tvr+Wd sp|Q8BHJ5|TBL1R_MOUSE 382 NCVHDLQAHnKEIYTIKWSPTGPGtnnpnanlmLASASFDSTVRLWD 428 79*******888*****8888888888888888899999*******9 PP == domain 7 score: 40.3 bits; conditional E-value: 5.1e-12 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 c++tlt H +v+s+afspdg++lasGs D+ v+iW+ sp|Q8BHJ5|TBL1R_MOUSE 434 CIHTLTKHqEPVYSVAFSPDGRYLASGSFDKCVHIWN 470 9*******888*************************8 PP == domain 8 score: 10.5 bits; conditional E-value: 0.013 EEEEEEESSSSEEEEEEETTSSEE.EEEETTSEEEE CS WD40 2 qclrtltGHssvtslafspdgawl.asGsdDgtvri 36 ++++++G +++ ++++ g+ + as+s Dg+v + sp|Q8BHJ5|TBL1R_MOUSE 475 ALVHSYRGTGGIFEVCWNAAGDKVgASAS-DGSVCV 509 579******99************988899.***987 PP >> sp|Q91WQ5|TAF5L_MOUSE TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L OS= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.4 0.0 0.03 2.6 18 38 .] 276 296 .. 253 296 .. 0.84 2 ! 20.3 0.0 1e-05 0.00089 2 38 .] 333 370 .. 332 370 .. 0.93 3 ! 24.9 0.2 3.7e-07 3.1e-05 7 38 .] 380 412 .. 374 412 .. 0.89 4 ! 39.7 0.0 8e-12 6.8e-10 3 38 .] 418 454 .. 416 454 .. 0.96 5 ! 35.7 0.0 1.4e-10 1.2e-08 2 38 .] 459 496 .. 458 496 .. 0.94 6 ! 40.1 0.1 5.8e-12 5e-10 3 38 .] 502 538 .. 500 538 .. 0.93 7 ? 2.9 0.0 3.2 2.8e+02 1 28 [. 553 581 .. 553 584 .. 0.81 Alignments for each domain: == domain 1 score: 9.4 bits; conditional E-value: 0.03 EETTSSEEEEEETTSEEEEEE CS WD40 18 fspdgawlasGsdDgtvriWd 38 s+d+++la+G d+ +++W+ sp|Q91WQ5|TAF5L_MOUSE 276 ISSDSKLLAAGFDNSCIKLWS 296 799********99*******5 PP == domain 2 score: 20.3 bits; conditional E-value: 1e-05 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + +++l+GH ++v+s +f d++ l+s+s+D ++r Wd sp|Q91WQ5|TAF5L_MOUSE 333 TEMKILRGHcGPVYSTRFLADSSGLLSCSEDMSIRYWD 370 56899****888*************************9 PP == domain 3 score: 24.9 bits; conditional E-value: 3.7e-07 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + GH +v++++ sp + ++asGs D+t r+W+ sp|Q91WQ5|TAF5L_MOUSE 380 YQGHaYPVWDVDISPFSLYFASGSHDRTARLWS 412 78**777****************99*******5 PP == domain 4 score: 39.7 bits; conditional E-value: 8e-12 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +lr++ GH +v +++f+p++++la+Gs D+tvr+W+ sp|Q91WQ5|TAF5L_MOUSE 418 PLRIYAGHlADVDCVKFHPNSNYLATGSTDKTVRLWS 454 799*********************************5 PP == domain 5 score: 35.7 bits; conditional E-value: 1.4e-10 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + +r +tGH ++v sl+fsp+g++las+++D+ +++Wd sp|Q91WQ5|TAF5L_MOUSE 459 NSVRLFTGHrGPVLSLSFSPNGKYLASAGEDQRLKLWD 496 67899****999*************************9 PP == domain 6 score: 40.1 bits; conditional E-value: 5.8e-12 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + ++l+GH +s+tslafspd+ ++as+s+D++vr+Wd sp|Q91WQ5|TAF5L_MOUSE 502 LFKELRGHtDSITSLAFSPDSGLIASASMDNSVRVWD 538 6789****888*************************9 PP == domain 7 score: 2.9 bits; conditional E-value: 3.2 TEEEEEEESS.SSEEEEEEETTSSEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasG 28 g++++++tG+ s+v s++f + +l++G sp|Q91WQ5|TAF5L_MOUSE 553 GELVGVYTGQmSNVLSVQFMACNLLLVTG 581 57899******99****776666666665 PP >> sp|Q9D994|WDR38_MOUSE WD repeat-containing protein 38 OS=Mus musculus OX=10090 GN=Wdr38 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 27.0 0.1 7.9e-08 6.8e-06 5 37 .. 20 53 .. 18 53 .. 0.89 2 ! 38.4 0.5 2.1e-11 1.8e-09 2 38 .] 59 96 .. 58 96 .. 0.92 3 ! 33.5 0.1 7.2e-10 6.2e-08 2 37 .. 101 137 .. 100 138 .. 0.95 4 ! 28.3 3.4 3.1e-08 2.7e-06 3 38 .] 144 180 .. 142 180 .. 0.92 5 ! 28.6 1.0 2.5e-08 2.2e-06 5 38 .] 191 224 .. 188 224 .. 0.91 6 ! 26.1 0.0 1.6e-07 1.3e-05 6 38 .] 233 266 .. 228 266 .. 0.89 7 ? 7.6 0.0 0.11 9.5 1 29 [. 270 299 .. 270 300 .. 0.80 Alignments for each domain: == domain 1 score: 27.0 bits; conditional E-value: 7.9e-08 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriW 37 r + H + v++ afspdg+ l+++sdDg v++W sp|Q9D994|WDR38_MOUSE 20 RFYGQHhGEVNCSAFSPDGRTLLTASDDGCVYVW 53 556777677************************* PP == domain 2 score: 38.4 bits; conditional E-value: 2.1e-11 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++l+ l GH ++v s++fspdg+++as+s D+++r+Wd sp|Q9D994|WDR38_MOUSE 59 RLLWRLAGHrGPVKSCCFSPDGRLIASSSSDHSIRLWD 96 6778899**999**************9988*******9 PP == domain 3 score: 33.5 bits; conditional E-value: 7.2e-10 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +cl++l+GH sv ++fspd++ lasG++D+ +W sp|Q9D994|WDR38_MOUSE 101 KCLHVLKGHqRSVETVSFSPDSKQLASGGWDKRAIVW 137 8********777************************9 PP == domain 4 score: 28.3 bits; conditional E-value: 3.1e-08 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++ l GH +s+ s +fsp ++ la+Gs+D tv+iWd sp|Q9D994|WDR38_MOUSE 144 RVHLLVGHcDSIQSSDFSPTSDSLATGSWDSTVHIWD 180 578899**888*************************9 PP == domain 5 score: 28.6 bits; conditional E-value: 2.5e-08 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + l+GH +++++l++s +g + asGs+D+t+ +W+ sp|Q9D994|WDR38_MOUSE 191 HNLEGHtGNISCLCYSASGLL-ASGSWDKTICVWK 224 7799**777************.79**********6 PP == domain 6 score: 26.1 bits; conditional E-value: 1.6e-07 EEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGHss.vtslafspdgawlasGsdDgtvriWd 38 l+GH+ v+slafspd las+++ +tv++Wd sp|Q9D994|WDR38_MOUSE 233 QLKGHTIwVNSLAFSPDELKLASAGYSRTVKVWD 266 589**3369*************9999*******9 PP == domain 7 score: 7.6 bits; conditional E-value: 0.11 TEEEEEEESSSSE.EEEEEETTSSEEEEEE CS WD40 1 gqclrtltGHssv.tslafspdgawlasGs 29 g+cl tl+G +v +++ f pdg++l+sG sp|Q9D994|WDR38_MOUSE 270 GKCLETLKGMLDVaHACIFTPDGKLLVSGA 299 678888887756767777*********995 PP >> sp|Q8C4J7|TBL3_MOUSE Transducin beta-like protein 3 OS=Mus musculus OX=10090 GN=Tbl3 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 4.2 0.0 1.3 1.1e+02 4 29 .. 58 85 .. 55 105 .. 0.79 2 ! 20.0 0.0 1.3e-05 0.0011 10 38 .] 108 137 .. 99 137 .. 0.92 3 ! 14.1 0.3 0.00094 0.081 4 38 .] 144 181 .. 138 181 .. 0.70 4 ! 26.4 0.2 1.2e-07 1.1e-05 2 38 .] 186 223 .. 185 223 .. 0.96 5 ? 3.8 0.0 1.8 1.5e+02 23 37 .. 261 274 .. 252 275 .. 0.74 6 ! 13.9 0.2 0.0011 0.097 6 38 .] 371 404 .. 367 404 .. 0.76 7 ! 14.6 0.7 0.00069 0.059 3 37 .. 413 449 .. 412 449 .. 0.64 8 ! 28.1 0.0 3.8e-08 3.2e-06 4 37 .. 472 506 .. 469 506 .. 0.92 9 ! 27.4 0.1 6.1e-08 5.2e-06 2 37 .. 512 548 .. 511 548 .. 0.95 10 ! 24.1 0.1 6.9e-07 5.9e-05 2 37 .. 554 590 .. 553 591 .. 0.88 11 ! 14.4 0.8 0.00078 0.067 2 38 .] 596 633 .. 595 633 .. 0.90 Alignments for each domain: == domain 1 score: 4.2 bits; conditional E-value: 1.3 EEEEESS..SSEEEEEEETTSSEEEEEE CS WD40 4 lrtltGH..ssvtslafspdgawlasGs 29 lr+l+ ++ts++ spd l+++s sp|Q8C4J7|TBL3_MOUSE 58 LRSLEQEdqEDITSFDLSPDDEVLVTAS 85 66666443345*************9988 PP == domain 2 score: 20.0 bits; conditional E-value: 1.3e-05 S.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvriWd 38 H +v s+af+ +++la+G+ Dg vr+Wd sp|Q8C4J7|TBL3_MOUSE 108 HtAPVASMAFDATSTLLATGGCDGAVRVWD 137 766799**************88*******9 PP == domain 3 score: 14.1 bits; conditional E-value: 0.00094 EEEEESSSS..EEEEEEETTSSEEE..EEETTSEEEEEE CS WD40 4 lrtltGHss..vtslafspdgawla..sGsdDgtvriWd 38 +++++G + v+ +af+pd + l+ s+ D ++r+W+ sp|Q8C4J7|TBL3_MOUSE 144 THHFRGS-PgvVHLVAFHPDPTRLLlfSSAVDTSIRVWS 181 3455555.375677779****9964449989*******5 PP == domain 4 score: 26.4 bits; conditional E-value: 1.2e-07 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +cl +lt+H s vtsl+fs g+ ++s+++D+ + +Wd sp|Q8C4J7|TBL3_MOUSE 186 SCLAVLTAHySAVTSLSFSEGGHTMLSSGRDKICIVWD 223 79*******999*************99999*******9 PP == domain 5 score: 3.8 bits; conditional E-value: 1.8 SEEEEEETTSEEEEE CS WD40 23 awlasGsdDgtvriW 37 ++l+ ++d g +r+W sp|Q8C4J7|TBL3_MOUSE 261 HFLT-AGDQGILRVW 274 5565.666******* PP == domain 6 score: 13.9 bits; conditional E-value: 0.0011 EEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGHss.vtslafspdgawlasGsdDgtvriWd 38 +l GH++ v +l++ + g ++as+ +D+++riW+ sp|Q8C4J7|TBL3_MOUSE 371 ILHGHTDiVLALDVFRKGWLFASCAKDQSIRIWK 404 6889*66479996555544478999********6 PP == domain 7 score: 14.6 bits; conditional E-value: 0.00069 EEEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtsla.fspdgawlasGsdDgtvriW 37 c+ +GH sv ++ ++l++Gs D+tv++W sp|Q8C4J7|TBL3_MOUSE 413 CVAQGSGHtHSVGTICcSRLKESFLVTGSQDCTVKLW 449 66667899544633331233444489*********** PP == domain 8 score: 28.1 bits; conditional E-value: 3.8e-08 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 ++t + H ++++sla+sp+ ++la+Gs D+t ++W sp|Q8C4J7|TBL3_MOUSE 472 QTTRRCHdKDINSLAVSPNDKLLATGSQDRTAKLW 506 566789*999************************* PP == domain 9 score: 27.4 bits; conditional E-value: 6.1e-08 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 q+l+++tGH + + ++fsp + la++s Dgt+++W sp|Q8C4J7|TBL3_MOUSE 512 QLLGVFTGHrRGLWNVQFSPTDQVLATASADGTIKLW 548 7899*****888************************* PP == domain 10 score: 24.1 bits; conditional E-value: 6.9e-07 EEEEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtsla.fspdgawlasGsdDgtvriW 37 +cl+t++GH sv +a +s+ +++l+sGs Dg +++W sp|Q8C4J7|TBL3_MOUSE 554 SCLKTFEGHdASVLKVAfVSRGSQLLSSGS-DGLLKLW 590 7********888*****7888888888999.******* PP == domain 11 score: 14.4 bits; conditional E-value: 0.00078 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +c+rtl++H + v++l s+ + ++G+ D + +W+ sp|Q8C4J7|TBL3_MOUSE 596 ECVRTLDAHeDKVWGLHCSQLDDHAITGGSDSRIILWK 633 7********666****99999999999977*******6 PP >> sp|Q6PE01|SNR40_MOUSE U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus OX=10090 GN=Snrnp40 PE=1 SV= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 29.4 0.0 1.4e-08 1.2e-06 4 38 .] 60 95 .. 57 95 .. 0.90 2 ! 22.1 0.1 2.9e-06 0.00025 5 38 .] 104 138 .. 100 138 .. 0.90 3 ! 27.2 0.0 7.2e-08 6.2e-06 3 38 .] 144 181 .. 142 181 .. 0.85 4 ! 14.6 0.1 0.00068 0.058 13 38 .] 197 222 .. 187 222 .. 0.87 5 ! 29.3 0.0 1.6e-08 1.3e-06 2 38 .] 227 264 .. 225 264 .. 0.90 6 ! 24.9 0.1 3.7e-07 3.1e-05 2 38 .] 273 314 .. 272 314 .. 0.85 7 ! 19.8 0.0 1.5e-05 0.0013 3 34 .. 320 352 .. 318 354 .. 0.87 Alignments for each domain: == domain 1 score: 29.4 bits; conditional E-value: 1.4e-08 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + l+GH + v++++f+p+g+ las++ D+ + +W+ sp|Q6PE01|SNR40_MOUSE 60 IMLLSGHeGEVYCCKFHPNGSTLASAGFDRLILLWN 95 56689**888**************9988*******8 PP == domain 2 score: 22.1 bits; conditional E-value: 2.9e-06 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 tl+GH + v l ++ dg++l+s+s D+tv +Wd sp|Q6PE01|SNR40_MOUSE 104 ATLKGHsGAVMELHYNTDGSMLFSASTDKTVAVWD 138 699***555****************99*******9 PP == domain 3 score: 27.2 bits; conditional E-value: 7.2e-08 EEEEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 ++ l+GH s+v+s+ + g+ l+ +GsdDgtv++Wd sp|Q6PE01|SNR40_MOUSE 144 RVKRLKGHtSFVNSCYPARRGPQLVcTGSDDGTVKLWD 181 57889***888****9888888876489*********9 PP == domain 4 score: 14.6 bits; conditional E-value: 0.00068 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 v ++ f++ ++ ++sG+ D+ +++Wd sp|Q6PE01|SNR40_MOUSE 197 VLAVTFNDTSDQIISGGIDNDIKVWD 222 88999********************9 PP == domain 5 score: 29.3 bits; conditional E-value: 1.6e-08 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++++t +GH +svt+l+ s++g++l+s +D+tvr+Wd sp|Q6PE01|SNR40_MOUSE 227 KLTYTMRGHaDSVTGLSLSSEGSYLLSNAMDNTVRVWD 264 5678889**988**************8778*******9 PP == domain 6 score: 24.9 bits; conditional E-value: 3.7e-07 EEEEEEESS..SS...EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH..ss...vtslafspdgawlasGsdDgtvriWd 38 +c++++ G ++ +++spdg+ +a+Gs D+ v++Wd sp|Q6PE01|SNR40_MOUSE 273 RCVKIFQGNvhNFeknLLRCSWSPDGSKIAAGSADRFVYVWD 314 799999988544466777888********************9 PP == domain 7 score: 19.8 bits; conditional E-value: 1.5e-05 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtv 34 l++l GH +s++ +af+pd + ++s+s D+ + sp|Q6PE01|SNR40_MOUSE 320 VLYKLPGHaGSINEVAFHPDEPIILSASSDKRL 352 578899**999*************999779987 PP >> sp|P68040|RACK1_MOUSE Receptor of activated protein C kinase 1 OS=Mus musculus OX=10090 GN=Rack1 PE=1 SV=3 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 18.5 0.0 3.9e-05 0.0033 4 38 .] 8 44 .. 5 44 .. 0.87 2 ! 35.7 0.6 1.4e-10 1.2e-08 3 38 .] 55 91 .. 53 91 .. 0.93 3 ! 36.1 0.2 1.1e-10 9.2e-09 3 38 .] 97 133 .. 95 133 .. 0.93 4 ! 24.3 1.0 5.7e-07 4.8e-05 9 38 .] 146 178 .. 136 178 .. 0.83 5 ! 23.9 0.2 7.5e-07 6.4e-05 7 38 .] 188 220 .. 182 220 .. 0.86 6 ! 22.8 0.1 1.8e-06 0.00015 2 38 .] 225 260 .. 224 260 .. 0.87 7 ! 18.4 0.0 4.3e-05 0.0037 13 37 .. 286 310 .. 273 311 .. 0.90 Alignments for each domain: == domain 1 score: 18.5 bits; conditional E-value: 3.9e-05 EEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtsla.fspdgawlasGsdDgtvriWd 38 +tl+GH ++vt +a +++ ++++s+s+D+t+ +W+ sp|P68040|RACK1_MOUSE 8 RGTLKGHnGWVTQIAtTPQFPDMILSASRDKTIIMWK 44 5799***666****99888888899***********6 PP == domain 2 score: 35.7 bits; conditional E-value: 1.4e-10 EEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 ++r l+GHs+ v+++ s+dg++ +sGs+Dgt+r+Wd sp|P68040|RACK1_MOUSE 55 PQRALRGHSHfVSDVVISSDGQFALSGSWDGTLRLWD 91 7899****667************99***********9 PP == domain 3 score: 36.1 bits; conditional E-value: 1.1e-10 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++r + GH ++v s+afs+d++ ++sGs+D+t+++W+ sp|P68040|RACK1_MOUSE 97 TTRRFVGHtKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133 678899******************************8 PP == domain 4 score: 24.3 bits; conditional E-value: 5.7e-07 SS.SSEEEEEEETTSSE..EEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgaw..lasGsdDgtvriWd 38 H +v++++fsp+++ ++s+++D+ v++W+ sp|P68040|RACK1_MOUSE 146 SHsEWVSCVRFSPNSSNpiIVSCGWDKLVKVWN 178 79666*************989***********8 PP == domain 5 score: 23.9 bits; conditional E-value: 7.5e-07 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 GH + + + +spdg++ asG++Dg ++Wd sp|P68040|RACK1_MOUSE 188 HIGHtGYLNTVTVSPDGSLCASGGKDGQAMLWD 220 3499666*************************9 PP == domain 6 score: 22.8 bits; conditional E-value: 1.8e-06 EEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 ++l+tl+G + +++l+fsp+ wl++++ ++++iWd sp|P68040|RACK1_MOUSE 225 KHLYTLDGG-DiINALCFSPNRYWLCAAT-GPSIKIWD 260 778888887.448************9888.*******9 PP == domain 7 score: 18.4 bits; conditional E-value: 4.3e-05 EEEEEEETTSSEEEEEETTSEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriW 37 tsla+s dg+ l++G D+ vr+W sp|P68040|RACK1_MOUSE 286 CTSLAWSADGQTLFAGYTDNLVRVW 310 59**************88******* PP >> sp|Q8BG40|KTNB1_MOUSE Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus OX=10090 GN=Katnb1 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 14.7 0.1 0.00062 0.053 4 38 .] 13 49 .. 10 49 .. 0.88 2 ! 24.3 0.0 5.7e-07 4.9e-05 2 38 .] 54 91 .. 53 91 .. 0.93 3 ! 36.3 0.0 9.2e-11 7.9e-09 3 38 .] 97 133 .. 95 133 .. 0.93 4 ! 45.8 0.2 9.1e-14 7.8e-12 3 38 .] 139 175 .. 137 175 .. 0.93 5 ! 31.0 0.0 4.5e-09 3.8e-07 2 38 .] 180 217 .. 179 217 .. 0.92 6 ? 10.7 0.0 0.011 0.98 7 37 .. 227 257 .. 221 259 .. 0.82 Alignments for each domain: == domain 1 score: 14.7 bits; conditional E-value: 0.00062 EEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtsla.fspdgawlasGsdDgtvriWd 38 l+++ +H s+v+sl +g++la+G+dD+ v +W+ sp|Q8BG40|KTNB1_MOUSE 13 LQEIVAHaSNVSSLVlGKASGRLLATGGDDCRVNLWS 49 5667799888*999999999****************5 PP == domain 2 score: 24.3 bits; conditional E-value: 5.7e-07 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +c+ +ltGH s+v s++ + ++++Gs g++r+Wd sp|Q8BG40|KTNB1_MOUSE 54 NCIMSLTGHtSPVESVRLNTPEELIVAGSQSGSIRVWD 91 79*******999****98888888999**********9 PP == domain 3 score: 36.3 bits; conditional E-value: 9.2e-11 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 lrtl GH +++sl+f+p+g ++asGs D ++++Wd sp|Q8BG40|KTNB1_MOUSE 97 ILRTLMGHkANICSLDFHPYGEFVASGSQDTNIKLWD 133 689999**666*************************9 PP == domain 4 score: 45.8 bits; conditional E-value: 9.1e-14 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 c+ ++GH + v++l+fspdg+wlas+ dD+tv++Wd sp|Q8BG40|KTNB1_MOUSE 139 CVFRYRGHsQAVRCLRFSPDGKWLASAADDHTVKLWD 175 8889****666****************9********9 PP == domain 5 score: 31.0 bits; conditional E-value: 4.5e-09 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + + ++ GH ++v+ + f+p+ +lasGs D+t+r+Wd sp|Q8BG40|KTNB1_MOUSE 180 KMMSEFPGHtGPVNVVEFHPNEYLLASGSSDRTIRFWD 217 567889***888****************99*******9 PP == domain 6 score: 10.7 bits; conditional E-value: 0.011 EESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriW 37 ++G ++v+s+ f+pdg l sG+ ++r++ sp|Q8BG40|KTNB1_MOUSE 227 IEGEpGPVRSVLFNPDGCCLYSGC-QDSLRVY 257 5667677*****************.8888875 PP >> sp|Q8VBV4|FBXW7_MOUSE F-box/WD repeat-containing protein 7 OS=Mus musculus OX=10090 GN=Fbxw7 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 26.9 0.4 8.5e-08 7.3e-06 5 38 .] 377 410 .. 373 410 .. 0.83 2 ! 22.4 0.7 2.3e-06 0.00019 1 38 [] 414 450 .. 414 450 .. 0.78 3 ! 26.2 0.5 1.4e-07 1.2e-05 1 38 [] 454 490 .. 454 490 .. 0.87 4 ! 24.8 0.1 3.9e-07 3.4e-05 1 38 [] 494 530 .. 494 530 .. 0.95 5 ! 30.4 0.6 6.6e-09 5.7e-07 2 38 .] 535 570 .. 534 570 .. 0.94 6 ! 20.9 0.3 7e-06 0.0006 1 38 [] 574 610 .. 574 610 .. 0.76 7 ! 31.3 0.1 3.5e-09 3e-07 1 38 [] 614 653 .. 614 653 .. 0.87 Alignments for each domain: == domain 1 score: 26.9 bits; conditional E-value: 8.5e-08 EEEESS.SS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ss.vtslafspdgawlasGsdDgtvriWd 38 ++l+GH ++ +t+l + g+ ++sGsdD+t+++W+ sp|Q8VBV4|FBXW7_MOUSE 377 KVLKGHdDHvITCL--QFCGNRIVSGSDDNTLKVWS 410 689***66677***..66777799***********5 PP == domain 2 score: 22.4 bits; conditional E-value: 2.3e-06 TEEEEEEESS.SSE.EEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssv.tslafspdgawlasGsdDgtvriWd 38 g+clrtl GH ++v +s+ +d+ ++sGs D+t+++W+ sp|Q8VBV4|FBXW7_MOUSE 414 GKCLRTLVGHtGGVwSSQ--MRDNI-IISGSTDRTLKVWN 450 79********888*4444..33333.679**********8 PP == domain 3 score: 26.2 bits; conditional E-value: 1.4e-07 TEEEEEEESS.SSEEEEEEETTSSE....EEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgaw....lasGsdDgtvriWd 38 g+c++tl GH s v+++ ++ ++sGs+D t+r+Wd sp|Q8VBV4|FBXW7_MOUSE 454 GECIHTLYGHtSTVRCM------HLhekrVVSGSRDATLRVWD 490 69********777****......55555589***********9 PP == domain 4 score: 24.8 bits; conditional E-value: 3.9e-07 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 gqcl++l GH v+++ + dg+ ++sG +D v++Wd sp|Q8VBV4|FBXW7_MOUSE 494 GQCLHVLMGHvAAVRCV--QYDGRRVVSGAYDFMVKVWD 530 79********999****..889999****99*******9 PP == domain 5 score: 30.4 bits; conditional E-value: 6.6e-09 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +cl+tl GH + v+sl + dg ++sGs D ++r+Wd sp|Q8VBV4|FBXW7_MOUSE 535 TCLHTLQGHtNRVYSL--QFDGIHVVSGSLDTSIRVWD 570 7********999****..889999*************9 PP == domain 6 score: 20.9 bits; conditional E-value: 7e-06 TEEEEEEESSSSEE...EEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGHssvt...slafspdgawlasGsdDgtvriWd 38 g+c++tltGH+s t l + l+sG D tv+iWd sp|Q8VBV4|FBXW7_MOUSE 574 GNCIHTLTGHQSLTsgmEL----KDNILVSGNADSTVKIWD 610 79********888543322....3333899*88*******9 PP == domain 7 score: 31.3 bits; conditional E-value: 3.5e-09 TEEEEEEESS.SS...EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ss...vtslafspdgawlasGsdDgtvriWd 38 gqcl+tl G ++ vt+l + ++++++++sdDgtv++Wd sp|Q8VBV4|FBXW7_MOUSE 614 GQCLQTLQGPsKHqsaVTCL--QFNKNFVITSSDDGTVKLWD 653 79****9866544567****..8899***************9 PP >> sp|Q99KN2|CIAO1_MOUSE Probable cytosolic iron-sulfur protein assembly protein CIAO1 OS=Mus musculus OX=10090 GN=Ciao # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 24.0 0.2 7.2e-07 6.1e-05 8 37 .. 12 43 .. 6 43 .. 0.84 2 ! 22.2 0.5 2.7e-06 0.00023 4 38 .] 53 89 .. 50 89 .. 0.85 3 ! 37.0 0.1 5.5e-11 4.7e-09 2 37 .. 96 132 .. 95 133 .. 0.96 4 ! 25.6 0.1 2.2e-07 1.9e-05 2 37 .. 141 177 .. 140 178 .. 0.95 5 ! 42.0 0.7 1.4e-12 1.2e-10 2 37 .. 185 221 .. 184 222 .. 0.94 6 ? 8.5 0.3 0.056 4.8 1 37 [. 241 279 .. 241 280 .. 0.74 7 ! 22.4 0.0 2.3e-06 0.0002 5 37 .. 296 331 .. 288 332 .. 0.72 Alignments for each domain: == domain 1 score: 24.0 bits; conditional E-value: 7.2e-07 ESS.SS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 8 tGH.ss.vtslafspdgawlasGsdDgtvriW 37 +H +s + la++p+g++las++ D+++riW sp|Q99KN2|CIAO1_MOUSE 12 PAHpDSrCWFLAWNPSGTLLASCGGDRKIRIW 43 5887445999***********9877******* PP == domain 2 score: 22.2 bits; conditional E-value: 2.7e-06 EEEEE.SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtlt.GH.ssvtslafspdgawlasGsdDgtvriWd 38 +l+ GH v+ +a+sp g++las+s D t iW+ sp|Q99KN2|CIAO1_MOUSE 53 KSVLSeGHqRTVRKVAWSPCGNYLASASFDATTCIWK 89 556655**555****************99*******6 PP == domain 3 score: 37.0 bits; conditional E-value: 5.5e-11 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +c++tl+GH + v s+a+ p+g++la++s+D++v +W sp|Q99KN2|CIAO1_MOUSE 96 ECVTTLEGHeNEVKSVAWAPSGNLLATCSRDKSVWVW 132 8********999************************* PP == domain 4 score: 25.6 bits; conditional E-value: 2.2e-07 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +c+ +l+ H ++v ++ ++p++ +las+s+D tv+++ sp|Q99KN2|CIAO1_MOUSE 141 ECVSVLSSHtQDVKHVVWHPSQELLASASYDDTVKLY 177 79*******999***********************98 PP == domain 5 score: 42.0 bits; conditional E-value: 1.4e-12 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 c tl+GH s v+s+af+p+g+ las+sdD+tvriW sp|Q99KN2|CIAO1_MOUSE 185 VCCATLEGHeSTVWSIAFDPSGQRLASCSDDRTVRIW 221 6889*****888************************* PP == domain 6 score: 8.5 bits; conditional E-value: 0.056 TEEEEEEESS.SS.EEEEEEETTSSE......EEEE.ETTSEEEEE CS WD40 1 gqclrtltGH.ss.vtslafspdgaw......lasG.sdDgtvriW 37 ++c+ tl+G + ++++ aw la++ + D +r++ sp|Q99KN2|CIAO1_MOUSE 241 WKCICTLSGFhTRtIYDV------AWcqltgaLATAcG-DDAIRVF 279 68999**9774447****......77666666775516.*999996 PP == domain 7 score: 22.4 bits; conditional E-value: 2.3e-06 EEEE.SS.SSEEEEEEETTSSEE.EEEETTSEEEEE CS WD40 5 rtlt.GH.ssvtslafspdgawl.asGsdDgtvriW 37 +l+ +H ++v+++a++p + l as+sdDg v +W sp|Q99KN2|CIAO1_MOUSE 296 AHLRqAHsQDVNCVAWNPKEPGLlASCSDDGEVAFW 331 3333466666****9999999962699******999 PP >> sp|P62874|GBB1_MOUSE Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Mus musculus OX=10090 GN=Gn # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 24.6 0.0 4.6e-07 3.9e-05 4 38 .] 48 83 .. 45 83 .. 0.94 2 ! 13.3 0.1 0.0017 0.15 12 38 .] 99 125 .. 86 125 .. 0.86 3 ! 18.8 0.2 3.1e-05 0.0027 5 38 .] 137 170 .. 133 170 .. 0.90 4 ! 24.8 0.1 4e-07 3.4e-05 1 38 [] 174 212 .. 174 212 .. 0.94 5 ! 35.1 0.0 2.2e-10 1.9e-08 2 38 .] 217 254 .. 216 254 .. 0.95 6 ! 24.0 0.2 7e-07 6e-05 3 38 .] 260 298 .. 258 298 .. 0.85 7 ! 20.3 0.5 1.1e-05 0.00093 6 38 .] 307 340 .] 304 340 .] 0.93 Alignments for each domain: == domain 1 score: 24.6 bits; conditional E-value: 4.6e-07 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 rtl+GH ++++ + d+++l+s+s Dg++ iWd sp|P62874|GBB1_MOUSE 48 RRTLRGHlAKIYAMHWGTDSRLLVSASQDGKLIIWD 83 689****999*************************9 PP == domain 2 score: 13.3 bits; conditional E-value: 0.0017 SEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriWd 38 +v +a+ p+g+++a+G+ D+ + i++ sp|P62874|GBB1_MOUSE 99 WVMTCAYAPSGNYVACGGLDNICSIYN 125 488889*******************97 PP == domain 3 score: 18.8 bits; conditional E-value: 3.1e-05 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 r+l GH + ++++f +d++ ++s++ D t+ +Wd sp|P62874|GBB1_MOUSE 137 RELAGHtGYLSCCRFLDDNQIVTSSG-DTTCALWD 170 7899**666*************9989.*******9 PP == domain 4 score: 24.8 bits; conditional E-value: 4e-07 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 gq+++t+tGH ++v sl+ pd ++++sG D + ++Wd sp|P62874|GBB1_MOUSE 174 GQQTTTFTGHtGDVMSLSLAPDTRLFVSGACDASAKLWD 212 68899*****888****************77*******9 PP == domain 5 score: 35.1 bits; conditional E-value: 2.2e-10 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 c +t+tGH s++++++f p+g+ +a+GsdD t+r++d sp|P62874|GBB1_MOUSE 217 MCRQTFTGHeSDINAICFFPNGNAFATGSDDATCRLFD 254 5899*****999************************98 PP == domain 6 score: 24.0 bits; conditional E-value: 7e-07 EEEEEESS.SS...EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ss...vtslafspdgawlasGsdDgtvriWd 38 l t++ H + +ts++fs++g++l++G dD ++ +Wd sp|P62874|GBB1_MOUSE 260 ELMTYS-HdNIicgITSVSFSKSGRLLLAGYDDFNCNVWD 298 577775.85336669************************9 PP == domain 7 score: 20.3 bits; conditional E-value: 1.1e-05 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +l GH + v++l + +dg +a+Gs+D ++iW+ sp|P62874|GBB1_MOUSE 307 VLAGHdNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 688**888*************************8 PP >> sp|P97499|TEP1_MOUSE Telomerase protein component 1 OS=Mus musculus OX=10090 GN=Tep1 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 5.9 0.0 0.38 32 13 36 .. 1686 1709 .. 1668 1711 .. 0.79 2 ? 9.2 0.0 0.035 3 8 38 .] 1723 1752 .. 1716 1752 .. 0.87 3 ! 11.4 0.1 0.007 0.6 8 38 .] 1763 1794 .. 1757 1794 .. 0.87 4 ! 14.4 0.0 0.00078 0.067 9 34 .. 1805 1831 .. 1798 1835 .. 0.85 5 ? 10.4 0.0 0.015 1.2 12 37 .. 1850 1876 .. 1839 1876 .. 0.84 6 ? 3.4 0.0 2.4 2e+02 8 38 .] 1888 1919 .. 1881 1919 .. 0.80 7 ? 3.9 0.0 1.6 1.4e+02 23 37 .. 2030 2044 .. 2011 2044 .. 0.84 8 ! 28.8 0.1 2.1e-08 1.8e-06 3 38 .] 2061 2097 .. 2059 2097 .. 0.94 9 ! 16.0 4.4 0.00025 0.021 4 38 .] 2107 2142 .. 2105 2142 .. 0.88 10 ! 16.4 0.1 0.00018 0.016 1 38 [] 2146 2182 .. 2146 2182 .. 0.71 11 ? 1.8 0.0 7.4 6.3e+02 4 37 .. 2188 2231 .. 2185 2232 .. 0.78 12 ! 12.4 0.0 0.0033 0.28 4 37 .. 2239 2272 .. 2237 2273 .. 0.87 13 ? 7.4 0.0 0.12 11 13 37 .. 2290 2314 .. 2280 2315 .. 0.78 14 ? 7.8 0.0 0.097 8.3 10 37 .. 2556 2582 .. 2550 2583 .. 0.75 Alignments for each domain: == domain 1 score: 5.9 bits; conditional E-value: 0.38 EEEEEEETTSSEEEEEETTSEEEE CS WD40 13 vtslafspdgawlasGsdDgtvri 36 t++afsp+g+ a G+ gt+++ sp|P97499|TEP1_MOUSE 1686 PTAVAFSPNGQRAAVGTASGTIYL 1709 689*********999*99999976 PP == domain 2 score: 9.2 bits; conditional E-value: 0.035 ESSSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGHssvtslafspdgawlasGsdDgtvriWd 38 +G ++++s+af +d a++++ Dg++ +Wd sp|P97499|TEP1_MOUSE 1723 SGCDGISSFAFLSDTALFLTTF-DGHLELWD 1752 566669*************999.*******9 PP == domain 3 score: 11.4 bits; conditional E-value: 0.007 ESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGHss.vtslafspdgawlasGsdDgtvriWd 38 ++H+ +t+++ spd ++la+ + g +++Wd sp|P97499|TEP1_MOUSE 1763 KAHQYqITGCCLSPDRRLLATVCLGGYLKLWD 1794 689446**************9899*******9 PP == domain 4 score: 14.4 bits; conditional E-value: 0.00078 SS.SSEEEEEEETTSSEEEEEETTSEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtv 34 +H +s +++af+p+g+ +a+Gs+ g++ sp|P97499|TEP1_MOUSE 1805 THpKSLNCVAFHPEGQVVATGSWAGSI 1831 59999*****************97776 PP == domain 5 score: 10.4 bits; conditional E-value: 0.015 S.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 12 s.vtslafspdgawlasGsdDgtvriW 37 + v+slaf++ g+ +a G Dgtv +W sp|P97499|TEP1_MOUSE 1850 PsVCSLAFNKPGKIVAVGRIDGTVELW 1876 34**************9999******* PP == domain 6 score: 3.4 bits; conditional E-value: 2.4 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++ ++v+++ f + g+ ++++++Dg+ +W+ sp|P97499|TEP1_MOUSE 1888 PAQcGCVSAVLFLHAGDRFLTAGEDGKAQLWS 1919 556455888999999999999999*******5 PP == domain 7 score: 3.9 bits; conditional E-value: 1.6 SEEEEEETTSEEEEE CS WD40 23 awlasGsdDgtvriW 37 ++a++s+D tvr+W sp|P97499|TEP1_MOUSE 2030 ELMAAASEDFTVRLW 2044 457889********* PP == domain 8 score: 28.8 bits; conditional E-value: 2.1e-08 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 c +l+GH ++v++++fspdg la++++D+++ Wd sp|P97499|TEP1_MOUSE 2061 CCAELRGHeGPVCCCSFSPDGGILATAGRDRNLLCWD 2097 66789***999*************************9 PP == domain 9 score: 16.0 bits; conditional E-value: 0.00025 EEEEE.SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtlt.GH.ssvtslafspdgawlasGsdDgtvriWd 38 ++t++ H +++t++a+ +d+ +++++s Dg+v +W+ sp|P97499|TEP1_MOUSE 2107 IHTFSsCHrDWITGCAWTKDNILVSCSS-DGSVGLWN 2142 78886699999************97666.*******8 PP == domain 10 score: 16.4 bits; conditional E-value: 0.00018 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 gq+l+ ++GH s v+++ + ++s s+Dgt+++Wd sp|P97499|TEP1_MOUSE 2146 GQQLGQFSGHqSAVSAV-VAV-EEHIVSVSRDGTLKVWD 2182 689999****7666555.111.333567799*******9 PP == domain 11 score: 1.8 bits; conditional E-value: 7.4 EEEEESS.SSEEEEE........EETTSSEEE.EEETTSEEEEE CS WD40 4 lrtltGH.ssvtsla........fspdgawla.sGsdDgtvriW 37 l+++ +H ++++ +a +p + +l+ + + Dg ++W sp|P97499|TEP1_MOUSE 2188 LTSIPAHsGPISQCAaaleprpgGQPGSELLVvTVGLDGATKLW 2231 677889*777955556999*99999999998635577******* PP == domain 12 score: 12.4 bits; conditional E-value: 0.0033 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +rtl GH ++vt+ a s + +l++++ D +v +W sp|P97499|TEP1_MOUSE 2239 IRTLQGHsGPVTAAAASEASGLLLTSD-DSSVQLW 2272 79*****777****9999999999866.******* PP == domain 13 score: 7.4 bits; conditional E-value: 0.12 EEEEEEETTSSEEEEEETTSEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriW 37 +t++a+ pdg++++sG + g + +W sp|P97499|TEP1_MOUSE 2290 ITAVAWAPDGSMVVSGNEAGELTLW 2314 8**************9765555555 PP == domain 14 score: 7.8 bits; conditional E-value: 0.097 S.SSEEEEEEETTSSE....EEEEETTSEEEEE CS WD40 10 H.ssvtslafspdgaw....lasGsdDgtvriW 37 H +svt+l + l+++s+D+ v++W sp|P97499|TEP1_MOUSE 2556 HlGSVTAL------HVlpglLVTASKDRDVKLW 2582 77779988......44444489*********** PP >> sp|O88342|WDR1_MOUSE WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=3 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.6 0.0 0.025 2.2 7 38 .] 54 86 .. 51 86 .. 0.81 2 ? 10.3 0.0 0.015 1.3 3 32 .. 138 169 .. 136 173 .. 0.81 3 ! 24.8 0.0 3.9e-07 3.3e-05 7 38 .] 185 217 .. 179 217 .. 0.86 4 ! 25.6 0.8 2.2e-07 1.9e-05 8 38 .] 231 262 .. 225 262 .. 0.89 5 ! 22.2 0.7 2.7e-06 0.00023 2 38 .] 311 350 .. 310 350 .. 0.90 6 ? 9.1 0.0 0.035 3 6 35 .. 360 389 .. 355 390 .. 0.84 7 ! 11.4 0.0 0.0066 0.57 16 37 .. 451 472 .. 437 473 .. 0.88 8 ? 9.6 0.0 0.025 2.2 11 32 .. 490 511 .. 482 517 .. 0.80 9 ! 26.6 0.1 1e-07 9e-06 6 37 .. 527 559 .. 523 560 .. 0.89 10 ? 8.9 0.3 0.041 3.5 8 37 .. 572 602 .. 565 603 .. 0.81 Alignments for each domain: == domain 1 score: 9.6 bits; conditional E-value: 0.025 EESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGHss.vtslafspdgawlasGsdDgtvriWd 38 +t H + v ++ p+g ++asG+ g++riWd sp|O88342|WDR1_MOUSE 54 YTEHAHqVVVAKYAPSGFYIASGDISGKLRIWD 86 66663346566799********999*******9 PP == domain 2 score: 10.3 bits; conditional E-value: 0.015 EEEEEESSSS.EEEEEEETTSSE.EEEEETTS CS WD40 3 clrtltGHss.vtslafspdgaw.lasGsdDg 32 ++++tGH+ ++s++ + ++ la+GsdD+ sp|O88342|WDR1_MOUSE 138 SVGEITGHNKvINSVDIKQTRPYrLATGSDDN 169 67889***6647***8888888899****886 PP == domain 3 score: 24.8 bits; conditional E-value: 3.9e-07 EESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGHss.vtslafspdgawlasGsdDgtvriWd 38 + Hs v++++fspdg+ +a++s Dg + i+d sp|O88342|WDR1_MOUSE 185 IGDHSRfVNCVRFSPDGNRFATASADGQIFIYD 217 5579445************************98 PP == domain 4 score: 25.6 bits; conditional E-value: 2.2e-07 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++H ++++++++spd++ l+s+s D+t +iWd sp|O88342|WDR1_MOUSE 231 KAHdGGIYAISWSPDSTHLLSASGDKTSKIWD 262 79*777*************99988*******9 PP == domain 5 score: 22.2 bits; conditional E-value: 2.7e-06 EEEEEEESS.SSEEEEEEETTSSE..EEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw..lasGsdDgtvriWd 38 ++lr+++GH +s+ +l ++++g + sGs Dg++ Wd sp|O88342|WDR1_MOUSE 311 KPLRVIKGHsKSIQCLTVHRNGGKsyIYSGSHDGHINYWD 350 799******999*****88888887799**99*******9 PP == domain 6 score: 9.1 bits; conditional E-value: 0.035 EEESS.SSEEEEEEETTSSEEEEEETTSEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvr 35 + +GH + v+ + ++ + +++ s+s+D tvr sp|O88342|WDR1_MOUSE 360 SGKGHtNQVSRMTVNESEQLV-SCSMDDTVR 389 457**888****999999997.7898***98 PP == domain 7 score: 11.4 bits; conditional E-value: 0.0066 EEEETTSSEEEEEETTSEEEEE CS WD40 16 lafspdgawlasGsdDgtvriW 37 +a++p g+ +a G+ Dg+vr++ sp|O88342|WDR1_MOUSE 451 VAVHPGGDTVAVGGTDGNVRVY 472 457**********99*****98 PP == domain 8 score: 9.6 bits; conditional E-value: 0.025 SSEEEEEEETTSSEEEEEETTS CS WD40 11 ssvtslafspdgawlasGsdDg 32 ++vt++a+s+dga+la ++ + sp|O88342|WDR1_MOUSE 490 GPVTDVAYSHDGAFLAVCDASK 511 45*************9986555 PP == domain 9 score: 26.6 bits; conditional E-value: 1e-07 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriW 37 ++ GH + +la+spd+ +asG++D v++W sp|O88342|WDR1_MOUSE 527 VFYGHhAKIVCLAWSPDNEHFASGGMDMMVYVW 559 6789966699*********************** PP == domain 10 score: 8.9 bits; conditional E-value: 0.041 ESS..SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 8 tGH..ssvtslafspdgawlasGsdDgtvriW 37 ++H +v+sla+ ++++++++++ D +v+ W sp|O88342|WDR1_MOUSE 572 DAHrlHHVSSLAWLDEHTLVTTSH-DASVKEW 602 5666446************99989.****977 PP >> sp|P29387|GBB4_MOUSE Guanine nucleotide-binding protein subunit beta-4 OS=Mus musculus OX=10090 GN=Gnb4 PE=1 SV=4 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 24.1 0.0 6.8e-07 5.9e-05 4 38 .] 48 83 .. 45 83 .. 0.94 2 ! 13.1 0.0 0.002 0.17 12 38 .] 99 125 .. 89 125 .. 0.88 3 ! 21.2 0.2 5.4e-06 0.00047 4 38 .] 136 170 .. 133 170 .. 0.90 4 ! 23.6 0.2 9.3e-07 8e-05 1 38 [] 174 212 .. 174 212 .. 0.93 5 ! 30.1 0.1 8.5e-09 7.3e-07 3 38 .] 218 254 .. 216 254 .. 0.95 6 ! 23.2 0.1 1.3e-06 0.00011 9 38 .] 265 298 .. 259 298 .. 0.85 7 ! 21.0 0.8 6.2e-06 0.00054 5 38 .] 306 340 .] 302 340 .] 0.92 Alignments for each domain: == domain 1 score: 24.1 bits; conditional E-value: 6.8e-07 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 rtl+GH ++++ + d+++l+s+s Dg++ iWd sp|P29387|GBB4_MOUSE 48 RRTLRGHlAKIYAMHWGYDSRLLVSASQDGKLIIWD 83 689****999*************************9 PP == domain 2 score: 13.1 bits; conditional E-value: 0.002 SEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriWd 38 +v +a+ p+g+++a+G+ D+ + i++ sp|P29387|GBB4_MOUSE 99 WVMTCAYAPSGNYVACGGLDNICSIYN 125 487889*******************97 PP == domain 3 score: 21.2 bits; conditional E-value: 5.4e-06 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 r+l GH + ++++f +dg+ ++s++ D t+ +Wd sp|P29387|GBB4_MOUSE 136 SRELPGHtGYLSCCRFLDDGQIITSSG-DTTCALWD 170 57899**666*************9999.*******9 PP == domain 4 score: 23.6 bits; conditional E-value: 9.3e-07 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 gq+++t+tGH ++v sl+ spd + ++sG D + ++Wd sp|P29387|GBB4_MOUSE 174 GQQTTTFTGHsGDVMSLSLSPDLKTFVSGACDASSKLWD 212 68899*****777****************77*******9 PP == domain 5 score: 30.1 bits; conditional E-value: 8.5e-09 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 c +++tGH s++++++f p+g +a+GsdD t+r++d sp|P29387|GBB4_MOUSE 218 CRQSFTGHiSDINAVSFFPSGYAFATGSDDATCRLFD 254 889********************************98 PP == domain 6 score: 23.2 bits; conditional E-value: 1.3e-06 SS.SS...EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ss...vtslafspdgawlasGsdDgtvriWd 38 H + +ts+afs++g++l++G dD ++ +Wd sp|P29387|GBB4_MOUSE 265 SHdNIicgITSVAFSKSGRLLLAGYDDFNCSVWD 298 574336669************************9 PP == domain 7 score: 21.0 bits; conditional E-value: 6.2e-06 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++l GH + v++l + +dg +a+Gs+D +riW+ sp|P29387|GBB4_MOUSE 306 GVLAGHdNRVSCLGVTDDGMAVATGSWDSFLRIWN 340 5788**888*************************8 PP >> sp|Q9ERF3|WDR61_MOUSE WD repeat-containing protein 61 OS=Mus musculus OX=10090 GN=Wdr61 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 13.5 0.0 0.0015 0.13 9 38 .] 14 48 .. 4 48 .. 0.83 2 ! 19.4 0.2 2e-05 0.0017 2 38 .] 55 92 .. 54 92 .. 0.91 3 ? 10.0 0.0 0.02 1.7 14 29 .. 110 125 .. 96 132 .. 0.82 4 ! 20.1 0.0 1.2e-05 0.001 11 38 .] 149 176 .. 138 176 .. 0.84 5 ! 38.0 0.0 2.8e-11 2.4e-09 1 38 [] 180 218 .. 180 218 .. 0.96 6 ! 30.7 1.5 5.5e-09 4.7e-07 5 38 .] 226 260 .. 222 260 .. 0.92 7 ! 17.8 0.7 6.3e-05 0.0054 2 38 .] 265 302 .. 264 302 .. 0.92 Alignments for each domain: == domain 1 score: 13.5 bits; conditional E-value: 0.0015 SS.SSEEEEEEETTSSE....EEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgaw....lasGsdDgtvriWd 38 +H + ++s+a+ +++ +++Gs D v++W+ sp|Q9ERF3|WDR61_MOUSE 14 AHdDAIWSVAWETNKKEnietVVTGSLDDLVKVWK 48 89555****66666666*9**99***********6 PP == domain 2 score: 19.4 bits; conditional E-value: 2e-05 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++++l+GH +v s++ s+ + as+s D ++r+Wd sp|Q9ERF3|WDR61_MOUSE 55 ELQWSLEGHqLGVVSVDISHTLPIAASSSLDAHIRLWD 92 57899****76699**********99999********9 PP == domain 3 score: 10.0 bits; conditional E-value: 0.02 EEEEEETTSSEEEEEE CS WD40 14 tslafspdgawlasGs 29 + lafspd+++la+G+ sp|Q9ERF3|WDR61_MOUSE 110 WTLAFSPDSQYLATGT 125 789***********95 PP == domain 4 score: 20.1 bits; conditional E-value: 1.2e-05 SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriWd 38 +++ s+a+spdg++lasG Dg + i+d sp|Q9ERF3|WDR61_MOUSE 149 KFILSIAYSPDGKYLASGAIDGIINIFD 176 5799**********************98 PP == domain 5 score: 38.0 bits; conditional E-value: 2.8e-11 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g++l+tl+GH +++sl fspd+++l+++sdDg ++i+d sp|Q9ERF3|WDR61_MOUSE 180 GKLLHTLEGHaMPIRSLTFSPDSQLLVTASDDGYIKIYD 218 689*******888*************************8 PP == domain 6 score: 30.7 bits; conditional E-value: 5.5e-09 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +tl+GH s+v +af+pd + ++s+s D++v++Wd sp|Q9ERF3|WDR61_MOUSE 226 GTLSGHaSWVLNVAFCPDDTHFVSSSSDKSVKVWD 260 79****999*************99877*******9 PP == domain 7 score: 17.8 bits; conditional E-value: 6.3e-05 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +c++t+ H + v++++++ +g+ ++s +dD+ ++++d sp|Q9ERF3|WDR61_MOUSE 265 TCIHTFFDHqDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302 79***999*666**************9999******98 PP >> sp|P62880|GBB2_MOUSE Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Mus musculus OX=10090 GN=Gn # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 24.6 0.0 4.6e-07 3.9e-05 4 38 .] 48 83 .. 45 83 .. 0.94 2 ! 12.3 0.1 0.0036 0.31 12 37 .. 99 124 .. 86 125 .. 0.85 3 ! 19.8 0.2 1.5e-05 0.0013 4 38 .] 136 170 .. 133 170 .. 0.90 4 ! 23.7 0.1 8.7e-07 7.5e-05 7 38 .] 180 212 .. 174 212 .. 0.87 5 ! 28.7 0.0 2.4e-08 2e-06 3 38 .] 218 254 .. 216 254 .. 0.96 6 ! 23.9 0.1 7.5e-07 6.4e-05 10 38 .] 266 298 .. 259 298 .. 0.84 7 ! 20.4 0.6 9.6e-06 0.00083 5 38 .] 306 340 .] 302 340 .] 0.92 Alignments for each domain: == domain 1 score: 24.6 bits; conditional E-value: 4.6e-07 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 rtl+GH ++++ + d+++l+s+s Dg++ iWd sp|P62880|GBB2_MOUSE 48 RRTLRGHlAKIYAMHWGTDSRLLVSASQDGKLIIWD 83 689****999*************************9 PP == domain 2 score: 12.3 bits; conditional E-value: 0.0036 SEEEEEEETTSSEEEEEETTSEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriW 37 +v +a+ p+g+++a+G+ D+ + i+ sp|P62880|GBB2_MOUSE 99 WVMTCAYAPSGNFVACGGLDNICSIY 124 488889*****************998 PP == domain 3 score: 19.8 bits; conditional E-value: 1.5e-05 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 r+l GH + ++++f +d++ ++s++ D t+ +Wd sp|P62880|GBB2_MOUSE 136 SRELPGHtGYLSCCRFLDDNQIITSSG-DTTCALWD 170 57899**666*************9999.*******9 PP == domain 4 score: 23.7 bits; conditional E-value: 8.7e-07 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + GH ++v sl+ pdg+ ++sG D ++++Wd sp|P62880|GBB2_MOUSE 180 FAGHsGDVMSLSLAPDGRTFVSGACDASIKLWD 212 78**777****************77*******9 PP == domain 5 score: 28.7 bits; conditional E-value: 2.4e-08 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 c +t+ GH s+++++af p+g +++GsdD t+r++d sp|P62880|GBB2_MOUSE 218 CRQTFIGHeSDINAVAFFPNGYAFTTGSDDATCRLFD 254 8899****999************************98 PP == domain 6 score: 23.9 bits; conditional E-value: 7.5e-07 S.SS...EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 H.ss...vtslafspdgawlasGsdDgtvriWd 38 H + +ts+afs++g++l++G dD ++ iWd sp|P62880|GBB2_MOUSE 266 HdNIicgITSVAFSRSGRLLLAGYDDFNCNIWD 298 74336669************************9 PP == domain 7 score: 20.4 bits; conditional E-value: 9.6e-06 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++l GH + v++l + +dg +a+Gs+D ++iW+ sp|P62880|GBB2_MOUSE 306 GVLAGHdNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 5788**888*************************8 PP >> sp|Q61011|GBB3_MOUSE Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 OS=Mus musculus OX=10090 GN=Gn # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 24.8 0.0 4.1e-07 3.5e-05 4 38 .] 48 83 .. 45 83 .. 0.94 2 ! 12.9 0.0 0.0023 0.2 12 38 .] 99 125 .. 86 125 .. 0.86 3 ! 19.0 0.4 2.7e-05 0.0023 4 38 .] 136 170 .. 133 170 .. 0.90 4 ! 21.8 0.1 3.4e-06 0.0003 2 38 .] 175 212 .. 174 212 .. 0.90 5 ! 33.1 0.1 9.4e-10 8e-08 1 38 [] 216 254 .. 216 254 .. 0.96 6 ! 18.0 0.0 5.8e-05 0.005 12 38 .] 272 298 .. 259 298 .. 0.87 7 ! 23.4 0.4 1.1e-06 9.6e-05 4 38 .] 305 340 .] 302 340 .] 0.93 Alignments for each domain: == domain 1 score: 24.8 bits; conditional E-value: 4.1e-07 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 rtl+GH ++++ + d+++l+s+s Dg++ +Wd sp|Q61011|GBB3_MOUSE 48 RRTLRGHlAKIYAMHWATDSKLLVSASQDGKLIVWD 83 689****999*************************9 PP == domain 2 score: 12.9 bits; conditional E-value: 0.0023 SEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriWd 38 +v +a+ p+g+++a+G+ D+ + i++ sp|Q61011|GBB3_MOUSE 99 WVMTCAYAPSGNFVACGGLDNMCSIYN 125 488889******************997 PP == domain 3 score: 19.0 bits; conditional E-value: 2.7e-05 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 r+l++H + ++++f +d++ ++s++ D t+ +Wd sp|Q61011|GBB3_MOUSE 136 SRELSAHtGYLSCCRFLDDNNIVTSSG-DTTCALWD 170 6899***666*************9989.*******9 PP == domain 4 score: 21.8 bits; conditional E-value: 3.4e-06 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 q+ +++ GH ++ sla+spd ++++sG D + ++Wd sp|Q61011|GBB3_MOUSE 175 QQKTVFVGHtGDCMSLAVSPDYKLFISGACDASAKLWD 212 6677899**88899**************77*******9 PP == domain 5 score: 33.1 bits; conditional E-value: 9.4e-10 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+c +t+tGH s++++++f p+g +++GsdD ++r++d sp|Q61011|GBB3_MOUSE 216 GTCRQTFTGHeSDINAICFFPNGEAICTGSDDASCRLFD 254 6799******999************************98 PP == domain 6 score: 18.0 bits; conditional E-value: 5.8e-05 SEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriWd 38 ++ts+afs +g++l++G dD ++ +Wd sp|Q61011|GBB3_MOUSE 272 GITSVAFSLSGRLLFAGYDDFNCNVWD 298 49************************9 PP == domain 7 score: 23.4 bits; conditional E-value: 1.1e-06 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++l+GH + v++l + dg +a+Gs+D ++iW+ sp|Q61011|GBB3_MOUSE 305 VGILSGHdNRVSCLGVTADGMAVATGSWDSFLKIWN 340 789****888*************************8 PP >> sp|Q9D0I6|WSDU1_MOUSE WD repeat, SAM and U-box domain-containing protein 1 OS=Mus musculus OX=10090 GN=Wdsub1 PE=2 S # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 18.6 0.1 3.7e-05 0.0032 3 37 .. 4 37 .. 2 38 .. 0.87 2 ! 25.2 0.7 3e-07 2.5e-05 7 38 .] 50 82 .. 46 82 .. 0.87 3 ! 24.1 0.1 6.6e-07 5.7e-05 11 38 .] 98 125 .. 84 125 .. 0.76 4 ! 12.9 0.2 0.0022 0.19 13 38 .] 142 167 .. 128 167 .. 0.83 5 ! 16.3 0.1 0.0002 0.017 2 37 .. 171 216 .. 170 216 .. 0.86 6 ! 26.0 0.2 1.7e-07 1.4e-05 5 36 .. 232 264 .. 228 265 .. 0.91 7 ! 29.3 0.0 1.6e-08 1.3e-06 3 37 .. 272 307 .. 270 308 .. 0.91 Alignments for each domain: == domain 1 score: 18.6 bits; conditional E-value: 3.7e-05 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +++tl H ++v+++af + a+la++s D+t+r++ sp|Q9D0I6|WSDU1_MOUSE 4 LIHTLADHgDDVSCCAF--SAALLATCSLDKTIRLY 37 689*****888****44..7888***********98 PP == domain 2 score: 25.2 bits; conditional E-value: 3e-07 EESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGHss.vtslafspdgawlasGsdDgtvriWd 38 l+ H+ v++++fsp+g+ las+s Dgt +W+ sp|Q9D0I6|WSDU1_MOUSE 50 LKFHTYaVHCCCFSPSGHVLASCSTDGTTVLWS 82 6678345*************************5 PP == domain 3 score: 24.1 bits; conditional E-value: 6.6e-07 SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriWd 38 s+v+ ++fspd+a+lasG Dg++ +W+ sp|Q9D0I6|WSDU1_MOUSE 98 SPVRVCCFSPDSAYLASGAADGSIALWN 125 45877779**********99*******8 PP == domain 4 score: 12.9 bits; conditional E-value: 0.0022 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 ++afspdg ++++Gs g + +Wd sp|Q9D0I6|WSDU1_MOUSE 142 LVACAFSPDGGLFVTGSSGGDLTVWD 167 44899***********98*******9 PP == domain 5 score: 16.3 bits; conditional E-value: 0.0002 EEEEEEESS.SSEEEEEEETTSSE.........EEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw.........lasGsdDgtvriW 37 +cl++ ++H ++t+++fs+ las++ D+ +++W sp|Q9D0I6|WSDU1_MOUSE 171 RCLHSEKAHdLGITCCSFSSQPLSggeglqsyqLASCGQDCEIKLW 216 799**9***555****877666669999999999************ PP == domain 6 score: 26.0 bits; conditional E-value: 1.7e-07 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvri 36 tl+GH +v ++afs+dg++lasGs D++v i sp|Q9D0I6|WSDU1_MOUSE 232 STLSGHcAPVLACAFSHDGKMLASGSVDKSVII 264 789***888*********************976 PP == domain 7 score: 29.3 bits; conditional E-value: 1.6e-08 EEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGHss.vtslafspdgawlasGsdDgtvriW 37 l+tlt H+ vt +af p+ +la+Gs+D+tv iW sp|Q9D0I6|WSDU1_MOUSE 272 VLHTLTQHTRyVTTCAFAPNTLLLATGSMDKTVNIW 307 69******445************************* PP >> sp|Q922V4|PLRG1_MOUSE Pleiotropic regulator 1 OS=Mus musculus OX=10090 GN=Plrg1 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 37.9 0.6 2.9e-11 2.5e-09 2 38 .] 194 231 .. 193 231 .. 0.94 2 ! 23.9 0.1 7.9e-07 6.7e-05 2 38 .] 236 273 .. 235 273 .. 0.93 3 ! 28.9 0.4 2e-08 1.7e-06 2 38 .] 278 315 .. 277 315 .. 0.96 4 ! 23.7 0.1 9.3e-07 7.9e-05 4 38 .] 322 357 .. 319 357 .. 0.77 5 ? 4.2 0.0 1.3 1.1e+02 5 37 .. 365 397 .. 361 398 .. 0.82 6 ! 20.7 0.1 7.8e-06 0.00067 4 38 .] 405 439 .. 402 439 .. 0.89 7 ? 7.6 0.0 0.11 9.6 11 37 .. 462 488 .. 452 489 .. 0.85 Alignments for each domain: == domain 1 score: 37.9 bits; conditional E-value: 2.9e-11 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++ r+++GH ++v+++a+ p ++w+++Gs D+t++iWd sp|Q922V4|PLRG1_MOUSE 194 KLYRVISGHlGWVRCIAVEPGNQWFVTGSADRTIKIWD 231 6678999******************************9 PP == domain 2 score: 23.9 bits; conditional E-value: 7.9e-07 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++ +ltGH s v+++ +s +++l+s+++D+ v+ Wd sp|Q922V4|PLRG1_MOUSE 236 KLKLSLTGHiSTVRGVIVSTRSPYLFSCGEDKQVKCWD 273 566799****99*************************9 PP == domain 3 score: 28.9 bits; conditional E-value: 2e-08 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + +r++ GH s v++l+ +p + l+++s+D t riWd sp|Q922V4|PLRG1_MOUSE 278 KVIRHYHGHlSAVYGLDLHPTLDVLVTCSRDSTARIWD 315 5689*********************************9 PP == domain 4 score: 23.7 bits; conditional E-value: 9.3e-07 EEEEESS.SS...EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ss...vtslafspdgawlasGsdDgtvriWd 38 ++tl+GH + v+++ + +++Gs D t+r+Wd sp|Q922V4|PLRG1_MOUSE 322 VHTLSGHtNAvatVRCQ---AAEPQIITGSHDTTIRLWD 357 8******8885555666...44444789*99*******9 PP == domain 5 score: 4.2 bits; conditional E-value: 1.3 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriW 37 tlt H +sv+++ +p +asGs +++ W sp|Q922V4|PLRG1_MOUSE 365 VTLTNHkKSVRAVVLHPLLYTFASGS-PDNIKQW 397 58999*999****8888888899999.8888888 PP == domain 6 score: 20.7 bits; conditional E-value: 7.8e-06 EEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 ++ l+GH+ ++ la++ dg ++ sG d+gt ++Wd sp|Q922V4|PLRG1_MOUSE 405 IQNLSGHNAiINTLAVNADGVLV-SGADNGTMHLWD 439 5789***7757***********7.8*9********9 PP == domain 7 score: 7.6 bits; conditional E-value: 0.11 SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriW 37 s++ ++af+++ + l+++ D+t++++ sp|Q922V4|PLRG1_MOUSE 462 SGIFACAFDRSESRLLTAEADKTIKVY 488 45999*************77*****98 PP >> sp|Q9DAW6|PRP4_MOUSE U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus OX=10090 GN=Prpf4 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 12.8 0.3 0.0025 0.21 13 38 .] 233 258 .. 214 258 .. 0.78 2 ! 24.4 0.3 5.3e-07 4.5e-05 2 38 .] 263 308 .. 262 308 .. 0.93 3 ! 16.3 0.2 0.00019 0.017 3 38 .] 314 350 .. 312 350 .. 0.79 4 ! 11.0 0.0 0.0093 0.8 5 38 .] 358 392 .. 354 392 .. 0.80 5 ! 35.0 0.1 2.3e-10 2e-08 1 38 [] 396 434 .. 396 434 .. 0.96 6 ! 17.5 0.0 8e-05 0.0069 2 37 .. 439 476 .. 438 477 .. 0.87 7 ! 30.0 0.0 8.9e-09 7.6e-07 1 37 [. 481 518 .. 481 519 .. 0.94 Alignments for each domain: == domain 1 score: 12.8 bits; conditional E-value: 0.0025 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 ++ + fsp++++la++++ g +++W+ sp|Q9DAW6|PRP4_MOUSE 233 ISYCHFSPNSKMLATACWSGLCKLWS 258 54455********************5 PP == domain 2 score: 24.4 bits; conditional E-value: 5.3e-07 EEEEEEESS.SSEEEEEEETTSSE........EEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw........lasGsdDgtvriWd 38 ++l+tl+GH ++v ++ f+p ++ las+ Dg+v++W+ sp|Q9DAW6|PRP4_MOUSE 263 SLLHTLRGHnTNVGAIVFHPKSTVsldqkdvnLASCAADGSVKLWS 308 579******766************************99*******5 PP == domain 3 score: 16.3 bits; conditional E-value: 0.00019 EEEEEESS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawl.asGsdDgtvriWd 38 ++ ++GH v + ++p+g++l +++ D++ r+Wd sp|Q9DAW6|PRP4_MOUSE 314 PVADIEGHtVRVARVMWHPSGRFLgTTCY-DRSWRLWD 350 5666789944466777*******966667.*******9 PP == domain 4 score: 11.0 bits; conditional E-value: 0.0093 EEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 + +GH +v+++af++dg++ a +G+ D r+Wd sp|Q9DAW6|PRP4_MOUSE 358 LHQEGHsMGVYDIAFHQDGSL-AgTGGLDAFGRVWD 392 4558**555************.54889999999998 PP == domain 5 score: 35.0 bits; conditional E-value: 2.3e-10 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+c+ l+GH + ++++ fsp+g +a+Gs D+t+++Wd sp|Q9DAW6|PRP4_MOUSE 396 GRCIMFLEGHlKEIYGINFSPNGYHIATGSGDNTCKVWD 434 68999************************99*******9 PP == domain 6 score: 17.5 bits; conditional E-value: 8e-05 EEEEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtsla.fspdgawlasGsdDgtvriW 37 +c++t+ +H + vt+++ + +g++l++G +D+t +iW sp|Q9DAW6|PRP4_MOUSE 439 RCVYTIPAHqNLVTGVKfEPIHGDFLLTGAYDNTAKIW 476 79*******555****976668888****99******* PP == domain 7 score: 30.0 bits; conditional E-value: 8.9e-09 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +++l+tl GH + v +l+ s+dg+++a++s+D+t ++W sp|Q9DAW6|PRP4_MOUSE 481 WSPLKTLAGHeGKVMGLDISSDGQLIATCSYDRTFKLW 518 6799******777************************* PP >> sp|Q3UKJ7|SMU1_MOUSE WD40 repeat-containing protein SMU1 OS=Mus musculus OX=10090 GN=Smu1 PE=2 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 29.6 0.0 1.2e-08 1.1e-06 5 38 .] 207 242 .. 203 242 .. 0.85 2 ! 21.4 0.0 4.7e-06 0.00041 13 38 .] 267 292 .. 252 292 .. 0.88 3 ! 27.8 0.1 4.4e-08 3.8e-06 1 36 [. 296 333 .. 296 334 .. 0.93 4 ! 33.7 0.1 6e-10 5.2e-08 1 38 [] 339 377 .. 339 377 .. 0.92 5 ? 5.6 0.1 0.45 39 3 34 .. 431 466 .. 429 470 .. 0.66 6 ! 19.1 0.0 2.6e-05 0.0022 1 38 [] 474 512 .. 474 512 .. 0.93 Alignments for each domain: == domain 1 score: 29.6 bits; conditional E-value: 1.2e-08 EEEE.SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtlt.GH.ssvtslafspdgawlasGsdDgtvriWd 38 r+++ G+ s+v + +fspdg++l++Gs Dg + +W+ sp|Q3UKJ7|SMU1_MOUSE 207 RHIKfGQkSHVECARFSPDGQYLVTGSVDGFIEVWN 242 5555577666*************************8 PP == domain 2 score: 21.4 bits; conditional E-value: 4.7e-06 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 v +++fs+d +la+G Dg++++W+ sp|Q3UKJ7|SMU1_MOUSE 267 VLCMCFSRDTEMLATGAQDGKIKVWK 292 99***********************6 PP == domain 3 score: 27.8 bits; conditional E-value: 4.4e-08 TEEEEEEE.SS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 1 gqclrtlt.GH.ssvtslafspdgawlasGsdDgtvri 36 gqclr ++ +H ++vt+l+fs+d++ ++s+s D+t+ri sp|Q3UKJ7|SMU1_MOUSE 296 GQCLRRFErAHsKGVTCLSFSKDSSQILSASFDQTIRI 333 79*****55**999****************99*****9 PP == domain 4 score: 33.7 bits; conditional E-value: 6e-10 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g++l++++GH s+v+ f +dg++++s+s Dgtv+iW+ sp|Q3UKJ7|SMU1_MOUSE 339 GKTLKEFRGHsSFVNEATFTQDGHYIISASSDGTVKIWN 377 6889******777*************99988*******8 PP == domain 5 score: 5.6 bits; conditional E-value: 0.45 EEEEEE.SS.SS...EEEEEEETTSSEEEEEETTSEE CS WD40 3 clrtlt.GH.ss...vtslafspdgawlasGsdDgtv 34 +r+++ G + v ++a sp g w+ + ++D + sp|Q3UKJ7|SMU1_MOUSE 431 IVRSFSsGKrEGgdfV-CCALSPRGEWIYCVGEDFVL 466 5666643333113447.999********977888665 PP == domain 6 score: 19.1 bits; conditional E-value: 2.6e-05 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g++ rtlt H ++v ++a +p+++++a+ s+Dg +++W+ sp|Q3UKJ7|SMU1_MOUSE 474 GKLERTLTVHeKDVIGIAHHPHQNLIATYSEDGLLKLWK 512 57789********99***********9989********6 PP >> sp|Q8CIE6|COPA_MOUSE Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 11.6 0.0 0.0058 0.5 13 38 .] 12 37 .. 2 37 .. 0.85 2 ! 23.7 0.1 8.8e-07 7.5e-05 5 38 .] 45 79 .. 41 79 .. 0.91 3 ! 27.2 0.1 6.8e-08 5.8e-06 2 38 .] 84 121 .. 83 121 .. 0.91 4 ! 31.9 0.2 2.2e-09 1.9e-07 2 38 .] 126 163 .. 125 163 .. 0.95 5 ! 22.9 0.1 1.6e-06 0.00013 5 37 .. 199 232 .. 196 233 .. 0.91 6 ! 23.8 0.1 8.4e-07 7.2e-05 4 38 .] 242 277 .. 239 277 .. 0.93 7 ? 1.5 0.0 9.1 7.8e+02 13 32 .. 296 312 .. 282 317 .. 0.68 Alignments for each domain: == domain 1 score: 11.6 bits; conditional E-value: 0.0058 EEEEEEETTSSEEEEE.ETTSEEEEEE CS WD40 13 vtslafspdgawlasG.sdDgtvriWd 38 v +l+f+p +w++++ + +g + +Wd sp|Q8CIE6|COPA_MOUSE 12 VKGLSFHPKRPWILTSlH-NGVIQLWD 37 999*************66.*******9 PP == domain 2 score: 23.7 bits; conditional E-value: 8.8e-07 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++ H ++v++++f++ +++++sG+dD ++++W+ sp|Q8CIE6|COPA_MOUSE 45 DKFDEHdGPVRGIDFHKQQPLFVSGGDDYKIKVWN 79 56889*888*************************8 PP == domain 3 score: 27.2 bits; conditional E-value: 6.8e-08 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +cl tl GH + ++ f+++ +w++s+sdD+t+r+W+ sp|Q8CIE6|COPA_MOUSE 84 RCLFTLLGHlDYIRTTFFHHEYPWILSASDDQTIRVWN 121 79*******999*5555********************8 PP == domain 4 score: 31.9 bits; conditional E-value: 2.2e-09 EEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 +c+ +ltGH++ v + +f+p+ ++++s+s D+tvr+Wd sp|Q8CIE6|COPA_MOUSE 126 TCVCVLTGHNHyVMCAQFHPSEDLVVSASLDQTVRVWD 163 7999*****888*************************9 PP == domain 5 score: 22.9 bits; conditional E-value: 1.6e-06 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriW 37 ++l+GH +v+ af+p ++++sG dD+ v+iW sp|Q8CIE6|COPA_MOUSE 199 HVLEGHdRGVNWAAFHPTMPLIVSGADDRQVKIW 232 899***666************************* PP == domain 6 score: 23.8 bits; conditional E-value: 8.4e-07 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + t++GH ++v++ f+p + +++s s+D+++r+Wd sp|Q8CIE6|COPA_MOUSE 242 VDTCRGHyNNVSCAVFHPRQELILSNSEDKSIRVWD 277 6799*******9999*********88*********9 PP == domain 7 score: 1.5 bits; conditional E-value: 9.1 EEEEEEETTSSEEEEEETTS CS WD40 13 vtslafspdgawlasGsdDg 32 v a +p+ +++a+G+ Dg sp|Q8CIE6|COPA_MOUSE 296 VL--AAHPNLNLFAAGH-DG 312 44..4599********9.76 PP >> sp|O54929|WSB2_MOUSE WD repeat and SOCS box-containing protein 2 OS=Mus musculus OX=10090 GN=Wsb2 PE=2 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 7.9 0.2 0.088 7.6 14 26 .. 30 42 .. 14 50 .. 0.82 2 ! 11.8 0.0 0.0052 0.45 10 37 .. 115 138 .. 107 139 .. 0.75 3 ! 31.9 0.1 2.3e-09 1.9e-07 4 38 .] 146 182 .. 143 182 .. 0.87 4 ! 22.2 0.3 2.6e-06 0.00022 1 38 [] 187 225 .. 187 225 .. 0.91 5 ! 33.2 0.1 8.8e-10 7.6e-08 3 38 .] 231 267 .. 229 267 .. 0.94 6 ! 20.3 0.0 1.1e-05 0.00092 10 37 .. 292 320 .. 280 320 .. 0.94 7 ! 14.2 0.0 0.00086 0.074 15 37 .. 338 360 .. 332 361 .. 0.92 Alignments for each domain: == domain 1 score: 7.9 bits; conditional E-value: 0.088 EEEEEETTSSEEE CS WD40 14 tslafspdgawla 26 +s+afspdg+w+a sp|O54929|WSB2_MOUSE 30 WSVAFSPDGSWFA 42 79*********85 PP == domain 2 score: 11.8 bits; conditional E-value: 0.0052 S.SS..EEEEEEETTSSEEEEEETTSEEEEE CS WD40 10 H.ss..vtslafspdgawlasGsdDgtvriW 37 H + v++l la+G Dg ++iW sp|O54929|WSB2_MOUSE 115 HpQApdVSCL-------ILATGLNDGQIKIW 138 5422469999.......4579977******* PP == domain 3 score: 31.9 bits; conditional E-value: 2.3e-09 EEEEESSSS.EEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 4 lrtltGHss.vtslafspdgawl.asGsdDgtvriWd 38 l l+GH++ v++l+f p+g+++ +s+s+D+t+riWd sp|O54929|WSB2_MOUSE 146 LLNLSGHQDvVRDLSFTPSGSLIlVSASRDKTLRIWD 182 56799**8857***********62589*********9 PP == domain 4 score: 22.2 bits; conditional E-value: 2.6e-06 TEEEEEEESS.SSEEEEEEETTSSEEEEE.ETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasG.sdDgtvriWd 38 g+++++l+GH ++v++++ spd ++l+s+ + ++v +W+ sp|O54929|WSB2_MOUSE 187 GKQIQVLSGHlQWVYCCSISPDCSMLCSAaG-EKSVFLWS 225 57899*********************98735.*******5 PP == domain 5 score: 33.2 bits; conditional E-value: 8.8e-10 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++r+l+GH ssv s++fspd+a+l+++s+D +v +Wd sp|O54929|WSB2_MOUSE 231 LIRKLEGHqSSVVSCDFSPDSALLVTASYDTSVIMWD 267 6899****99999***********************9 PP == domain 6 score: 20.3 bits; conditional E-value: 1.1e-05 S.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvriW 37 H ss +s++fsp+g +la+ dD+ +riW sp|O54929|WSB2_MOUSE 292 HmSSLRSVCFSPEGLYLATVADDRLLRIW 320 99999*************9999******* PP == domain 7 score: 14.2 bits; conditional E-value: 0.00086 EEEEETTSSEEEEEETTSEEEEE CS WD40 15 slafspdgawlasGsdDgtvriW 37 ++ f p+g +a+G++Dg+v +W sp|O54929|WSB2_MOUSE 338 CCTFFPHGGIIATGTRDGHVQFW 360 788******************** PP >> sp|O55029|COPB2_MOUSE Coatomer subunit beta' OS=Mus musculus OX=10090 GN=Copb2 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 11.2 0.0 0.0081 0.7 9 38 .] 13 43 .. 6 43 .. 0.82 2 ? 9.0 0.0 0.039 3.4 13 38 .] 60 85 .. 47 85 .. 0.81 3 ! 28.3 0.0 3.1e-08 2.6e-06 4 38 .] 92 127 .. 89 127 .. 0.92 4 ! 18.2 0.1 5e-05 0.0042 1 37 [. 132 170 .. 132 171 .. 0.86 5 ! 27.6 0.0 5.1e-08 4.4e-06 3 38 .] 177 215 .. 175 215 .. 0.91 6 ! 35.4 0.1 1.7e-10 1.5e-08 2 37 .. 220 256 .. 219 257 .. 0.95 7 ? 2.3 0.0 5 4.3e+02 16 32 .. 358 373 .. 349 377 .. 0.86 Alignments for each domain: == domain 1 score: 11.2 bits; conditional E-value: 0.0081 SSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GHss.vtslafspdgawlasGsdDgtvriWd 38 + s+ v s++ +p +w++++ ++g+v +W+ sp|O55029|COPB2_MOUSE 13 ARSDrVKSVDLHPTEPWMLASLYNGSVCVWN 43 4444599***********99967*******8 PP == domain 2 score: 9.0 bits; conditional E-value: 0.039 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 v++ +f ++w+++G dD +r+++ sp|O55029|COPB2_MOUSE 60 VRAAKFVARKNWVVTGADDMQIRVFN 85 6777788899**************97 PP == domain 3 score: 28.3 bits; conditional E-value: 3.1e-08 EEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 ++ +++Hs+ ++++a++p +++++++sdD +++Wd sp|O55029|COPB2_MOUSE 92 VHMFEAHSDyIRCIAVHPTQPFILTSSDDMLIKLWD 127 799****556*************************9 PP == domain 4 score: 18.2 bits; conditional E-value: 5e-05 TEEEEEEESSSS.EEEEE.EETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGHss.vtsla.fspdgawlasGsdDgtvriW 37 ++c ++++GH++ v + +++d++ +as+s D+t+++W sp|O55029|COPB2_MOUSE 132 WSCSQVFEGHTHyVMQIViNPKDNNQFASASLDRTIKVW 170 6899******66797777688888889************ PP == domain 5 score: 27.6 bits; conditional E-value: 5.1e-08 EEEEEESS.SSEEEEE..EETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtsla..fspdgawlasGsdDgtvriWd 38 + tl+GH ++v++++ d+++l+sG dD+ v+iWd sp|O55029|COPB2_MOUSE 177 PNFTLEGHeKGVNCIDyySGGDKPYLISGADDRLVKIWD 215 56799***********888888888*************9 PP == domain 6 score: 35.4 bits; conditional E-value: 1.7e-10 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +c++tl+GH ++v++ +f+p+ + +++Gs+DgtvriW sp|O55029|COPB2_MOUSE 220 TCVQTLEGHaQNVSCASFHPELPIIITGSEDGTVRIW 256 69*******988************************* PP == domain 7 score: 2.3 bits; conditional E-value: 5 EEEETTSSEEEEEETTS CS WD40 16 lafspdgawlasGsdDg 32 ++ +p+g++++ ++ Dg sp|O55029|COPB2_MOUSE 358 IQHNPNGRFVVVCG-DG 373 5689******9999.87 PP >> sp|Q5SRY7|FBW1B_MOUSE F-box/WD repeat-containing protein 11 OS=Mus musculus OX=10090 GN=Fbxw11 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.1 0.1 0.00047 0.04 11 38 .] 241 266 .. 228 266 .. 0.74 2 ! 30.0 0.2 9.4e-09 8.1e-07 2 38 .] 271 306 .. 270 306 .. 0.89 3 ! 12.5 0.1 0.0032 0.27 2 38 .] 311 346 .. 310 346 .. 0.74 4 ! 19.3 0.1 2.2e-05 0.0019 4 38 .] 356 389 .. 353 389 .. 0.83 5 ! 24.0 0.1 7e-07 6e-05 3 38 .] 395 429 .. 393 429 .. 0.84 6 ! 26.9 0.0 8.6e-08 7.4e-06 1 38 [] 433 469 .. 433 469 .. 0.87 7 ! 15.2 0.1 0.00043 0.037 3 38 .] 484 518 .. 483 518 .. 0.77 Alignments for each domain: == domain 1 score: 15.1 bits; conditional E-value: 0.00047 SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriWd 38 ++v++l+++ + ++sG +D++++iWd sp|Q5SRY7|FBW1B_MOUSE 241 KGVYCLQYD--DDKIISGLRDNSIKIWD 266 569***544..444669*99*******9 PP == domain 2 score: 30.0 bits; conditional E-value: 9.4e-09 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +cl++ltGH +sv +l + d + +++Gs D tvr+Wd sp|Q5SRY7|FBW1B_MOUSE 271 ECLKVLTGHtGSVLCL--QYDERVIVTGSSDSTVRVWD 306 7********888****..66666699**99*******9 PP == domain 3 score: 12.5 bits; conditional E-value: 0.0032 EEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 + l tl H+ v +l+f ++ +++++s+D+++ +Wd sp|Q5SRY7|FBW1B_MOUSE 311 EVLNTLIHHNEaVLHLRF--SNGLMVTCSKDRSIAVWD 346 567888889445999944..3444679**********9 PP == domain 4 score: 19.3 bits; conditional E-value: 2.2e-05 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 r+l GH v+ + + d ++++s+s D+t+++W+ sp|Q5SRY7|FBW1B_MOUSE 356 RRVLVGHrAAVNVV--DFDDKYIVSASGDRTIKVWS 389 57899**8888777..669999998877*******5 PP == domain 5 score: 24.0 bits; conditional E-value: 7e-07 EEEEEESS.SSEEEEEEETTSSE....EEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw....lasGsdDgtvriWd 38 +rtl GH ++ +l ++ ++sGs D+t+r+Wd sp|Q5SRY7|FBW1B_MOUSE 395 FVRTLNGHkRGIACL------QYrdrlVVSGSSDNTIRLWD 429 689*****555****......66666589**99*******9 PP == domain 6 score: 26.9 bits; conditional E-value: 8.6e-08 TEEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 g clr+l+GH v+++ d++ ++sG +Dg++++Wd sp|Q5SRY7|FBW1B_MOUSE 433 GACLRVLEGHEElVRCI--RFDNKRIVSGAYDGKIKVWD 469 57********446****..55777799**99*******9 PP == domain 7 score: 15.2 bits; conditional E-value: 0.00043 EEEEEESSSS.EEEEEEETTSSE....EEEEETTSEEEEEE CS WD40 3 clrtltGHss.vtslafspdgaw....lasGsdDgtvriWd 38 clrtl Hs+ v l+ + ++s+s D t+ iWd sp|Q5SRY7|FBW1B_MOUSE 484 CLRTLVEHSGrVFRLQ------FdefqIISSSHDDTILIWD 518 99******445****5......44445446666*******9 PP >> sp|Q3ULA2|FBW1A_MOUSE F-box/WD repeat-containing protein 1A OS=Mus musculus OX=10090 GN=Btrc PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.8 0.2 0.00028 0.024 11 38 .] 304 329 .. 288 329 .. 0.75 2 ! 28.2 0.2 3.4e-08 2.9e-06 2 38 .] 334 369 .. 333 369 .. 0.88 3 ! 11.4 0.0 0.0069 0.59 3 38 .] 375 409 .. 373 409 .. 0.76 4 ! 20.4 0.1 9.9e-06 0.00084 4 38 .] 419 452 .. 416 452 .. 0.84 5 ! 23.8 0.1 8.1e-07 6.9e-05 3 38 .] 458 492 .. 456 492 .. 0.84 6 ! 26.7 0.0 9.9e-08 8.4e-06 1 38 [] 496 532 .. 496 532 .. 0.86 7 ! 15.1 0.1 0.00047 0.04 3 38 .] 547 581 .. 546 581 .. 0.79 Alignments for each domain: == domain 1 score: 15.8 bits; conditional E-value: 0.00028 SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriWd 38 ++v++l + d + ++sG +D+t++iWd sp|Q3ULA2|FBW1A_MOUSE 304 KGVYCL--QYDDQKIVSGLRDNTIKIWD 329 559***..55666699**99*******9 PP == domain 2 score: 28.2 bits; conditional E-value: 3.4e-08 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +c r+ltGH +sv +l + d + +++Gs D tvr+Wd sp|Q3ULA2|FBW1A_MOUSE 334 ECKRILTGHtGSVLCL--QYDERVIITGSSDSTVRVWD 369 799******888****..66666699**99*******9 PP == domain 3 score: 11.4 bits; conditional E-value: 0.0069 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 l tl H v +l ++ +++++s+D+++ +Wd sp|Q3ULA2|FBW1A_MOUSE 375 MLNTLIHHcEAVLHL--RFNNGMMVTCSKDRSIAVWD 409 567888885559999..335555889**********9 PP == domain 4 score: 20.4 bits; conditional E-value: 9.9e-06 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 r+l GH v+ + + d ++++s+s D+t+++W+ sp|Q3ULA2|FBW1A_MOUSE 419 RRVLVGHrAAVNVV--DFDDKYIVSASGDRTIKVWN 452 57899**8888777..669999998877*******8 PP == domain 5 score: 23.8 bits; conditional E-value: 8.1e-07 EEEEEESS.SSEEEEEEETTSSE....EEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw....lasGsdDgtvriWd 38 +rtl GH ++ +l ++ ++sGs D+t+r+Wd sp|Q3ULA2|FBW1A_MOUSE 458 FVRTLNGHkRGIACL------QYrdrlVVSGSSDNTIRLWD 492 689*****555****......66666589**99*******9 PP == domain 6 score: 26.7 bits; conditional E-value: 9.9e-08 TEEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 g clr+l+GH v+++ d++ ++sG +Dg++++Wd sp|Q3ULA2|FBW1A_MOUSE 496 GACLRVLEGHEElVRCI--RFDNKRIVSGAYDGKIKVWD 532 57********446****..55777799**99*******9 PP == domain 7 score: 15.1 bits; conditional E-value: 0.00047 EEEEEESSSS.EEEEEEETTSSE....EEEEETTSEEEEEE CS WD40 3 clrtltGHss.vtslafspdgaw....lasGsdDgtvriWd 38 clrtl Hs+ v l ++ ++s+s D t+ iWd sp|Q3ULA2|FBW1A_MOUSE 547 CLRTLVEHSGrVFRL------QFdefqIVSSSHDDTILIWD 581 99******445****......555555556766*******9 PP >> tr|D3Z757|D3Z757_MOUSE WD repeat domain 86 OS=Mus musculus OX=10090 GN=Wdr86 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 25.1 0.1 3.2e-07 2.8e-05 3 38 .] 7 43 .. 5 43 .. 0.91 2 ! 13.6 0.1 0.0014 0.12 1 38 [] 47 83 .. 47 83 .. 0.83 3 ! 22.8 0.1 1.7e-06 0.00015 1 37 [. 87 122 .. 87 123 .. 0.76 4 ! 15.6 0.0 0.00033 0.028 2 37 .. 128 178 .. 127 179 .. 0.89 5 ! 18.5 1.3 3.9e-05 0.0033 2 38 .] 184 221 .. 183 221 .. 0.89 6 ! 16.5 0.0 0.00016 0.014 1 37 [. 225 260 .. 225 260 .. 0.83 7 ? 3.3 0.0 2.5 2.1e+02 3 31 .. 267 294 .. 265 301 .. 0.67 8 ! 24.1 0.1 6.8e-07 5.8e-05 2 38 .] 306 341 .. 305 341 .. 0.88 Alignments for each domain: == domain 1 score: 25.1 bits; conditional E-value: 3.2e-07 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 lr++ H ++++ l+ spdg+ l++Gs+Dgt r+W+ tr|D3Z757|D3Z757_MOUSE 7 ALRVCADHrGGINWLSLSPDGQRLLTGSEDGTARLWS 43 5788889*999*************************5 PP == domain 2 score: 13.6 bits; conditional E-value: 0.0014 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 gqc l GH s vt + ++ a+ ++s D+t+r Wd tr|D3Z757|D3Z757_MOUSE 47 GQCCALLQGHeSYVTFCHLEDEAAF--TCSADCTIRRWD 83 6888899***888*98866777777..7989*******9 PP == domain 3 score: 22.8 bits; conditional E-value: 1.7e-06 TEEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGHss.vtslafspdgawlasGsdDgtvriW 37 gqcl++++GH+s v+ + + d+ l+s+s+D+t r+W tr|D3Z757|D3Z757_MOUSE 87 GQCLQVYRGHTSiVNRILVANDQ--LFSSSYDRTARVW 122 79********5546888444444..447888******* PP == domain 4 score: 15.6 bits; conditional E-value: 0.00033 EEEEEEESS.SSEEEEEEETTSSE..............EEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw..............lasGsdDgtvriW 37 q ++++GH ++v la+s ++ l++Gs D t ++W tr|D3Z757|D3Z757_MOUSE 128 QVSQEFRGHrNCVLTLAYSAPEDLpqdpcmeaamggglLVTGSSDDTAKVW 178 67789***********988888889999999999999999**99******* PP == domain 5 score: 18.5 bits; conditional E-value: 3.9e-05 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 c +tl+GH + v +l + +++ ++Gs D tvr Wd tr|D3Z757|D3Z757_MOUSE 184 CCHQTLRGHtGAVLCLVLHVSSHTAFTGSTDATVRAWD 221 68899****777****99999999889**********9 PP == domain 6 score: 16.5 bits; conditional E-value: 0.00016 TEEEEEEESS.SSEEEEEEETTSSE....EEEEETTSEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgaw....lasGsdDgtvriW 37 g++lr+++ H +sv +l + l sGs D+tv+ W tr|D3Z757|D3Z757_MOUSE 225 GEQLRVFREHqGSVICL------ELtdrlLYSGSADRTVKCW 260 5789******8888799......55555499*********** PP == domain 7 score: 3.3 bits; conditional E-value: 2.5 EEEEEESS.SSEEEEEEETTSSE....EEEEETT CS WD40 3 clrtltGH.ssvtslafspdgaw....lasGsdD 31 + t+ +H sv++l ++ l++Gs D tr|D3Z757|D3Z757_MOUSE 267 RVLTFPAHrHSVSAL------KYhagtLFTGSGD 294 577899**888****......5533333477656 PP == domain 8 score: 24.1 bits; conditional E-value: 6.8e-07 EEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 ++r+++GH++ +++l + +g+ l ++s Dg +r+Wd tr|D3Z757|D3Z757_MOUSE 306 VLQRVFRGHTFvINCL--QVHGQVLYTASHDGALRLWD 341 5799*****7757***..889999999999*******9 PP >> sp|P97452|BOP1_MOUSE Ribosome biogenesis protein BOP1 OS=Mus musculus OX=10090 GN=Bop1 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 41.5 0.2 2.1e-12 1.8e-10 6 37 .. 394 426 .. 390 427 .. 0.93 2 ? 7.0 0.0 0.17 14 3 33 .. 433 464 .. 431 468 .. 0.71 3 ? 5.2 0.0 0.63 54 9 26 .. 518 536 .. 508 545 .. 0.81 4 ! 17.0 0.0 0.00012 0.01 8 37 .. 563 591 .. 555 592 .. 0.86 5 ? 7.3 0.1 0.14 12 11 34 .. 607 630 .. 597 634 .. 0.85 6 ! 19.2 0.0 2.3e-05 0.002 3 35 .. 641 674 .. 639 675 .. 0.89 7 ! 27.5 0.0 5.5e-08 4.7e-06 3 37 .. 692 731 .. 690 732 .] 0.88 Alignments for each domain: == domain 1 score: 41.5 bits; conditional E-value: 2.1e-12 EEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 6 tltGHss.vtslafspdgawlasGsdDgtvriW 37 +++GHs+ v++l++sp g+wlasGsdDgt+++W sp|P97452|BOP1_MOUSE 394 VYRGHSDlVRCLSVSPGGQWLASGSDDGTLKLW 426 69***8889************************ PP == domain 2 score: 7.0 bits; conditional E-value: 0.17 EEEEEESS.SS.EEEEEEETTSSE..EEEEETTSE CS WD40 3 clrtltGH.ss.vtslafspdgaw..lasGsdDgt 33 c++t H ++ v+s+a++p+ + +a+++ D sp|P97452|BOP1_MOUSE 433 CMKT--VHvGGvVRSIAWNPNPTIclVAAAM-DDA 464 6666..7987867***********7434445.554 PP == domain 3 score: 5.2 bits; conditional E-value: 0.63 SS.SSEEEEEEETTSSEEE CS WD40 9 GH.ssvtslafspdgawla 26 H ++vt + ++ g++la sp|P97452|BOP1_MOUSE 518 CHsKPVTQVTWHGRGDYLA 536 8*999************87 PP == domain 4 score: 17.0 bits; conditional E-value: 0.00012 ESSSSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 8 tGHssvtslafspdgawlasGsdDgtvriW 37 + H+ v ++af+p+ ++l+ +s +++ri+ sp|P97452|BOP1_MOUSE 563 RSHGQVQCVAFHPSRPFLLVAS-QRSIRIY 591 37877**************9**.******8 PP == domain 5 score: 7.3 bits; conditional E-value: 0.14 SSEEEEEEETTSSEEEEEETTSEE CS WD40 11 ssvtslafspdgawlasGsdDgtv 34 ++v+s+a++p g+ +++Gs+D ++ sp|P97452|BOP1_MOUSE 607 KWVSSMAVHPAGDNIICGSYDSKL 630 5699***************99887 PP == domain 6 score: 19.2 bits; conditional E-value: 2.3e-05 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvr 35 + ++l+ H + +++af+p +++asGsdDg+v sp|P97452|BOP1_MOUSE 641 PYKVLRHHkKALRAVAFHPRYPLFASGSDDGSVI 674 66789999888*********************96 PP == domain 7 score: 27.5 bits; conditional E-value: 5.5e-08 EEEEEESS..SS...EEEEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGH..ss...vtslafspdgawlasGsdDgtvriW 37 ++++l+GH + v ++af+p ++w++s++ Dgt+r++ sp|P97452|BOP1_MOUSE 692 PVKVLKGHtlTRdlgVLDVAFHPTQPWVFSSGADGTIRLF 731 7899****7644899*************99888*****97 PP >> sp|Q6NS57|MABP1_MOUSE Mitogen-activated protein kinase-binding protein 1 OS=Mus musculus OX=10090 GN=Mapkbp1 PE=1 SV # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.1 0.0 0.00011 0.0094 10 38 .] 85 121 .. 76 121 .. 0.73 2 ! 13.6 0.0 0.0014 0.12 3 37 .. 127 164 .. 125 164 .. 0.79 3 ! 13.0 0.1 0.0022 0.19 12 37 .. 179 204 .. 169 204 .. 0.90 4 ? 9.9 0.0 0.02 1.7 5 38 .] 274 301 .. 270 301 .. 0.73 5 ! 14.1 0.1 0.00098 0.084 15 38 .] 344 367 .. 323 367 .. 0.86 6 ! 13.2 0.2 0.0018 0.16 13 38 .] 387 422 .. 376 422 .. 0.71 7 ? 8.6 0.0 0.055 4.7 13 30 .. 477 494 .. 466 501 .. 0.81 8 ? 4.5 0.0 1.1 93 7 36 .. 512 545 .. 504 547 .. 0.71 9 ? 10.5 0.0 0.013 1.1 3 36 .. 554 579 .. 552 590 .. 0.63 10 ? 7.8 0.0 0.094 8.1 15 38 .] 661 684 .. 643 684 .. 0.76 11 ! 16.7 0.3 0.00014 0.012 1 37 [. 688 725 .. 688 726 .. 0.88 Alignments for each domain: == domain 1 score: 17.1 bits; conditional E-value: 0.00011 S..SS....EEEEEEETTSSEEEEE..ETTSEEEEEE CS WD40 10 H..ss....vtslafspdgawlasG..sdDgtvriWd 38 H +s +t+lafspdg++l++G + + vr+Wd sp|Q6NS57|MABP1_MOUSE 85 HilNSsrktITALAFSPDGKYLVTGesGHMPAVRVWD 121 455334666**************98654588888887 PP == domain 2 score: 13.6 bits; conditional E-value: 0.0014 EEEEEESSSS.EEEEEEETTSSEEEEEET..TSEEEEE CS WD40 3 clrtltGHss.vtslafspdgawlasGsd..DgtvriW 37 ++ +l H+ v ++afsp+ ++++s ++ D v +W sp|Q6NS57|MABP1_MOUSE 127 QVAELQEHKYgVACVAFSPSAKYIVSVGYqhDMIVNVW 164 56788899555************99755223**99999 PP == domain 3 score: 13.0 bits; conditional E-value: 0.0022 S.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 12 s.vtslafspdgawlasGsdDgtvriW 37 s vt+++fs d +++++++ ++++++W sp|Q6NS57|MABP1_MOUSE 179 SrVTAVSFSEDCSYFVTAG-NRHIKFW 204 349****************.******* PP == domain 4 score: 9.9 bits; conditional E-value: 0.02 EEEESSSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGHssvtslafspdgawlasGsdDgtvriWd 38 rt +H ++ s + ++++G+ Dgtvr+++ sp|Q6NS57|MABP1_MOUSE 274 RTTVAH-CI-----SVTQEYIFCGCADGTVRLFN 301 555566.44.....33669999**99******97 PP == domain 5 score: 14.1 bits; conditional E-value: 0.00098 EEEEETTSSEEEEEETTSEEEEEE CS WD40 15 slafspdgawlasGsdDgtvriWd 38 +l f+p ++wl++ D+++++Wd sp|Q6NS57|MABP1_MOUSE 344 ALTFDPTNQWLSCVYNDHSIYVWD 367 688*******965578*******9 PP == domain 6 score: 13.2 bits; conditional E-value: 0.0018 EEEEE...........EETTSSEEEEEETTSEEEEEE CS WD40 13 vtsla...........fspdgawlasGsdDgtvriWd 38 v+s+ p +++++++s D+t+r+W+ sp|Q6NS57|MABP1_MOUSE 387 VWSVEvypeikdshqaCLPPSSFITCSS-DNTIRLWN 422 5655555555555555778889987667.*******8 PP == domain 7 score: 8.6 bits; conditional E-value: 0.055 EEEEEEETTSSEEEEEET CS WD40 13 vtslafspdgawlasGsd 30 ++s++ sp+g+ lasG++ sp|Q6NS57|MABP1_MOUSE 477 IRSVCISPNGQHLASGDR 494 89***********99865 PP == domain 8 score: 4.5 bits; conditional E-value: 1.1 EESS.SSEEEEE...EETTSSE...EEEEETTSEEEE CS WD40 7 ltGH.ssvtsla...fspdgaw...lasGsdDgtvri 36 ++H s + +l + las+s+D+ +++ sp|Q6NS57|MABP1_MOUSE 512 VEAHdSEILCLEyskPDT---GlklLASASRDRLIHV 545 579966699997533333...24558999****9987 PP == domain 9 score: 10.5 bits; conditional E-value: 0.013 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvri 36 +++tl+ H ss+t+++ + ++s Dg vr+ sp|Q6NS57|MABP1_MOUSE 554 LQQTLDEHsSSITAVK------F--AAS-DGQVRM 579 7899****888****4......4..344.444443 PP == domain 10 score: 7.8 bits; conditional E-value: 0.094 EEEEETTSSEEEEEETTSEEEEEE CS WD40 15 slafspdgawlasGsdDgtvriWd 38 ++++p+g ++a+++ D+++ i+d sp|Q6NS57|MABP1_MOUSE 661 KVQTDPSGIYIATSCSDKNLSIFD 684 6789*******96644*****998 PP == domain 11 score: 16.7 bits; conditional E-value: 0.00014 TEEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGHss.vtslafspdgawlasGsdDgtvriW 37 g+c+ t GHs vt+++fs d + l+s s D + +W sp|Q6NS57|MABP1_MOUSE 688 GECVATMFGHSEiVTGMKFSNDCKHLISVSGDSCIFVW 725 68999999**6657************98766******* PP >> sp|P62881|GNB5_MOUSE Guanine nucleotide-binding protein subunit beta-5 OS=Mus musculus OX=10090 GN=Gnb5 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 29.2 0.2 1.7e-08 1.4e-06 3 38 .] 97 133 .. 95 133 .. 0.93 2 ? 5.3 0.0 0.57 49 12 37 .. 149 174 .. 135 174 .. 0.81 3 ? 8.9 0.1 0.043 3.7 13 38 .] 198 223 .. 188 223 .. 0.64 4 ! 23.7 0.1 8.9e-07 7.7e-05 1 38 [] 227 267 .. 227 267 .. 0.91 5 ! 29.1 0.0 1.8e-08 1.5e-06 1 38 [] 271 309 .. 271 309 .. 0.97 6 ! 13.0 0.1 0.0021 0.18 14 38 .] 329 353 .. 320 353 .. 0.91 7 ! 27.2 0.7 7e-08 6e-06 4 37 .. 360 394 .. 357 394 .. 0.91 Alignments for each domain: == domain 1 score: 29.2 bits; conditional E-value: 1.7e-08 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + rtl+GH + v ++++++d++ ++s+s Dg+v +Wd sp|P62881|GNB5_MOUSE 97 TRRTLKGHgNKVLCMDWCKDKRRIVSSSQDGKVIVWD 133 6799****888*************************9 PP == domain 2 score: 5.3 bits; conditional E-value: 0.57 SEEEEEEETTSSEEEEEETTSEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriW 37 +v ++a+ p+g +a+G+ D+++ ++ sp|P62881|GNB5_MOUSE 149 WVMACAYAPSGCAIACGGLDNKCSVY 174 488999************9*999875 PP == domain 3 score: 8.9 bits; conditional E-value: 0.043 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 ++++f + ++++s Dgt+ +Wd sp|P62881|GNB5_MOUSE 198 LSACSFTNSDMQILTASGDGTCALWD 223 555554444444555544*******9 PP == domain 4 score: 23.7 bits; conditional E-value: 8.9e-07 TEEEEEEESS.SSEEEEE..EETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtsla..fspdgawlasGsdDgtvriWd 38 gq+l+++ GH +v +l+ s g+ ++sG+ D++ ++Wd sp|P62881|GNB5_MOUSE 227 GQLLQSFHGHgADVLCLDlaPSETGNTFVSGGCDKKAMVWD 267 689*******888988888899999999***88*******9 PP == domain 5 score: 29.1 bits; conditional E-value: 1.8e-08 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 gqc++ +++H s+v+s+++ p+g+ +asGsdD t+r++d sp|P62881|GNB5_MOUSE 271 GQCVQAFETHeSDVNSVRYYPSGDAFASGSDDATCRLYD 309 79********999************************98 PP == domain 6 score: 13.0 bits; conditional E-value: 0.0021 EEEEEETTSSEEEEEETTSEEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriWd 38 +s++fs +g++l++G D t+ +Wd sp|P62881|GNB5_MOUSE 329 SSVDFSLSGRLLFAGYNDYTINVWD 353 5899999********99*******9 PP == domain 7 score: 27.2 bits; conditional E-value: 7e-08 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 + +l GH + v+ l++spdg+ ++sGs+D+t+r+W sp|P62881|GNB5_MOUSE 360 VSILFGHeNRVSTLRVSPDGTAFCSGSWDHTLRVW 394 56777**999************************* PP >> sp|O55106|STRN_MOUSE Striatin OS=Mus musculus OX=10090 GN=Strn PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 25.2 0.0 3e-07 2.6e-05 1 38 [] 453 491 .. 453 491 .. 0.93 2 ! 16.5 0.0 0.00016 0.014 2 37 .. 507 543 .. 506 544 .. 0.92 3 ! 23.9 0.1 7.5e-07 6.4e-05 7 38 .] 565 597 .. 559 597 .. 0.89 4 ? 6.2 0.0 0.31 27 12 38 .] 664 692 .. 647 692 .. 0.80 5 ! 33.2 0.0 9e-10 7.7e-08 1 38 [] 696 734 .. 696 734 .. 0.96 6 ! 17.4 0.0 8.9e-05 0.0076 2 32 .. 739 774 .. 738 779 .. 0.85 Alignments for each domain: == domain 1 score: 25.2 bits; conditional E-value: 3e-07 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++ tl+ H +++++laf+p + l+++s+D+t+++W+ sp|O55106|STRN_MOUSE 453 WNPKFTLRSHfDGIRALAFHPIEPVLITASEDHTLKMWN 491 578899****777*************************8 PP == domain 2 score: 16.5 bits; conditional E-value: 0.00016 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 ++++t+++H ++v ++ s++g sG+ Dg + W sp|O55106|STRN_MOUSE 507 EPIYTFRAHkGPVLCVVMSSNGEQCYSGGTDGRIQSW 543 5899*****777****************99****999 PP == domain 3 score: 23.9 bits; conditional E-value: 7.5e-07 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 l GH + v++la+s ++ l+s+s Dgt+r+W+ sp|O55106|STRN_MOUSE 565 LLGHtDAVWGLAYSAAHQRLLSCSADGTLRLWN 597 569*666*************************8 PP == domain 4 score: 6.2 bits; conditional E-value: 0.31 S..EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 s..vtslafspdgawlasGsdDgtvriWd 38 s ++ + +p + +++++D++++++d sp|O55106|STRN_MOUSE 664 ScqINRVISHPTLPISITAHEDRHIKFYD 692 145999999999999899*********98 PP == domain 5 score: 33.2 bits; conditional E-value: 9e-10 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+++++ +H vtsla++p+g +l+sGs D+++r+W+ sp|O55106|STRN_MOUSE 696 GKLIHSMVAHlEAVTSLAVDPNGLYLMSGSHDCSIRLWN 734 68899*****999****************99*******8 PP == domain 6 score: 17.4 bits; conditional E-value: 8.9e-05 EEEEEEESS..SS...EEEEEEETTSSEEEEEETTS CS WD40 2 qclrtltGH..ss...vtslafspdgawlasGsdDg 32 +c++++t+H ++ ++++af+p++ ++as++ D sp|O55106|STRN_MOUSE 739 TCIQEFTAHrkKFeesIHDVAFHPSKCYIASAGADA 774 699******9544999**************998886 PP >> sp|P27612|PLAP_MOUSE Phospholipase A-2-activating protein OS=Mus musculus OX=10090 GN=Plaa PE=1 SV=4 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 11.2 0.0 0.0079 0.68 5 37 .. 12 46 .. 8 46 .. 0.81 2 ! 18.0 0.6 5.5e-05 0.0047 3 37 .. 57 97 .. 55 98 .. 0.89 3 ! 21.6 0.3 4e-06 0.00034 3 37 .. 104 138 .. 103 138 .. 0.90 4 ! 27.1 0.0 7.4e-08 6.4e-06 2 38 .] 142 179 .. 141 179 .. 0.94 5 ! 12.5 0.0 0.0031 0.26 1 37 [. 181 217 .. 181 218 .. 0.88 6 ! 21.5 0.0 4.3e-06 0.00037 1 38 [] 221 259 .. 221 259 .. 0.82 7 ! 12.5 0.1 0.0031 0.27 9 37 .. 271 297 .. 261 298 .. 0.77 Alignments for each domain: == domain 1 score: 11.2 bits; conditional E-value: 0.0079 EEEESS.SS....EEEEEEETTSSEEEEEETTSEEEEE CS WD40 5 rtltGH.ss....vtslafspdgawlasGsdDgtvriW 37 +l GH + v++l p ga++ s s+D+t r+W sp|P27612|PLAP_MOUSE 12 CSLPGHeLDvrglVCCL--YPPGAFV-SVSRDRTTRLW 46 5788**75567788888..******8.5788******* PP == domain 2 score: 18.0 bits; conditional E-value: 5.5e-05 EEEEEESS.SSEEEEEEETTSSE.....EEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw.....lasGsdDgtvriW 37 ++ +GH ++v++++ p+++ +a+G+ D+++ i+ sp|P27612|PLAP_MOUSE 57 EMHCMSGHsNFVSCVCIIPSSDIyphglIATGGNDHNICIF 97 578899**888*****99999999999889********997 PP == domain 3 score: 21.6 bits; conditional E-value: 4e-06 EEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGHss.vtslafspdgawlasGsdDgtvriW 37 +l++l+GH++ v+sl+ + g++l sGs+D t ++W sp|P27612|PLAP_MOUSE 104 PLYILKGHKDtVCSLSSGKFGTLL-SGSWDTTAKVW 138 6899****555****999999998.7********** PP == domain 4 score: 27.1 bits; conditional E-value: 7.4e-08 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +c+ tl GH v++++ p++ ++++Gs D+t+++W+ sp|P27612|PLAP_MOUSE 142 KCMMTLQGHtAAVWAVKILPEQGLMLTGSADKTIKLWK 179 79*******777*************************6 PP == domain 5 score: 12.5 bits; conditional E-value: 0.0031 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 g+c rt+ GH ++v++la ++ +l+ + D ++r W sp|P27612|PLAP_MOUSE 181 GRCERTFLGHeDCVRGLAILSETEFLS-CANDASIRRW 217 6899******888************96.666****988 PP == domain 6 score: 21.5 bits; conditional E-value: 4.3e-06 TEEEEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtsla.fspdgawlasGsdDgtvriWd 38 g+cl ++ GH + ++s++ f+ ++++++ +D+++riW+ sp|P27612|PLAP_MOUSE 221 GECLEVYFGHtNYIYSISvFPNSKDFVT-TAEDRSLRIWK 259 68999*****888*****6666666665.566*******6 PP == domain 7 score: 12.5 bits; conditional E-value: 0.0031 SSSSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 9 GHssvtslafspdgawlasGsdDgtvriW 37 ++ s++++++ +g+ ++ +s Dg +r++ sp|P27612|PLAP_MOUSE 271 AQ-SIWCCCVLENGDIVVGAS-DGIIRVF 297 55.8************99447.*****96 PP >> sp|Q9DC48|PRP17_MOUSE Pre-mRNA-processing factor 17 OS=Mus musculus OX=10090 GN=Cdc40 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 24.4 0.2 5.5e-07 4.7e-05 2 37 .. 279 316 .. 278 317 .. 0.93 2 ! 27.8 0.0 4.6e-08 4e-06 2 38 .] 323 360 .. 322 360 .. 0.94 3 ! 12.0 0.0 0.0045 0.39 2 38 .] 365 404 .. 364 404 .. 0.79 4 ! 14.6 0.0 0.00067 0.058 2 37 .. 409 445 .. 408 446 .. 0.85 5 ? 9.3 0.0 0.032 2.7 16 36 .. 467 487 .. 456 488 .. 0.84 6 ! 19.1 0.0 2.5e-05 0.0021 3 38 .] 498 536 .. 496 536 .. 0.86 7 ! 15.3 1.0 0.0004 0.034 7 38 .] 546 579 .] 540 579 .] 0.73 Alignments for each domain: == domain 1 score: 24.4 bits; conditional E-value: 5.5e-07 EEEEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtsla.fspdgawlasGsdDgtvriW 37 +++++++GH ++v++++ f+ +g++l+s+s+D+++++W sp|Q9DC48|PRP17_MOUSE 279 KQIHVWSGHtKGVSAVRlFPLSGHLLLSCSMDCKIKLW 316 6799*****999*****999999999************ PP == domain 2 score: 27.8 bits; conditional E-value: 4.6e-08 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +clrt+ GH + v++++f+ g+ ++s+ +D+ +++Wd sp|Q9DC48|PRP17_MOUSE 323 RCLRTFIGHsKAVRDICFNTAGTQFLSAAYDRYLKLWD 360 8********888************999999*******9 PP == domain 3 score: 12.0 bits; conditional E-value: 0.0045 EEEEEEESSSSE.EEEEEETTSSE...EEEEETTSEEEEEE CS WD40 2 qclrtltGHssv.tslafspdgaw...lasGsdDgtvriWd 38 qc+ +t v ++++f+pd + +++G+ D+++ Wd sp|Q9DC48|PRP17_MOUSE 365 QCISRFTNR-KVpYCVKFNPDEDKqnlFVAGMSDKKIVQWD 404 566666522.3779************8778*66*******9 PP == domain 4 score: 14.6 bits; conditional E-value: 0.00067 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 + +++++ H + v+ + f ++++ ++s sdD+++r+W sp|Q9DC48|PRP17_MOUSE 409 EIVQEYDRHlGAVNTIVFVDENRRFVSTSDDKSLRVW 445 567889999999*99998888888888899******* PP == domain 5 score: 9.3 bits; conditional E-value: 0.032 EEEETTSSEEEEE.ETTSEEEE CS WD40 16 lafspdgawlasG.sdDgtvri 36 + sp+g+wla + s+D+ + i sp|Q9DC48|PRP17_MOUSE 467 VTLSPNGKWLA-CqSMDNQILI 487 557******97.7699***988 PP == domain 6 score: 19.1 bits; conditional E-value: 2.5e-05 EEEEEESS..SS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH..ss.vtslafspdgawlasGsdDgtvriWd 38 + ++++GH + + ++fspd ++++sG+ +g++ iWd sp|Q9DC48|PRP17_MOUSE 498 KKKIFKGHmvAGyACQVDFSPDMSYVISGDGNGKLNIWD 536 56899***9744589999***********66*******9 PP == domain 7 score: 15.3 bits; conditional E-value: 0.0004 EESSSS..EEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 7 ltGHss..vtslafspdgaw.lasGsdDgtvriWd 38 +++H+ + ++ ++p+ + ++++++Dg +++Wd sp|Q9DC48|PRP17_MOUSE 546 FKAHDKvcIGAV-WHPHETSkVITCGWDGLIKLWD 579 899944235455.7777777678***********9 PP >> sp|Q9ERG2|STRN3_MOUSE Striatin-3 OS=Mus musculus OX=10090 GN=Strn3 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 27.2 0.0 6.9e-08 5.9e-06 1 38 [] 469 507 .. 469 507 .. 0.94 2 ! 15.8 0.0 0.00027 0.023 2 38 .] 523 560 .. 522 560 .. 0.95 3 ! 23.9 0.1 8e-07 6.8e-05 5 38 .] 579 613 .. 576 613 .. 0.91 4 ? 5.0 0.0 0.72 62 12 38 .] 682 708 .. 672 708 .. 0.84 5 ! 34.0 0.1 5.1e-10 4.3e-08 2 38 .] 713 750 .. 712 750 .. 0.94 6 ! 15.8 0.0 0.00028 0.024 2 32 .. 755 790 .. 754 795 .. 0.85 Alignments for each domain: == domain 1 score: 27.2 bits; conditional E-value: 6.9e-08 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++ +tl+ H ++v++laf+p + l+++s+D+t+++W+ sp|Q9ERG2|STRN3_MOUSE 469 WNPKYTLRSHfDGVRALAFHPVEPVLVTASEDHTLKLWN 507 57889*****777*************************8 PP == domain 2 score: 15.8 bits; conditional E-value: 0.00027 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++++t+++H ++v sla s++g +sG+ D t+ W+ sp|Q9ERG2|STRN3_MOUSE 523 EPIYTFRAHiGPVLSLAISSNGEQCFSGGIDATIQWWN 560 5899*******************************998 PP == domain 3 score: 23.9 bits; conditional E-value: 8e-07 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +tl +H + v++la+s ++ l+s+s Dgt+r+W+ sp|Q9ERG2|STRN3_MOUSE 579 GTLVAHtDAVWGLAYSGIKNQLLSCSADGTIRLWN 613 58899*666*************************8 PP == domain 4 score: 5.0 bits; conditional E-value: 0.72 SEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriWd 38 +++ + +p + +++++D++++++d sp|Q9ERG2|STRN3_MOUSE 682 HINRVVSHPTLPVTITAHEDRHIKFFD 708 4899988899899789********998 PP == domain 5 score: 34.0 bits; conditional E-value: 5.1e-10 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + +++ +H + vtsla++p+g +l+sGs D+++r+W+ sp|Q9ERG2|STRN3_MOUSE 713 KMIHSMVAHlDAVTSLAVDPNGIYLMSGSHDCSIRLWN 750 6789999**999****************99*******8 PP == domain 6 score: 15.8 bits; conditional E-value: 0.00028 EEEEEEESS.SS....EEEEEEETTSSEEEEEETTS CS WD40 2 qclrtltGH.ss....vtslafspdgawlasGsdDg 32 +c++++t+H + ++++af+p++a++as++ D sp|Q9ERG2|STRN3_MOUSE 755 TCVQEITAHrKKldesIYDVAFHPSKAYIASAGADA 790 6999*****9667889**************998886 PP >> sp|Q9Z1Z2|STRAP_MOUSE Serine-threonine kinase receptor-associated protein OS=Mus musculus OX=10090 GN=Strap PE=1 SV= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.0 0.0 0.019 1.6 5 33 .. 8 40 .. 4 43 .. 0.84 2 ! 12.5 0.3 0.0031 0.27 4 38 .] 52 87 .. 49 87 .. 0.89 3 ! 20.8 0.0 7.4e-06 0.00063 4 38 .] 94 128 .. 91 128 .. 0.88 4 ! 20.7 0.1 8.2e-06 0.0007 6 38 .] 138 170 .. 134 170 .. 0.78 5 ? 8.5 0.0 0.055 4.7 3 34 .. 216 247 .. 214 251 .. 0.83 6 ! 39.5 0.0 9.3e-12 8e-10 2 37 .. 256 292 .. 255 293 .. 0.93 Alignments for each domain: == domain 1 score: 10.0 bits; conditional E-value: 0.019 EEEESS.SSEEEEE...EETTSSEEEEEETTSE CS WD40 5 rtltGH.ssvtsla...fspdgawlasGsdDgt 33 t++GH +v +la p+g +l+s+++Dg+ sp|Q9Z1Z2|STRAP_MOUSE 8 LTCSGHtRPVVDLAfsgITPYGYFLISACKDGK 40 5789**77799***8888999999*****9996 PP == domain 2 score: 12.5 bits; conditional E-value: 0.0031 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++t+ GH + v++ ++d + a++ D t ++Wd sp|Q9Z1Z2|STRAP_MOUSE 52 IGTFLGHkGAVWGATLNKDATKAATAAADFTAKVWD 87 67999**655*************99988*******9 PP == domain 3 score: 20.8 bits; conditional E-value: 7.4e-06 EEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 l tl +H++ v ++f +d+++l++G+ D+ +ri+d sp|Q9Z1Z2|STRAP_MOUSE 94 LMTL-AHKHiVKTVDFTQDSNYLLTGGQDKLLRIYD 128 6676.898967************************8 PP == domain 4 score: 20.7 bits; conditional E-value: 8.2e-06 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++GH s++ +++d + ++s++ D+tvr+Wd sp|Q9Z1Z2|STRAP_MOUSE 138 EISGHtSGIKKALWCSDDKQILSAD-DKTVRLWD 170 679**888*5555777777777777.*******9 PP == domain 5 score: 8.5 bits; conditional E-value: 0.055 EEEEEESSSSEEEEEEETTSSEEEEEETTSEE CS WD40 3 clrtltGHssvtslafspdgawlasGsdDgtv 34 +++++++ ++s + +p++ +l++G++D ++ sp|Q9Z1Z2|STRAP_MOUSE 216 PIKSFEAPATINSASLHPEKEFLVAGGEDFKL 247 6778887766*****************99876 PP == domain 6 score: 39.5 bits; conditional E-value: 9.3e-12 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 + l +++GH +++++++fspdg + asGs+Dgt+r+W sp|Q9Z1Z2|STRAP_MOUSE 256 EELESYKGHfGPIHCVRFSPDGELYASGSEDGTLRLW 292 67889****888************************* PP >> sp|Q8K450|SPG16_MOUSE Sperm-associated antigen 16 protein OS=Mus musculus OX=10090 GN=Spag16 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 8.4 0.0 0.062 5.3 6 32 .. 355 382 .. 350 386 .. 0.83 2 ! 26.6 2.3 1e-07 9e-06 2 38 .] 393 430 .. 392 430 .. 0.89 3 ! 27.6 2.6 5.3e-08 4.5e-06 1 38 [] 434 472 .. 434 472 .. 0.96 4 ! 28.9 0.0 2.1e-08 1.8e-06 2 38 .] 477 514 .. 476 514 .. 0.95 5 ! 14.3 0.1 0.00083 0.071 1 38 [] 518 556 .. 518 556 .. 0.95 6 ! 25.7 0.2 2.1e-07 1.8e-05 4 37 .. 604 638 .. 602 638 .. 0.94 Alignments for each domain: == domain 1 score: 8.4 bits; conditional E-value: 0.062 EEESS.SSEEEEEEETTSSEEEEEETTS CS WD40 6 tltGH.ssvtslafspdgawlasGsdDg 32 +++ H +v+++ +p ++l+s+s+D+ sp|Q8K450|SPG16_MOUSE 355 IFRLHeLPVSCIVMHPCRDYLISCSEDR 382 56668667*****************998 PP == domain 2 score: 26.6 bits; conditional E-value: 1e-07 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + l t +GH ++ ++++f+p+g+ la++s D t+++Wd sp|Q8K450|SPG16_MOUSE 393 NVLLTGSGHtDWLSGCCFHPSGSKLATSSGDSTIKLWD 430 5677889**7779*************9978*******9 PP == domain 3 score: 27.6 bits; conditional E-value: 5.3e-08 TEEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 g+c+ tl+GH++ v+s+ +++ g+++as+s D t +iWd sp|Q8K450|SPG16_MOUSE 434 GECTLTLEGHNHaVWSCTWHSCGDFVASASLDMTSKIWD 472 689*******888*************************9 PP == domain 4 score: 28.9 bits; conditional E-value: 2.1e-08 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +c +tl GH +sv+s+ f p ++ l+++s D+t+ +Wd sp|Q8K450|SPG16_MOUSE 477 RCRYTLYGHtDSVNSIEFFPFSNILLTASADKTLSVWD 514 7999*****888*************************9 PP == domain 5 score: 14.3 bits; conditional E-value: 0.00083 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+c ++l GH sv++ f p g+ +as++ g ++Wd sp|Q8K450|SPG16_MOUSE 518 GKCEQSLYGHmHSVNDATFTPRGHIIASCDARGVTKLWD 556 6899******999****************99*******8 PP == domain 6 score: 25.7 bits; conditional E-value: 2.1e-07 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +++l GH s v+s+ fs+ g l sG+ Dgt+r+W sp|Q8K450|SPG16_MOUSE 604 IHKLVGHeSEVHSVVFSHLGENLYSGGSDGTIRLW 638 7999***888****************88******* PP >> sp|Q921C3|BRWD1_MOUSE Bromodomain and WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Brwd1 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 25.2 0.5 3e-07 2.6e-05 7 38 .] 183 214 .. 175 214 .. 0.91 2 ! 22.7 0.0 1.8e-06 0.00016 1 37 [. 218 255 .. 218 256 .. 0.92 3 ! 17.4 0.0 8.6e-05 0.0074 3 37 .. 262 301 .. 260 302 .. 0.87 4 ? 6.3 0.0 0.29 25 17 37 .. 331 351 .. 319 351 .. 0.87 5 ! 20.5 0.0 9.4e-06 0.0008 4 37 .. 361 395 .. 358 396 .. 0.89 6 ? 6.1 0.0 0.32 27 13 38 .] 429 454 .. 418 454 .. 0.89 7 ! 15.1 0.1 0.00048 0.041 1 38 [] 458 497 .. 458 497 .. 0.76 8 ? 7.9 0.3 0.086 7.4 7 32 .. 513 536 .. 505 543 .. 0.78 Alignments for each domain: == domain 1 score: 25.2 bits; conditional E-value: 3e-07 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 l GH s v+++af++ g+ +++GsdD+ v+iW+ sp|Q921C3|BRWD1_MOUSE 183 L-GHlSAVYCVAFDRTGHRIFTGSDDCLVKIWS 214 3.9*999*************************5 PP == domain 2 score: 22.7 bits; conditional E-value: 1.8e-06 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 g++l tl+GH ++++a++ +++++a+Gs D+ +r+W sp|Q921C3|BRWD1_MOUSE 218 GRLLSTLRGHsAEISDMAVNYENTLIAAGSCDKIIRVW 255 57899*****555****************99******* PP == domain 3 score: 17.4 bits; conditional E-value: 8.6e-05 EEEEEESS.SSEEEEEEETTSSE.....EEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw.....lasGsdDgtvriW 37 ++ +l GH +s+tsl+fsp + +++G Dgtv +W sp|Q921C3|BRWD1_MOUSE 262 PVAVLQGHtGSITSLQFSPMAKGpqrymVSTGA-DGTVCFW 301 7889****888****99999999****777777.******* PP == domain 4 score: 6.3 bits; conditional E-value: 0.29 EEETTSSEEEEEETTSEEEEE CS WD40 17 afspdgawlasGsdDgtvriW 37 +fs g +la+Gs D+ +r++ sp|Q921C3|BRWD1_MOUSE 331 SFSVGGMFLATGSTDHVIRMY 351 5999999************86 PP == domain 5 score: 20.5 bits; conditional E-value: 9.4e-06 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 + +l+ H + v s++f+ +g+ ++sGs+Dgt riW sp|Q921C3|BRWD1_MOUSE 361 IAELESHtDKVDSIQFCNNGDRFLSGSRDGTARIW 395 678999*555************************* PP == domain 6 score: 6.1 bits; conditional E-value: 0.32 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 vt +a+++d + ++++ D+ +++W+ sp|Q921C3|BRWD1_MOUSE 429 VTMIAWNQDDSTVVTAVNDHVLKVWS 454 77799**********988*******5 PP == domain 7 score: 15.1 bits; conditional E-value: 0.00048 TEEEEEEESS.SSEEEEEEETTSSE..EEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgaw..lasGsdDgtvriWd 38 gq+l+ l GH + v l ++p + l++G+ Dg++ iWd sp|Q921C3|BRWD1_MOUSE 458 GQLLHNLLGHaDEVFVLETHPFDSRimLSAGH-DGSIFIWD 497 6899******6669888866666663234566.*******9 PP == domain 8 score: 7.9 bits; conditional E-value: 0.086 EESSSSEEEEEEETTSSEEEEEETTS CS WD40 7 ltGHssvtslafspdgawlasGsdDg 32 GH+ v +++fs+dg+ +a ++ D sp|Q921C3|BRWD1_MOUSE 513 GQGHGAVFDCKFSQDGQHFA-CT-DS 536 469988************97.65.43 PP >> sp|Q99KP6|PRP19_MOUSE Pre-mRNA-processing factor 19 OS=Mus musculus OX=10090 GN=Prpf19 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 6.5 0.0 0.24 20 13 38 .] 224 250 .. 208 250 .. 0.66 2 ! 28.8 0.0 2.2e-08 1.9e-06 2 38 .] 255 292 .. 254 292 .. 0.94 3 ! 17.9 0.2 6.2e-05 0.0053 2 32 .. 297 328 .. 296 329 .. 0.92 4 ! 16.2 0.1 0.00021 0.018 12 38 .] 352 378 .. 338 378 .. 0.84 5 ! 33.7 0.0 6e-10 5.2e-08 3 38 .] 384 420 .. 382 420 .. 0.92 6 ! 15.1 0.1 0.00047 0.04 3 37 .. 467 502 .. 465 503 .. 0.88 Alignments for each domain: == domain 1 score: 6.5 bits; conditional E-value: 0.24 EEEEE..EETTSSEEEEEETTSEEEEEE CS WD40 13 vtsla..fspdgawlasGsdDgtvriWd 38 + +l+ s+ ++ ++G+ D++v ++d sp|Q99KP6|PRP19_MOUSE 224 ILALDlcPSDTNKI-LTGGADKNVVVFD 250 54444315555555.58999****9998 PP == domain 2 score: 28.8 bits; conditional E-value: 2.2e-08 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 q l tl+GH + vts+ f+p++ +++s+s D t+riW+ sp|Q99KP6|PRP19_MOUSE 255 QILATLKGHtKKVTSVVFHPSQELVFSASPDATIRIWS 292 7799*****988*************************5 PP == domain 3 score: 17.9 bits; conditional E-value: 6.2e-05 EEEEEEESS.SSEEEEEEETTSSEEEEEETTS CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDg 32 +c+++ ++H s vt+l+ + g++l+s+sdD+ sp|Q99KP6|PRP19_MOUSE 297 SCVQVVRAHeSAVTGLSLHATGDYLLSSSDDQ 328 699******888*****************885 PP == domain 4 score: 16.2 bits; conditional E-value: 0.00021 SEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriWd 38 s t+ +f+pdg + +G++D ++iWd sp|Q99KP6|PRP19_MOUSE 352 SLTCAQFHPDGLIFGTGTMDSQIKIWD 378 589**********879999*******9 PP == domain 5 score: 33.7 bits; conditional E-value: 6e-10 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++ + GH +++ts+afs +g +la++ dD +v++Wd sp|Q99KP6|PRP19_MOUSE 384 NVANFPGHsGPITSIAFSENGYYLATAADDSSVKLWD 420 67889***777****************99*******9 PP == domain 6 score: 15.1 bits; conditional E-value: 0.00047 EEEEEESSSSE.EEEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGHssv.tslafspdgawlasGsdDgtvriW 37 + ++t Hs+ t++af ++ +++as ++D++++++ sp|Q99KP6|PRP19_MOUSE 467 EILHFTEHSGLtTGVAFGHHAKFIASTGMDRSLKFY 502 6789****99889***********98888*****98 PP >> sp|A2AHJ4|BRWD3_MOUSE Bromodomain and WD repeat-containing protein 3 OS=Mus musculus OX=10090 GN=Brwd3 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 27.1 0.4 7.3e-08 6.3e-06 6 37 .. 176 207 .. 169 207 .. 0.92 2 ! 22.6 0.0 2e-06 0.00017 1 37 [. 212 249 .. 212 250 .. 0.92 3 ! 16.7 0.1 0.00015 0.013 3 37 .. 256 295 .. 254 296 .. 0.83 4 ? 9.5 0.0 0.028 2.4 13 37 .. 321 345 .. 311 345 .. 0.89 5 ! 18.9 0.0 2.9e-05 0.0025 4 37 .. 355 391 .. 352 392 .. 0.84 6 ! 19.6 0.1 1.8e-05 0.0015 1 38 [] 455 494 .. 455 494 .. 0.71 7 ! 11.3 0.2 0.0073 0.62 7 32 .. 510 533 .. 503 540 .. 0.80 Alignments for each domain: == domain 1 score: 27.1 bits; conditional E-value: 7.3e-08 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriW 37 +l GH ssv+++af+++g+ +++GsdD+ v+iW sp|A2AHJ4|BRWD3_MOUSE 176 IL-GHlSSVYCVAFDRSGRRIFTGSDDCLVKIW 207 34.9***************************** PP == domain 2 score: 22.6 bits; conditional E-value: 2e-06 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 g++l tl+GH ++++a++ +++++a+Gs D+ vr+W sp|A2AHJ4|BRWD3_MOUSE 212 GRLLATLRGHsAEISDMAVNYENTLIAAGSCDKVVRVW 249 57899*****555****************99******* PP == domain 3 score: 16.7 bits; conditional E-value: 0.00015 EEEEEESS.SSEEEEEEETTSSE....EEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw....lasGsdDgtvriW 37 ++ +l GH s+ts++f+p+ + l+s + Dgt+ +W sp|A2AHJ4|BRWD3_MOUSE 256 PVAVLQGHsASITSIQFCPSTKGttryLTSTGADGTICFW 295 7889****777****988887778888986666******* PP == domain 4 score: 9.5 bits; conditional E-value: 0.028 EEEEEEETTSSEEEEEETTSEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriW 37 +++ +fs+ g ++++Gs D+ +ri+ sp|A2AHJ4|BRWD3_MOUSE 321 ISCSSFSSGGMFITTGSTDHVIRIY 345 67778******************97 PP == domain 5 score: 18.9 bits; conditional E-value: 2.9e-05 EEEEESS.SSEEEEEEETTSSEE..EEEETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawl..asGsdDgtvriW 37 + +l+ H + v +++f+ +g+ l +sGs+Dgt riW sp|A2AHJ4|BRWD3_MOUSE 355 IAELESHtDKVVAVQFCNNGDSLrfVSGSRDGTARIW 391 678999*55599***9******6559*********** PP == domain 6 score: 19.6 bits; conditional E-value: 1.8e-05 TEEEEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtsla.fspdgawlasGsdDgtvriWd 38 gq+l+tl+GH + v l + d++ ++s++ Dg++ iWd sp|A2AHJ4|BRWD3_MOUSE 455 GQLLHTLSGHdDEVFVLEaHPFDQRIILSAGHDGNIFIWD 494 799*******5557666633555555556555*******9 PP == domain 7 score: 11.3 bits; conditional E-value: 0.0073 EESSSSEEEEEEETTSSEEEEEETTS CS WD40 7 ltGHssvtslafspdgawlasGsdDg 32 GH+ v +++fspdg+ +a ++ D sp|A2AHJ4|BRWD3_MOUSE 510 GQGHGAVFDCKFSPDGNHFA-CT-DS 533 569988************97.66.54 PP >> sp|P58404|STRN4_MOUSE Striatin-4 OS=Mus musculus OX=10090 GN=Strn4 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 26.3 0.1 1.4e-07 1.2e-05 1 38 [] 435 473 .. 435 473 .. 0.94 2 ? 9.6 0.0 0.026 2.3 2 38 .] 489 526 .. 488 526 .. 0.94 3 ! 39.6 0.4 8.7e-12 7.4e-10 4 38 .] 544 579 .. 541 579 .. 0.92 4 ? 3.6 0.0 2 1.7e+02 12 36 .. 643 670 .. 630 672 .. 0.79 5 ! 33.3 0.4 8e-10 6.9e-08 1 38 [] 676 714 .. 676 714 .. 0.94 6 ! 12.4 0.0 0.0034 0.29 2 32 .. 719 754 .. 718 759 .. 0.85 Alignments for each domain: == domain 1 score: 26.3 bits; conditional E-value: 1.4e-07 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++ tl+ H ++++slaf+++++ l+++s+Dgt+++W+ sp|P58404|STRN4_MOUSE 435 WNPKFTLRSHyDGIRSLAFHHSQSALLTASEDGTLKLWN 473 578899****999*************************8 PP == domain 2 score: 9.6 bits; conditional E-value: 0.026 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++++ +++H ++v ++ +++ + sG+ D ++ W+ sp|P58404|STRN4_MOUSE 489 EPIHAFRAHrGPVLAVTMGSNSEYCYSGGADARIHSWK 526 5899*****999**********************9995 PP == domain 3 score: 39.6 bits; conditional E-value: 8.7e-12 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++l+GH + v++lafsp ++ las+s DgtvriWd sp|P58404|STRN4_MOUSE 544 SHVLEGHgDAVWGLAFSPTSQRLASCSADGTVRIWD 579 699****666*************************9 PP == domain 4 score: 3.6 bits; conditional E-value: 2 S...EEEEEEETTSSEEEEEETTSEEEE CS WD40 12 s...vtslafspdgawlasGsdDgtvri 36 + ++ + +p++++ ++++dD+ +r+ sp|P58404|STRN4_MOUSE 643 GpaqINQVVSHPSQPLTITAHDDRGIRF 670 2366999*********889*****9996 PP == domain 5 score: 33.3 bits; conditional E-value: 8e-10 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g+ +++ +H + vt+la++p+g +l+sGs D+++r+W+ sp|P58404|STRN4_MOUSE 676 GKSVHSMVAHlDAVTCLAVDPNGVFLMSGSHDCSLRLWS 714 5789999***999****************99*******5 PP == domain 6 score: 12.4 bits; conditional E-value: 0.0034 EEEEEEESS..SS...EEEEEEETTSSEEEEEETTS CS WD40 2 qclrtltGH..ss...vtslafspdgawlasGsdDg 32 +c++++t+H ++ ++++a +p++a++as++ D sp|P58404|STRN4_MOUSE 719 TCVQEITAHrkKHeeaIHAVACHPSKALIASAGADA 754 699999***9655999**************998886 PP >> sp|Q6ZPG2|WDR90_MOUSE WD repeat-containing protein 90 OS=Mus musculus OX=10090 GN=Wdr90 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 2.7 0.0 4 3.4e+02 4 28 .. 464 489 .. 462 501 .. 0.71 2 ? 6.7 0.2 0.2 18 10 33 .. 516 538 .. 505 540 .. 0.75 3 ? 2.4 0.0 4.9 4.2e+02 13 37 .. 569 593 .. 559 594 .. 0.67 4 ? 5.4 0.0 0.52 45 14 37 .. 685 706 .. 671 706 .. 0.75 5 ? 5.7 0.1 0.43 37 10 28 .. 719 738 .. 712 745 .. 0.80 6 ! 12.9 0.0 0.0023 0.19 8 38 .] 759 790 .. 750 790 .. 0.88 7 ? 3.1 0.1 2.9 2.5e+02 9 35 .. 844 871 .. 835 874 .. 0.74 8 ? 9.7 0.1 0.023 2 13 38 .] 993 1017 .. 974 1017 .. 0.75 9 ? 7.8 0.1 0.094 8 5 31 .. 1027 1053 .. 1025 1059 .. 0.79 10 ! 11.9 0.2 0.0047 0.4 4 38 .] 1275 1316 .. 1272 1316 .. 0.79 11 ! 14.4 0.0 0.00076 0.066 3 38 .] 1322 1360 .. 1320 1360 .. 0.81 12 ? 2.8 0.0 3.7 3.1e+02 22 38 .] 1435 1451 .. 1417 1451 .. 0.81 13 ! 22.1 0.2 2.9e-06 0.00024 5 38 .] 1555 1589 .. 1551 1589 .. 0.90 14 ? 4.5 0.0 1.1 91 24 37 .. 1617 1636 .. 1601 1637 .. 0.65 15 ? 10.7 0.0 0.012 0.99 10 34 .. 1650 1675 .. 1643 1677 .. 0.84 16 ? 4.6 0.0 0.99 85 22 37 .. 1716 1730 .. 1684 1731 .. 0.69 17 ? 6.3 0.0 0.28 24 7 37 .. 1839 1869 .. 1835 1870 .. 0.83 Alignments for each domain: == domain 1 score: 2.7 bits; conditional E-value: 4 EEEEESS.SSEEEEEEETTSSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasG 28 +r + GH + v++la + + ++las+ sp|Q6ZPG2|WDR90_MOUSE 464 QRFFLGHtDKVSALALNGSDTLLASA 489 66788**555****999999999875 PP == domain 2 score: 6.7 bits; conditional E-value: 0.2 SSSEEEEEEETTSSEEEEE.ETTSE CS WD40 10 HssvtslafspdgawlasG.sdDgt 33 H ++sl+fs +ga+l +G ++D++ sp|Q6ZPG2|WDR90_MOUSE 516 H-TICSLSFSGSGALL-CGvGKDRH 538 4.6************9.58789987 PP == domain 3 score: 2.4 bits; conditional E-value: 4.9 EEEEE..EETTSSEEEEEETTSEEEEE CS WD40 13 vtsla..fspdgawlasGsdDgtvriW 37 +++++ f ++ ++ as++ g+vr+W sp|Q6ZPG2|WDR90_MOUSE 569 IRAFQvaFFDETRM-ASCG-RGSVRLW 593 64443426666666.899*.******* PP == domain 4 score: 5.4 bits; conditional E-value: 0.52 EEEEEETTSSEEEEEETTSEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriW 37 +sl s + a a Gs+Dg +r+W sp|Q6ZPG2|WDR90_MOUSE 685 SSL--SVSTATCAVGSEDGYLRLW 706 455..556666778********** PP == domain 5 score: 5.7 bits; conditional E-value: 0.43 S.SSEEEEEEETTSSEEEEE CS WD40 10 H.ssvtslafspdgawlasG 28 H ++v+s++fspdg ++s sp|Q6ZPG2|WDR90_MOUSE 719 HdGPVSSVSFSPDGLRVLST 738 8777**********998764 PP == domain 6 score: 12.9 bits; conditional E-value: 0.0023 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 + H +v +l++ p+ +a+ s D+tvriWd sp|Q6ZPG2|WDR90_MOUSE 759 RSHmAPVLALSTEPNRGQMATVSLDHTVRIWD 790 479999**************99*********9 PP == domain 7 score: 3.1 bits; conditional E-value: 2.9 SS.SSEEEEEEETTSSEEEEEETTSEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvr 35 H + +tsl dg++l+s++ g++ sp|Q6ZPG2|WDR90_MOUSE 844 RHrGAITSLVITLDGRFLFSSCSQGSLV 871 46666************98654488875 PP == domain 8 score: 9.7 bits; conditional E-value: 0.023 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 +sla s d ++l++++ D+t+ +Wd sp|Q6ZPG2|WDR90_MOUSE 993 CCSLALSEDAHLLLAAT-DRTITVWD 1017 46888*********999.*******9 PP == domain 9 score: 7.8 bits; conditional E-value: 0.094 EEEESS.SSEEEEEEETTSSEEEEEETT CS WD40 5 rtltGH.ssvtslafspdgawlasGsdD 31 +++ GH +v+++af pd+ ++s + D sp|Q6ZPG2|WDR90_MOUSE 1027 QVYIGHsEPVHAVAFTPDQLQVISVG-D 1053 5799**777**********9998655.3 PP == domain 10 score: 11.9 bits; conditional E-value: 0.0047 EEEEESS.SSEEEEEEETTSSEEEEEET......TSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsd......DgtvriWd 38 +r++ GH + ++ la ++dg+ las+s + +riWd sp|Q6ZPG2|WDR90_MOUSE 1275 QRHWLGHsQEISTLALNQDGQILASASCcgntaaRCQIRIWD 1316 78999**666*************97542233445*******9 PP == domain 11 score: 14.4 bits; conditional E-value: 0.00076 EEEEEESS.SSEEEEEEETTSSEEEE.E.ETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlas.G.sdDgtvriWd 38 c + l+ H + v +lafspd +l++ G D+++ +W+ sp|Q6ZPG2|WDR90_MOUSE 1322 CRHLLSHHdTAVQALAFSPDDEFLVTlGdYADRNLALWS 1360 66778888766*************9856324****9995 PP == domain 12 score: 2.8 bits; conditional E-value: 3.7 SSEEEEEETTSEEEEEE CS WD40 22 gawlasGsdDgtvriWd 38 +++l +Gs g v +Wd sp|Q6ZPG2|WDR90_MOUSE 1435 SPLLYCGSSSGQVCVWD 1451 456899*88*******9 PP == domain 13 score: 22.1 bits; conditional E-value: 2.9e-06 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 r ++GH + v+ + fsp + a++++Dg+vr+W+ sp|Q6ZPG2|WDR90_MOUSE 1555 RLISGHrTKVNEVVFSPGESHCATCGEDGSVRVWS 1589 5578**988*************************5 PP == domain 14 score: 4.5 bits; conditional E-value: 1.1 E......EEEEETTSEEEEE CS WD40 24 w......lasGsdDgtvriW 37 +++G Dgt+r++ sp|Q6ZPG2|WDR90_MOUSE 1617 ElpeqqqVVAGYSDGTLRVF 1636 2344444899*55*****97 PP == domain 15 score: 10.7 bits; conditional E-value: 0.012 S.SSEEEEEEETTSSEEEEEETTSEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtv 34 H + t++afs dg+ ++sG++Dg v sp|Q6ZPG2|WDR90_MOUSE 1650 HrTALTAIAFSTDGQTILSGDKDGLV 1675 66669******************987 PP == domain 16 score: 4.6 bits; conditional E-value: 0.99 SSEEEEEETTSEEEEE CS WD40 22 gawlasGsdDgtvriW 37 wla+++ D+ v iW sp|Q6ZPG2|WDR90_MOUSE 1716 ELWLAASG-DQRVSIW 1730 458*9999.******* PP == domain 17 score: 6.3 bits; conditional E-value: 0.28 EESS.SSEEEEE.EETTSSEEEEEETTSEEEEE CS WD40 7 ltGH.ssvtsla.fspdgawlasGsdDgtvriW 37 l+GH +sv +l+ f p+g++l+++ + + +W sp|Q6ZPG2|WDR90_MOUSE 1839 LEGHdDSV-HLCrFTPSGRLLFTAA-HNEILVW 1869 89**877*.6666*********998.8888888 PP >> sp|Q91WG4|ELP2_MOUSE Elongator complex protein 2 OS=Mus musculus OX=10090 GN=Elp2 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 13.7 0.1 0.0013 0.11 5 37 .. 52 90 .. 48 91 .. 0.77 2 ! 14.0 0.0 0.001 0.087 7 38 .] 103 143 .. 95 143 .. 0.65 3 ? 4.3 0.0 1.2 1e+02 15 37 .. 166 190 .. 150 190 .. 0.69 4 ! 16.7 0.2 0.00015 0.012 6 37 .. 202 236 .. 197 237 .. 0.83 5 ! 11.1 0.0 0.0083 0.71 5 37 .. 276 318 .. 273 318 .. 0.78 6 ! 15.3 0.0 0.00041 0.035 5 36 .. 381 413 .. 377 415 .. 0.87 7 ? 6.2 0.0 0.29 25 4 29 .. 560 586 .. 557 593 .. 0.83 8 ! 16.2 0.1 0.00021 0.018 2 38 .] 605 642 .. 604 642 .. 0.87 9 ! 23.9 1.4 7.8e-07 6.7e-05 7 37 .. 665 696 .. 660 696 .. 0.88 10 ? 7.3 0.3 0.14 12 24 37 .. 809 824 .. 766 825 .. 0.78 Alignments for each domain: == domain 1 score: 13.7 bits; conditional E-value: 0.0013 EEEESS.SSEEEEE......EETTSSEEEEEETTSEEEEE CS WD40 5 rtltGH.ssvtsla......fspdgawlasGsdDgtvriW 37 + l GH v++l+ sp++ ++ sG+ D+ v W sp|Q91WG4|ELP2_MOUSE 52 TNLNGHtARVNCLQwirtedGSPSNELV-SGGSDNRVIHW 90 5689**666****888888888888886.67559999888 PP == domain 2 score: 14.0 bits; conditional E-value: 0.001 EESS.SSEEEEE......EETTSSE.......EEEE.ETTSEEEEEE CS WD40 7 ltGH.ssvtsla......fspdgaw.......lasG.sdDgtvriWd 38 l GH ++v+++ +as+ s D tvriW+ sp|Q91WG4|ELP2_MOUSE 103 LQGHeGPVCAVHaiyqsgP-----SegeqhalIASAaS-DSTVRIWS 143 56**888998867555531.....24444565666636.*******5 PP == domain 3 score: 4.3 bits; conditional E-value: 1.2 EEEEETTSSE..EEEEETTSEEEEE CS WD40 15 slafspdgaw..lasGsdDgtvriW 37 +la p + la+G+dD+ ++++ sp|Q91WG4|ELP2_MOUSE 166 CLAILPGTNVpvLACGDDDCRIHLY 190 6666666666758999999999886 PP == domain 4 score: 16.7 bits; conditional E-value: 0.00015 EEESS.SSEEEEEEETTSSE........EEEEETTSEEEEE CS WD40 6 tltGH.ssvtslafspdgaw........lasGsdDgtvriW 37 +l GH ++++++ w las+s D+ +riW sp|Q91WG4|ELP2_MOUSE 202 SLCGHeDWIRGV------EWatfgrdlfLASCSQDCLIRIW 236 678**888****......777777778789*********** PP == domain 5 score: 11.1 bits; conditional E-value: 0.0083 EEEESS.SSEEEEE....EETTSSE.........EEEEETTSEEEEE CS WD40 5 rtltGH.ssvtsla....fspdgaw.........lasGsdDgtvriW 37 ++l GH ++v+++ f l+s+s+D+t +W sp|Q91WG4|ELP2_MOUSE 276 TVLAGHeNWVNAVHwqpsFY----KdgvlqqpvrLLSASMDKTMILW 318 5688**999****6444444....26666*****889999****999 PP == domain 6 score: 15.3 bits; conditional E-value: 0.00041 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvri 36 +++GH ++v +l ++p+g ++++ s D+t r+ sp|Q91WG4|ELP2_MOUSE 381 IVISGHfDGVQDLMWDPEGEFIITTSTDQTTRL 413 5789**777*************99888***998 PP == domain 7 score: 6.2 bits; conditional E-value: 0.29 EEEEESSSS.EEEEEEETTSSEEEEEE CS WD40 4 lrtltGHss.vtslafspdgawlasGs 29 +++l GH+ + ++a + ++++las++ sp|Q91WG4|ELP2_MOUSE 560 IQKLYGHGYeIVCVACNNSKTLLASAC 586 57788**44699***********9976 PP == domain 8 score: 16.2 bits; conditional E-value: 0.00021 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++++l H vt + fspd ++l++ s+D+t +W+ sp|Q91WG4|ELP2_MOUSE 605 KQVQSLAFHtLTVTQMTFSPDDKFLLAVSRDRTWSLWK 642 678888889555**************99*********6 PP == domain 9 score: 23.9 bits; conditional E-value: 7.8e-07 EESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 7 ltGHss.vtslafspdgawlasGsdDgtvriW 37 + Hs ++s+++spd++++++Gs+D++v +W sp|Q91WG4|ELP2_MOUSE 665 TSVHSRiIWSCDWSPDNKYFFTGSRDKKVVVW 696 46796667************************ PP == domain 10 score: 7.3 bits; conditional E-value: 0.14 E..EEEEETTSEEEEE CS WD40 24 w..lasGsdDgtvriW 37 w +as+++D+tv+i+ sp|Q91WG4|ELP2_MOUSE 809 WlhFASCGEDHTVKIY 824 4445999********8 PP >> sp|Q9DCJ1|LST8_MOUSE Target of rapamycin complex subunit LST8 OS=Mus musculus OX=10090 GN=Mlst8 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.9 0.0 0.02 1.7 24 37 .. 14 27 .. 8 28 .. 0.82 2 ! 13.3 0.0 0.0017 0.15 3 38 .] 34 69 .. 32 69 .. 0.86 3 ! 23.2 0.1 1.3e-06 0.00011 6 38 .] 80 113 .. 75 113 .. 0.82 4 ! 20.8 0.0 7.6e-06 0.00065 2 38 .] 120 156 .. 119 156 .. 0.96 5 ? 5.1 0.0 0.68 58 11 38 .] 171 198 .. 161 198 .. 0.85 6 ! 23.7 0.0 8.6e-07 7.4e-05 15 37 .. 225 247 .. 205 248 .. 0.83 7 ! 13.3 0.6 0.0017 0.15 14 37 .. 274 297 .. 260 298 .. 0.88 8 ? 6.7 0.0 0.22 19 3 20 .. 304 322 .. 302 323 .. 0.83 Alignments for each domain: == domain 1 score: 9.9 bits; conditional E-value: 0.02 EEEEEETTSEEEEE CS WD40 24 wlasGsdDgtvriW 37 la++++D+tvr+W sp|Q9DCJ1|LST8_MOUSE 14 ILATAGYDHTVRFW 27 5788888******* PP == domain 2 score: 13.3 bits; conditional E-value: 0.0017 EEEEEESS..SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH..ssvtslafspdgawlasGsdDgtvriWd 38 c+rt H s v++l pd +++a+++ +++r++d sp|Q9DCJ1|LST8_MOUSE 34 CTRTVQ-HqdSQVNALEITPDRSMIAAAG-YQHIRMYD 69 788875.75444**************99*.******98 PP == domain 3 score: 23.2 bits; conditional E-value: 1.3e-06 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++G +++ s+ f+ dg+w+ +G++D+t riWd sp|Q9DCJ1|LST8_MOUSE 80 SYDGVsKNIASVGFHEDGRWMYTGGEDCTARIWD 113 5555545588999********************9 PP == domain 4 score: 20.8 bits; conditional E-value: 7.6e-06 EEEEEEESSSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGHssvtslafspdgawlasGsdDgtvriWd 38 qc+r++ ++++++ +p++a l+ G+ g ++iWd sp|Q9DCJ1|LST8_MOUSE 120 QCQRIFQVNAPINCVCLHPNQAELIVGDQSGAIHIWD 156 8******9999*************************9 PP == domain 5 score: 5.1 bits; conditional E-value: 0.68 SSEEEEEEETTSSEEEEE.ETTSEEEEEE CS WD40 11 ssvtslafspdgawlasG.sdDgtvriWd 38 ss+ts +pd +++a+ s g++++W+ sp|Q9DCJ1|LST8_MOUSE 171 SSITSAHIDPDASYMAAVnS-AGNCYVWN 198 5699**********997766.99999998 PP == domain 6 score: 23.7 bits; conditional E-value: 8.6e-07 EEEEETTSSEEEEEETTSEEEEE CS WD40 15 slafspdgawlasGsdDgtvriW 37 ++fspd+++la++s D+t++iW sp|Q9DCJ1|LST8_MOUSE 225 QCRFSPDSTLLATCSADQTCKIW 247 456******************** PP == domain 7 score: 13.3 bits; conditional E-value: 0.0017 EEEEEETTSSEEEEEETTSEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriW 37 +++afs d+++++++s D+ r+W sp|Q9DCJ1|LST8_MOUSE 274 WGCAFSGDSQYIVTASSDNLARLW 297 799**********9988******* PP == domain 8 score: 6.7 bits; conditional E-value: 0.22 EEEEEESS.SSEEEEEEET CS WD40 3 clrtltGH.ssvtslafsp 20 r++ GH + v +laf++ sp|Q9DCJ1|LST8_MOUSE 304 IKREYGGHqKAVVCLAFND 322 6789****99999**9976 PP >> sp|Q9JJA4|WDR12_MOUSE Ribosome biogenesis protein WDR12 OS=Mus musculus OX=10090 GN=Wdr12 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 12.6 0.3 0.0029 0.25 12 38 .] 103 127 .. 95 127 .. 0.78 2 ! 15.3 0.2 0.00039 0.033 2 37 .. 131 170 .. 130 171 .. 0.76 3 ! 24.4 1.3 5.4e-07 4.6e-05 3 38 .] 181 217 .. 179 217 .. 0.94 4 ! 25.4 0.6 2.6e-07 2.2e-05 2 38 .] 248 284 .. 247 284 .. 0.85 5 ! 24.1 0.1 6.7e-07 5.8e-05 5 38 .] 292 325 .. 288 325 .. 0.91 6 ! 23.9 1.0 8e-07 6.8e-05 6 38 .] 337 371 .. 334 371 .. 0.92 7 ? 9.2 0.0 0.033 2.9 3 35 .. 378 410 .. 376 413 .. 0.81 Alignments for each domain: == domain 1 score: 12.6 bits; conditional E-value: 0.0029 SEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriWd 38 +++s+ w++sGs+D+t riW+ sp|Q9JJA4|WDR12_MOUSE 103 WISSI--EGAEEWILSGSYDKTSRIWS 127 46666..566789*************5 PP == domain 2 score: 15.3 bits; conditional E-value: 0.00039 EEEEEEESSSS.EEEEEEETTSSE...EEEEETTSEEEEE CS WD40 2 qclrtltGHss.vtslafspdgaw...lasGsdDgtvriW 37 + + t+ GH++ v ++a+ + ++ l+++s+D+tv +W sp|Q9JJA4|WDR12_MOUSE 131 KSIMTIVGHTDvVKDVAWVKKDSLsclLLTASMDQTVLLW 170 6678889**885699955555555887789999******* PP == domain 3 score: 24.4 bits; conditional E-value: 5.4e-07 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 l+ ++GH +sv ++a++++ga ++sGs+D+ ++iW+ sp|Q9JJA4|WDR12_MOUSE 181 ALHCCRGHaGSVDAIAVDSSGAKFCSGSWDKMLKIWS 217 58999***999*************************5 PP == domain 4 score: 25.4 bits; conditional E-value: 2.6e-07 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++l tl+GH ++s+ +s+ +s+s+D+t+r+Wd sp|Q9JJA4|WDR12_MOUSE 248 TPLVTLSGHtEAISSVLWSDAEEI-CSASWDHTIRVWD 284 57889****777****77777777.789*********9 PP == domain 5 score: 24.1 bits; conditional E-value: 6.7e-07 EEEESSSSE.EEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGHssv.tslafspdgawlasGsdDgtvriWd 38 tltG v +++++sp + lasGs D+++r+Wd sp|Q9JJA4|WDR12_MOUSE 292 STLTGN-KVfNCISYSPLCKRLASGSTDRHIRLWD 325 678999.688************************9 PP == domain 6 score: 23.9 bits; conditional E-value: 8e-07 EEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 +lt H ++vts+++sp + l+sGs D+ v++Wd sp|Q9JJA4|WDR12_MOUSE 337 SLTSHtGWVTSVKWSPTHEQqLISGSLDNIVKLWD 371 6899*888************999***********9 PP == domain 7 score: 9.2 bits; conditional E-value: 0.033 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvr 35 +l+ l +H + v s+++ + g +l sG+ D++++ sp|Q9JJA4|WDR12_MOUSE 378 PLYDLAAHeDKVLSVDWTDTGLLL-SGGADNKLY 410 6777889*666****999999997.7998*9875 PP >> sp|Q99LC2|CSTF1_MOUSE Cleavage stimulation factor subunit 1 OS=Mus musculus OX=10090 GN=Cstf1 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 12.9 0.0 0.0024 0.2 8 36 .. 105 134 .. 98 136 .. 0.82 2 ! 28.3 0.0 3e-08 2.6e-06 4 38 .] 166 201 .. 164 201 .. 0.94 3 ? 10.8 0.0 0.01 0.89 14 38 .] 221 245 .. 213 245 .. 0.93 4 ! 21.7 0.2 4e-06 0.00034 9 38 .] 260 290 .. 249 290 .. 0.85 5 ! 19.0 0.0 2.8e-05 0.0024 2 37 .. 295 333 .. 294 334 .. 0.87 6 ! 15.5 0.0 0.00035 0.03 3 37 .. 390 424 .. 388 424 .. 0.86 Alignments for each domain: == domain 1 score: 12.9 bits; conditional E-value: 0.0024 ESSSSEEEEE.EETTSSEEEEEETTSEEEE CS WD40 8 tGHssvtsla.fspdgawlasGsdDgtvri 36 t H++ + +a +s+dg+++a+Gs D +++i sp|Q99LC2|CSTF1_MOUSE 105 TSHKGPCRVAtYSRDGQLIATGSADASIKI 134 467555677789*****************9 PP == domain 2 score: 28.3 bits; conditional E-value: 3e-08 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +rtl H + vt+laf+p + lasGs+D t++++d sp|Q99LC2|CSTF1_MOUSE 166 IRTLYDHvDEVTCLAFHPTEQILASGSRDYTLKLFD 201 689999*888************************98 PP == domain 3 score: 10.8 bits; conditional E-value: 0.01 EEEEEETTSSEEEEEETTSEEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriWd 38 +s++f+p+g++++ G+ +t+r++d sp|Q99LC2|CSTF1_MOUSE 221 RSISFHPSGDFILVGTQHPTLRLYD 245 699********************98 PP == domain 4 score: 21.7 bits; conditional E-value: 4e-06 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 H + ++s+ ++p+ ++ ++Gs+Dg +++Wd sp|Q99LC2|CSTF1_MOUSE 260 QHtDAICSVNYNPSANMYVTGSKDGCIKLWD 290 68555************99***********9 PP == domain 5 score: 19.0 bits; conditional E-value: 2.8e-05 EEEEEEE.SSSS..EEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtlt.GHss..vtslafspdgawlasGsdDgtvriW 37 +c++t++ +H++ v+s fs+++++++s+++D ++W sp|Q99LC2|CSTF1_MOUSE 295 RCITTFEkAHDGaeVCSAIFSKNSKYILSSGKDSVAKLW 333 69999955**3358*9999******************** PP == domain 6 score: 15.5 bits; conditional E-value: 0.00035 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +l +l GH + v+++ sp ++ ++++sdD r+W sp|Q99LC2|CSTF1_MOUSE 390 NLLSL-GHnNIVRCIVHSPTNPGFMTCSDDFRARFW 424 55566.9*4558***********************9 PP >> sp|O54927|WSB1_MOUSE WD repeat and SOCS box-containing protein 1 OS=Mus musculus OX=10090 GN=Wsb1 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.7 0.1 0.024 2.1 17 38 .] 128 156 .. 96 156 .. 0.73 2 ! 24.4 0.0 5.3e-07 4.5e-05 3 38 .] 162 199 .. 160 199 .. 0.81 3 ! 21.0 0.1 6.3e-06 0.00054 2 38 .] 205 242 .. 204 242 .. 0.91 4 ! 32.2 0.1 1.9e-09 1.6e-07 4 38 .] 249 284 .. 246 284 .. 0.92 5 ! 15.0 0.0 0.00049 0.042 11 37 .. 310 338 .. 289 339 .. 0.80 6 ! 17.5 0.2 8.2e-05 0.0071 15 37 .. 356 378 .. 349 378 .. 0.94 Alignments for each domain: == domain 1 score: 9.7 bits; conditional E-value: 0.024 E.......EETTSSEEEEEETTSEEEEEE CS WD40 17 a.......fspdgawlasGsdDgtvriWd 38 f +d+ +la+G +g ++iWd sp|O54927|WSB1_MOUSE 128 NiewhrfrFGQDQLLLATGLNNGRIKIWD 156 155555558889999****77*******9 PP == domain 2 score: 24.4 bits; conditional E-value: 5.3e-07 EEEEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 +l l H v++l f pdg++l+ s+s+D+t+r+Wd sp|O54927|WSB1_MOUSE 162 LLLNLVDHiEMVRDLTFAPDGSLLLvSASRDKTLRVWD 199 556666785559***********75388*********9 PP == domain 3 score: 21.0 bits; conditional E-value: 6.3e-06 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + +++l++H ++v+s+afspd ++l+s + + v +W+ sp|O54927|WSB1_MOUSE 205 NMVKVLRAHqNWVYSCAFSPDCSMLCSVGASKAVFLWN 242 67899****999*************98777*******8 PP == domain 4 score: 32.2 bits; conditional E-value: 1.9e-09 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +r+l+GH +v +++fspdga+la++s+D v++Wd sp|O54927|WSB1_MOUSE 249 IRKLEGHhHDVVACDFSPDGALLATASYDTRVYVWD 284 6899***77799***********************9 PP == domain 5 score: 15.0 bits; conditional E-value: 0.00049 SS..EEEEEEETTSSEEEEEETTSEEEEE CS WD40 11 ss..vtslafspdgawlasGsdDgtvriW 37 ++ v++++fs+dg +as dD+ vr+W sp|O54927|WSB1_MOUSE 310 NDrwVRAVSFSHDGLHVASLADDKMVRFW 338 44679***********985488******* PP == domain 6 score: 17.5 bits; conditional E-value: 8.2e-05 EEEEETTSSEEEEEETTSEEEEE CS WD40 15 slafspdgawlasGsdDgtvriW 37 ++afs dg+ la+G+ Dg+v++W sp|O54927|WSB1_MOUSE 356 CCAFSTDGSVLAAGTHDGSVYFW 378 999***********88******* PP >> sp|Q8VDD9|PHIP_MOUSE PH-interacting protein OS=Mus musculus OX=10090 GN=Phip PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 24.6 0.1 4.8e-07 4.1e-05 6 37 .. 179 210 .. 173 210 .. 0.92 2 ! 21.1 0.0 5.9e-06 0.00051 1 37 [. 215 252 .. 215 253 .. 0.93 3 ! 17.8 0.2 6.7e-05 0.0057 3 37 .. 259 298 .. 257 298 .. 0.86 4 ? 8.5 0.0 0.057 4.9 17 37 .. 328 348 .. 319 348 .. 0.88 5 ! 19.5 0.0 1.9e-05 0.0016 4 37 .. 358 392 .. 355 393 .. 0.88 6 ? 3.3 0.0 2.5 2.1e+02 13 38 .] 427 452 .. 414 452 .. 0.88 7 ! 12.6 0.0 0.0029 0.25 1 38 [] 456 495 .. 456 495 .. 0.81 8 ? 7.6 0.2 0.11 9.2 7 32 .. 511 534 .. 501 541 .. 0.78 Alignments for each domain: == domain 1 score: 24.6 bits; conditional E-value: 4.8e-07 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriW 37 +l GH ssv+++ f++ g+ +++GsdD+ v+iW sp|Q8VDD9|PHIP_MOUSE 179 IL-GHlSSVYCVTFDRTGRRIFTGSDDCLVKIW 210 44.9***************************** PP == domain 2 score: 21.1 bits; conditional E-value: 5.9e-06 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 g++l tl+GH ++++a++ +++++a+Gs D+ +r+W sp|Q8VDD9|PHIP_MOUSE 215 GRLLATLRGHaAEISDMAVNYENTMIAAGSCDKMIRVW 252 57899*****777****************99******* PP == domain 3 score: 17.8 bits; conditional E-value: 6.7e-05 EEEEEESS.SSEEEEE....EETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtsla....fspdgawlasGsdDgtvriW 37 +l +l GH s+tsl+ s ++++l+s + Dgt+ +W sp|Q8VDD9|PHIP_MOUSE 259 PLAVLQGHsASITSLQfsplCSGSKRYLSSTGADGTICFW 298 7899****777****999999999999986667******* PP == domain 4 score: 8.5 bits; conditional E-value: 0.057 EEETTSSEEEEEETTSEEEEE CS WD40 17 afspdgawlasGsdDgtvriW 37 +fs g +la+Gs D+ +r++ sp|Q8VDD9|PHIP_MOUSE 328 SFSAGGMFLATGSTDHIIRVY 348 599****************97 PP == domain 5 score: 19.5 bits; conditional E-value: 1.9e-05 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 + +l+ H + v s++fs ++ ++sGs+Dgt riW sp|Q8VDD9|PHIP_MOUSE 358 ISELEFHtDKVDSIQFSNTSNRFVSGSRDGTARIW 392 677899*555************************* PP == domain 6 score: 3.3 bits; conditional E-value: 2.5 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 vt +a++++ + ++++ + t+++W+ sp|Q8VDD9|PHIP_MOUSE 427 VTMVAWDRHDNTVITAVNNMTLKVWN 452 66688*********9988*******8 PP == domain 7 score: 12.6 bits; conditional E-value: 0.0029 TEEEEEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 gq++++l GH + v l +p + ++ s++ Dg+v +Wd sp|Q8VDD9|PHIP_MOUSE 456 GQLIHVLMGHeDEVFVLEPHPFDPRVLfSAGHDGNVIVWD 495 6899******777*999988888886445545*******9 PP == domain 8 score: 7.6 bits; conditional E-value: 0.11 EESSSSEEEEEEETTSSEEEEEETTS CS WD40 7 ltGHssvtslafspdgawlasGsdDg 32 GH+ v +++ spdg+ +a ++ D sp|Q8VDD9|PHIP_MOUSE 511 GQGHGAVFDCKCSPDGQHFA-CT-DS 534 469988************97.65.43 PP >> sp|Q9DAJ4|WDR83_MOUSE WD repeat domain-containing protein 83 OS=Mus musculus OX=10090 GN=Wdr83 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 23.5 0.0 1e-06 8.9e-05 4 38 .] 18 53 .. 15 53 .. 0.79 2 ! 27.4 0.3 6e-08 5.1e-06 2 38 .] 58 95 .. 57 95 .. 0.91 3 ! 25.4 0.1 2.5e-07 2.2e-05 1 38 [] 99 137 .. 99 137 .. 0.94 4 ? 6.5 0.0 0.25 21 3 36 .. 145 177 .. 143 179 .. 0.77 5 ? 10.9 0.2 0.01 0.86 7 36 .. 189 217 .. 183 219 .. 0.79 6 ! 17.5 0.1 8.1e-05 0.0069 1 38 [] 223 263 .. 223 263 .. 0.81 7 ? 3.6 0.0 2 1.7e+02 13 37 .. 280 303 .. 273 304 .. 0.86 Alignments for each domain: == domain 1 score: 23.5 bits; conditional E-value: 1e-06 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++tl+ + v++++f+ dg++ ++++ D+t+++W+ sp|Q9DAJ4|WDR83_MOUSE 18 MKTLDCSqGAVRAVRFNVDGNYCLTCGSDKTLKLWN 53 5677766455************776655*******8 PP == domain 2 score: 27.4 bits; conditional E-value: 6e-08 EEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 ++lrt++GH+ v + a s d++ l+sG+ D+tv +Wd sp|Q9DAJ4|WDR83_MOUSE 58 TLLRTYSGHGYeVLDAAGSFDNSHLCSGGGDKTVVLWD 95 689******446****************88*******9 PP == domain 3 score: 25.4 bits; conditional E-value: 2.5e-07 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 gq +r+++GH + v+ ++f+ + + ++sGs D +vr Wd sp|Q9DAJ4|WDR83_MOUSE 99 GQVVRKFRGHaGKVNTVQFNEEATVILSGSIDSSVRCWD 137 6889******777*************************9 PP == domain 4 score: 6.5 bits; conditional E-value: 0.25 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvri 36 +++tl+ ++++s+++s++ + +Gs Dg vr sp|Q9DAJ4|WDR83_MOUSE 145 PVQTLDEArDGISSVKVSDHEIL--AGSVDGRVRR 177 67777777677999988888777..6*******95 PP == domain 5 score: 10.9 bits; conditional E-value: 0.01 EESSSSEEEEEEETTSSE.EEEEETTSEEEE CS WD40 7 ltGHssvtslafspdgaw.lasGsdDgtvri 36 + G ++t+ +fs+dg+ l+ +s D t+r+ sp|Q9DAJ4|WDR83_MOUSE 189 YVGS-PITCTCFSRDGQCtLI-SSLDSTLRL 217 4555.7************766.566****98 PP == domain 6 score: 17.5 bits; conditional E-value: 8.1e-05 TEEEEEEESS.SS...EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ss...vtslafspdgawlasGsdDgtvriWd 38 g++l+++ GH + +++ s + ++s+s+Dg+v +Wd sp|Q9DAJ4|WDR83_MOUSE 223 GELLGEYVGHkNQqykL-DCCLSERDTHVVSCSEDGKVFFWD 263 578999****6558887.4444888888899**********9 PP == domain 7 score: 3.6 bits; conditional E-value: 2 EEEEEEETTSSEEEEEETTSEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriW 37 v sla++p + l++++ g++ W sp|Q9DAJ4|WDR83_MOUSE 280 VQSLAYHPTEPCLLTAM-GGSIQYW 303 79************999.9999888 PP >> sp|Q8C0J2|A16L1_MOUSE Autophagy-related protein 16-1 OS=Mus musculus OX=10090 GN=Atg16l1 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 29.2 0.0 1.6e-08 1.4e-06 5 37 .. 316 349 .. 313 350 .. 0.91 2 ! 13.7 0.0 0.0013 0.11 5 37 .. 360 393 .. 356 394 .. 0.87 3 ! 26.4 0.1 1.3e-07 1.1e-05 3 38 .] 400 436 .. 398 436 .. 0.91 4 ? 10.2 0.2 0.016 1.4 8 38 .] 448 475 .. 440 475 .. 0.62 5 ? 4.9 0.0 0.8 68 13 37 .. 491 515 .. 483 516 .. 0.89 6 ! 17.9 0.1 6e-05 0.0052 13 38 .] 537 562 .. 523 562 .. 0.85 7 ? 8.6 0.1 0.055 4.7 8 29 .. 574 596 .. 566 604 .. 0.76 Alignments for each domain: == domain 1 score: 29.2 bits; conditional E-value: 1.6e-08 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +++++H + v++++fsp +++la+G++D+ v++W sp|Q8C0J2|A16L1_MOUSE 316 YVFDAHdGEVNAVQFSPGSRLLATGGMDRRVKLW 349 5799**666************************* PP == domain 2 score: 13.7 bits; conditional E-value: 0.0013 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriW 37 ++l+G ++ts+ f++ ga+l+++s D riW sp|Q8C0J2|A16L1_MOUSE 360 GSLSGSnAGITSIEFDSAGAYLLAASNDFASRIW 393 578888556**************9999******* PP == domain 3 score: 26.4 bits; conditional E-value: 1.3e-07 EEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 + +tltGHs+ v s +f d+a ++sGs D+t+++Wd sp|Q8C0J2|A16L1_MOUSE 400 LRHTLTGHSGkVLSAKFLLDNARIVSGSHDRTLKLWD 436 5699****556****************99*******9 PP == domain 4 score: 10.2 bits; conditional E-value: 0.016 ESS..SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH..ssvtslafspdgawlasGsdDgtvriWd 38 G +++ + + ++sG+ D+++r+Wd sp|Q8C0J2|A16L1_MOUSE 448 AGSscNDIVCT-----EQCVMSGHFDKKIRFWD 475 45533343222.....223679*99*******9 PP == domain 5 score: 4.9 bits; conditional E-value: 0.8 EEEEEEETTSSEEEEEETTSEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriW 37 +t+l+ +p+ + l+s+s+D +++ sp|Q8C0J2|A16L1_MOUSE 491 ITALDLNPERTELLSCSRDDLLKVI 515 99*****************999985 PP == domain 6 score: 17.9 bits; conditional E-value: 6e-05 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 t + fspdg+++a+Gs g++++W+ sp|Q8C0J2|A16L1_MOUSE 537 WTRVVFSPDGSYVAAGSAEGSLYVWS 562 68999********************5 PP == domain 7 score: 8.6 bits; conditional E-value: 0.055 ESS.SSEEEEEEETTSSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGs 29 + H ss++++a+ p+g ++s + sp|Q8C0J2|A16L1_MOUSE 574 KQHsSSINAVAWAPSGLHVVSVD 596 379788************98744 PP >> sp|Q3U3T8|WDR62_MOUSE WD repeat-containing protein 62 OS=Mus musculus OX=10090 GN=Wdr62 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 21.1 0.0 5.7e-06 0.00049 2 38 .] 102 141 .. 101 141 .. 0.91 2 ! 10.9 0.0 0.0098 0.84 7 38 .] 151 185 .. 145 185 .. 0.80 3 ? 8.6 0.1 0.052 4.5 13 37 .. 201 224 .. 192 224 .. 0.88 4 ? 4.5 0.1 1 88 16 37 .. 301 320 .. 291 321 .. 0.74 5 ! 13.3 0.2 0.0017 0.15 13 38 .] 363 387 .. 346 387 .. 0.83 6 ! 15.0 0.1 0.0005 0.043 13 38 .] 407 441 .. 397 441 .. 0.73 7 ? 7.6 0.0 0.11 9.2 16 36 .. 498 518 .. 473 520 .. 0.84 8 ? 2.6 0.0 4.1 3.5e+02 6 36 .. 529 563 .. 524 565 .. 0.67 9 ? 7.8 0.0 0.093 8 4 35 .. 573 606 .. 570 607 .. 0.76 10 ? 4.7 0.0 0.92 79 8 38 .] 621 656 .. 615 656 .. 0.72 11 ? 9.3 0.1 0.031 2.6 7 36 .. 666 699 .. 660 701 .. 0.68 12 ! 11.7 0.3 0.0057 0.49 1 37 [. 705 742 .. 705 743 .. 0.86 Alignments for each domain: == domain 1 score: 21.1 bits; conditional E-value: 5.7e-06 EEEEEEESS.SSEEEEEEETTSSEEEEE..ETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasG..sdDgtvriWd 38 ++++++ + +s ++lafspdg+++++G + +tvriWd sp|Q3U3T8|WDR62_MOUSE 102 KQQHIFNTTrKSLSALAFSPDGKYIVTGenGHRPTVRIWD 141 678999999999***************98867*******9 PP == domain 2 score: 10.9 bits; conditional E-value: 0.0098 EESSSS.EEEEEEETTSSEEEE.E..ETTSEEEEEE CS WD40 7 ltGHss.vtslafspdgawlas.G..sdDgtvriWd 38 GH+ v ++afsp+ + ++s G + D + +Wd sp|Q3U3T8|WDR62_MOUSE 151 MLGHKYgVACVAFSPNMKHIVSmGyqH-DMVLNVWD 185 559*555************99656444.*******9 PP == domain 3 score: 8.6 bits; conditional E-value: 0.052 EEEEEEETTSSEEEEEETTSEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriW 37 v +l+fs d++++++ + +++vr+W sp|Q3U3T8|WDR62_MOUSE 201 VIALSFSEDSSYFVTVG-NRHVRFW 224 45899**********9*.******* PP == domain 4 score: 4.5 bits; conditional E-value: 1 EEEETTSSEEEEEETTSEEEEE CS WD40 16 lafspdgawlasGsdDgtvriW 37 l++ + ++++G+ Dg vri+ sp|Q3U3T8|WDR62_MOUSE 301 LCV--SDELIFCGCTDGIVRIF 320 433..4555668999*****97 PP == domain 5 score: 13.3 bits; conditional E-value: 0.0017 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 v +l f+p ++wl++ +D++++iWd sp|Q3U3T8|WDR62_MOUSE 363 V-ALTFDPVHQWLSCVYKDHSIYIWD 387 4.788*******976699*******9 PP == domain 6 score: 15.0 bits; conditional E-value: 0.0005 EEEEE..........EETTSSEEEEEETTSEEEEEE CS WD40 13 vtsla..........fspdgawlasGsdDgtvriWd 38 v+ + p+g++l+++s D+t+r+W+ sp|Q3U3T8|WDR62_MOUSE 407 VWNVEvypefedqraCLPSGTFLTCSS-DNTIRFWN 441 555555555555555679****98777.*******8 PP == domain 7 score: 7.6 bits; conditional E-value: 0.11 EEEETTSSEEEEEETTSEEEE CS WD40 16 lafspdgawlasGsdDgtvri 36 +++spdg+ lasG++ g++ri sp|Q3U3T8|WDR62_MOUSE 498 MQVSPDGQHLASGDRSGNLRI 518 558**********99**9998 PP == domain 8 score: 2.6 bits; conditional E-value: 4.1 EEESS.SSEEEEEEETTSSE.........EEEEETTSEEEE CS WD40 6 tltGH.ssvtslafspdgaw.........lasGsdDgtvri 36 + ++H v +l + las+s+D+ +++ sp|Q3U3T8|WDR62_MOUSE 529 KVEAHdAEVLCLE------YskpetgvtlLASASRDRLIHV 563 5578855588884......44444446658999****9986 PP == domain 9 score: 7.8 bits; conditional E-value: 0.093 EEEEESS.SSEEEEEEETTSSE.EEEEETTSEEE CS WD40 4 lrtltGH.ssvtslafspdgaw.lasGsdDgtvr 35 +tl+ H ss+t+++f + ++s++ D++++ sp|Q3U3T8|WDR62_MOUSE 573 EQTLDDHsSSITAIKFAGTRDVqMISCGADKSIY 606 679999*888****866666667556766**996 PP == domain 10 score: 4.7 bits; conditional E-value: 0.92 ESS..SS...EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH..ss...vtslafspdgawlasGsdDgtvriWd 38 ++H ++++ + ++++a ++ D++vr+++ sp|Q3U3T8|WDR62_MOUSE 621 RTHhvAEkttLYDMDIDITQKYVAVACQDRNVRVYN 656 555331144567777888999**99999******97 PP == domain 11 score: 9.3 bits; conditional E-value: 0.031 EESS.SS...EEEEEEETTSSEEEEEETTSEEEE CS WD40 7 ltGH.ss...vtslafspdgawlasGsdDgtvri 36 ++G ++ + ++p+g++la+++ D+++ + sp|Q3U3T8|WDR62_MOUSE 666 YKGSqGDegsLLKVHVDPSGTFLATSCSDKSISL 699 5555433455567778*******96644***987 PP == domain 12 score: 11.7 bits; conditional E-value: 0.0057 TEEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGHss.vtslafspdgawlasGsdDgtvriW 37 g+c+ + GHs vt+++f d + l++ s D v iW sp|Q3U3T8|WDR62_MOUSE 705 GECVAKMFGHSEiVTGMKFTYDCRHLITVSGDSCVFIW 742 57888888**6657************98766******* PP >> sp|Q9D2V7|CORO7_MOUSE Coronin-7 OS=Mus musculus OX=10090 GN=Coro7 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 29.5 0.1 1.3e-08 1.1e-06 7 37 .. 73 105 .. 59 106 .. 0.82 2 ? 4.4 0.0 1.2 99 8 38 .] 133 154 .. 127 154 .. 0.70 3 ! 15.8 0.0 0.00028 0.024 2 38 .] 159 196 .. 158 196 .. 0.90 4 ? 5.5 0.0 0.49 42 13 37 .. 544 569 .. 535 570 .. 0.82 5 ! 19.3 0.0 2.2e-05 0.0019 4 38 .] 584 620 .. 581 620 .. 0.81 6 ! 26.2 0.0 1.5e-07 1.3e-05 6 37 .. 629 661 .. 624 662 .. 0.90 Alignments for each domain: == domain 1 score: 29.5 bits; conditional E-value: 1.3e-08 EESSSS.EEEEEEETTSSEE.EEEETTSEEEEE CS WD40 7 ltGHss.vtslafspdgawl.asGsdDgtvriW 37 l Hs+ vt+l+fsp ++l asGs D+t+++W sp|Q9D2V7|CORO7_MOUSE 73 LGCHSDlVTDLDFSPFDDFLlASGSADRTIKLW 105 56897789***********736999******** PP == domain 2 score: 4.4 bits; conditional E-value: 1.2 ESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGHss.vtslafspdgawlasGsdDgtvriWd 38 H + v ++ l+s +tv++Wd sp|Q9D2V7|CORO7_MOUSE 133 QFH-PtVDGV--------LVSTA-GKTVKVWD 154 455.336666........77666.*******9 PP == domain 3 score: 15.8 bits; conditional E-value: 0.00028 EEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 q+l++l++H++ v s +s+dga + ++++D+ +ri+d sp|Q9D2V7|CORO7_MOUSE 159 QPLTELEAHKDlVQSAVWSRDGAIVGTACKDKQLRIFD 196 8999*****88899999*******856789******98 PP == domain 4 score: 5.5 bits; conditional E-value: 0.49 EEEEEEETTSSE.EEEEETTSEEEEE CS WD40 13 vtslafspdgaw.lasGsdDgtvriW 37 v +l ++p + la +++D +r+W sp|Q9D2V7|CORO7_MOUSE 544 VMDLVWDPFDPHrLAVAGEDARIRLW 569 7889899999998887888******* PP == domain 5 score: 19.3 bits; conditional E-value: 2.2e-05 EEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 ++ltGH ++sl+f+p a las+s+D tvriWd sp|Q9D2V7|CORO7_MOUSE 584 ETVLTGHtEKIYSLRFHPLAADvLASSSYDLTVRIWD 620 5789***666****888888884467789*******9 PP == domain 6 score: 26.2 bits; conditional E-value: 1.5e-07 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriW 37 +l GH + + sla+spdg+ la+ ++Dg+vr++ sp|Q9D2V7|CORO7_MOUSE 629 KLQGHqDQIFSLAWSPDGKQLATVCKDGHVRVY 661 588**666***************9*******98 PP >> sp|Q922B6|TRAF7_MOUSE E3 ubiquitin-protein ligase TRAF7 OS=Mus musculus OX=10090 GN=Traf7 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 35.1 0.8 2.2e-10 1.9e-08 2 38 .] 311 348 .. 310 348 .. 0.95 2 ! 21.8 0.2 3.5e-06 0.0003 2 38 .] 354 389 .. 353 389 .. 0.78 3 ? 10.1 0.1 0.018 1.5 2 38 .] 394 428 .. 393 428 .. 0.83 4 ? 10.7 0.0 0.012 1 13 38 .] 451 469 .. 435 469 .. 0.72 5 ? 6.0 1.3 0.36 31 2 38 .] 474 509 .. 473 509 .. 0.82 6 ! 23.7 0.0 8.8e-07 7.5e-05 2 38 .] 514 553 .. 513 553 .. 0.93 7 ! 14.0 0.0 0.001 0.088 3 37 .. 559 592 .. 557 593 .. 0.85 Alignments for each domain: == domain 1 score: 35.1 bits; conditional E-value: 2.2e-10 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +c +t+ GH ++v++l++ + g++l+sGs D+t+++Wd sp|Q922B6|TRAF7_MOUSE 311 KCKGTFVGHqGPVWCLCVYSMGDLLFSGSSDKTIKVWD 348 899******888****************99*******9 PP == domain 2 score: 21.8 bits; conditional E-value: 3.5e-06 EEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 +c++tl+GH++ v +l+ g l sGs D+t+ +Wd sp|Q922B6|TRAF7_MOUSE 354 KCQKTLEGHDGiVLALCI--QGCKLYSGSADCTIIVWD 389 8********665666644..5555669**********9 PP == domain 3 score: 10.1 bits; conditional E-value: 0.018 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 q++ t+++H ++v+ l +++++l+sGs + +++Wd sp|Q922B6|TRAF7_MOUSE 394 QKVNTIRAHdNPVCTL--VSSHNMLFSGS-LKAIKVWD 428 678899***9999888..555577789**.*******9 PP == domain 4 score: 10.7 bits; conditional E-value: 0.012 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 v ++ ++l sGs +t++iWd sp|Q922B6|TRAF7_MOUSE 451 VAAQ------SYLYSGS-YQTIKIWD 469 3344......78999**.*******9 PP == domain 5 score: 6.0 bits; conditional E-value: 0.36 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +c+++l + +sv+s+ ++ +++G++ + +++Wd sp|Q922B6|TRAF7_MOUSE 474 DCIHVLQTSgGSVYSI--AVTNHHIVCGTYENLIHVWD 509 6999999887779999..445566889*99*******9 PP == domain 6 score: 23.7 bits; conditional E-value: 8.8e-07 EEEEEEESS.SSEEEEE..EETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtsla..fspdgawlasGsdDgtvriWd 38 +++rtltGH + v++la pd++ ++s+s+D+++r+W+ sp|Q922B6|TRAF7_MOUSE 514 EQVRTLTGHvGTVYALAviSTPDQTKVFSASYDRSLRVWS 553 579******999*999999********************5 PP == domain 7 score: 14.0 bits; conditional E-value: 0.001 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 c++tl H +svt+la+s+ + sG D tv++W sp|Q922B6|TRAF7_MOUSE 559 CTQTLLRHqGSVTALAVSRGRLF--SGAVDSTVKVW 592 77887789888****88888777..8*9******** PP >> sp|Q8K4P0|WDR33_MOUSE pre-mRNA 3' end processing protein WDR33 OS=Mus musculus OX=10090 GN=Wdr33 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 1.8 0.0 7.3 6.3e+02 13 38 .] 122 147 .. 109 147 .. 0.81 2 ! 12.0 0.1 0.0045 0.39 5 37 .. 155 188 .. 151 189 .. 0.90 3 ! 28.5 0.0 2.7e-08 2.3e-06 2 38 .] 193 230 .. 192 230 .. 0.92 4 ! 19.5 0.1 1.9e-05 0.0017 5 32 .. 238 266 .. 234 268 .. 0.91 5 ! 17.7 0.0 7e-05 0.006 1 38 [] 278 316 .. 278 316 .. 0.94 6 ! 16.2 0.0 0.00021 0.018 3 37 .. 323 359 .. 321 360 .. 0.84 7 ! 17.1 0.5 0.00011 0.0096 9 37 .. 373 402 .. 367 403 .. 0.91 Alignments for each domain: == domain 1 score: 1.8 bits; conditional E-value: 7.3 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 v +++ p+g+ l++G g +W+ sp|Q8K4P0|WDR33_MOUSE 122 VFVVRWTPEGRRLVTGASSGEFTLWN 147 55578***********5599999997 PP == domain 2 score: 12.0 bits; conditional E-value: 0.0045 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriW 37 ++l +H s+v+++ +s++ w+++++ g v+ W sp|Q8K4P0|WDR33_MOUSE 155 TILQAHdSPVRAMTWSHNDMWMLTADHGGYVKYW 188 5789**888****************88*****99 PP == domain 3 score: 28.5 bits; conditional E-value: 2.7e-08 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++++ + +H ++ +fsp + +a++sdDgtvriWd sp|Q8K4P0|WDR33_MOUSE 193 NNVKMFQAHkEAIREASFSPTDNKFATCSDDGTVRIWD 230 68899****655*************************9 PP == domain 4 score: 19.5 bits; conditional E-value: 1.9e-05 EEEESS.SSEEEEEEETTSSEEEEEETTS CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDg 32 r+l+GH +v +++++p + +++sGs+D sp|Q8K4P0|WDR33_MOUSE 238 RILRGHgADVKCVDWHPTKGLVVSGSKDS 266 89****888*****************995 PP == domain 5 score: 17.7 bits; conditional E-value: 7e-05 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 gq l tl +H + v ++ + +g+wl+++s+D+ ++++d sp|Q8K4P0|WDR33_MOUSE 278 GQSLATLHAHkNTVMEVKLNLNGNWLLTASRDHLCKLFD 316 68899*****888************************98 PP == domain 6 score: 16.2 bits; conditional E-value: 0.00021 EEEEEESS.SSEEEEEEETTSSEE.EEEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawl.asGsdDgtvriW 37 l++++GH + t++a++p + l asG+ Dg++ +W sp|Q8K4P0|WDR33_MOUSE 323 ELQVFRGHkKEATAVAWHPVHEGLfASGGSDGSLLFW 359 6899****888****888888887368877******* PP == domain 7 score: 17.1 bits; conditional E-value: 0.00011 SSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 9 GHss.vtslafspdgawlasGsdDgtvriW 37 +H + ++sla++p g+ l+sGs D+t ++W sp|Q8K4P0|WDR33_MOUSE 373 AHEGmIWSLAWHPLGHILCSGSNDHTSKFW 402 58456************************* PP >> sp|Q5F201|CFA52_MOUSE Cilia- and flagella-associated protein 52 OS=Mus musculus OX=10090 GN=Cfap52 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.5 0.1 0.00036 0.031 4 38 .] 57 97 .. 54 97 .. 0.75 2 ! 16.8 0.0 0.00013 0.011 7 38 .] 107 141 .. 101 141 .. 0.82 3 ? 6.5 0.0 0.25 21 22 37 .. 170 185 .. 157 186 .. 0.70 4 ? 5.4 0.0 0.53 45 8 37 .. 329 359 .. 296 360 .. 0.79 5 ? 1.5 0.0 9 7.8e+02 14 35 .. 378 399 .. 370 401 .. 0.86 6 ! 11.2 0.0 0.008 0.69 8 37 .. 414 444 .. 406 445 .. 0.81 7 ! 16.4 0.0 0.00018 0.015 7 38 .] 457 489 .. 451 489 .. 0.90 8 ? 3.0 0.0 3.2 2.7e+02 15 37 .. 507 529 .. 499 530 .. 0.85 9 ! 17.5 0.2 8.1e-05 0.0069 3 38 .] 536 573 .. 534 573 .. 0.84 10 ! 12.5 0.0 0.003 0.26 3 37 .. 579 614 .. 577 615 .. 0.85 Alignments for each domain: == domain 1 score: 15.5 bits; conditional E-value: 0.00036 EEEEESS.SSEEEEEEETTSSEEEEE.....ETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasG.....sdDgtvriWd 38 + l GH ++v+++ s++g+++asG + + + +Wd sp|Q5F201|CFA52_MOUSE 57 QNFLHGHgNNVSCVTISKEGDYIASGqvtfmGFKADIILWD 97 45578**999**************97543332377777776 PP == domain 2 score: 16.8 bits; conditional E-value: 0.00013 EESSSS.EEEEEEETTSSEEEE.EE.TTSEEEEEE CS WD40 7 ltGHss.vtslafspdgawlas.Gs.dDgtvriWd 38 l+ H++ + +lafsp+ +l+s G+ dDg+v +W+ sp|Q5F201|CFA52_MOUSE 107 LSLHKGkIEALAFSPNDLYLVSlGGpDDGSVVVWS 141 5669455*************9877788*******5 PP == domain 3 score: 6.5 bits; conditional E-value: 0.25 SSE.EEEEETTSEEEEE CS WD40 22 gaw.lasGsdDgtvriW 37 + +++++ +gt+r+W sp|Q5F201|CFA52_MOUSE 170 RDEmFVTAG-NGTIRVW 185 444246899.******* PP == domain 4 score: 5.4 bits; conditional E-value: 0.53 ESS.SSEEEEEEETTSSEE.EEEETTSEEEEE CS WD40 8 tGH.ssvtslafspdgawl.asGsdDgtvriW 37 t H v ++ f+ a l a++ ++ +r+W sp|Q5F201|CFA52_MOUSE 329 TCHfEAVQDIVFPFGTAELfATCA-KKDIRVW 359 467555888876666666625777.******* PP == domain 5 score: 1.5 bits; conditional E-value: 9 EEEEEETTSSEEEEE.ETTSEEE CS WD40 14 tslafspdgawlasG.sdDgtvr 35 ++++f +dg+ ++s+ + Dg++r sp|Q5F201|CFA52_MOUSE 378 HGIDFMRDGKSIISAwD-DGKIR 399 578999******98777.**998 PP == domain 6 score: 11.2 bits; conditional E-value: 0.008 ESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriW 37 ++H +vt++a+ +d + ++sG+ g vr+W sp|Q5F201|CFA52_MOUSE 414 SAHrIGVTAIATTSDCKRIISGGGEGEVRVW 444 5884449****9999999999988******* PP == domain 7 score: 16.4 bits; conditional E-value: 0.00018 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 l+ H ssv+++++ +++ +++s Dgt+ iWd sp|Q5F201|CFA52_MOUSE 457 LKEHkSSVSCIRVKKNNEECVTASTDGTCIIWD 489 789*888*********9**999999*******9 PP == domain 8 score: 3.0 bits; conditional E-value: 3.2 EEEEETTSSEEEEEETTSEEEEE CS WD40 15 slafspdgawlasGsdDgtvriW 37 +++++p+ +++++ D+++ W sp|Q5F201|CFA52_MOUSE 507 CVCYHPEEFQIITSGTDRKIAYW 529 9999999999987777***9888 PP == domain 9 score: 17.5 bits; conditional E-value: 8.1e-05 EEEEEESS.SS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ss.vtslafspdgawlasGsdDgtvriWd 38 +r+l+G s+ +++++ ++g +++G+ D+ v++Wd sp|Q5F201|CFA52_MOUSE 536 VIRELEGSlSGsINGMDITQEGGHFVTGGHDHLVKVWD 573 577888888444*****9999999999*99*******9 PP == domain 10 score: 12.5 bits; conditional E-value: 0.003 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +++ GH +++ +++ sp +++++s s Dg + W sp|Q5F201|CFA52_MOUSE 579 VTHVGVGHsGNIMAMRISPGNQYIVSVSADGAILRW 614 577888**655**************9999**99777 PP >> tr|J3QN89|J3QN89_MOUSE Angio-associated migratory protein OS=Mus musculus OX=10090 GN=Aamp PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.4 0.0 0.014 1.2 10 37 .. 92 121 .. 86 122 .. 0.87 2 ! 23.1 0.1 1.4e-06 0.00012 2 37 .. 127 163 .. 126 164 .. 0.91 3 ? 3.9 0.1 1.6 1.4e+02 17 37 .. 183 203 .. 168 204 .. 0.78 4 ! 15.9 0.0 0.00026 0.022 15 38 .] 222 245 .. 210 245 .. 0.79 5 ! 22.0 0.1 3.1e-06 0.00027 1 36 [. 249 288 .. 249 289 .. 0.87 6 ! 15.2 0.1 0.00044 0.038 3 38 .] 352 388 .. 350 388 .. 0.85 7 ! 13.7 0.0 0.0013 0.11 2 36 .. 393 428 .. 392 429 .. 0.85 Alignments for each domain: == domain 1 score: 10.4 bits; conditional E-value: 0.014 S.SSEEEEEEETTSSEEE.EEETTSEEEEE CS WD40 10 H.ssvtslafspdgawla.sGsdDgtvriW 37 H sv +++ +p + la +G++D + +W tr|J3QN89|J3QN89_MOUSE 92 HsASVFCVSLDPKTNTLAvTGGEDDKAFVW 121 8667************9769******9999 PP == domain 2 score: 23.1 bits; conditional E-value: 1.4e-06 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 ++l ++ GH +svt+ fs+d++++a+G++ g +++W tr|J3QN89|J3QN89_MOUSE 127 ELLFECAGHkDSVTCAGFSHDSTLVATGDMSGLLKVW 163 6788899**777****************99******* PP == domain 3 score: 3.9 bits; conditional E-value: 1.6 EEETTSSEEEEEETTSEEEEE CS WD40 17 afspdgawlasGsdDgtvriW 37 ++p + l++G+ Dg+ +W tr|J3QN89|J3QN89_MOUSE 183 EWHPRAPVLLAGTADGNTWMW 203 39999*******99**99999 PP == domain 4 score: 15.9 bits; conditional E-value: 0.00026 EEEEETTSSEEEEEETTSEEEEEE CS WD40 15 slafspdgawlasGsdDgtvriWd 38 + ++ pdg+ + G +Dgt+riWd tr|J3QN89|J3QN89_MOUSE 222 CGRVLPDGKRAVVGYEDGTIRIWD 245 555789****999**********9 PP == domain 5 score: 22.0 bits; conditional E-value: 3.1e-06 TEEEEEEE...SS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 1 gqclrtlt...GH.ssvtslafspdgawlasGsdDgtvri 36 g+++++l+ GH ++ t++a+++dg+++++Gs D+ ++ tr|J3QN89|J3QN89_MOUSE 249 GNPIHVLKgteGHqGPLTCVATNQDGSLILTGSVDCQAKL 288 6789999766699888*******************98775 PP == domain 6 score: 15.2 bits; conditional E-value: 0.00044 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +lr+ H s++ l + a + ++s Dg vr+Wd tr|J3QN89|J3QN89_MOUSE 352 TLRHQCQHqSGIVQLLWEAGTAVVYTCSLDGVVRLWD 388 56665678778999999999999*************9 PP == domain 7 score: 13.7 bits; conditional E-value: 0.0013 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvri 36 ++l+ ++GH + ++a s+d +++++ s D++ ++ tr|J3QN89|J3QN89_MOUSE 393 RLLTDYRGHtAEILDFALSKDASLVVTTSGDHKAKV 428 67889****777************997655**9998 PP >> tr|E9Q271|E9Q271_MOUSE WD repeat domain 17 OS=Mus musculus OX=10090 GN=Wdr17 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 13.6 0.2 0.0014 0.12 6 38 .] 78 112 .. 73 112 .. 0.81 2 ! 20.8 0.1 7.3e-06 0.00063 3 38 .] 386 422 .. 384 422 .. 0.85 3 ? 2.7 0.1 3.8 3.3e+02 3 34 .. 471 505 .. 469 507 .. 0.73 4 ! 12.0 0.0 0.0045 0.38 1 37 [. 512 549 .. 512 549 .. 0.80 5 ! 29.5 0.2 1.4e-08 1.2e-06 2 38 .] 557 595 .. 556 595 .. 0.83 6 ! 23.9 0.2 7.6e-07 6.5e-05 3 38 .] 601 638 .. 599 638 .. 0.85 7 ! 18.6 0.4 3.6e-05 0.003 2 38 .] 643 681 .. 642 681 .. 0.91 Alignments for each domain: == domain 1 score: 13.6 bits; conditional E-value: 0.0014 EEESS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawl.asGsdDgtvriWd 38 + + H + +t+++++p+++ l as+s D+ v iW+ tr|E9Q271|E9Q271_MOUSE 78 IMSEHkKTITAISWCPHNPDLfASSSTDNLVIIWN 112 4678*888*****88888887256788*******8 PP == domain 2 score: 20.8 bits; conditional E-value: 7.3e-06 EEEEEESS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawl.asGsdDgtvriWd 38 lr+l GH + +++f pd + + a++s Dgt+++Wd tr|E9Q271|E9Q271_MOUSE 386 FLREL-GHvETIFDCKFKPDDPNVlATASFDGTIKVWD 422 56777.9*888************6268899*******9 PP == domain 3 score: 2.7 bits; conditional E-value: 3.8 EEEEEESS..SSEEEEE.EETTSSEEEEEETTSEE CS WD40 3 clrtltGH..ssvtsla.fspdgawlasGsdDgtv 34 ++ + H +++ +a ++d++ +a++s Dg + tr|E9Q271|E9Q271_MOUSE 471 IIQRFNEHgkNGIFYIAwSHKDSKRIATCSGDGFC 505 5667788985669888866777777**99889977 PP == domain 4 score: 12.0 bits; conditional E-value: 0.0045 TEEEEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgaw.lasGsdDgtvriW 37 g++l++++ H v ++++s++++ +a+G++D+++r++ tr|E9Q271|E9Q271_MOUSE 512 GKLLHKYK-HpAAVFGCDWSQNNKDmIATGCEDKNIRVF 549 67899998.9777****96666555478*********95 PP == domain 5 score: 29.5 bits; conditional E-value: 1.4e-08 EEEEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 q+l++++GH v ++++sp l+sGsdDg+vriWd tr|E9Q271|E9Q271_MOUSE 557 QPLKVFSGHtARVFHVKWSPLREGiLCSGSDDGSVRIWD 595 89*******666****7666666655689*********9 PP == domain 6 score: 23.9 bits; conditional E-value: 7.6e-07 EEEEEESS.SSEEEEEEETTSSE.......EEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw.......lasGsdDgtvriWd 38 c+ tl GH +v++l w l+sGs+D t+++Wd tr|E9Q271|E9Q271_MOUSE 601 CVSTLNGHtAPVRGL------MWnteipylLISGSWDYTIKVWD 638 99******888****......66666666667***********9 PP == domain 7 score: 18.6 bits; conditional E-value: 3.6e-05 EEEEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 cl t H +v++l +p+ ++ +as+s+D tvr+W+ tr|E9Q271|E9Q271_MOUSE 643 VCLDTVYDHgADVYGLTCHPSRPFtMASCSRDSTVRLWS 681 68889889*888************989***********5 PP >> sp|Q8BU03|PWP2_MOUSE Periodic tryptophan protein 2 homolog OS=Mus musculus OX=10090 GN=Pwp2 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 8.7 0.4 0.05 4.3 4 26 .. 90 112 .. 86 118 .. 0.73 2 ? 4.1 0.2 1.4 1.2e+02 14 32 .. 148 166 .. 138 171 .. 0.89 3 ? 3.3 0.0 2.4 2.1e+02 7 37 .. 184 215 .. 179 216 .. 0.71 4 ? 4.0 0.1 1.5 1.3e+02 3 27 .. 322 349 .. 320 359 .. 0.71 5 ! 33.0 0.0 1.1e-09 9.1e-08 8 38 .] 370 401 .. 362 401 .. 0.87 6 ! 17.6 0.5 7.3e-05 0.0063 3 37 .. 407 442 .. 405 443 .. 0.89 7 ? 2.1 0.0 6.1 5.2e+02 13 31 .. 461 479 .. 447 487 .. 0.69 8 ! 34.3 0.1 3.9e-10 3.3e-08 2 38 .] 492 529 .. 491 529 .. 0.95 9 ? 3.4 0.0 2.2 1.9e+02 13 37 .. 608 632 .. 594 633 .. 0.81 10 ? 2.9 0.0 3.3 2.9e+02 10 24 .. 698 716 .. 694 727 .. 0.78 Alignments for each domain: == domain 1 score: 8.7 bits; conditional E-value: 0.05 EEEEESS..SSEEEEEEETTSSEEE CS WD40 4 lrtltGH..ssvtslafspdgawla 26 l+++ H +sv+s++fspdg+ ++ sp|Q8BU03|PWP2_MOUSE 90 LHHF--HfkGSVHSVSFSPDGRKFV 112 5663..55344**********9765 PP == domain 2 score: 4.1 bits; conditional E-value: 1.4 EEEEEETTSSEEEEEETTS CS WD40 14 tslafspdgawlasGsdDg 32 t++++ +d++ ++ Gs+D sp|Q8BU03|PWP2_MOUSE 148 TCIDWTDDSKCFVVGSKDM 166 8***********9***996 PP == domain 3 score: 3.3 bits; conditional E-value: 2.4 EESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 7 ltGHss.vtslafspdgawlasGsdDgtvriW 37 l+GH++ + ++ f +++ l s s Dg + +W sp|Q8BU03|PWP2_MOUSE 184 LSGHKDaIVACFFESNSLDLYSLSQDGALCVW 215 79**5566566455555558966999999999 PP == domain 4 score: 4.0 bits; conditional E-value: 1.5 EEEEEESS.SSEEEEEEETTSSEEE..E CS WD40 3 clrtltGH.ssvtslafspdgawla..s 27 ++++l+ + v s+a +++g+w+a + sp|Q8BU03|PWP2_MOUSE 322 LIHSLSISdQRVASVAINSSGDWIAfgC 349 56666655345999*********98432 PP == domain 5 score: 33.0 bits; conditional E-value: 1.1e-09 ESS.SS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ss.vtslafspdgawlasGsdDgtvriWd 38 GH +s v +la+spdg+++++G+dDg+v++W+ sp|Q8BU03|PWP2_MOUSE 370 QGHfNSmV-ALAYSPDGQYIVTGGDDGKVKVWN 401 5**99956.***********************8 PP == domain 6 score: 17.6 bits; conditional E-value: 7.3e-05 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 c tlt H s+vt++ f g+ ++++s Dgtvr + sp|Q8BU03|PWP2_MOUSE 407 CFVTLTEHsSGVTGVTFTTTGHVIVTSSLDGTVRAF 442 7889****777**********************965 PP == domain 7 score: 2.1 bits; conditional E-value: 6.1 EEEEEEETTSSEEEEEETT CS WD40 13 vtslafspdgawlasGsdD 31 +++a++++g +++G D sp|Q8BU03|PWP2_MOUSE 461 FSCVAVDSSGEIVSAGAQD 479 579**********999743 PP == domain 8 score: 34.3 bits; conditional E-value: 3.9e-10 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++l +l+GH ++v++l+f+p ++ las+s+D+tvr+Wd sp|Q8BU03|PWP2_MOUSE 492 RLLDVLSGHeGPVSGLCFNPMKSILASASWDKTVRLWD 529 67889****999*************************9 PP == domain 9 score: 3.4 bits; conditional E-value: 2.2 EEEEEEETTSSEEEEEETTSEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriW 37 t l++s dg+ +++G++ + v ++ sp|Q8BU03|PWP2_MOUSE 608 FTTLCYSADGQSILAGGMSKFVCLY 632 5899************988887775 PP == domain 10 score: 2.9 bits; conditional E-value: 3.3 S.SS...EEEEEEETTSSE CS WD40 10 H.ss...vtslafspdgaw 24 H ++ vtsl+fsp g+ sp|Q8BU03|PWP2_MOUSE 698 HfKPeirVTSLRFSPTGRC 716 76678789********987 PP >> tr|D3Z7A8|D3Z7A8_MOUSE WD40 repeat domain 95 OS=Mus musculus OX=10090 GN=Wdr95 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 21.5 0.0 4.3e-06 0.00037 4 38 .] 135 170 .. 132 170 .. 0.90 2 ! 16.3 0.0 0.0002 0.017 1 38 [] 175 213 .. 175 213 .. 0.85 3 ? 9.0 0.1 0.039 3.3 7 38 .] 269 301 .. 263 301 .. 0.88 4 ! 27.4 0.2 5.9e-08 5e-06 6 38 .] 310 345 .. 305 345 .. 0.81 5 ? 3.1 0.1 2.9 2.5e+02 1 37 [. 349 390 .. 349 390 .. 0.66 6 ! 12.1 0.0 0.0042 0.36 8 38 .] 413 443 .. 401 443 .. 0.76 7 ! 15.9 0.2 0.00026 0.023 3 38 .] 566 602 .. 564 602 .. 0.87 Alignments for each domain: == domain 1 score: 21.5 bits; conditional E-value: 4.3e-06 EEE.EESSSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrt.ltGHssvtslafspdgawlasGsdDgtvriWd 38 rt ++ H++v +++f++ +++l++G+ D+ +r+W+ tr|D3Z7A8|D3Z7A8_MOUSE 135 NRTvFRVHKGVKAFSFCRRKNLLVTGGLDRIIRVWN 170 44449******************************8 PP == domain 2 score: 16.3 bits; conditional E-value: 0.0002 TEEEEEEESS.SSE..EEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssv..tslafspdgawlasGsdDgtvriWd 38 g+++++l+GH +v ++af ++ + + + D+tv++Wd tr|D3Z7A8|D3Z7A8_MOUSE 175 GKPTGVLRGHrAPVmyVHVAFEENKVFSM-SA-DNTVKVWD 213 68999*****9997555999999999966.46.*******9 PP == domain 3 score: 9.0 bits; conditional E-value: 0.039 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + H +v +++++p + ++s+++ v++Wd tr|D3Z7A8|D3Z7A8_MOUSE 269 VRSHqEPVVCCRYNPAFRHVVSCCEASVVKVWD 301 578978899***********************9 PP == domain 4 score: 27.4 bits; conditional E-value: 5.9e-08 EEE.SS.SS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tlt.GH.ss.vtslafspdgawlasGsdDgtvriWd 38 ++ +H + +t+l f+++g+ l++G++Dg ++iW+ tr|D3Z7A8|D3Z7A8_MOUSE 310 EFIgTHgNAgITCLTFDSSGRRLVTGGRDGCLKIWS 345 5542566447*************************5 PP == domain 5 score: 3.1 bits; conditional E-value: 2.9 TEEEEEEESS..SS..EEEEEEETTSSE........EEEEETTSEEEEE CS WD40 1 gqclrtltGH..ss..vtslafspdgaw........lasGsdDgtvriW 37 g cl+tl H + v+++ ++ +++ ++D+ + ++ tr|D3Z7A8|D3Z7A8_MOUSE 349 GHCLHTLQ-HdeNQseVCDC------TYmevnrnrcVIAVGWDRRINVY 390 5799**95.86533689999......55444444544457999999875 PP == domain 6 score: 12.1 bits; conditional E-value: 0.0042 ESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 GH ++ ++a + ++ la++s+Dg + +W+ tr|D3Z7A8|D3Z7A8_MOUSE 413 HGHkEDILCVA--QCPPFlLATSSYDGEIIVWN 443 399777****4..444443478899*******8 PP == domain 7 score: 15.9 bits; conditional E-value: 0.00026 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++++++H s vtsl g+ ++s+s D+tvr+W+ tr|D3Z7A8|D3Z7A8_MOUSE 566 TVTSWRAHvSMVTSLELIEGGSIVLSSSLDCTVRLWS 602 678899**555****99999999999**********5 PP >> sp|Q3UMY5|EMAL4_MOUSE Echinoderm microtubule-associated protein-like 4 OS=Mus musculus OX=10090 GN=Eml4 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.1 0.1 2.9e-06 0.00025 2 38 .] 311 358 .. 310 358 .. 0.84 2 ? 2.5 0.0 4.6 3.9e+02 13 37 .. 423 447 .. 411 448 .. 0.77 3 ? 6.0 0.0 0.34 29 11 37 .. 468 493 .. 456 494 .. 0.79 4 ! 13.1 0.0 0.002 0.17 5 38 .] 514 548 .. 510 548 .. 0.87 5 ! 17.7 0.0 7.1e-05 0.0061 6 38 .] 598 631 .. 594 631 .. 0.92 6 ? 5.1 0.0 0.67 57 17 37 .. 693 713 .. 678 714 .. 0.80 7 ! 19.4 0.7 2e-05 0.0017 6 38 .] 727 760 .. 722 760 .. 0.86 8 ! 18.8 1.1 3.1e-05 0.0026 3 38 .] 837 874 .. 835 874 .. 0.80 Alignments for each domain: == domain 1 score: 22.1 bits; conditional E-value: 2.9e-06 EEEEEEESS.SSEEEEEEETTSSEEEEE...ET.......TSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasG...sd.......DgtvriWd 38 +++r++ GH ++v++la++pd+ +a+G + ++vr+Wd sp|Q3UMY5|EMAL4_MOUSE 311 RTQRHYLGHtDCVRCLAVHPDKIRIATGqiaGVdkdgrplQPHVRVWD 358 679******777*************998665424678899*******9 PP == domain 2 score: 2.5 bits; conditional E-value: 4.6 EEEEEEETTSSE.EEEEETTSEEEEE CS WD40 13 vtslafspdgaw.lasGsdDgtvriW 37 v ++ f+p a +++++ + ++ +W sp|Q3UMY5|EMAL4_MOUSE 423 VLAVEFHPTDANtIITCG-KSHIFFW 447 4677777777776899**.******9 PP == domain 3 score: 6.0 bits; conditional E-value: 0.34 SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriW 37 ++v +laf +g+ l +G+ g iW sp|Q3UMY5|EMAL4_MOUSE 468 KFVQCLAFLGNGDVL-TGDSGGVMLIW 493 459***********8.79658888889 PP == domain 4 score: 13.1 bits; conditional E-value: 0.002 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 r +++H +sv l+ ++g +l+ G++D+++ +Wd sp|Q3UMY5|EMAL4_MOUSE 514 RQIKAHdGSVFTLCQMRNGMLLTGGGKDRKIILWD 548 67799*888**9*99******98779********9 PP == domain 5 score: 17.7 bits; conditional E-value: 7.1e-05 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + GH + ++la++p +++l+++ D+ v +W+ sp|Q3UMY5|EMAL4_MOUSE 598 EVQGHrDELWGLATHPFKDLLLTCAQDRQVCMWN 631 568**888*************************8 PP == domain 6 score: 5.1 bits; conditional E-value: 0.67 EEETTSSEEEEEETTSEEEEE CS WD40 17 afspdgawlasGsdDgtvriW 37 ++s dg++la Gs D+ ++++ sp|Q3UMY5|EMAL4_MOUSE 693 RYSVDGTLLAVGSHDNFIYLY 713 3677********99**99986 PP == domain 7 score: 19.4 bits; conditional E-value: 2e-05 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++tGH s +t+l++spd++ ++s s D + Wd sp|Q3UMY5|EMAL4_MOUSE 727 KCTGHsSYITHLDWSPDNKHIMSNSGDYEILYWD 760 689**555*************97555****9998 PP == domain 8 score: 18.8 bits; conditional E-value: 3.1e-05 EEEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 + +++++H s+vt ++f ++ + +++G++D ++ W+ sp|Q3UMY5|EMAL4_MOUSE 837 PSHKYSAHsSHVTNVSFTHNDSHlISTGGKDMSIIQWK 874 6899****888*****666666615699********95 PP >> sp|Q8C7V3|UTP15_MOUSE U3 small nucleolar RNA-associated protein 15 homolog OS=Mus musculus OX=10090 GN=Utp15 PE=1 SV # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 12.0 0.0 0.0043 0.37 13 38 .] 83 108 .. 70 108 .. 0.79 2 ! 30.1 0.1 8.3e-09 7.1e-07 2 38 .] 113 150 .. 112 150 .. 0.95 3 ! 17.0 0.0 0.00012 0.01 3 38 .] 156 193 .. 154 193 .. 0.88 4 ! 13.0 0.0 0.0022 0.19 9 38 .] 204 233 .. 197 233 .. 0.90 5 ! 25.6 0.1 2.2e-07 1.9e-05 1 37 [. 238 275 .. 238 276 .. 0.93 Alignments for each domain: == domain 1 score: 12.0 bits; conditional E-value: 0.0043 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 ++ f +dg++l++Gs+Dg v ++d sp|Q8C7V3|UTP15_MOUSE 83 AYCATFRQDGQLLVAGSEDGVVQLFD 108 468889****************9987 PP == domain 2 score: 30.1 bits; conditional E-value: 8.3e-09 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +lr ++GH + v+ ++f d+ ++sG dD tv++Wd sp|Q8C7V3|UTP15_MOUSE 113 APLRQFEGHtKAVHTVDFTADNYHVVSGADDYTVKLWD 150 5899*****999*************************9 PP == domain 3 score: 17.0 bits; conditional E-value: 0.00012 EEEEEESSSS.E.EEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGHss.v.tslafspdgawlasGsdDgtvriWd 38 + t++ Hs+ v +++a + +++++Gs+D+tv+i+d sp|Q8C7V3|UTP15_MOUSE 156 EILTFKEHSDyVrCGCASKLNPDLFVTGSYDHTVKIFD 193 57899***556*999999999999************98 PP == domain 4 score: 13.0 bits; conditional E-value: 0.0022 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 H ++v s+ p+g +l+s++ + v++Wd sp|Q8C7V3|UTP15_MOUSE 204 EHgQPVESVLLFPSGGLLVSAG-GRYVKVWD 233 58778*****************.*******9 PP == domain 5 score: 25.6 bits; conditional E-value: 2.2e-07 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 gq+l +l+ H + vt+l+ s++g+ l+sGs D++v+++ sp|Q8C7V3|UTP15_MOUSE 238 GQLLVSLKNHhKTVTCLCLSSSGQRLLSGSLDRKVKVY 275 6788999999899***********************98 PP >> sp|Q8BH57|WDR48_MOUSE WD repeat-containing protein 48 OS=Mus musculus OX=10090 GN=Wdr48 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.2 0.0 0.016 1.4 11 38 .] 31 58 .. 25 58 .. 0.89 2 ! 18.3 0.6 4.6e-05 0.004 7 38 .] 71 103 .. 66 103 .. 0.82 3 ! 21.0 0.0 6.5e-06 0.00056 3 38 .] 109 145 .. 107 145 .. 0.93 4 ! 15.1 0.0 0.00048 0.041 4 38 .] 161 196 .. 158 196 .. 0.92 5 ! 24.8 0.1 4e-07 3.4e-05 4 38 .] 203 238 .. 200 238 .. 0.90 6 ? 10.6 0.1 0.013 1.1 2 35 .. 243 277 .. 242 280 .. 0.88 Alignments for each domain: == domain 1 score: 10.2 bits; conditional E-value: 0.016 SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriWd 38 ++v++l+ +p + l+++++D +riW+ sp|Q8BH57|WDR48_MOUSE 31 NGVNALQLDPALNRLFTAGRDSIIRIWS 58 56999999999999*99999*******5 PP == domain 2 score: 18.3 bits; conditional E-value: 4.6e-05 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + H ++v+++ + +g+ l+s+s D tv++W+ sp|Q8BH57|WDR48_MOUSE 71 MEHHtDWVNDVVLCCNGKTLISASSDTTVKVWN 103 566866688888888*****99988*******8 PP == domain 3 score: 21.0 bits; conditional E-value: 6.5e-06 EEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 c+ tl++H++ v +la+ +d+ ++as++ D+ + +Wd sp|Q8BH57|WDR48_MOUSE 109 CMSTLRTHKDyVKALAYAKDKELVASAGLDRQIFLWD 145 999*****666**************9999*******9 PP == domain 4 score: 15.1 bits; conditional E-value: 0.00048 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + +l+G +s++sla ++ g+ ++sGs + +r+Wd sp|Q8BH57|WDR48_MOUSE 161 TSSLSGNkDSIYSLAMNQLGTIIVSGSTEKVLRVWD 196 56899**777*************************9 PP == domain 5 score: 24.8 bits; conditional E-value: 4e-07 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 l +l+GH ++v +l ++dg+ +sGs Dgt+r+W+ sp|Q8BH57|WDR48_MOUSE 203 LMKLKGHtDNVKALLLHRDGTQCLSGSSDGTIRLWS 238 7789***766****************99*******5 PP == domain 6 score: 10.6 bits; conditional E-value: 0.013 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvr 35 +c+ t++ H +v++l++++ + + sG++D++++ sp|Q8BH57|WDR48_MOUSE 243 RCIATYRVHdEGVWALQVNDAFTHVYSGGRDRKIY 277 79*******777****888888889*******996 PP >> sp|Q61666|HIRA_MOUSE Protein HIRA OS=Mus musculus OX=10090 GN=Hira PE=1 SV=3 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.0 0.2 0.0005 0.043 9 38 .] 10 44 .. 4 44 .. 0.85 2 ! 25.5 0.1 2.4e-07 2.1e-05 9 38 .] 68 98 .. 61 98 .. 0.90 3 ! 34.4 4.0 3.7e-10 3.1e-08 1 38 [] 121 159 .. 121 159 .. 0.95 4 ! 22.2 0.0 2.7e-06 0.00023 3 37 .. 166 201 .. 164 202 .. 0.89 5 ? 10.3 0.1 0.015 1.3 9 29 .. 221 241 .. 213 246 .. 0.79 6 ? 5.7 0.6 0.45 38 7 37 .. 264 312 .. 258 312 .. 0.67 Alignments for each domain: == domain 1 score: 15.0 bits; conditional E-value: 0.0005 SS..SSEEEEEEETTSSEEEEEE...TTSEEEEEE CS WD40 9 GH..ssvtslafspdgawlasGs...dDgtvriWd 38 H +++ s++ +pdg+ +a+G+ d g+v iW+ sp|Q61666|HIRA_MOUSE 10 NHngKPIFSVDIHPDGTKFATGGqgqDSGKVVIWN 44 686566****************86677*******8 PP == domain 2 score: 25.5 bits; conditional E-value: 2.4e-07 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 H +v+++++s +g +lasG+dD+ +++W+ sp|Q61666|HIRA_MOUSE 68 NHlACVNCVRWSNSGMYLASGGDDKLIMVWK 98 68888*************************6 PP == domain 3 score: 34.4 bits; conditional E-value: 3.7e-10 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++c+ +l+ H ++v ++a+sp+ awlas+s D+tv iW+ sp|Q61666|HIRA_MOUSE 121 WRCVSILRSHsGDVMDVAWSPHDAWLASCSVDNTVVIWN 159 68********777*************************8 PP == domain 4 score: 22.2 bits; conditional E-value: 2.7e-06 EEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGHss.vtslafspdgawlasGsdDgtvriW 37 l tl+GHs+ v +l ++p g+++as dD+++++W sp|Q61666|HIRA_MOUSE 166 ILATLRGHSGlVKGLTWDPVGKYIASQADDRSLKVW 201 5789****7789***********986588******* PP == domain 5 score: 10.3 bits; conditional E-value: 0.015 SSSSEEEEEEETTSSEEEEEE CS WD40 9 GHssvtslafspdgawlasGs 29 G ++v l++spdg++l+s++ sp|Q61666|HIRA_MOUSE 221 GTTHVLRLSWSPDGHYLVSAH 241 3344**************986 PP == domain 6 score: 5.7 bits; conditional E-value: 0.45 EESS.SSEEEEE...............EETTSSE..EEEEETTSEEEEE CS WD40 7 ltGH.ssvtsla...............fspdgaw..lasGsdDgtvriW 37 + GH + vt ++ + p+ ++ a Gs+D+++ +W sp|Q61666|HIRA_MOUSE 264 FVGHrKAVTVVKfnpkifkkkqkngssTKPSCPYccCAVGSKDRSLSVW 312 67887778777766777777666666655555553335689******** PP >> sp|Q9QXL2|KI21A_MOUSE Kinesin-like protein KIF21A OS=Mus musculus OX=10090 GN=Kif21a PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 26.2 0.4 1.5e-07 1.3e-05 2 38 .] 1336 1371 .. 1335 1371 .. 0.95 2 ? 6.5 0.1 0.24 20 1 38 [] 1375 1412 .. 1375 1412 .. 0.94 3 ? 9.9 0.0 0.021 1.8 5 38 .] 1444 1476 .. 1440 1476 .. 0.88 4 ! 18.2 0.0 4.8e-05 0.0041 2 38 .] 1481 1521 .. 1480 1521 .. 0.93 5 ? 6.0 0.0 0.34 29 9 38 .] 1539 1567 .. 1530 1567 .. 0.77 6 ? 9.3 0.0 0.032 2.7 4 38 .] 1575 1610 .. 1572 1610 .. 0.88 7 ! 21.7 0.0 3.8e-06 0.00033 3 38 .] 1616 1650 .. 1614 1650 .. 0.80 Alignments for each domain: == domain 1 score: 26.2 bits; conditional E-value: 1.5e-07 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 qc+++ +GH + v ++ ++ ++l++Gs+D+t+++W+ sp|Q9QXL2|KI21A_MOUSE 1336 QCVHIAEGHtKAVLCV--DSTDDLLFTGSKDRTCKVWN 1371 8********999****..99999999***********8 PP == domain 2 score: 6.5 bits; conditional E-value: 0.24 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 gq + +l H ++v s++++ + +++++ s +++Wd sp|Q9QXL2|KI21A_MOUSE 1375 GQEIMSLGVHpNNVVSVKYCNYTSLVFTVS-TSYIKVWD 1412 57889999**99999***************.*******9 PP == domain 3 score: 9.9 bits; conditional E-value: 0.021 EEEESSSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGHssvtslafspdgawlasGsdDgtvriWd 38 + +G s ++ +a +p g++l ++s + vr+Wd sp|Q9QXL2|KI21A_MOUSE 1444 AIPSGESQINQIALNPTGTFLYAAS-GNAVRMWD 1476 56677777*****************.*******9 PP == domain 4 score: 18.2 bits; conditional E-value: 4.8e-05 EEEEEEESS.SSEEEEE...EETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtsla...fspdgawlasGsdDgtvriWd 38 q +++ltGH ++v +l s ++++++Gs+D+ ++++d sp|Q9QXL2|KI21A_MOUSE 1481 QSTGKLTGHlGPVMCLTvdqISNGQDLIITGSKDHYIKMFD 1521 567889***********99*******************998 PP == domain 5 score: 6.0 bits; conditional E-value: 0.34 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 H +++ +la + d+ + sGs+D+ ++ Wd sp|Q9QXL2|KI21A_MOUSE 1539 PHyDGIEALAIQGDNLF--SGSRDNGIKKWD 1567 57777999987777777..9**********9 PP == domain 6 score: 9.3 bits; conditional E-value: 0.032 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++ +H ++v++l p ++ l+sG++ g +++W+ sp|Q9QXL2|KI21A_MOUSE 1575 QQVPNAHkDWVCALGLVPGHPVLLSGCRGGILKLWN 1610 667789*666****99999999*************8 PP == domain 7 score: 21.7 bits; conditional E-value: 3.8e-06 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++++ +GH s+++++++ +++ ++++ dD+tvriW+ sp|Q9QXL2|KI21A_MOUSE 1616 PVGEMRGHdSPINAICV--NSTHVFTAADDRTVRIWK 1650 68899***888998855..6666668888*******6 PP >> sp|Q8CBE3|WDR37_MOUSE WD repeat-containing protein 37 OS=Mus musculus OX=10090 GN=Wdr37 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.0 0.2 0.00024 0.021 2 38 .] 147 185 .. 146 185 .. 0.91 2 ! 26.6 0.1 1.1e-07 9.5e-06 1 37 [. 189 226 .. 189 227 .. 0.92 3 ? 9.9 0.1 0.02 1.7 3 38 .] 275 311 .. 273 311 .. 0.87 4 ! 30.2 0.4 7.7e-09 6.6e-07 2 38 .] 316 353 .. 315 353 .. 0.94 5 ! 23.7 1.5 8.9e-07 7.6e-05 4 38 .] 362 396 .. 359 396 .. 0.78 6 ? 4.2 0.1 1.3 1.1e+02 8 34 .. 453 482 .. 447 486 .. 0.76 Alignments for each domain: == domain 1 score: 16.0 bits; conditional E-value: 0.00024 EEEEEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 q+++++ GH ++++++++ + ++ ++ ++s D+t +W+ sp|Q8CBE3|WDR37_MOUSE 147 QLVKEYIGHrDGIWDVSVTRTQPIVLgTASADHTALLWS 185 78999****999*************976789*******5 PP == domain 2 score: 26.6 bits; conditional E-value: 1.1e-07 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 g+cl ++ GH +sv+s++f+p+ ++ +++s D+t +iW sp|Q8CBE3|WDR37_MOUSE 189 GKCLVKYAGHvGSVNSIKFHPSEQLALTASGDQTAHIW 226 69********999************887766******* PP == domain 3 score: 9.9 bits; conditional E-value: 0.02 EEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 +l++l+ H++ v + ++ g+ ++++s+D+t ++d sp|Q8CBE3|WDR37_MOUSE 275 PLTSLKSHQGvVIAADWLVGGKQVVTASWDRTANLYD 311 7899****7755799899999999********99998 PP == domain 4 score: 30.2 bits; conditional E-value: 7.7e-09 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++++ltGH + t+++++p +++++++s+D t r+Wd sp|Q8CBE3|WDR37_MOUSE 316 ELVHSLTGHdQELTHCCTHPTQRLVVTSSRDTTFRLWD 353 679******777*************************9 PP == domain 5 score: 23.7 bits; conditional E-value: 8.9e-07 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + ++ GH + vts f + +sGsdD+tv++Wd sp|Q8CBE3|WDR37_MOUSE 362 VNVFQGHtDTVTSAVFTVGDNV-VSGSDDRTVKVWD 396 56899**666988856555555.69**********9 PP == domain 6 score: 4.2 bits; conditional E-value: 1.3 ESSSS..EEEEEEETTSSE..EEEEETTSEE CS WD40 8 tGHss..vtslafspdgaw..lasGsdDgtv 34 GH v++ a+s d++ l++++ D+ sp|Q8CBE3|WDR37_MOUSE 453 QGH-RrmVCCSAWSEDHPIcnLFTCGFDRQA 482 599.34799999*****99887777779875 PP >> sp|Q8CGF6|WDR47_MOUSE WD repeat-containing protein 47 OS=Mus musculus OX=10090 GN=Wdr47 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 8.7 0.0 0.05 4.3 3 36 .. 600 633 .. 598 633 .. 0.85 2 ! 24.8 0.0 4e-07 3.4e-05 9 36 .. 660 688 .. 650 688 .. 0.87 3 ! 21.7 1.2 3.9e-06 0.00033 1 38 [] 746 783 .. 746 783 .. 0.91 4 ! 16.3 0.0 0.00019 0.016 6 38 .] 796 829 .. 788 829 .. 0.81 5 ! 20.7 0.0 7.7e-06 0.00066 3 36 .. 835 869 .. 833 871 .. 0.90 6 ? 6.8 0.1 0.19 16 7 37 .. 885 916 .. 880 917 .. 0.61 Alignments for each domain: == domain 1 score: 8.7 bits; conditional E-value: 0.05 EEEEEESSSSEEEEEEETTSSEEEEEETTSEEEE CS WD40 3 clrtltGHssvtslafspdgawlasGsdDgtvri 36 c+ tl+ + v+++af+p+g++ a Gs +t+r+ sp|Q8CGF6|WDR47_MOUSE 600 CINTLEDTQAVRAVAFHPSGSLYAVGSNSKTLRV 633 7777776667************999**9999997 PP == domain 2 score: 24.8 bits; conditional E-value: 4e-07 SS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvri 36 H +s++++a+sp g++la+Gs D+ v++ sp|Q8CGF6|WDR47_MOUSE 660 HHkGSIYCVAWSPCGQLLATGSNDKYVKV 688 57666**********************97 PP == domain 3 score: 21.7 bits; conditional E-value: 3.9e-06 TEEEEEEESS.SSEEEEEEETTSSE....EEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgaw....lasGsdDgtvriWd 38 gq l+ l+GH +++ +l +w +asGs D+tvr+Wd sp|Q8CGF6|WDR47_MOUSE 746 GQGLHALSGHtGHILAL-----YTWsgwmIASGSQDKTVRFWD 783 578999****888****.....888999999***********9 PP == domain 4 score: 16.3 bits; conditional E-value: 0.00019 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 t+ G s v s+a++p+g++la+G +D +++++d sp|Q8CGF6|WDR47_MOUSE 796 TFHGTgSAVASVAVDPSGRLLATGQEDSSCMLYD 829 45555555****************89******98 PP == domain 5 score: 20.7 bits; conditional E-value: 7.7e-06 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvri 36 ++++ H s+v+s++fsp ++l++Gs+D ++++ sp|Q8CGF6|WDR47_MOUSE 835 MVQSYHPHsSDVRSVRFSPGAHYLLTGSYDMKIKV 869 5789999*888**********************98 PP == domain 6 score: 6.8 bits; conditional E-value: 0.19 EESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 7 ltGHss.vtslafspdgawlasGsdDgtvriW 37 H++ v ++++ ++s+s D+tv +W sp|Q8CGF6|WDR47_MOUSE 885 VGEHKDkVIQCRWHTQDLSFLSSSADRTVTLW 916 5567555445544444444556777******* PP >> sp|Q91WM3|U3IP2_MOUSE U3 small nucleolar RNA-interacting protein 2 OS=Mus musculus OX=10090 GN=Rrp9 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 13.9 0.1 0.0011 0.096 4 37 .. 139 173 .. 137 174 .. 0.90 2 ! 21.8 0.0 3.5e-06 0.0003 8 37 .. 196 226 .. 190 227 .. 0.90 3 ! 23.8 0.4 8.5e-07 7.3e-05 2 38 .] 232 269 .. 231 269 .. 0.92 4 ! 15.7 0.0 0.00031 0.026 6 38 .] 278 311 .. 273 311 .. 0.71 5 ! 12.8 0.1 0.0024 0.21 3 37 .. 316 350 .. 314 350 .. 0.77 6 ? 6.6 0.0 0.22 19 13 37 .. 379 403 .. 364 404 .. 0.81 7 ? 6.5 0.0 0.24 21 12 28 .. 423 439 .. 416 446 .. 0.84 Alignments for each domain: == domain 1 score: 13.9 bits; conditional E-value: 0.0011 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +r+l+GH s+t+l pd ++s+ +D+t+ W sp|Q91WM3|U3IP2_MOUSE 139 IRVLRGHqLSITCLVITPDDLAIFSAAKDCTIIKW 173 689****877*****9999999999*******877 PP == domain 2 score: 21.8 bits; conditional E-value: 3.5e-06 ESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriW 37 GH s+v ++a s+dg++lasG++ + + iW sp|Q91WM3|U3IP2_MOUSE 196 AGHsSHVLCMAISSDGKYLASGDRSKLILIW 226 59*888************************* PP == domain 3 score: 23.8 bits; conditional E-value: 8.5e-07 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 q+l+t+tGH + v++laf + + l s s D++v++W+ sp|Q91WM3|U3IP2_MOUSE 232 QHLYTFTGHrDAVSGLAFRKGTHQLYSTSHDRSVKVWN 269 7899*****888*************98888*******8 PP == domain 4 score: 15.7 bits; conditional E-value: 0.00031 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 tl GH + v +l+ + +++G++Dgtvr+W+ sp|Q91WM3|U3IP2_MOUSE 278 TLFGHqDAVAALDALSRECCVTAGGRDGTVRVWK 311 56688555777754444444899**********6 PP == domain 5 score: 12.8 bits; conditional E-value: 0.0024 EEEEEESS.SSEEEEEEETTSSE.....EEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw.....lasGsdDgtvriW 37 + ++ GH +s+ ++ ++ ++sG dDg+v +W sp|Q91WM3|U3IP2_MOUSE 316 SQLVFYGHqGSIDCI------HLineehMVSGADDGSVALW 350 577899**888*999......5544444579*********9 PP == domain 6 score: 6.6 bits; conditional E-value: 0.22 EEEEEEETTSSEEEEEETTSEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriW 37 v+s+a + +++a+Gs + vr+W sp|Q91WM3|U3IP2_MOUSE 379 VSSVAALLNTDLVATGSHNARVRLW 403 666666667788****99******* PP == domain 7 score: 6.5 bits; conditional E-value: 0.24 SEEEEEEETTSSEEEEE CS WD40 12 svtslafspdgawlasG 28 +++sl+fs+ g++l++G sp|Q91WM3|U3IP2_MOUSE 423 FINSLKFSSAGDFLVAG 439 39*************99 PP >> sp|Q9QXL1|KI21B_MOUSE Kinesin-like protein KIF21B OS=Mus musculus OX=10090 GN=Kif21b PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 19.1 0.0 2.5e-05 0.0022 2 38 .] 1301 1336 .. 1300 1336 .. 0.91 2 ! 11.4 0.2 0.0069 0.59 2 38 .] 1341 1377 .. 1340 1377 .. 0.92 3 ? 7.3 0.0 0.13 11 10 37 .. 1415 1440 .. 1383 1441 .. 0.87 4 ! 18.7 0.0 3.4e-05 0.0029 2 37 .. 1446 1485 .. 1445 1486 .. 0.93 5 ? 7.4 0.0 0.13 11 9 38 .] 1504 1532 .. 1495 1532 .. 0.79 6 ! 11.3 0.0 0.0075 0.64 5 38 .] 1541 1575 .. 1537 1575 .. 0.89 7 ! 19.3 0.2 2.3e-05 0.0019 3 38 .] 1581 1615 .. 1579 1615 .. 0.78 Alignments for each domain: == domain 1 score: 19.1 bits; conditional E-value: 2.5e-05 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 qc+ +GH +++ +l + +l++Gs+D+++++W+ sp|Q9QXL1|KI21B_MOUSE 1301 QCISMAEGHtKPILCL--DATDELLFTGSKDRSCKMWN 1336 6777778**999****..999999*************8 PP == domain 2 score: 11.4 bits; conditional E-value: 0.0069 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 q + l+GH ++v s+++++++ +++s s +++Wd sp|Q9QXL1|KI21B_MOUSE 1341 QEIAALKGHpNNVVSIKYCSHSGLVFSVS-SSYIKVWD 1377 678889***99999************99*.*******9 PP == domain 3 score: 7.3 bits; conditional E-value: 0.13 SSSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 10 HssvtslafspdgawlasGsdDgtvriW 37 H ++ +a sp+g++l +s + vriW sp|Q9QXL1|KI21B_MOUSE 1415 H-QINQMALSPSGSMLYVAS-GNAVRIW 1440 4.499999********99**.******* PP == domain 4 score: 18.7 bits; conditional E-value: 3.4e-05 EEEEEEESS.SSEEEEE...EETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtsla...fspdgawlasGsdDgtvriW 37 q++++ltGH ++v +l +s ++++++Gs+D+ v+++ sp|Q9QXL1|KI21B_MOUSE 1446 QPIGKLTGHiGPVMCLTvtqTSNQHDLVVTGSKDHYVKMF 1485 8999*************9999999999**********986 PP == domain 5 score: 7.4 bits; conditional E-value: 0.13 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 H +++ +l g+ l+sGs+D+ ++ Wd sp|Q9QXL1|KI21B_MOUSE 1504 PHyDGIECL--AIQGDILFSGSRDNGIKKWD 1532 577779999..44788899***********9 PP == domain 6 score: 11.3 bits; conditional E-value: 0.0075 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++ +H ++v++laf p ++l+s+++ g +++W+ sp|Q9QXL1|KI21B_MOUSE 1541 QIPNAHkDWVCALAFVPGRPMLLSACRAGFIKVWN 1575 66789*666*************************8 PP == domain 7 score: 19.3 bits; conditional E-value: 2.3e-05 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++++++GH s+++++++++ + + ++s D+ v++W+ sp|Q9QXL1|KI21B_MOUSE 1581 PIGEIKGHdSPINAICTNSKHIF--TASSDCRVKLWN 1615 78899***888****66555555..5555*******8 PP >> sp|Q9JJ66|CDC20_MOUSE Cell division cycle protein 20 homolog OS=Mus musculus OX=10090 GN=Cdc20 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.3 0.2 2.5 2.2e+02 21 38 .] 194 210 .. 188 210 .. 0.72 2 ? 8.5 0.0 0.055 4.7 13 38 .] 229 254 .. 219 254 .. 0.88 3 ? 6.5 0.8 0.23 20 3 35 .. 260 291 .. 258 294 .. 0.76 4 ! 29.2 0.5 1.7e-08 1.4e-06 3 37 .. 301 336 .. 299 336 .. 0.92 5 ! 23.5 0.4 1e-06 8.7e-05 2 38 .] 346 386 .. 345 386 .. 0.79 6 ! 11.8 0.4 0.0052 0.44 2 38 .] 391 429 .. 390 429 .. 0.87 7 ! 22.0 0.0 3.1e-06 0.00026 4 37 .. 436 470 .. 433 471 .. 0.90 Alignments for each domain: == domain 1 score: 3.3 bits; conditional E-value: 2.5 TSSEEEEEETTSEEEEEE CS WD40 21 dgawlasGsdDgtvriWd 38 +g+ la + D++v++W+ sp|Q9JJ66|CDC20_MOUSE 194 SGNVLAVAL-DNSVYLWN 210 344456667.*******8 PP == domain 2 score: 8.5 bits; conditional E-value: 0.055 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 ++s+a+ ++g++la G+ + v +Wd sp|Q9JJ66|CDC20_MOUSE 229 ISSVAWIKEGNYLAVGTSNAEVQLWD 254 99**************66*******9 PP == domain 3 score: 6.5 bits; conditional E-value: 0.23 EEEEEESS.SSEEEEEEETTSSE....EEEEETTSEEE CS WD40 3 clrtltGH.ssvtslafspdgaw....lasGsdDgtvr 35 lr t H v+sl +w l+sGs+ g+++ sp|Q9JJ66|CDC20_MOUSE 260 RLRNMTSHsARVSSL------SWnsyiLSSGSRSGHIH 291 5788899*445****......5555558999*999996 PP == domain 4 score: 29.2 bits; conditional E-value: 1.7e-08 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 ++ tl+GH + v++l++ pdg+ lasG+ D+ v +W sp|Q9JJ66|CDC20_MOUSE 301 HVATLSGHsQEVCGLRWAPDGRHLASGGNDNIVNVW 336 5789****666************************* PP == domain 5 score: 23.5 bits; conditional E-value: 1e-06 EEEEEEESS.SSEEEEEEETTSSE.EEEE..ETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw.lasG..sdDgtvriWd 38 +l+t+t H + v ++a++p ++ la+G + D+++riW+ sp|Q9JJ66|CDC20_MOUSE 346 APLQTFTQHqGAVKAVAWCPWQSNiLATGggTSDRHIRIWN 386 689******777****88877777456874425*******8 PP == domain 6 score: 11.8 bits; conditional E-value: 0.0052 EEEEEEESSSSEEEEEEETTSSEEEEEE..TTSEEEEEE CS WD40 2 qclrtltGHssvtslafspdgawlasGs..dDgtvriWd 38 cl + Hs v+s+ +sp+ + l+sG+ + + iW+ sp|Q9JJ66|CDC20_MOUSE 391 ACLSAVDVHSQVCSILWSPHYKELISGHgfAQNQLVIWK 429 68888899*88****************645699999995 PP == domain 7 score: 22.0 bits; conditional E-value: 3.1e-06 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 + +l+GH v +l spdga +as+ D t+r+W sp|Q9JJ66|CDC20_MOUSE 436 VAELKGHtARVLGLTMSPDGATVASAAADETLRLW 470 6789***666**************9989******* PP >> sp|Q8C6G8|WDR26_MOUSE WD repeat-containing protein 26 OS=Mus musculus OX=10090 GN=Wdr26 PE=1 SV=3 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 26.1 0.2 1.6e-07 1.3e-05 4 37 .. 328 362 .. 325 363 .. 0.94 2 ! 18.3 0.1 4.5e-05 0.0038 2 32 .. 372 404 .. 371 411 .. 0.82 3 ! 12.2 0.0 0.004 0.34 9 30 .. 424 446 .. 415 460 .. 0.81 4 ! 14.4 0.1 0.00078 0.066 13 37 .. 554 578 .. 540 579 .. 0.80 5 ! 26.5 0.0 1.2e-07 1e-05 3 37 .. 585 621 .. 583 621 .. 0.78 Alignments for each domain: == domain 1 score: 26.1 bits; conditional E-value: 1.6e-07 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +++lt H + v+ ++fs dg+ la+Gs+D tv iW sp|Q8C6G8|WDR26_MOUSE 328 QQILTEHcNEVWFCKFSNDGTKLATGSKDTTVIIW 362 7899***888************************* PP == domain 2 score: 18.3 bits; conditional E-value: 4.5e-05 EEEEEEESS.SSEEEEEEETTSSEEEEEE.TTS CS WD40 2 qclrtltGH.ssvtslafspdgawlasGs.dDg 32 ++l+tl+GH +v+ +a+spd ++l++++ dD+ sp|Q8C6G8|WDR26_MOUSE 372 KLLKTLEGHaYGVSYIAWSPDDSYLVACGpDDC 404 6899*****666**************9984444 PP == domain 3 score: 12.2 bits; conditional E-value: 0.004 SS.SSEEEEEEETTSSEEEEEET CS WD40 9 GH.ssvtslafspdgawlasGsd 30 H +s ts+a++pdg+ +++G+ sp|Q8C6G8|WDR26_MOUSE 424 SHeDSLTSVAWNPDGKRFVTGGQ 446 69888****************83 PP == domain 4 score: 14.4 bits; conditional E-value: 0.00078 EEEEEEETTSSEEEEEETTSEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriW 37 ++s+ ++ +++asGs+D++v+iW sp|Q8C6G8|WDR26_MOUSE 554 IHSCFGGHNEDFIASGSEDHKVYIW 578 767778889999************* PP == domain 5 score: 26.5 bits; conditional E-value: 1.2e-07 EEEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw.lasGsdDgtvriW 37 ++ +ltGH v++++++p + +as+sdDgtvriW sp|Q8C6G8|WDR26_MOUSE 585 PIAELTGHtRTVNCVSWNPQIPSmMASASDDGTVRIW 621 57789***555****6655555555788********* PP >> sp|Q9R1K5|FZR1_MOUSE Fizzy-related protein homolog OS=Mus musculus OX=10090 GN=Fzr1 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 12.7 0.8 0.0027 0.23 10 38 .] 230 257 .. 206 257 .. 0.86 2 ? 9.9 0.0 0.02 1.7 1 34 [. 261 293 .. 261 297 .. 0.78 3 ! 27.2 0.0 7.1e-08 6.1e-06 5 38 .] 307 341 .. 303 341 .. 0.92 4 ! 19.9 0.0 1.4e-05 0.0012 3 38 .] 347 386 .. 345 386 .. 0.84 5 ? 5.1 0.1 0.66 56 9 38 .] 399 429 .. 387 429 .. 0.71 6 ! 18.3 0.0 4.7e-05 0.004 4 38 .] 436 471 .. 433 471 .. 0.88 Alignments for each domain: == domain 1 score: 12.7 bits; conditional E-value: 0.0027 SSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 HssvtslafspdgawlasGsdDgtvriWd 38 svts+ +s g+++a G+ +g v iWd sp|Q9R1K5|FZR1_MOUSE 230 D-SVTSVGWSERGNLVAVGTHKGFVQIWD 257 3.699999***********88*******9 PP == domain 2 score: 9.9 bits; conditional E-value: 0.02 TEEEEEEESS.SSEEEEEEETTSSE....EEEEETTSEE CS WD40 1 gqclrtltGH.ssvtslafspdgaw....lasGsdDgtv 34 g++l l+GH v +la w l+sGs+D+ + sp|Q9R1K5|FZR1_MOUSE 261 GKKLSMLEGHtARVGALA------WnadqLSSGSRDRMI 293 5788999***666****5......44444779****988 PP == domain 3 score: 27.2 bits; conditional E-value: 7.1e-08 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 r l GH + v++l++s d+++lasG+ D+++ +W+ sp|Q9R1K5|FZR1_MOUSE 307 RRLQGHrQEVCGLKWSTDHQLLASGGNDNKLLVWN 341 6799**999*************************8 PP == domain 4 score: 19.9 bits; conditional E-value: 1.4e-05 EEEEEESS.SSEEEEEEETTSSEEE.EEE..TTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawla.sGs..dDgtvriWd 38 +++ +t H v ++a+sp+++ l+ sG+ D+ +r+W+ sp|Q9R1K5|FZR1_MOUSE 347 PVQQYTEHlAAVKAIAWSPHQHGLLaSGGgtADRCIRFWN 386 78999***999************752664447*******8 PP == domain 5 score: 5.1 bits; conditional E-value: 0.66 SSSSEEEEEEETTSSEEEEE...ETTSEEEEEE CS WD40 9 GHssvtslafspdgawlasG...sdDgtvriWd 38 G v+ la+s++ + l+s s + + +W+ sp|Q9R1K5|FZR1_MOUSE 399 GS-QVCNLAWSKHANELVSThgyS-QNQILVWK 429 33.5999*9*********953233.99999995 PP == domain 6 score: 18.3 bits; conditional E-value: 4.7e-05 EEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 + +ltGHs v la spdg +++G D t+r+W+ sp|Q9R1K5|FZR1_MOUSE 436 VAKLTGHSYrVLYLAMSPDGEAIVTGAGDETLRFWN 471 6789***558****************66*******8 PP >> sp|Q7TNG5|EMAL2_MOUSE Echinoderm microtubule-associated protein-like 2 OS=Mus musculus OX=10090 GN=Eml2 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.5 0.1 0.00034 0.029 2 38 .] 96 143 .. 95 143 .. 0.78 2 ? 6.3 0.3 0.29 25 13 38 .] 162 191 .. 148 191 .. 0.71 3 ? 3.9 0.0 1.6 1.4e+02 20 38 .] 215 233 .. 202 233 .. 0.75 4 ? 5.7 0.0 0.44 38 7 37 .. 246 278 .. 240 278 .. 0.82 5 ! 12.2 0.0 0.004 0.34 9 37 .. 292 321 .. 284 321 .. 0.86 6 ! 14.4 0.1 0.00076 0.065 8 38 .] 374 405 .. 365 405 .. 0.89 7 ! 15.7 0.1 0.00029 0.025 9 37 .. 459 487 .. 449 488 .. 0.81 8 ! 14.4 1.3 0.00078 0.067 4 38 .] 499 534 .. 497 534 .. 0.86 9 ? 5.4 0.1 0.55 47 11 31 .. 574 593 .. 564 596 .. 0.83 10 ! 18.3 0.5 4.5e-05 0.0038 3 37 .. 610 646 .. 608 647 .. 0.86 Alignments for each domain: == domain 1 score: 15.5 bits; conditional E-value: 0.00034 EEEEEEESS.SSEEEEEEETTSSEEEEE...ET.......TSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasG...sd.......DgtvriWd 38 q +r++ GH +++ +la++pd +a+G + ++vr+Wd sp|Q7TNG5|EMAL2_MOUSE 96 QRQRHYLGHnDDIKCLAVHPDMVTIATGqvaGTtkegkplPPHVRVWD 143 779******666*************99754322456777788888887 PP == domain 2 score: 6.3 bits; conditional E-value: 0.29 EEEEE..EETTSSEEEEE...ETTSEEEEEE CS WD40 13 vtsla..fspdgawlasG...sdDgtvriWd 38 v+++a s g++l+ + s D+ + +Wd sp|Q7TNG5|EMAL2_MOUSE 162 VCCVAfsKSNGGNLLC-AvdeSNDHVLSVWD 191 9999965555555565.545656*******9 PP == domain 3 score: 3.9 bits; conditional E-value: 1.6 TTSSE.EEEEETTSEEEEEE CS WD40 20 pdgaw.lasGsdDgtvriWd 38 p + l++++ + ++++W+ sp|Q7TNG5|EMAL2_MOUSE 215 PTDPSlLITCG-KSHIYFWS 233 44444178***.*******5 PP == domain 4 score: 5.7 bits; conditional E-value: 0.44 EESS.SS..EEEEEEETTSSEEEEEETTSEEEEE CS WD40 7 ltGH.ss..vtslafspdgawlasGsdDgtvriW 37 ++ H ++ v ++ f g+ + +G+ g++++W sp|Q7TNG5|EMAL2_MOUSE 246 FEKHeKPkyVLCVTFLEGGDVV-TGDSGGNLYVW 278 677987788****999999996.7*66******9 PP == domain 5 score: 12.2 bits; conditional E-value: 0.004 SS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriW 37 +H ++v +l+ +dg++++ G++D+ v +W sp|Q7TNG5|EMAL2_MOUSE 292 AHdGGVFALCALRDGTLVSGGGRDRRVVLW 321 79777************97668******** PP == domain 6 score: 14.4 bits; conditional E-value: 0.00076 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 GH ++la++p+ a +++++ D+ v++W+ sp|Q7TNG5|EMAL2_MOUSE 374 QGHvEELWGLATHPSRAQFVTCGQDKLVHLWS 405 5998889************************5 PP == domain 7 score: 15.7 bits; conditional E-value: 0.00029 SSSSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 9 GHssvtslafspdgawlasGsdDgtvriW 37 G ++ ++fspdga+la Gs D+ v+++ sp|Q7TNG5|EMAL2_MOUSE 459 GNEQISVVSFSPDGAYLAVGSHDNLVYVY 487 333387889***********99**99987 PP == domain 8 score: 14.4 bits; conditional E-value: 0.00078 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 l++++GH s++t+l++ +d++ +++ s D + Wd sp|Q7TNG5|EMAL2_MOUSE 499 LGKCSGHsSFITHLDWAQDSTCFVTNSGDYEILYWD 534 67899**777************997555****9998 PP == domain 9 score: 5.4 bits; conditional E-value: 0.55 SSEEEEEEETTSSEEEEEETT CS WD40 11 ssvtslafspdgawlasGsdD 31 ++++++a s+dg++l+s++ D sp|Q7TNG5|EMAL2_MOUSE 574 TDINAVARSHDGKLLVSAD-D 593 36*************9876.6 PP == domain 10 score: 18.3 bits; conditional E-value: 4.5e-05 EEEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw.lasGsdDgtvriW 37 + +++ GH s+vt +af d ++ l++G++D +v W sp|Q7TNG5|EMAL2_MOUSE 610 LSHKYGGHsSHVTNVAFLWDDSMaLTTGGKDTSVLQW 646 5799****888*****88888885579*********9 PP >> sp|Q60972|RBBP4_MOUSE Histone-binding protein RBBP4 OS=Mus musculus OX=10090 GN=Rbbp4 PE=1 SV=5 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 14.6 0.3 0.00065 0.055 7 38 .] 173 206 .. 167 206 .. 0.72 2 ! 13.3 0.3 0.0018 0.15 5 38 .] 221 256 .. 218 256 .. 0.74 3 ! 30.9 0.0 4.8e-09 4.1e-07 2 38 .] 264 302 .. 263 302 .. 0.90 4 ! 21.2 0.1 5.3e-06 0.00046 4 38 .] 310 346 .. 308 346 .. 0.85 5 ! 19.0 0.1 2.7e-05 0.0023 4 37 .. 367 402 .. 364 403 .. 0.85 Alignments for each domain: == domain 1 score: 14.6 bits; conditional E-value: 0.00065 EESS..SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 7 ltGH..ssvtslafspdgaw.lasGsdDgtvriWd 38 l+GH + ++l+++p+ + l+s+sdD+t+ +Wd sp|Q60972|RBBP4_MOUSE 173 LRGHqkEG-YGLSWNPNLSGhLLSASDDHTICLWD 206 56775333.577777766665569999*******9 PP == domain 2 score: 13.3 bits; conditional E-value: 0.0018 EEEESSSS.EEEEEEETTSSE......EEEEE..TTSEEEEEE CS WD40 5 rtltGHss.vtslafspdgaw......lasGs..dDgtvriWd 38 +++tGH+ v ++ +w l+ Gs dD++++iWd sp|Q60972|RBBP4_MOUSE 221 TIFTGHTAvVEDV------SWhllhesLF-GSvaDDQKLMIWD 256 579***7757***......5544444488.76458*******9 PP == domain 3 score: 30.9 bits; conditional E-value: 4.8e-09 EEEEEEESS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawl.asGsdDgtvriWd 38 ++ ++ ++H v++l+f+p++ ++ a+Gs D+tv +Wd sp|Q60972|RBBP4_MOUSE 264 KPSHSVDAHtAEVNCLSFNPYSEFIlATGSADKTVALWD 302 68899****777************6379**********9 PP == domain 4 score: 21.2 bits; conditional E-value: 5.3e-06 EEEEESSSS.EEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 4 lrtltGHss.vtslafspdgawla.sGsdDgtvriWd 38 l++++ H++ + +++sp++ ++ s++ D+ + +Wd sp|Q60972|RBBP4_MOUSE 310 LHSFESHKDeIFQVQWSPHNETILaSSGTDRRLNVWD 346 89*****556************7525567*******9 PP == domain 5 score: 19.0 bits; conditional E-value: 2.7e-05 EEEEESS.SSEEEEEEETTSSEEEEE.ETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasG.sdDgtvriW 37 l + GH +++++++p+ +w++++ s+D+ +W sp|Q60972|RBBP4_MOUSE 367 LFIHGGHtAKISDFSWNPNEPWVICSvSEDNIMQVW 402 56667**666************9977799****999 PP >> sp|Q60973|RBBP7_MOUSE Histone-binding protein RBBP7 OS=Mus musculus OX=10090 GN=Rbbp7 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 13.7 0.4 0.0013 0.11 15 38 .] 181 205 .. 166 205 .. 0.60 2 ! 14.5 0.2 0.00073 0.063 6 38 .] 221 255 .. 217 255 .. 0.75 3 ! 28.6 0.0 2.6e-08 2.2e-06 3 38 .] 264 301 .. 262 301 .. 0.86 4 ! 21.4 0.2 4.8e-06 0.00041 4 38 .] 309 345 .. 307 345 .. 0.85 5 ! 19.9 0.1 1.5e-05 0.0013 4 37 .. 366 401 .. 363 402 .. 0.85 Alignments for each domain: == domain 1 score: 13.7 bits; conditional E-value: 0.0013 EEEEETTSSE...EEEEETTSEEEEEE CS WD40 15 slafspdgaw...lasGsdDgtvriWd 38 +l+++++ + l+s+sdD+tv +Wd sp|Q60973|RBBP7_MOUSE 181 GLSWNSN--LsghLLSASDDHTVCLWD 205 4432222..1334568999*******9 PP == domain 2 score: 14.5 bits; conditional E-value: 0.00073 EEESSSS.EEEEEEETTSSEEEEEE..TTSEEEEEE CS WD40 6 tltGHss.vtslafspdgawlasGs..dDgtvriWd 38 ++tGHs v ++a++ + l+ Gs dD++++iWd sp|Q60973|RBBP7_MOUSE 221 IFTGHSAvVEDVAWHLLHESLF-GSvaDDQKLMIWD 255 79***7767***5544444488.76458*******9 PP == domain 3 score: 28.6 bits; conditional E-value: 2.6e-08 EEEEEESS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawl.asGsdDgtvriWd 38 + + ++H v++l+f+p++ ++ a+Gs D+tv +Wd sp|Q60973|RBBP7_MOUSE 264 PSHLVDAHtAEVNCLSFNPYSEFIlATGSADKTVALWD 301 5677789*666************6379**********9 PP == domain 4 score: 21.4 bits; conditional E-value: 4.8e-06 EEEEESSSS.EEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 4 lrtltGHss.vtslafspdgawla.sGsdDgtvriWd 38 l+t++ H++ + + +sp++ ++ s++ D+ + +Wd sp|Q60973|RBBP7_MOUSE 309 LHTFESHKDeIFQVHWSPHNETILaSSGTDRRLNVWD 345 8******556************7525567*******9 PP == domain 5 score: 19.9 bits; conditional E-value: 1.5e-05 EEEEESS.SSEEEEEEETTSSEEEEE.ETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasG.sdDgtvriW 37 l + GH +++++++p+ +w++++ s+D+ iW sp|Q60973|RBBP7_MOUSE 366 LFIHGGHtAKISDFSWNPNEPWVICSvSEDNIMQIW 401 56667**666************9977799******* PP >> sp|Q8VC03|EMAL3_MOUSE Echinoderm microtubule-associated protein-like 3 OS=Mus musculus OX=10090 GN=Eml3 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.9 0.2 1.7e-06 0.00014 4 38 .] 299 344 .. 296 344 .. 0.80 2 ? 4.8 0.4 0.84 72 13 38 .] 409 434 .. 383 434 .. 0.71 3 ? 2.3 0.0 5.1 4.4e+02 13 37 .. 463 486 .. 450 486 .. 0.78 4 ? 8.5 0.0 0.056 4.8 9 37 .. 513 542 .. 503 542 .. 0.85 5 ! 18.7 0.3 3.3e-05 0.0028 7 38 .] 594 626 .. 590 626 .. 0.88 6 ? 10.0 0.0 0.019 1.6 16 37 .. 687 708 .. 672 709 .. 0.85 7 ! 18.6 0.6 3.6e-05 0.0031 9 38 .] 725 755 .. 716 755 .. 0.86 8 ! 20.5 0.2 9.5e-06 0.00081 3 37 .. 832 868 .. 830 869 .. 0.91 Alignments for each domain: == domain 1 score: 22.9 bits; conditional E-value: 1.7e-06 EEEEESS.SSEEEEEEETTSSEEEEE...ET.......TSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasG...sd.......DgtvriWd 38 +r+++GH ++v++la++pdg +asG + + v+iWd sp|Q8VC03|EMAL3_MOUSE 299 QRHYRGHtDCVRCLAVHPDGVRVASGqtaGVdkdgkplQPVVHIWD 344 89*****777**************9874432466778888888887 PP == domain 2 score: 4.8 bits; conditional E-value: 0.84 EEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 13 vtslafspdgaw.lasGsdDgtvriWd 38 v ++ fsp + +++++ + +v++W+ sp|Q8VC03|EMAL3_MOUSE 409 VLAVGFSPRDSScIVTSG-KSHVHFWN 434 555554444444388999.*******8 PP == domain 3 score: 2.3 bits; conditional E-value: 5.1 EEEEEEETTSSEEEEEETTSEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriW 37 + ++ f pdg+ l +G+ g++ W sp|Q8VC03|EMAL3_MOUSE 463 IPCFVFLPDGDIL-TGDSEGNILTW 486 66889*******8.79558888655 PP == domain 4 score: 8.5 bits; conditional E-value: 0.056 SS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriW 37 +H +s+ +l+ +dg+ l+ G++D+ + W sp|Q8VC03|EMAL3_MOUSE 513 AHeGSIFALCLRRDGTVLSGGGRDRRLVQW 542 68888************97678****9999 PP == domain 5 score: 18.7 bits; conditional E-value: 3.3e-05 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + GH + ++l+++p+++ +++++ D+ + +Wd sp|Q8VC03|EMAL3_MOUSE 594 IQGHtDELWGLCTHPSQNRFLTCGHDRQLCLWD 626 56**666************998877*******9 PP == domain 6 score: 10.0 bits; conditional E-value: 0.019 EEEETTSSEEEEEETTSEEEEE CS WD40 16 lafspdgawlasGsdDgtvriW 37 +++spdg +la Gs D+ ++i+ sp|Q8VC03|EMAL3_MOUSE 687 VRYSPDGLYLAIGSHDNMIYIY 708 459**********99*****98 PP == domain 7 score: 18.6 bits; conditional E-value: 3.6e-05 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 GH s++t+l++s+dg++++s s D + Wd sp|Q8VC03|EMAL3_MOUSE 725 GHsSFITHLDWSKDGNFIMSNSGDYEILYWD 755 9*777*************97555*****998 PP == domain 8 score: 20.5 bits; conditional E-value: 9.5e-06 EEEEEESS.SSEEEEEEETTSSEEEE.EETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlas.GsdDgtvriW 37 + r ++GH s+vts++f +d ++l+s G++D ++ W sp|Q8VC03|EMAL3_MOUSE 832 PSRMYSGHgSHVTSVRFTHDDSYLVSlGGKDASIFQW 868 6789****999*************98899*****999 PP >> sp|P97865|PEX7_MOUSE Peroxisomal targeting signal 2 receptor OS=Mus musculus OX=10090 GN=Pex7 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 12.6 0.8 0.0029 0.25 11 38 .] 63 91 .. 51 91 .. 0.74 2 ! 26.3 0.1 1.4e-07 1.2e-05 3 38 .] 98 136 .. 97 136 .. 0.87 3 ! 18.9 0.4 2.9e-05 0.0025 2 38 .] 141 179 .. 140 179 .. 0.73 4 ! 11.7 0.2 0.0057 0.48 7 38 .] 189 222 .. 184 222 .. 0.83 5 ! 24.7 0.0 4.3e-07 3.7e-05 2 38 .] 228 266 .. 227 266 .. 0.87 6 ? 3.9 0.0 1.6 1.3e+02 25 38 .] 297 310 .. 273 310 .. 0.75 Alignments for each domain: == domain 1 score: 12.6 bits; conditional E-value: 0.0029 SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 11 ssvtslafspdgaw.lasGsdDgtvriWd 38 ++ ++ +s ++ l+++s Dg++ +Wd sp|P97865|PEX7_MOUSE 63 DGLFDVTWSENNEHvLVTCSGDGSLQLWD 91 347789899999994468877*******9 PP == domain 2 score: 26.3 bits; conditional E-value: 1.4e-07 EEEEEESS.SSEEEEEEETTSSE........EEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw........lasGsdDgtvriWd 38 +l++++ H + v+s+ +w ++sGs+D+tv++Wd sp|P97865|PEX7_MOUSE 98 PLQVYKEHtQEVYSV------DWsqtrgeqlVVSGSWDQTVKVWD 136 6899****878****......777777779788***********9 PP == domain 3 score: 18.9 bits; conditional E-value: 2.9e-05 EEEEEEESSSS.EEEEEEETTSSE.......EEEEETTSEEEEEE CS WD40 2 qclrtltGHss.vtslafspdgaw.......lasGsdDgtvriWd 38 + l t++GH s ++s w +as+s D+t+riWd sp|P97865|PEX7_MOUSE 141 NSLCTFRGHESvIYST------IWsphipgcFASASGDQTLRIWD 179 67899****6646877......455555556677766*******9 PP == domain 4 score: 11.7 bits; conditional E-value: 0.0057 EESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 + +H + + s+++++++ l+ +G D+++r Wd sp|P97865|PEX7_MOUSE 189 IPAHqTEILSCDWCKYNENLVvTGAVDCSLRGWD 222 4689777****988888887549999*******8 PP == domain 5 score: 24.7 bits; conditional E-value: 4.3e-07 EEEEEEESSSS.EEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 2 qclrtltGHss.vtslafspdgawl.asGsdDgtvriWd 38 q++ +l GH+ ++ ++fsp +a + as+s+D tvr+W+ sp|P97865|PEX7_MOUSE 228 QPVFELLGHTYaIRRVKFSPFHASVlASCSYDFTVRFWN 266 7899999**446************626899********8 PP == domain 6 score: 3.9 bits; conditional E-value: 1.6 EEEEETTSEEEEEE CS WD40 25 lasGsdDgtvriWd 38 +a +s+D t++i+d sp|P97865|PEX7_MOUSE 297 VADCSWDETIKIYD 310 5558********98 PP >> sp|Q6KAU8|A16L2_MOUSE Autophagy-related protein 16-2 OS=Mus musculus OX=10090 GN=Atg16l2 PE=2 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 28.4 0.0 3e-08 2.5e-06 4 38 .] 333 368 .. 330 368 .. 0.93 2 ! 11.9 0.0 0.0048 0.41 5 37 .. 378 411 .. 375 412 .. 0.87 3 ! 15.1 0.0 0.00045 0.039 5 38 .] 420 454 .. 416 454 .. 0.81 4 ? 9.3 0.2 0.032 2.8 24 38 .] 479 493 .. 463 493 .. 0.81 5 ! 11.7 0.1 0.0055 0.47 3 38 .] 499 534 .. 497 534 .. 0.83 6 ! 11.5 0.3 0.0062 0.53 16 38 .] 558 580 .. 541 580 .. 0.84 7 ? 8.9 0.4 0.044 3.7 10 37 .. 594 622 .. 584 623 .] 0.80 Alignments for each domain: == domain 1 score: 28.4 bits; conditional E-value: 3e-08 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + +l++H s v++++f p++++la+G+ D+ +++W+ sp|Q6KAU8|A16L2_MOUSE 333 QDVLDAHlSEVNAVCFGPNSSLLATGGADRLIHLWN 368 67899**999*************************8 PP == domain 2 score: 11.9 bits; conditional E-value: 0.0048 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +tl+G +s+ts++f+p+g+ ++++++++ +W sp|Q6KAU8|A16L2_MOUSE 378 QTLEGAgGSITSVDFDPSGSQVLAATYNQAAQLW 411 689999888************9999888888888 PP == domain 3 score: 15.1 bits; conditional E-value: 0.00045 EEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGHss.vtslafspdgawlasGsdDgtvriWd 38 tl+GH++ vt+ +f + ++Gs+D+tv+ Wd sp|Q6KAU8|A16L2_MOUSE 420 ETLSGHKDkVTAAKFKLTRHQAVTGSRDRTVKEWD 454 589***666****66555555889**********8 PP == domain 4 score: 9.3 bits; conditional E-value: 0.032 EEEEEETTSEEEEEE CS WD40 24 wlasGsdDgtvriWd 38 ++sG+ D+++r+Wd sp|Q6KAU8|A16L2_MOUSE 479 IIISGHNDQKIRFWD 493 2579**********9 PP == domain 5 score: 11.7 bits; conditional E-value: 0.0055 EEEEEESSSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGHssvtslafspdgawlasGsdDgtvriWd 38 c++++ ++ vtsl s d+ l+s+s+D+t+++ d sp|Q6KAU8|A16L2_MOUSE 499 CIQVIPVQGRVTSLHLSYDQLHLLSCSRDNTLKVID 534 5555555555***********************965 PP == domain 6 score: 11.5 bits; conditional E-value: 0.0062 EEEETTSSEEEEEETTSEEEEEE CS WD40 16 lafspdgawlasGsdDgtvriWd 38 fspd ++ ++Gs +g ++iWd sp|Q6KAU8|A16L2_MOUSE 558 AVFSPDRSYALAGSSNGDLYIWD 580 44*******999*88*******9 PP == domain 7 score: 8.9 bits; conditional E-value: 0.044 S.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvriW 37 H + v+++a++ +g+ ++s + ++v +W sp|Q6KAU8|A16L2_MOUSE 594 HcTAVNAVAWCFSGNHVVSVDQGRKVVLW 622 5556**************99999999999 PP >> sp|Q9QZD9|EIF3I_MOUSE Eukaryotic translation initiation factor 3 subunit I OS=Mus musculus OX=10090 GN=Eif3i PE=1 SV # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 13.9 0.0 0.0011 0.095 7 37 .. 6 37 .. 3 37 .. 0.94 2 ! 27.3 1.6 6.7e-08 5.7e-06 2 38 .] 43 80 .. 42 80 .. 0.86 3 ! 11.6 0.0 0.006 0.51 7 38 .] 184 216 .. 178 216 .. 0.86 4 ? 2.3 0.0 5.2 4.5e+02 3 26 .. 222 245 .. 220 254 .. 0.77 5 ! 25.2 0.0 3e-07 2.5e-05 6 36 .. 280 311 .. 275 312 .. 0.90 Alignments for each domain: == domain 1 score: 13.9 bits; conditional E-value: 0.0011 EESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriW 37 l GH s+t ++++++g++l++ +D+ v +W sp|Q9QZD9|EIF3I_MOUSE 6 LQGHeRSITQIKYNREGDLLFTVAKDPIVNVW 37 67**888************************* PP == domain 2 score: 27.3 bits; conditional E-value: 6.7e-08 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + l+t+ GH + v++++ + d + +++Gs D+++r+Wd sp|Q9QZD9|EIF3I_MOUSE 43 ERLGTYMGHtGAVWCVDADWDTKHVLTGSADNSCRLWD 80 5689999**777****7777777799***********9 PP == domain 3 score: 11.6 bits; conditional E-value: 0.006 EESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGHss.vtslafspdgawlasGsdDgtvriWd 38 + Hs +++++ s+d ++++++s+D+t +++d sp|Q9QZD9|EIF3I_MOUSE 184 VKEHSRqINDIQLSRDMTMFVTASKDNTAKLFD 216 5789446************************98 PP == domain 4 score: 2.3 bits; conditional E-value: 5.2 EEEEEESSSSEEEEEEETTSSEEE CS WD40 3 clrtltGHssvtslafspdgawla 26 +++t+++ +v+s a sp+ + ++ sp|Q9QZD9|EIF3I_MOUSE 222 HQKTFRTERPVNSAALSPNYDHVV 245 5677776667***********976 PP == domain 5 score: 25.2 bits; conditional E-value: 3e-07 EEESS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvri 36 +GH ++++s+af+pdg+ +sG++Dg vri sp|Q9QZD9|EIF3I_MOUSE 280 RVKGHfGPINSVAFHPDGKSYSSGGEDGYVRI 311 568**888************999********9 PP >> sp|Q8VE80|THOC3_MOUSE THO complex subunit 3 OS=Mus musculus OX=10090 GN=Thoc3 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 21.2 0.2 5.7e-06 0.00049 3 36 .. 47 81 .. 42 82 .. 0.86 2 ! 25.6 0.3 2.2e-07 1.9e-05 6 38 .] 94 128 .. 89 128 .. 0.84 3 ? 9.0 0.0 0.039 3.4 13 34 .. 145 165 .. 132 169 .. 0.75 4 ! 23.5 0.0 1e-06 9e-05 2 38 .] 215 252 .. 214 252 .. 0.91 5 ! 12.0 0.1 0.0044 0.38 12 33 .. 268 289 .. 257 291 .. 0.81 6 ? 1.8 0.0 7.6 6.5e+02 15 32 .. 312 329 .. 304 332 .. 0.79 Alignments for each domain: == domain 1 score: 21.2 bits; conditional E-value: 5.7e-06 EEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEE CS WD40 3 clrtltGHss.vtslafspdgawlasGsdDgtvri 36 ++r++ +Hs v+s+a+s dg+ lasGs D+t + sp|Q8VE80|THOC3_MOUSE 47 KTREFPAHSAkVHSVAWSCDGRRLASGSFDKTASV 81 5788999*446*****************9**9765 PP == domain 2 score: 25.6 bits; conditional E-value: 2.2e-07 EEESS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawl.asGsdDgtvriWd 38 ++GH +sv l+++p+++ l +++s D+t+riWd sp|Q8VE80|THOC3_MOUSE 94 NYRGHgDSVDQLCWHPSNPDLfVTASGDKTIRIWD 128 599**888*****99999997346666*******9 PP == domain 3 score: 9.0 bits; conditional E-value: 0.039 EEEEEEETTSSEEEEEETTSEE CS WD40 13 vtslafspdgawlasGsdDgtv 34 + +++spdg+ +a G +D v sp|Q8VE80|THOC3_MOUSE 145 I-NICWSPDGQTIAVGNKDDVV 165 6.789***********988766 PP == domain 4 score: 23.5 bits; conditional E-value: 1e-06 EEEEEEESS..SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH..ssvtslafspdgawlasGsdDgtvriWd 38 ++++++ +H +++ +++f+p g+++a+Gs D v +Wd sp|Q8VE80|THOC3_MOUSE 215 KPVQSINAHpsNCI-CIKFDPMGKYFATGSADALVSLWD 252 6899999**95558.***********************9 PP == domain 5 score: 12.0 bits; conditional E-value: 0.0044 SEEEEEEETTSSEEEEEETTSE CS WD40 12 svtslafspdgawlasGsdDgt 33 +v+ l+fs+dg++las+s+D+ sp|Q8VE80|THOC3_MOUSE 268 PVRTLSFSHDGKMLASASEDHF 289 389999*************996 PP == domain 6 score: 1.8 bits; conditional E-value: 7.6 EEEEETTSSEEE.EEETTS CS WD40 15 slafspdgawla.sGsdDg 32 +a++p ++la +++ D+ sp|Q8VE80|THOC3_MOUSE 312 TVAWHPKRPLLAfACD-DK 329 589*******986775.43 PP >> sp|Q05BC3|EMAL1_MOUSE Echinoderm microtubule-associated protein-like 1 OS=Mus musculus OX=10090 GN=Eml1 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 20.2 0.6 1.2e-05 0.00099 2 38 .] 261 308 .. 260 308 .. 0.79 2 ? 5.3 0.8 0.57 49 12 38 .] 324 356 .. 312 356 .. 0.65 3 ? 2.9 0.1 3.4 3e+02 13 37 .. 373 397 .. 364 398 .. 0.76 4 ? 9.4 0.0 0.029 2.5 11 37 .. 418 443 .. 406 443 .. 0.84 5 ? 9.2 0.0 0.034 2.9 9 38 .] 457 487 .. 448 487 .. 0.87 6 ! 12.3 0.3 0.0036 0.31 7 38 .] 538 570 .. 527 570 .. 0.83 7 ! 12.4 0.0 0.0033 0.29 16 37 .. 631 652 .. 614 652 .. 0.81 8 ! 17.3 0.7 9.7e-05 0.0083 4 37 .. 664 698 .. 661 699 .. 0.83 9 ! 22.3 0.7 2.5e-06 0.00022 3 37 .. 775 811 .. 773 812 .. 0.83 Alignments for each domain: == domain 1 score: 20.2 bits; conditional E-value: 1.2e-05 EEEEEEESS.SSEEEEEEETTSSEEEEE.....ET.....TSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasG.....sd.....DgtvriWd 38 q++r++ GH ++v +la++pd +a+G s+ ++vriWd sp|Q05BC3|EMAL1_MOUSE 261 QLQRHYAGHnDDVKCLAVHPDRITIATGqvagtSKdgkqlPPHVRIWD 308 89*******666*************99755433335667788888887 PP == domain 2 score: 5.3 bits; conditional E-value: 0.57 S..EEEEEEETTSSE..EEEE...ETTSEEEEEE CS WD40 12 s..vtslafspdgaw..lasG...sdDgtvriWd 38 + vt++afs+++ l+ + s D+ + +Wd sp|Q05BC3|EMAL1_MOUSE 324 DraVTCIAFSKSNGGghLC-AvddSNDHVLSVWD 356 3569***966666666354.434445*******9 PP == domain 3 score: 2.9 bits; conditional E-value: 3.4 EEEEEEETTSSEE.EEEETTSEEEEE CS WD40 13 vtslafspdgawl.asGsdDgtvriW 37 v + +f+p + + ++++ + ++++W sp|Q05BC3|EMAL1_MOUSE 373 VFAADFHPTDTNIiVTCG-KSHLYFW 397 55666777777752699*.******* PP == domain 4 score: 9.4 bits; conditional E-value: 0.029 SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriW 37 ++v ++ fs +g+ + +G+ g++ +W sp|Q05BC3|EMAL1_MOUSE 418 KFVLCVTFSENGDTI-TGDSSGNILVW 443 3499**********8.7*66******* PP == domain 5 score: 9.2 bits; conditional E-value: 0.034 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 +H +++ +l+ +dg++++ G++D+ + W+ sp|Q05BC3|EMAL1_MOUSE 457 AHeGGIFALCMLRDGTLVSGGGKDRRLISWN 487 79888************97668*****9997 PP == domain 6 score: 12.3 bits; conditional E-value: 0.0036 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 GH + ++la + +++ +++++ D++ +Wd sp|Q05BC3|EMAL1_MOUSE 538 TQGHtDELWGLAIHASKPQFLTCGHDKHATLWD 570 359*666*****9999999888877*******9 PP == domain 7 score: 12.4 bits; conditional E-value: 0.0033 EEEETTSSEEEEEETTSEEEEE CS WD40 16 lafspdgawlasGsdDgtvriW 37 +++spdg++la Gs D+ ++i+ sp|Q05BC3|EMAL1_MOUSE 631 MRYSPDGNFLAIGSHDNCIYIY 652 458**********99****997 PP == domain 8 score: 17.3 bits; conditional E-value: 9.7e-05 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +++++GH s++t+l++s ++++l+s s D + W sp|Q05BC3|EMAL1_MOUSE 664 VGKCSGHsSFITHLDWSVNSQFLVSNSGDYEILYW 698 56789**777*************975559888877 PP == domain 9 score: 22.3 bits; conditional E-value: 2.5e-06 EEEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtsla.fspdgawlasGsdDgtvriW 37 + ++++GH s+vt ++ + d++++++G++D +++ W sp|Q05BC3|EMAL1_MOUSE 775 PSHIYSGHsSHVTNVDfLCEDSHLISTGGKDTSIMQW 811 789*****888****966666666779********** PP >> sp|Q9D0N7|CAF1B_MOUSE Chromatin assembly factor 1 subunit B OS=Mus musculus OX=10090 GN=Chaf1b PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.3 0.2 0.0004 0.034 10 38 .] 11 45 .. 3 45 .. 0.87 2 ! 17.9 0.0 6.2e-05 0.0054 9 38 .] 64 94 .. 57 94 .. 0.88 3 ! 30.8 0.9 5.2e-09 4.4e-07 2 38 .] 120 157 .. 119 157 .. 0.95 4 ! 17.0 0.0 0.00011 0.0098 1 38 [] 161 199 .. 161 199 .. 0.87 5 ? 10.1 0.3 0.018 1.5 12 34 .. 355 377 .. 340 379 .. 0.83 Alignments for each domain: == domain 1 score: 15.3 bits; conditional E-value: 0.0004 S.SS.EEEEEEETTSSE....EEEEETTSEEEEEE CS WD40 10 H.ss.vtslafspdgaw....lasGsdDgtvriWd 38 H + v+sl+f++ +w las++ D vriW+ sp|Q9D0N7|CAF1B_MOUSE 11 HnKEpVYSLDFQHGATWkihrLASAGVDTAVRIWK 45 75335*************999999999*******6 PP == domain 2 score: 17.9 bits; conditional E-value: 6.2e-05 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 H + v+ ++fsp g lasG+dD + +W+ sp|Q9D0N7|CAF1B_MOUSE 64 RHtKAVNVVRFSPTGEILASGGDDAVILLWK 94 59888*99**********************6 PP == domain 3 score: 30.8 bits; conditional E-value: 5.2e-09 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + ++tl+GH +v+++++ dg++++s+s D+tv iWd sp|Q9D0N7|CAF1B_MOUSE 120 TVVKTLRGHlEDVYDICWATDGNLMTSASVDNTVIIWD 157 5689*********************************9 PP == domain 4 score: 17.0 bits; conditional E-value: 0.00011 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 gq++ ++ H s v ++ ++p g+++a+ s D+ +ri++ sp|Q9D0N7|CAF1B_MOUSE 161 GQKISIFNEHkSYVQGVTWDPLGQYIATLSCDRVLRIYN 199 688999****666*************97455******98 PP == domain 5 score: 10.1 bits; conditional E-value: 0.018 SEEEEEEETTSSEEEEEETTSEE CS WD40 12 svtslafspdgawlasGsdDgtv 34 +++++s+dga+la +s Dg + sp|Q9D0N7|CAF1B_MOUSE 355 TLSDISWSSDGAFLAISSTDGYC 377 478999********98888*976 PP >> sp|Q6NVE8|WDR44_MOUSE WD repeat-containing protein 44 OS=Mus musculus OX=10090 GN=Wdr44 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 19.3 0.1 2.2e-05 0.0019 9 37 .. 511 540 .. 502 540 .. 0.87 2 ! 21.9 0.1 3.3e-06 0.00029 3 37 .. 601 635 .. 599 636 .. 0.85 3 ! 20.0 0.1 1.4e-05 0.0012 2 38 .] 641 678 .. 640 678 .. 0.83 4 ? 6.1 0.0 0.32 28 9 38 .] 692 722 .. 685 722 .. 0.84 5 ? 2.4 0.0 4.7 4e+02 13 38 .] 747 772 .. 730 772 .. 0.67 6 ! 15.0 0.1 0.00048 0.041 13 38 .] 792 816 .. 777 816 .. 0.74 Alignments for each domain: == domain 1 score: 19.3 bits; conditional E-value: 2.2e-05 SS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriW 37 H + v+ ++fs+ g++las++ D+ vriW sp|Q6NVE8|WDR44_MOUSE 511 EHmGAVWTMKFSHCGRLLASAGQDNIVRIW 540 47888************************* PP == domain 2 score: 21.9 bits; conditional E-value: 3.3e-06 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 + +++GH + +l++s++ +l+ +s+D+tvr+W sp|Q6NVE8|WDR44_MOUSE 601 PFCKYKGHtADLLDLSWSKNYFLLS-SSMDKTVRLW 635 56689***88899*******99985.666******* PP == domain 3 score: 20.0 bits; conditional E-value: 1.4e-05 EEEEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 +cl + H ++vt++af+p + ++sGs Dg++r+W+ sp|Q6NVE8|WDR44_MOUSE 641 ECLCCF-QHiDFVTAIAFHPRDDRyFLSGSLDGKLRLWN 678 677777.59999*****7666666688***********8 PP == domain 4 score: 6.1 bits; conditional E-value: 0.32 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 G+ + +t+ f+++g++ + G++Dg + ++d sp|Q6NVE8|WDR44_MOUSE 692 GQtKLITAANFCQNGKYAVIGTYDGRCIFYD 722 6634499999*******999*99***99987 PP == domain 5 score: 2.4 bits; conditional E-value: 4.7 EEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 13 vtslafspdgaw.lasGsdDgtvriWd 38 +t++ p + l+++ D +r++d sp|Q6NVE8|WDR44_MOUSE 747 ITGIEPLPGENKiLVTSN-DSRIRLYD 772 777775555555156655.******98 PP == domain 6 score: 15.0 bits; conditional E-value: 0.00048 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 + +fs+d ++l+sGs+D+ v+iW+ sp|Q6NVE8|WDR44_MOUSE 792 I-KASFSHDFTYLVSGSEDKYVYIWS 816 3.3459*******************5 PP >> sp|Q8BFQ4|WDR82_MOUSE WD repeat-containing protein 82 OS=Mus musculus OX=10090 GN=Wdr82 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 23.3 0.0 1.2e-06 0.0001 6 38 .] 16 49 .. 9 49 .. 0.88 2 ! 25.6 0.0 2.2e-07 1.9e-05 4 38 .] 100 135 .. 97 135 .. 0.90 3 ? 1.6 0.0 8.4 7.2e+02 6 38 .] 146 175 .. 141 175 .. 0.68 4 ? 3.9 0.0 1.6 1.4e+02 14 32 .. 198 215 .. 185 222 .. 0.81 5 ! 21.0 0.0 6.3e-06 0.00054 4 38 .] 229 267 .. 226 267 .. 0.84 6 ? 5.0 0.0 0.71 61 10 27 .. 281 299 .. 272 304 .. 0.73 Alignments for each domain: == domain 1 score: 23.3 bits; conditional E-value: 1.2e-06 EEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGHss.vtslafspdgawlasGsdDgtvriWd 38 +++ s+ +++++fsp+g ++s+sdD ++ ++d sp|Q8BFQ4|WDR82_MOUSE 16 VFRENSDkINCFDFSPNGETVISSSDDDSIVLYD 49 67777456***********************998 PP == domain 2 score: 25.6 bits; conditional E-value: 2.2e-07 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +r + GH + v +l+ sp + ++sGs D+t+r+Wd sp|Q8BFQ4|WDR82_MOUSE 100 IRYFPGHsKRVVALSMSPVDDTFISGSLDKTIRLWD 135 67799**77799***9******9************9 PP == domain 3 score: 1.6 bits; conditional E-value: 8.4 EEESSSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGHssvtslafspdgawlasGsdDgtvriWd 38 +l G +v+s+ +p+g +a+G v+++d sp|Q8BFQ4|WDR82_MOUSE 146 HLQGK-PVCSF--DPEGLIFAAGVNSEMVKLYD 175 45554.67766..*****999996566666665 PP == domain 4 score: 3.9 bits; conditional E-value: 1.6 EEEEEETTSSEEEEEETTS CS WD40 14 tslafspdgawlasGsdDg 32 t+l+fs dg++++ ++ +g sp|Q8BFQ4|WDR82_MOUSE 198 TGLKFSNDGKLILIST-NG 215 89*********98766.44 PP == domain 5 score: 21.0 bits; conditional E-value: 6.3e-06 EEEEESS.SS..E.EEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ss..v.tslafspdgawlasGsdDgtvriWd 38 ++t+ G +s v +f pd+++++ Gs+Dg++++W+ sp|Q8BFQ4|WDR82_MOUSE 229 MHTFGGYaNSkaVtLEASFTPDSQFIMIGSEDGKIHVWN 267 789998886677844777********************8 PP == domain 6 score: 5.0 bits; conditional E-value: 0.71 S.SSEEEEEEETTSSEEEE CS WD40 10 H.ssvtslafspdgawlas 27 H +++t+l+f+p +as sp|Q8BFQ4|WDR82_MOUSE 281 HtGPITCLQFNPKFMTFAS 299 6677****99997666665 PP >> sp|Q8BX17|GEMI5_MOUSE Gem-associated protein 5 OS=Mus musculus OX=10090 GN=Gemin5 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 18.2 0.2 4.8e-05 0.0041 4 38 .] 57 95 .. 54 95 .. 0.72 2 ? 3.2 0.0 2.6 2.3e+02 12 38 .] 151 180 .. 141 180 .. 0.72 3 ! 19.2 0.4 2.3e-05 0.002 2 38 .] 186 255 .. 185 255 .. 0.72 4 ! 11.7 0.1 0.0057 0.49 8 38 .] 329 365 .. 320 365 .. 0.82 5 ? 5.2 0.0 0.64 55 25 38 .] 395 408 .. 375 408 .. 0.75 6 ? 5.8 0.1 0.4 34 12 38 .] 427 455 .. 419 455 .. 0.81 7 ? 1.9 0.0 6.7 5.7e+02 13 37 .. 538 563 .. 528 564 .. 0.85 8 ! 24.0 0.2 7.2e-07 6.2e-05 3 38 .] 631 668 .. 629 668 .. 0.79 9 ? 8.9 0.0 0.041 3.5 2 35 .. 673 708 .. 672 710 .. 0.81 Alignments for each domain: == domain 1 score: 18.2 bits; conditional E-value: 4.8e-05 EEEEESS.SSEEEEE..EETTSSE...EEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtsla..fspdgaw...lasGsdDgtvriWd 38 +++l GH v+++ + a++sdDgtv++Wd sp|Q8BX17|GEMI5_MOUSE 57 VGELVGHtERVSGFTfsH--HPGQynlCATSSDDGTVKVWD 95 67899**666*9998532..333346457899********9 PP == domain 2 score: 3.2 bits; conditional E-value: 2.6 S..EEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 12 s..vtslafspdgawla.sGsdDgtvriWd 38 + + +l sp++ l+ G +Dg v i d sp|Q8BX17|GEMI5_MOUSE 151 PrtIFCLTCSPHHENLVaIGYKDGIVVIID 180 15589999888888875279******9865 PP == domain 3 score: 19.2 bits; conditional E-value: 2.3e-05 EEEEEEESS.SSEEEEE.....................EETTSSE................EEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtsla.....................fspdgaw................lasGsdDgtvriWd 38 + ++ l+GH + ++s+a la+Gs+D+t+riW+ sp|Q8BX17|GEMI5_MOUSE 186 EVIHRLRGHdDEIHSIAwcplsgedclsisqeenseepD-----IpngkliaetpitkgcyLATGSKDQTIRIWS 255 67899****555****87776666666666666666663.....04444477777777777*************5 PP == domain 4 score: 11.7 bits; conditional E-value: 0.0057 ESSSS......EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGHss......vtslafspdgawlasGsdDgtvriWd 38 +GH++ +sl++ + +++l+s s+D+ v+ Wd sp|Q8BX17|GEMI5_MOUSE 329 EGHNHsrivfnLCSLKTEDGKQLLLSTSMDRDVKCWD 365 5996668855557888********99999*******9 PP == domain 5 score: 5.2 bits; conditional E-value: 0.64 EEEE.ETTSEEEEEE CS WD40 25 lasG.sdDgtvriWd 38 la G + Dg +r+W+ sp|Q8BX17|GEMI5_MOUSE 395 LAIGvG-DGMIRVWN 408 566867.*******8 PP == domain 6 score: 5.8 bits; conditional E-value: 0.4 S.EEEEEEETTSSEEEE.EETTSEEEEEE CS WD40 12 s.vtslafspdgawlas.GsdDgtvriWd 38 s vt+l+++p++ ++ G+dDg+v ++d sp|Q8BX17|GEMI5_MOUSE 427 SkVTALCWHPNKEGCLAfGTDDGKVGLYD 455 349***********5443999**998887 PP == domain 7 score: 1.9 bits; conditional E-value: 6.7 E.EEEEEETTSSEEEEEETTSEEEEE CS WD40 13 v.tslafspdgawlasGsdDgtvriW 37 v t +++ dg+ la G +Dg++ i+ sp|Q8BX17|GEMI5_MOUSE 538 VhTEISWKGDGKVLALGNEDGSIEIF 563 448899*******988999****996 PP == domain 8 score: 24.0 bits; conditional E-value: 7.2e-07 EEEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 + rtl+GH +tsla+sp+++ l+s+++Dgt +Wd sp|Q8BX17|GEMI5_MOUSE 631 PYRTLSGHtAKITSLAWSPHHDGrLVSACYDGTAQVWD 668 679*****666*****77666666566666*******9 PP == domain 9 score: 8.9 bits; conditional E-value: 0.041 EEEEEEESS.SSEEEEEEETTSSE.EEEEETTSEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw.lasGsdDgtvr 35 ++l ++GH + ++a+sp + + sG dD v+ sp|Q8BX17|GEMI5_MOUSE 673 EPLFNFRGHrGRLLCVAWSPVDPEcIYSGADDFCVY 708 68999****88899**98888888456999898876 PP >> sp|Q9JHB4|WDR31_MOUSE WD repeat-containing protein 31 OS=Mus musculus OX=10090 GN=Wdr31 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 1.9 0.0 7.1 6.1e+02 16 33 .. 71 84 .. 55 89 .. 0.74 2 ! 18.8 0.0 3.2e-05 0.0028 3 38 .] 95 131 .. 93 131 .. 0.85 3 ! 28.1 0.1 3.7e-08 3.1e-06 5 38 .] 140 174 .. 136 174 .. 0.90 4 ! 18.3 0.0 4.4e-05 0.0038 13 38 .] 191 216 .. 178 216 .. 0.84 5 ? 1.8 0.3 7.2 6.2e+02 10 29 .. 231 249 .. 222 263 .. 0.69 6 ! 16.4 0.0 0.00018 0.015 5 38 .] 272 310 .. 268 310 .. 0.73 Alignments for each domain: == domain 1 score: 1.9 bits; conditional E-value: 7.1 EEEETTSSEEEEEETTSE CS WD40 16 lafspdgawlasGsdDgt 33 l ++++ +sG++D+t sp|Q9JHB4|WDR31_MOUSE 71 L----NSDLCISGGKDKT 84 4....7788899****98 PP == domain 2 score: 18.8 bits; conditional E-value: 3.2e-05 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++ +tGH +t +a p + ++s+s+D+tv +Wd sp|Q9JHB4|WDR31_MOUSE 95 MVKRFTGHeREITKIACIPKANQFFSASRDKTVLMWD 131 57889***666*999988888888899*********9 PP == domain 3 score: 28.1 bits; conditional E-value: 3.7e-08 EEEESSSS..EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGHss..vtslafspdgawlasGsdDgtvriWd 38 + l+GH vt+la+spd++ l++Gs+D+++ +Wd sp|Q9JHB4|WDR31_MOUSE 140 QQLSGH-AmvVTGLAVSPDSSQLCTGSRDNSLLLWD 174 6789**.6668************************9 PP == domain 4 score: 18.3 bits; conditional E-value: 4.4e-05 EEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 13 vtslafspdgawla.sGsdDgtvriWd 38 vt+l++ p+ ++++ + s+D+t+r+Wd sp|Q9JHB4|WDR31_MOUSE 191 VTHLCWVPSEPYIVqT-SEDKTIRLWD 216 9*************77.66*******9 PP == domain 5 score: 1.8 bits; conditional E-value: 7.2 SSSE.EEEEEETTSSEEEEEE CS WD40 10 Hssv.tslafspdgawlasGs 29 H + t++ +s dg+ +s+s sp|Q9JHB4|WDR31_MOUSE 231 H--IqTHCEVSVDGHTCISCS 249 4..666777777888877765 PP == domain 6 score: 16.4 bits; conditional E-value: 0.00018 EEEESS.SSE.EEEEEETTSSE....EEEEETTSEEEEEE CS WD40 5 rtltGH.ssv.tslafspdgaw....lasGsdDgtvriWd 38 +++GH + v +++ f p ++ +a++ D +v+iW+ sp|Q9JHB4|WDR31_MOUSE 272 CEYKGHfQTVaSCV-FLPKSTAlmpmIATSAHDSKVKIWN 310 679***877*5555.66666664776677755*******8 PP >> sp|Q3TLR7|DTL_MOUSE Denticleless protein homolog OS=Mus musculus OX=10090 GN=Dtl PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 12.3 0.1 0.0035 0.3 3 38 .] 90 126 .. 88 126 .. 0.81 2 ! 21.7 0.0 3.9e-06 0.00034 1 38 [] 130 169 .. 130 169 .. 0.88 3 ! 14.1 0.0 0.00097 0.083 12 38 .] 218 244 .. 210 244 .. 0.87 4 ! 16.4 0.0 0.00018 0.016 3 38 .] 307 345 .. 305 345 .. 0.90 5 ! 24.2 0.9 6e-07 5.2e-05 5 37 .. 354 388 .. 350 389 .. 0.84 Alignments for each domain: == domain 1 score: 12.3 bits; conditional E-value: 0.0035 EEEEEESS.SSEEEEEEETTSSEEEEE.ETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasG.sdDgtvriWd 38 c +++ +H + v +la+ p l+++ + D+t ++Wd sp|Q3TLR7|DTL_MOUSE 90 CFKEWMAHwNAVFDLAWVPGELKLVTAaG-DQTAKFWD 126 6777779*999****87777777887636.*******9 PP == domain 2 score: 21.7 bits; conditional E-value: 3.9e-06 TEEEEEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 g++++t++GH +s s+af++ ++ ++ +G++Dg+++iWd sp|Q3TLR7|DTL_MOUSE 130 GELMGTCKGHqCSLKSVAFPKFQKAVFsTGGRDGNIMIWD 169 57899*****999****99999998754899********9 PP == domain 3 score: 14.1 bits; conditional E-value: 0.00097 SEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriWd 38 svt + f+++++++++G Dg +++Wd sp|Q3TLR7|DTL_MOUSE 218 SVTVVLFQDENTLVSAGAVDGIIKVWD 244 5777889999999999999*******9 PP == domain 4 score: 16.4 bits; conditional E-value: 0.00018 EEEEEESS.SS...E.EEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ss...v.tslafspdgawlasGsdDgtvriWd 38 ++ ++ GH +s v +sl spd ++l+sGs D +iW+ sp|Q3TLR7|DTL_MOUSE 307 PVAVFNGHqNStfyVkSSL--SPDDQFLISGSSDEAAYIWK 345 7899****97789999999..**********98**999995 PP == domain 5 score: 24.2 bits; conditional E-value: 6e-07 EEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgaw.lasGsdDgtvriW 37 ++l GH + vts++++p+ +a++sdD+t++iW sp|Q3TLR7|DTL_MOUSE 354 TVLLGHsQEVTSVCWCPSDFTkIATCSDDNTLKIW 388 5677**666****99999888889*********** PP >> sp|Q8N7N5|DCAF8_MOUSE DDB1- and CUL4-associated factor 8 OS=Mus musculus OX=10090 GN=Dcaf8 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 28.9 0.5 2e-08 1.7e-06 2 38 .] 178 215 .. 177 215 .. 0.93 2 ? 5.5 0.0 0.51 44 4 36 .. 222 258 .. 219 258 .. 0.73 3 ? 5.5 0.0 0.52 45 16 38 .] 340 354 .. 327 354 .. 0.81 4 ? 8.1 0.0 0.074 6.4 10 38 .] 374 409 .. 366 409 .. 0.75 5 ! 15.0 0.0 0.00049 0.042 3 37 .. 418 456 .. 416 457 .. 0.88 6 ! 15.0 0.0 0.00049 0.042 8 37 .. 468 499 .. 461 499 .. 0.82 Alignments for each domain: == domain 1 score: 28.9 bits; conditional E-value: 2e-08 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++++ l+GH ++v+ l f++ g+wlasGsdD +v +Wd sp|Q8N7N5|DCAF8_MOUSE 178 RLQHGLEGHtGCVNTLHFNQRGTWLASGSDDLKVVVWD 215 57899****777*************************9 PP == domain 2 score: 5.5 bits; conditional E-value: 0.51 EEEE.ESS.SSEEEEE...EETTSSEEEEEETTSEEEE CS WD40 4 lrtl.tGH.ssvtsla...fspdgawlasGsdDgtvri 36 + + +GH s+v + +s d+++ + + +Dg vr+ sp|Q8N7N5|DCAF8_MOUSE 222 VLDFeSGHkSNVFQAKflpNSGDSTLAM-CARDGQVRV 258 5555259*66697666888999999988.566****97 PP == domain 3 score: 5.5 bits; conditional E-value: 0.52 EEEETTSSEEEEEETTSEEEEEE CS WD40 16 lafspdgawlasGsdDgtvriWd 38 + +a G++D+ vri+d sp|Q8N7N5|DCAF8_MOUSE 340 Q--------FAVGGRDQYVRIYD 354 2........678**********8 PP == domain 4 score: 8.1 bits; conditional E-value: 0.074 S..SS.....EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 H..ss.....vtslafspdgawlasGsdDgtvriWd 38 H +s +t+l +s+dg+ l+++ D +++++ sp|Q8N7N5|DCAF8_MOUSE 374 HlvNSeskanITCLVYSHDGTELLASYNDEDIYLFN 409 3433344567*************9998898888876 PP == domain 5 score: 15.0 bits; conditional E-value: 0.00049 EEEEEESS.SS..EEEEE.EETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGH.ss..vtsla.fspdgawlasGsdDgtvriW 37 ++ ++GH ++ v ++ + p + +++sGsd g++ +W sp|Q8N7N5|DCAF8_MOUSE 418 YIKRYKGHrNNatVKGVNfYGPKSEFVVSGSDCGHIFLW 456 67889***966799***999999999************* PP == domain 6 score: 15.0 bits; conditional E-value: 0.00049 ESSSS..EEEEEEETTSSEEEEEETTSEEEEE CS WD40 8 tGHss..vtslafspdgawlasGsdDgtvriW 37 +G ++ v++l +p+ + la+++ D+ v+iW sp|Q8N7N5|DCAF8_MOUSE 468 EGDKGgvVNCLEPHPHLPVLATSGLDHDVKIW 499 55533467*************9999******* PP >> sp|Q9R099|TBL2_MOUSE Transducin beta-like protein 2 OS=Mus musculus OX=10090 GN=Tbl2 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 34.8 0.2 2.9e-10 2.4e-08 7 38 .] 82 114 .. 70 114 .. 0.89 2 ? 10.4 0.0 0.014 1.2 19 38 .] 193 212 .. 178 212 .. 0.79 3 ! 26.3 0.1 1.4e-07 1.2e-05 6 38 .] 270 303 .. 264 303 .. 0.92 4 ! 11.9 0.0 0.0049 0.42 10 37 .. 367 394 .. 361 395 .. 0.86 Alignments for each domain: == domain 1 score: 34.8 bits; conditional E-value: 2.9e-10 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 l+ H +++++++fs++g++la++ dD+tvriW+ sp|Q9R099|TBL2_MOUSE 82 LKSHsGNISCMDFSSNGKYLATCADDRTVRIWS 114 6789555*************************5 PP == domain 2 score: 10.4 bits; conditional E-value: 0.014 ETTSSEEEEEETTSEEEEEE CS WD40 19 spdgawlasGsdDgtvriWd 38 + g++++++s D tv iW+ sp|Q9R099|TBL2_MOUSE 193 ADTGKFIMTASSDTTVLIWN 212 678999999877*******8 PP == domain 3 score: 26.3 bits; conditional E-value: 1.4e-07 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +l+GH sv+s+afs d++ +as s+Dgt ++Wd sp|Q9R099|TBL2_MOUSE 270 ELKGHsASVHSFAFSNDSRRMASVSKDGTWKLWD 303 589**777**************99*********9 PP == domain 4 score: 11.9 bits; conditional E-value: 0.0049 S.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvriW 37 H ++ +l f+ g++las++ D+ vr++ sp|Q9R099|TBL2_MOUSE 367 HgECIADLTFDITGRFLASCG-DRAVRLF 394 644588899************.*****96 PP >> sp|Q8CFD5|ERCC8_MOUSE DNA excision repair protein ERCC-8 OS=Mus musculus OX=10090 GN=Ercc8 PE=2 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 7.6 0.0 0.11 9.3 10 38 .] 42 72 .. 38 72 .. 0.83 2 ! 13.4 0.6 0.0016 0.14 8 38 .] 96 128 .. 83 128 .. 0.71 3 ! 30.4 0.3 6.7e-09 5.7e-07 1 38 [] 176 215 .. 176 215 .. 0.92 4 ! 16.0 0.0 0.00024 0.021 8 38 .] 242 273 .. 222 273 .. 0.88 5 ! 17.7 0.0 7.3e-05 0.0062 3 37 .. 326 361 .. 324 362 .. 0.89 Alignments for each domain: == domain 1 score: 7.6 bits; conditional E-value: 0.11 S.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 10 H.ssvtsla.fspdgawlasGsdDgtvriWd 38 H s+v+ l+ + +g++++sG+ Dg v ++d sp|Q8CFD5|ERCC8_MOUSE 42 HgSGVNTLDiEPVEGRYMLSGGSDGVVVLYD 72 76668888777778999999988*****998 PP == domain 2 score: 13.4 bits; conditional E-value: 0.0016 ESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawla.sGsdDgtvriWd 38 + H sv +++ p+ + ++ s+s D+t+++Wd sp|Q8CFD5|ERCC8_MOUSE 96 DVHkYSVETVQWYPHDTGMFtSSSFDKTLKVWD 128 4563338888766666665516678*******9 PP == domain 3 score: 30.4 bits; conditional E-value: 6.7e-09 TEEEEEEESS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawl.asGsdDgtvriWd 38 g+c ++l GH + + ++++sp ++++ a++s D v++Wd sp|Q8CFD5|ERCC8_MOUSE 176 GSCSHILQGHrQEILAVSWSPRHDYIlATASADSRVKLWD 215 68********999************6268899*******9 PP == domain 4 score: 16.0 bits; conditional E-value: 0.00024 ESSSS.EEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 8 tGHss.vtslafspdgawla.sGsdDgtvriWd 38 t+H++ v++l+f +dg l+ G+ D+ r+W+ sp|Q8CFD5|ERCC8_MOUSE 242 TAHNGkVNGLCFTSDGLHLLtIGT-DNRMRLWN 273 689556************973589.*******8 PP == domain 5 score: 17.7 bits; conditional E-value: 7.3e-05 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 l l+GH +sv ++ f+p+ + l sGs+D+++ W sp|Q8CFD5|ERCC8_MOUSE 326 RLAMLKGHyKSVDCCVFQPNFQELYSGSRDCNILAW 361 57789*******7777****************9877 PP >> sp|E9Q5M6|CFA44_MOUSE Cilia- and flagella-associated protein 44 OS=Mus musculus OX=10090 GN=Cfap44 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.0 0.0 3.2 2.7e+02 16 37 .. 222 245 .. 218 245 .. 0.84 2 ? 5.8 0.0 0.41 35 11 37 .. 261 287 .. 250 288 .. 0.81 3 ! 14.2 0.1 0.0009 0.077 9 38 .] 353 381 .. 346 381 .. 0.78 4 ? 9.4 0.0 0.029 2.5 7 38 .] 454 486 .. 449 486 .. 0.85 5 ! 20.5 0.0 9e-06 0.00077 5 38 .] 557 591 .. 554 591 .. 0.89 6 ? 5.2 0.0 0.62 53 11 37 .. 793 819 .. 784 820 .. 0.85 7 ! 12.0 0.3 0.0044 0.38 5 38 .] 835 872 .. 831 872 .. 0.86 Alignments for each domain: == domain 1 score: 3.0 bits; conditional E-value: 3.2 EEEETTSSEEEE.EET.TSEEEEE CS WD40 16 lafspdgawlas.Gsd.DgtvriW 37 ++f+ +g++las G+ D t+ iW sp|E9Q5M6|CFA44_MOUSE 222 VDFNNEGNLLASvGCHpDYTITIW 245 689*******9644446******* PP == domain 2 score: 5.8 bits; conditional E-value: 0.41 SSEEEEEEETTSSE.EEEEETTSEEEEE CS WD40 11 ssvtslafspdgaw.lasGsdDgtvriW 37 ++v + f+pd++ l++++ g++++W sp|E9Q5M6|CFA44_MOUSE 261 QDVFKVTFNPDNDEqLTTSG-SGHIKFW 287 45888999******888989.******* PP == domain 3 score: 14.2 bits; conditional E-value: 0.0009 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 H +s++ + ++g +++Gs Dg+vriWd sp|E9Q5M6|CFA44_MOUSE 353 CHsGSINQI-MLDEGEVITAGS-DGSVRIWD 381 675558766.666777799999.*******9 PP == domain 4 score: 9.4 bits; conditional E-value: 0.029 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++ H +++ +la+sp ++a+ +D++vr++d sp|E9Q5M6|CFA44_MOUSE 454 FSFHsGPIAALAVSPLTYLMATTAMDCSVRVYD 486 4579667*************98888******98 PP == domain 5 score: 20.5 bits; conditional E-value: 9e-06 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++++ H + vt+la+ +dg+ la+Gs+D+tv ++d sp|E9Q5M6|CFA44_MOUSE 557 YVFKPHtDEVTALAYERDGDILATGSEDKTVFFFD 591 57899*666**********************9987 PP == domain 6 score: 5.2 bits; conditional E-value: 0.62 SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriW 37 ++++ + fs d++++++G+ +g +r++ sp|E9Q5M6|CFA44_MOUSE 793 NPIRNITFSNDQTMMFCGMTNGAIRVY 819 67999*************88*****97 PP == domain 7 score: 12.0 bits; conditional E-value: 0.0044 EEEESS.SS...EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ss...vtslafspdgawlasGsdDgtvriWd 38 +++ H ++ + s+ s d ++l+++++Dg++ ++d sp|E9Q5M6|CFA44_MOUSE 835 WHFNVHdNNygsIKSITSSFDDQYLLTAGEDGNIFVFD 872 688889744688**********************9998 PP >> sp|Q91VU6|DCA11_MOUSE DDB1- and CUL4-associated factor 11 OS=Mus musculus OX=10090 GN=Dcaf11 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.5 0.0 0.013 1.1 17 38 .] 177 200 .. 153 200 .. 0.83 2 ? 3.6 0.2 2 1.7e+02 12 31 .. 220 239 .. 205 246 .. 0.72 3 ? 5.7 0.0 0.44 38 13 38 .] 268 293 .. 251 293 .. 0.88 4 ! 16.9 0.0 0.00013 0.011 4 38 .] 298 336 .. 295 336 .. 0.75 5 ! 20.3 0.0 1e-05 0.00088 2 38 .] 346 383 .. 345 383 .. 0.92 6 ? 4.9 0.1 0.76 65 4 38 .] 428 469 .. 426 469 .. 0.67 7 ! 24.0 0.5 7.4e-07 6.4e-05 3 37 .. 475 510 .. 473 511 .. 0.90 Alignments for each domain: == domain 1 score: 10.5 bits; conditional E-value: 0.013 E..EETTSSEEEEEETTSEEEEEE CS WD40 17 a..fspdgawlasGsdDgtvriWd 38 + +s+dg+ ++s++ D+t+r++d sp|Q91VU6|DCA11_MOUSE 177 CgiYSKDGQIFMSACQDQTIRLYD 200 25599*****************98 PP == domain 2 score: 3.6 bits; conditional E-value: 2 SEEEEEEETTSSEEE.EEETT CS WD40 12 svtslafspdgawla.sGsdD 31 sv ++af pdg+ ++ s s+ sp|Q91VU6|DCA11_MOUSE 220 SVLDVAFTPDGNHFLyS-SWS 239 3889********97535.443 PP == domain 3 score: 5.7 bits; conditional E-value: 0.44 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 v s+a+s+dg+ ++ G Dg ++++d sp|Q91VU6|DCA11_MOUSE 268 VFSIAVSSDGREVLGGANDGCLYVFD 293 8899**********7778*****998 PP == domain 4 score: 16.9 bits; conditional E-value: 0.00013 EEEEE..SS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 4 lrtlt..GH.ssvtslafspdgaw.lasGsdDgtvriWd 38 rtl H ++v+++af + ++ l+sG+dD +++Wd sp|Q91VU6|DCA11_MOUSE 298 RRTLQieSHeDDVNAVAFADISSQiLFSGGDDAICKVWD 336 55653339*888****96666666356***********9 PP == domain 5 score: 20.3 bits; conditional E-value: 1e-05 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++++ l GH +++t ++ d ++l+s s+D+t+++Wd sp|Q91VU6|DCA11_MOUSE 346 KPVGALAGHqDGITFIDSKGDARYLISNSKDQTIKLWD 383 5788899**777**************88*********9 PP == domain 6 score: 4.9 bits; conditional E-value: 0.76 EEEEESSSSE.EEEE.......EETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGHssv.tsla.......fspdgawlasGsdDgtvriWd 38 l t++GH +v + l s ++++ sG+ g+v ++d sp|Q91VU6|DCA11_MOUSE 428 LMTYRGH-GVlHTLIrcrfspaHSTGQQFIYSGCSTGKVVVYD 469 789****.75444445554465666666699997699998887 PP == domain 7 score: 24.0 bits; conditional E-value: 7.4e-07 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +++lt H +v++++++p ++s+s+Dg++r+W sp|Q91VU6|DCA11_MOUSE 475 IVKKLTNHkACVRDVSWHPFEEKIVSSSWDGNLRLW 510 578899**666************************* PP >> sp|Q6PAC3|DCA13_MOUSE DDB1- and CUL4-associated factor 13 OS=Mus musculus OX=10090 GN=Dcaf13 PE=2 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 21.2 0.1 5.5e-06 0.00047 4 38 .] 59 95 .. 57 95 .. 0.81 2 ! 18.0 0.1 5.5e-05 0.0047 1 38 [] 99 137 .. 99 137 .. 0.91 3 ? 9.7 0.0 0.023 2 11 38 .] 197 225 .. 183 225 .. 0.82 4 ! 14.6 0.0 0.00065 0.056 9 37 .. 280 309 .. 273 309 .. 0.88 5 ! 19.3 0.0 2.2e-05 0.0019 10 38 .] 327 353 .. 317 353 .. 0.87 Alignments for each domain: == domain 1 score: 21.2 bits; conditional E-value: 5.5e-06 EEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtsla.fspdgawlasGsdDgtvriWd 38 l +l+GH ++v++la +++ a ++sG Dg v+iW+ sp|Q6PAC3|DCA13_MOUSE 59 LASLDGHrDGVNCLAkHPKSLASVLSGACDGEVKIWN 95 6789***999****955555555889966*******8 PP == domain 2 score: 18.0 bits; conditional E-value: 5.5e-05 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++c+rt+ +H ++v+++++ g+ +++ +dD+tv+ W+ sp|Q6PAC3|DCA13_MOUSE 99 RKCIRTIQAHeGFVRGMCTRFCGTSFFTVGDDKTVKQWK 137 58********888*****9999999988888*******6 PP == domain 3 score: 9.7 bits; conditional E-value: 0.023 SSEEEEEEETTSSEEE.EE.ETTSEEEEEE CS WD40 11 ssvtslafspdgawla.sG.sdDgtvriWd 38 +s++s++f+p ++l+ s+ s D+++ ++d sp|Q6PAC3|DCA13_MOUSE 197 DSISSVKFNPVETFLLgSCaS-DRNIVLYD 225 459************965535.*****998 PP == domain 4 score: 14.6 bits; conditional E-value: 0.00065 SS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriW 37 H s v ++++sp g+ ++s+s D+++ri+ sp|Q6PAC3|DCA13_MOUSE 280 DHvSAVLDVDYSPTGKEFVSASFDKSIRIF 309 4877799**************99*****96 PP == domain 5 score: 19.3 bits; conditional E-value: 2.2e-05 SSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 HssvtslafspdgawlasGsdDgtvriWd 38 H v ++++ +d++++++Gsd ++r+W+ sp|Q6PAC3|DCA13_MOUSE 327 H--VMCVKWTSDSKYIMCGSDEMNIRLWK 353 5..*************************6 PP >> sp|Q80ZK9|WDTC1_MOUSE WD and tetratricopeptide repeats protein 1 OS=Mus musculus OX=10090 GN=Wdtc1 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 28.3 0.1 3.1e-08 2.6e-06 6 38 .] 42 75 .. 39 75 .. 0.92 2 ? 7.1 0.1 0.16 14 4 38 .] 83 120 .. 80 120 .. 0.74 3 ! 16.6 0.1 0.00016 0.014 6 37 .. 529 565 .. 524 566 .. 0.87 4 ! 22.2 0.0 2.7e-06 0.00023 2 38 .] 571 608 .. 570 608 .. 0.91 Alignments for each domain: == domain 1 score: 28.3 bits; conditional E-value: 3.1e-08 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +l GH ++v++l ++ g++lasGsdD++ +Wd sp|Q80ZK9|WDTC1_MOUSE 42 ELQGHsGCVNCLEWNEKGDLLASGSDDQHTIVWD 75 689**666*************************9 PP == domain 2 score: 7.1 bits; conditional E-value: 0.16 EEEEESS.SSEEEEE..EETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtsla..fspdgawlasGsdDgtvriWd 38 l tGH ++ s++ + + l++G D +v++ d sp|Q80ZK9|WDTC1_MOUSE 83 LSMHTGHtANIFSVKflPHAGDRILITGAADSKVHVHD 120 45567**777****8765556666889*99***99865 PP == domain 3 score: 16.6 bits; conditional E-value: 0.00016 EEESS.SSEEEEE....EETTSSEEEEEETTSEEEEE CS WD40 6 tltGH.ssvtsla....fspdgawlasGsdDgtvriW 37 + GH + t+++ f ++ ++++sGsdDg+ iW sp|Q80ZK9|WDTC1_MOUSE 529 RYCGHcNTTTDIKeanfFGSNAQYIVSGSDDGSFFIW 565 57799777899999999******************** PP == domain 4 score: 22.2 bits; conditional E-value: 2.7e-06 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++r+l G s v++l+ +p+ +la+++ D+ vr+W+ sp|Q80ZK9|WDTC1_MOUSE 571 NLVRVLQGDeSIVNCLQPHPSYCFLATSGIDPVVRLWN 608 5789999995558************************8 PP >> sp|Q9WVA3|BUB3_MOUSE Mitotic checkpoint protein BUB3 OS=Mus musculus OX=10090 GN=Bub3 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 14.8 0.0 0.00059 0.051 12 38 .] 16 43 .. 4 43 .. 0.85 2 ? 7.1 0.1 0.16 14 10 37 .. 55 82 .. 48 83 .. 0.82 3 ! 24.7 0.0 4.4e-07 3.8e-05 9 38 .] 94 124 .. 88 124 .. 0.91 4 ? 3.1 0.0 2.9 2.5e+02 13 38 .] 140 163 .. 130 163 .. 0.78 5 ! 16.3 0.0 0.0002 0.017 8 38 .] 222 262 .. 215 262 .. 0.78 6 ? 7.0 0.0 0.17 14 10 29 .. 273 295 .. 265 305 .. 0.71 Alignments for each domain: == domain 1 score: 14.8 bits; conditional E-value: 0.00059 SEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 12 svtslafspdgaw.lasGsdDgtvriWd 38 +++s++fsp+ + l+ +s+D +vr++d sp|Q9WVA3|BUB3_MOUSE 16 GISSVKFSPNTSQfLLVSSWDTSVRLYD 43 499**********54589********98 PP == domain 2 score: 7.1 bits; conditional E-value: 0.16 S.SSEEEEE.EETTSSEEEEEETTSEEEEE CS WD40 10 H.ssvtsla.fspdgawlasGsdDgtvriW 37 H + v ++a ++p +aw sG+ D+ +++ sp|Q9WVA3|BUB3_MOUSE 55 HtGAVLDCAfYDPTHAW--SGGLDHQLKMH 82 7555988888*******..8**9***9985 PP == domain 3 score: 24.7 bits; conditional E-value: 4.4e-07 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 +H +++++ ++p+ + +++Gs+D+tv++Wd sp|Q9WVA3|BUB3_MOUSE 94 THdAPIRCVEYCPEVNVMVTGSWDQTVKLWD 124 68777*************************9 PP == domain 4 score: 3.1 bits; conditional E-value: 2.9 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 v+ l s +g+ l+ G+ + v +Wd sp|Q9WVA3|BUB3_MOUSE 140 VYTL--SVSGDRLIVGTAGRRVLVWD 163 5555..668888888*99*******9 PP == domain 5 score: 16.3 bits; conditional E-value: 0.0002 ESS..SS........EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH..ss........vtslafspdgawlasGsdDgtvriWd 38 + H + v++++f+ ++ +a+G+ Dg v iWd sp|Q9WVA3|BUB3_MOUSE 222 KCHrlKEnnieqiypVNAISFHNIHNTFATGGSDGFVNIWD 262 5555433445666669***************88*******9 PP == domain 6 score: 7.0 bits; conditional E-value: 0.17 S...SSEEEEEEETTSSEEEEEE CS WD40 10 H...ssvtslafspdgawlasGs 29 H +s+ slafs dg+ la +s sp|Q9WVA3|BUB3_MOUSE 273 HrypTSIASLAFSNDGTTLAIAS 295 55445699**********98443 PP >> sp|Q9DCE5|PK1IP_MOUSE p21-activated protein kinase-interacting protein 1 OS=Mus musculus OX=10090 GN=Pak1ip1 PE=1 SV # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 12.3 0.4 0.0035 0.3 3 38 .] 32 68 .. 30 68 .. 0.75 2 ! 26.5 0.7 1.1e-07 9.8e-06 9 38 .] 80 109 .. 73 109 .. 0.87 3 ! 26.7 0.3 9.9e-08 8.5e-06 1 38 [] 113 151 .. 113 151 .. 0.90 4 ? 4.0 0.0 1.5 1.3e+02 12 38 .] 204 231 .. 192 231 .. 0.76 5 ! 13.5 0.0 0.0015 0.13 2 37 .. 236 274 .. 235 275 .. 0.82 Alignments for each domain: == domain 1 score: 12.3 bits; conditional E-value: 0.0035 EEEEEESSSSEEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGHssvtsla.fspdgawlasGsdDgtvriWd 38 ++ +t Hs+ sl+ +++++++sGs+D t++i+d sp|Q9DCE5|PK1IP_MOUSE 32 PVADFTHHSHTASLSvLASNSRYVVSGSKDETIHIYD 68 566677675533444467899**************98 PP == domain 2 score: 26.5 bits; conditional E-value: 1.1e-07 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 H + vt+l+f+ +++++ sG +Dg++ iWd sp|Q9DCE5|PK1IP_MOUSE 80 HHaGTVTCLKFHGNQHLI-SGAEDGHICIWD 109 57666************7.7**********9 PP == domain 3 score: 26.7 bits; conditional E-value: 9.9e-08 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++cl+t+++H ++vt l+ +p+g++ +s + D+t+r W+ sp|Q9DCE5|PK1IP_MOUSE 113 WKCLKTFKAHrGHVTFLSIHPSGKLALSVGTDKTLRTWN 151 79********999************776555*******8 PP == domain 4 score: 4.0 bits; conditional E-value: 1.5 S..EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 s..vtslafspdgawlasGsdDgtvriWd 38 + ++s+ f +d+ + ++G+ vri+d sp|Q9DCE5|PK1IP_MOUSE 204 GkrISSVTFLSDSVLAVAGD-EEVVRIFD 231 34599**9999999988777.99999998 PP == domain 5 score: 13.5 bits; conditional E-value: 0.0015 EEEEEEESS.SSEEEEE..EETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtsla..fspdgawlasGsdDgtvriW 37 +cl ++++H + v ++ pd++ l+++s Dg +++W sp|Q9DCE5|PK1IP_MOUSE 236 ECLCEFRAHeNRVKDMVsfEVPDHHVLVTASNDGFIKMW 274 7999*****98887776666666677889999******* PP >> sp|Q8BUB4|WDFY2_MOUSE WD repeat and FYVE domain-containing protein 2 OS=Mus musculus OX=10090 GN=Wdfy2 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 6.5 0.0 0.24 21 25 37 .. 39 51 .. 22 51 .. 0.86 2 ? 2.3 0.0 5 4.3e+02 12 34 .. 70 92 .. 63 93 .. 0.84 3 ? 2.7 0.0 4 3.4e+02 3 32 .. 106 136 .. 104 138 .. 0.68 4 ! 30.5 1.1 6.2e-09 5.3e-07 3 38 .] 191 227 .. 189 227 .. 0.93 5 ! 15.5 0.0 0.00036 0.031 6 38 .] 237 270 .. 233 270 .. 0.86 6 ! 17.6 0.7 7.4e-05 0.0063 10 38 .] 363 394 .. 356 394 .. 0.79 Alignments for each domain: == domain 1 score: 6.5 bits; conditional E-value: 0.24 EEEEETTSEEEEE CS WD40 25 lasGsdDgtvriW 37 ++s s+D+tvr+W sp|Q8BUB4|WDFY2_MOUSE 39 VISVSEDRTVRVW 51 456799******* PP == domain 2 score: 2.3 bits; conditional E-value: 5 SEEEEEEETTSSEEEEEETTSEE CS WD40 12 svtslafspdgawlasGsdDgtv 34 + ++++f+p+ + l+ G d+gt+ sp|Q8BUB4|WDFY2_MOUSE 70 PCSCMSFNPETRRLSIGLDNGTI 92 468***********99*889998 PP == domain 3 score: 2.7 bits; conditional E-value: 4 EEEEEESS.SS......EEEEEEETTSSEEEEEETTS CS WD40 3 clrtltGH.ss......vtslafspdgawlasGsdDg 32 +++ + +H s v l w++s + D+ sp|Q8BUB4|WDFY2_MOUSE 106 PVKNYQAHqSRvtmvlfVLEL------EWVLSTGQDK 136 789999**6664444444455......9999888787 PP == domain 4 score: 30.5 bits; conditional E-value: 6.2e-09 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +l++++GH ++vt+l+++p ++ l+sGs D++v +Wd sp|Q8BUB4|WDFY2_MOUSE 191 LLTSFRGHtGGVTALCWDPVQRVLFSGSSDHSVIMWD 227 6899****888****************99*******9 PP == domain 5 score: 15.5 bits; conditional E-value: 0.00036 EEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGHss.vtslafspdgawlasGsdDgtvriWd 38 +l GH++ v +l++ ++ + l+s++ Dg + +W+ sp|Q8BUB4|WDFY2_MOUSE 237 ELQGHNDkVQALSYAQHTRQLISCGGDGGIVVWN 270 589**667****99999999987766*******8 PP == domain 6 score: 17.6 bits; conditional E-value: 7.4e-05 S..SS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 H..ss.vtslafspdgawlasGsdDgtvriWd 38 H ++ + ++ f+ wl++++ D+ +++Wd sp|Q8BUB4|WDFY2_MOUSE 363 HdsKHnIVHVHFDATRGWLLTSGTDKVIKLWD 394 53233688**********998777*******9 PP >> sp|Q9CX97|WDR55_MOUSE WD repeat-containing protein 55 OS=Mus musculus OX=10090 GN=Wdr55 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.3 0.0 0.032 2.8 15 36 .. 44 65 .. 39 66 .. 0.91 2 ! 11.0 0.1 0.0093 0.8 8 36 .. 81 111 .. 75 113 .. 0.87 3 ? 9.6 0.0 0.026 2.3 8 38 .] 125 155 .. 117 155 .. 0.80 4 ? 5.1 0.0 0.66 57 6 37 .. 164 196 .. 159 197 .. 0.79 5 ? 7.1 0.0 0.16 13 12 38 .] 213 239 .. 204 241 .. 0.87 6 ? 3.6 0.0 2 1.7e+02 21 35 .. 264 278 .. 252 279 .. 0.81 7 ! 20.2 0.1 1.1e-05 0.00097 4 38 .] 288 324 .. 285 324 .. 0.84 Alignments for each domain: == domain 1 score: 9.3 bits; conditional E-value: 0.032 EEEEETTSSEEEEEETTSEEEE CS WD40 15 slafspdgawlasGsdDgtvri 36 +laf+p ++la+G+ Dg v + sp|Q9CX97|WDR55_MOUSE 44 GLAFHPTRDLLAAGDVDGDVFV 65 799***********99**9977 PP == domain 2 score: 11.0 bits; conditional E-value: 0.0093 ESS..SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 8 tGH..ssvtslafspdgawlasGsdDgtvri 36 +GH +s +++ fs dg+ l++ s+D+ ++i sp|Q9CX97|WDR55_MOUSE 81 SGHhlKSCRAVVFSEDGQKLVTVSKDKAIHI 111 578788899999****************998 PP == domain 3 score: 9.6 bits; conditional E-value: 0.026 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++H +++s+ +++a+ ++G+d g +r+Wd sp|Q9CX97|WDR55_MOUSE 125 KAHsAPINSVLLVDENAL-VTGDDTGGIRLWD 155 69*777****77777777.58**********9 PP == domain 4 score: 5.1 bits; conditional E-value: 0.66 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriW 37 + H + ++a +p +++l+++s Dg + ++ sp|Q9CX97|WDR55_MOUSE 164 DMRQHeEYIADMALDPAKKLLLTASGDGCLGVF 196 56789666999**********99877*988665 PP == domain 5 score: 7.1 bits; conditional E-value: 0.16 SEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriWd 38 + ts+a ++g+ +a+Gs gt+++++ sp|Q9CX97|WDR55_MOUSE 213 DLTSVALMKYGKKVACGSSEGTIYLFN 239 489999999********99*****976 PP == domain 6 score: 3.6 bits; conditional E-value: 2 TSSEEEEEETTSEEE CS WD40 21 dgawlasGsdDgtvr 35 ++l++Gs Dg +r sp|Q9CX97|WDR55_MOUSE 264 TENLLCTGSTDGIIR 278 557799*******98 PP == domain 7 score: 20.2 bits; conditional E-value: 1.1e-05 EEEEESS..SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH..ssvtslafspdgawlasGsdDgtvriWd 38 ++t H +v +la s+ g++las++ D+ +++Wd sp|Q9CX97|WDR55_MOUSE 288 VGTVGQHagEPVEALALSHCGHFLASSGHDQRLKFWD 324 56777897445**************8777*******9 PP >> tr|A0A0N4SUK7|A0A0N4SUK7_MOUSE WD repeat domain 49 OS=Mus musculus OX=10090 GN=Wdr49 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 4.5 0.0 1.1 91 12 38 .] 29 55 .. 17 55 .. 0.84 2 ! 12.0 0.0 0.0043 0.37 2 38 .] 61 98 .. 60 98 .. 0.89 3 ! 20.1 0.0 1.2e-05 0.001 5 38 .] 192 228 .. 188 228 .. 0.81 4 ! 18.7 0.1 3.5e-05 0.003 10 38 .] 290 318 .. 283 318 .. 0.89 5 ? 6.1 0.0 0.33 28 22 38 .] 396 412 .. 368 412 .. 0.79 6 ? 10.8 0.0 0.011 0.91 6 38 .] 421 455 .. 416 455 .. 0.75 Alignments for each domain: == domain 1 score: 4.5 bits; conditional E-value: 1.1 SEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriWd 38 +++++++++ +++a+++ +++v +W+ tr|A0A0N4SUK7|A0A0N4SUK7_MOUSE 29 GIHAFDYHSRLNLIATAGINNKVCLWN 55 5889989999999*************8 PP == domain 2 score: 12.0 bits; conditional E-value: 0.0043 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++++l GH sv +++f + + l+s s+D+ +r+Wd tr|A0A0N4SUK7|A0A0N4SUK7_MOUSE 61 KPVGVLWGHsASVIAVQFFAERKQLFSFSRDKVLRLWD 98 6788999**77788***9999999**879********9 PP == domain 3 score: 20.1 bits; conditional E-value: 1.2e-05 EEEE.SS.SS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtlt.GH.ss.vtslafspdgawlasGsdDgtvriWd 38 + + H + ++ +a + +++ l++Gs Dgtv++Wd tr|A0A0N4SUK7|A0A0N4SUK7_MOUSE 192 KQFAgCHgNAeISTMALDANKTRLLTGSTDGTVKVWD 228 55532676457*************************9 PP == domain 4 score: 18.7 bits; conditional E-value: 3.5e-05 S.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvriWd 38 H +++ + afsp ++++ +Gs+Dg + +W+ tr|A0A0N4SUK7|A0A0N4SUK7_MOUSE 290 HqDDILCAAFSPPQTLV-TGSYDGEIVLWN 318 6677************7.7**********8 PP == domain 5 score: 6.1 bits; conditional E-value: 0.33 SSEEEEEETTSEEEEEE CS WD40 22 gawlasGsdDgtvriWd 38 ga l+s++ g vr+Wd tr|A0A0N4SUK7|A0A0N4SUK7_MOUSE 396 GANLVSCGASGYVRFWD 412 555778888*******9 PP == domain 6 score: 10.8 bits; conditional E-value: 0.011 EEESSSSEEEEE..EETTSSEEEEEETTSEEEEEE CS WD40 6 tltGHssvtsla..fspdgawlasGsdDgtvriWd 38 ++ +H +v s+ +++ +++la+G+ Dg ++iW+ tr|A0A0N4SUK7|A0A0N4SUK7_MOUSE 421 EFLAHAGVGSIImsTDKLNQYLATGDSDGWLKIWN 455 566776666666556777888****66*******8 PP >> sp|Q9D1M0|SEC13_MOUSE Protein SEC13 homolog OS=Mus musculus OX=10090 GN=Sec13 PE=1 SV=3 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 13.1 0.0 0.002 0.17 9 38 .] 11 41 .. 5 41 .. 0.85 2 ! 20.6 0.1 8.3e-06 0.00071 5 38 .] 51 87 .. 47 87 .. 0.84 3 ! 18.1 1.2 5.1e-05 0.0044 2 35 .. 94 130 .. 93 131 .. 0.80 4 ? 7.0 0.0 0.17 15 24 37 .. 175 194 .. 140 195 .. 0.73 5 ! 17.2 0.2 0.0001 0.0086 3 37 .. 204 243 .. 202 244 .. 0.81 6 ! 12.5 0.7 0.0032 0.27 10 38 .] 259 290 .. 255 290 .. 0.83 Alignments for each domain: == domain 1 score: 13.1 bits; conditional E-value: 0.002 SSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GHss.vtslafspdgawlasGsdDgtvriWd 38 H + +++ + + +g+ la++s D++v+i+d sp|Q9D1M0|SEC13_MOUSE 11 SHEDmIHDAQMDYYGTRLATCSSDRSVKIFD 41 67556999999999*******88******98 PP == domain 2 score: 20.6 bits; conditional E-value: 8.3e-06 EEEESS.SSEEEEE..EETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtsla..fspdgawlasGsdDgtvriWd 38 l+GH ++v+ +a + +g+ las+s+D++v iW+ sp|Q9D1M0|SEC13_MOUSE 51 ADLRGHeGPVWQVAwaHPMYGNILASCSYDRKVIIWK 87 5699**999****7667777777*************6 PP == domain 3 score: 18.1 bits; conditional E-value: 5.1e-05 EEEEEEESS.SSEEEEE..EETTSSEEEEEETTSEEE CS WD40 2 qclrtltGH.ssvtsla..fspdgawlasGsdDgtvr 35 +++++ +GH ssv+s++ +++g la+Gs Dg + sp|Q9D1M0|SEC13_MOUSE 94 EKTHEHSGHdSSVNSVCwaPHDYGLILACGSSDGAIS 130 6789999**999****9666666666899988**986 PP == domain 4 score: 7.0 bits; conditional E-value: 0.17 E......EEEEETTSEEEEE CS WD40 24 w......lasGsdDgtvriW 37 +asG+ D+ +++W sp|Q9D1M0|SEC13_MOUSE 175 KpnyikkFASGGCDNLIKLW 194 3444445689988******* PP == domain 5 score: 17.2 bits; conditional E-value: 0.0001 EEEEEESS.SSEEEEEEETTSSE..........EEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw..........lasGsdDgtvriW 37 ++l++H ++v+++ aw +as+s Dg v iW sp|Q9D1M0|SEC13_MOUSE 204 EEQKLEAHsDWVRDV------AWapsiglptstIASCSQDGRVFIW 243 567899**666****......66666666999999*********** PP == domain 6 score: 12.5 bits; conditional E-value: 0.0032 S..SS.EEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 10 H..ss.vtslafspdgawla.sGsdDgtvriWd 38 H ++ v+++++s + la sG+ D++v +W+ sp|Q9D1M0|SEC13_MOUSE 259 HkfNDvVWHVSWSITANILAvSGG-DNKVTLWK 290 6444667***********975888.*******6 PP >> sp|E9Q4P1|WDFY1_MOUSE WD repeat and FYVE domain-containing protein 1 OS=Mus musculus OX=10090 GN=Wdfy1 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 14.9 0.0 0.00054 0.046 4 37 .. 17 51 .. 15 51 .. 0.83 2 ! 11.2 0.0 0.0081 0.7 3 34 .. 106 138 .. 104 139 .. 0.84 3 ! 24.6 0.6 4.8e-07 4.1e-05 4 38 .] 192 227 .. 189 227 .. 0.92 4 ! 12.9 0.0 0.0023 0.2 7 38 .] 238 270 .. 230 270 .. 0.84 5 ! 12.3 0.1 0.0035 0.3 13 38 .] 376 394 .. 357 394 .. 0.65 Alignments for each domain: == domain 1 score: 14.9 bits; conditional E-value: 0.00054 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 l +++GH + vt+ p + ++++s+D+t+r+W sp|E9Q4P1|WDFY1_MOUSE 17 LSKIEGHqDAVTAALLIPKEDGVITASEDRTIRVW 51 56679**666*99977777777899********** PP == domain 2 score: 11.2 bits; conditional E-value: 0.0081 EEEEEESS.SSEEEEEEETTSSEEE.EEETTSEE CS WD40 3 clrtltGH.ssvtslafspdgawla.sGsdDgtv 34 ++t+ +H + v+++ fs w++ +G+ D+ v sp|E9Q4P1|WDFY1_MOUSE 106 FIKTYPAHqNRVSAIIFSLAAEWVIsTGH-DKCV 138 6899****988************983566.9987 PP == domain 3 score: 24.6 bits; conditional E-value: 4.8e-07 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++tl+GH +s+ +l ++p +++l+sG D++v +Wd sp|E9Q4P1|WDFY1_MOUSE 192 ITTLKGHeGSIACLWWDPIQRLLFSGASDNSVIMWD 227 789****999****************66*******9 PP == domain 4 score: 12.9 bits; conditional E-value: 0.0023 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 l GH + v sl++ + + l+s+s Dg + +W+ sp|E9Q4P1|WDFY1_MOUSE 238 LQGHhDRVQSLCYLQLTRQLVSCSADGGIAVWN 270 579*777****98888888*************8 PP == domain 5 score: 12.3 bits; conditional E-value: 0.0035 E.EEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 v.tslafspdgawlasGsdDgtvriWd 38 + ++l +++++ D+ v+iWd sp|E9Q4P1|WDFY1_MOUSE 376 IaRGL--------MVTCGTDRVVKIWD 394 44555........778877*******9 PP >> sp|Q5SUS0|FBW10_MOUSE F-box/WD repeat-containing protein 10 OS=Mus musculus OX=10090 GN=Fbxw10 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.6 0.0 0.00016 0.014 6 38 .] 463 496 .. 458 496 .. 0.93 2 ! 22.6 0.1 2.1e-06 0.00018 1 38 [] 500 536 .. 500 536 .. 0.91 3 ? 4.5 0.1 1 87 1 37 [. 540 574 .. 540 575 .. 0.78 4 ! 14.9 0.0 0.00053 0.045 2 37 .. 580 614 .. 579 615 .. 0.83 5 ? 7.1 0.0 0.15 13 3 38 .] 623 656 .. 621 656 .. 0.63 Alignments for each domain: == domain 1 score: 16.6 bits; conditional E-value: 0.00016 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++GH +sv++l s + + l+sGs+D ++r Wd sp|Q5SUS0|FBW10_MOUSE 463 EFRGHaGSVRALFLSEEDNILLSGSYDLSIRYWD 496 69***999*****9*******************9 PP == domain 2 score: 22.6 bits; conditional E-value: 2.1e-06 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 g c+r++ GH + +t+l + +++ l+sG +Dg v+ Wd sp|Q5SUS0|FBW10_MOUSE 500 GACVRIFYGHqGTITCL--DVYKNRLVSGAKDGQVKEWD 536 57********777****..889999************98 PP == domain 3 score: 4.5 bits; conditional E-value: 1 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 g+cl+t++ H +++ + + + ++++s+++ g v++W sp|Q5SUS0|FBW10_MOUSE 540 GKCLKTFK-HkDPILAAKI--SETYIVSSCERGIVKVW 574 699****8.9666866632..6667889999******* PP == domain 4 score: 14.9 bits; conditional E-value: 0.00053 EEEEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw.lasGsdDgtvriW 37 q+++tltGH + v +l + w l+sG+ Dg v+ W sp|Q5SUS0|FBW10_MOUSE 580 QLQKTLTGHeGAVKCL---FFNEWhLVSGGADGLVMAW 614 789******888****...345776689*99****999 PP == domain 5 score: 7.1 bits; conditional E-value: 0.15 EEEEEESS.SSEEEEEEETTSSE.....EEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw.....lasGsdDgtvriWd 38 cl ++ H + v + ++ +++++ Dg++ri++ sp|Q5SUS0|FBW10_MOUSE 623 CLMAFK-HpKEVLQV------SLlylrvISACG-DGKIRIYN 656 666665.66666555......443344356778.******98 PP >> tr|Q3TAQ9|Q3TAQ9_MOUSE WD repeat domain 36 OS=Mus musculus OX=10090 GN=Wdr36 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 8.5 0.3 0.055 4.7 3 37 .. 101 134 .. 99 135 .. 0.85 2 ? 2.8 0.1 3.6 3.1e+02 9 38 .] 232 265 .. 227 265 .. 0.73 3 ? 7.1 0.0 0.15 13 9 37 .. 278 307 .. 270 307 .. 0.84 4 ? 3.9 0.0 1.6 1.3e+02 9 34 .. 324 351 .. 316 354 .. 0.80 5 ? 8.6 0.0 0.054 4.6 8 38 .] 484 515 .. 477 515 .. 0.87 6 ! 34.6 0.2 3.3e-10 2.8e-08 2 38 .] 561 598 .. 560 598 .. 0.93 7 ? 2.9 0.0 3.3 2.9e+02 17 32 .. 618 633 .. 609 634 .. 0.88 Alignments for each domain: == domain 1 score: 8.5 bits; conditional E-value: 0.055 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 ++t++GH ++ l +p g+ ++s + D + iW tr|Q3TAQ9|Q3TAQ9_MOUSE 101 IVHTFKGHkAEIH-L-LQPFGDHVISVDTDSVLIIW 134 69******555*5.5.6*******99988******* PP == domain 2 score: 2.8 bits; conditional E-value: 3.6 SS.SS..EEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 9 GH.ss..vtslafspdgawl.asGsdDgtvriWd 38 H ++ +ts++f dg+ + a+Gs g++ +Wd tr|Q3TAQ9|Q3TAQ9_MOUSE 232 FHqDWgpITSISFRTDGHPImAAGSPCGHIGLWD 265 5753356****98888888625778899999998 PP == domain 3 score: 7.1 bits; conditional E-value: 0.15 SS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriW 37 +H + +++l f + ++l++ + D+ +riW tr|Q3TAQ9|Q3TAQ9_MOUSE 278 AHsTAISGLTFLHREPLLVTNGADNALRIW 307 89666****99999999998666******* PP == domain 4 score: 3.9 bits; conditional E-value: 1.6 SS.SSEEEEE.EETTSSEEEEEETTSEE CS WD40 9 GH.ssvtsla.fspdgawlasGsdDgtv 34 GH s t ++ + ++g+ ++s+s Dgt+ tr|Q3TAQ9|Q3TAQ9_MOUSE 324 GHsASLTKIRyYGQNGQQILSASQDGTL 351 9966688888888899999*******97 PP == domain 5 score: 8.6 bits; conditional E-value: 0.054 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++H +sv+++a++ ++++++++ + +++W+ tr|Q3TAQ9|Q3TAQ9_MOUSE 484 KAHtGSVRGVAVDGLNQLVVTAGSERLLKFWN 515 589888************986644*******8 PP == domain 6 score: 34.6 bits; conditional E-value: 3.3e-10 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + +r+++GH + ++++ fspdg+wl+s+ +D++vr Wd tr|Q3TAQ9|Q3TAQ9_MOUSE 561 KIVREFSGHhGQINDMTFSPDGRWLISAAMDCSVRTWD 598 6799*****877**************9999*******9 PP == domain 7 score: 2.9 bits; conditional E-value: 3.3 EEETTSSEEEEEETTS CS WD40 17 afspdgawlasGsdDg 32 sp g++la+++ D+ tr|Q3TAQ9|Q3TAQ9_MOUSE 618 TMSPTGDFLATSHVDH 633 569*********9997 PP >> sp|Q8K3E5|AHI1_MOUSE Jouberin OS=Mus musculus OX=10090 GN=Ahi1 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 6.7 0.0 0.21 18 14 32 .. 463 483 .. 446 484 .. 0.77 2 ! 28.9 0.1 2e-08 1.7e-06 2 38 .] 495 532 .. 494 532 .. 0.91 3 ! 11.6 0.0 0.0059 0.51 7 38 .] 544 576 .. 537 576 .. 0.82 4 ? 10.4 0.5 0.014 1.2 4 38 .] 587 622 .. 585 629 .. 0.73 5 ! 12.5 0.0 0.003 0.26 19 38 .] 702 721 .. 684 721 .. 0.88 Alignments for each domain: == domain 1 score: 6.7 bits; conditional E-value: 0.21 EEEEEETTSSEEEEE..ETTS CS WD40 14 tslafspdgawlasG..sdDg 32 +l+fs++g+ la++ s+Dg sp|Q8K3E5|AHI1_MOUSE 463 FCLDFSHNGRILAAAcaSRDG 483 69*********9854247898 PP == domain 2 score: 28.9 bits; conditional E-value: 2e-08 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + +r+l GH + +++l++s+d ++l+++s Dgt r+W+ sp|Q8K3E5|AHI1_MOUSE 495 RFMRELCGHlNIIYDLDWSKDDRYLVTSSSDGTARVWK 532 5689999**999**************9977*******6 PP == domain 3 score: 11.6 bits; conditional E-value: 0.0059 EESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 l H s+v+ +f+p + l+ +G++D +riW+ sp|Q8K3E5|AHI1_MOUSE 544 L-PHpSFVYTAKFHPATRELVvTGCYDSMIRIWK 576 4.388889999999999997559*9********6 PP == domain 4 score: 10.4 bits; conditional E-value: 0.014 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +r l+ H s+v+s++f+++g+ + sG+ g + +Wd sp|Q8K3E5|AHI1_MOUSE 587 VRQLDVHkSFVNSICFDDEGHHMYSGDCIGVIVVWD 622 678899*777**************995333333333 PP == domain 5 score: 12.5 bits; conditional E-value: 0.003 ETTSSEEEEEETTSEEEEEE CS WD40 19 spdgawlasGsdDgtvriWd 38 p g++l+sGs+Dg v++W+ sp|Q8K3E5|AHI1_MOUSE 702 TPCGTLLFSGSEDGIVYVWN 721 68999**************8 PP >> sp|Q9R1A8|COP1_MOUSE E3 ubiquitin-protein ligase COP1 OS=Mus musculus OX=10090 GN=Cop1 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.7 0.0 1.8 1.6e+02 9 37 .. 422 450 .. 409 451 .. 0.81 2 ! 13.8 0.1 0.0012 0.099 10 38 .] 472 501 .. 463 501 .. 0.80 3 ! 14.7 0.0 0.00062 0.053 2 38 .] 506 544 .. 505 544 .. 0.81 4 ! 12.5 0.1 0.0032 0.27 12 38 .] 559 586 .. 549 586 .. 0.81 5 ! 13.0 0.0 0.0021 0.18 2 38 .] 592 628 .. 591 628 .. 0.79 6 ! 14.3 0.0 0.00084 0.072 3 37 .. 634 669 .. 632 669 .. 0.86 Alignments for each domain: == domain 1 score: 3.7 bits; conditional E-value: 1.8 SSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 9 GHss.vtslafspdgawlasGsdDgtvriW 37 G s v+s+ f++d +++a ++ ++++++ sp|Q9R1A8|COP1_MOUSE 422 GS-SiVSSIEFDRDCDYFAIAGVTKKIKVY 450 44.348***********9977779999887 PP == domain 2 score: 13.8 bits; conditional E-value: 0.0012 SSSEEEEEEETTSSEEEEEET.TSEEEEEE CS WD40 10 HssvtslafspdgawlasGsd.DgtvriWd 38 s ++++++s++++ l+++sd gtv +Wd sp|Q9R1A8|COP1_MOUSE 472 NSKISCISWSSYHKNLLASSDyEGTVILWD 501 4449****99999998777644*******9 PP == domain 3 score: 14.7 bits; conditional E-value: 0.00062 EEEEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtsla.fspdgawlasGsdDgtvriWd 38 q +++ H + +s++ + d ++lasGsdD +v++W+ sp|Q9R1A8|COP1_MOUSE 506 QRSKVYQEHeKRCWSVDfNLMDPKLLASGSDDAKVKLWS 544 566889999888999976556666699***********5 PP == domain 4 score: 12.5 bits; conditional E-value: 0.0032 SEEEEEEETTSSEEEE.EETTSEEEEEE CS WD40 12 svtslafspdgawlas.GsdDgtvriWd 38 +v++++fsp+++++++ G+ D+ v+ +d sp|Q9R1A8|COP1_MOUSE 559 NVCCVKFSPSSRYHLAfGCADHCVHYYD 586 49***********7655778***99876 PP == domain 5 score: 13.0 bits; conditional E-value: 0.0021 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 q++ +++GH + v s a +g ++s+s D +++W+ sp|Q9R1A8|COP1_MOUSE 592 QPIMVFKGHrKAV-SYAKFVSGEEIVSASTDSQLKLWN 628 7999*****999*.6655555555677888*******8 PP == domain 6 score: 14.3 bits; conditional E-value: 0.00084 EEEEEESS.SS...EEEEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGH.ss...vtslafspdgawlasGsdDgtvriW 37 clr+++GH + v +l ++g+++a+Gs++++++++ sp|Q9R1A8|COP1_MOUSE 634 CLRSFKGHiNEknfV-GL--ASNGDYIACGSENNSLYLY 669 9*******9555557.88..99***********999875 PP >> sp|O88466|ZN106_MOUSE Zinc finger protein 106 OS=Mus musculus OX=10090 GN=Znf106 PE=1 SV=3 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 14.6 0.0 0.00065 0.056 5 38 .] 1530 1562 .. 1527 1562 .. 0.89 2 ! 20.8 0.5 7.1e-06 0.00061 1 38 [] 1566 1607 .. 1566 1607 .. 0.86 3 ? 8.4 0.0 0.061 5.3 4 36 .. 1653 1689 .. 1650 1691 .. 0.84 4 ? 10.0 0.1 0.019 1.6 3 35 .. 1697 1728 .. 1695 1729 .. 0.75 5 ? 8.1 0.0 0.073 6.3 1 37 [. 1735 1770 .. 1735 1771 .. 0.73 6 ? 5.6 0.1 0.48 41 4 34 .. 1778 1807 .. 1776 1808 .. 0.75 Alignments for each domain: == domain 1 score: 14.6 bits; conditional E-value: 0.00065 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++++GH v+++ + g++l ++s D tvr+++ sp|O88466|ZN106_MOUSE 1530 GSFEGHqAAVNAI--QIFGNFLYTCSADTTVRVYN 1562 6899**777**99..778999************97 PP == domain 2 score: 20.8 bits; conditional E-value: 7.1e-06 TEEEEEEESS.SSEEEEE...EETTSSEEEEEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtsla...fspdgawlasGsdDgtvriWd 38 ++c+++++GH s v++l +s ++ l +Gs D+t+r ++ sp|O88466|ZN106_MOUSE 1566 RKCVGVFEGHtSKVNCLLvthTSGKSSVLYTGSSDHTIRCYN 1607 58********777****99777777777999*88*****987 PP == domain 3 score: 8.4 bits; conditional E-value: 0.061 EEEEESSSS..EEEEEEETTSSE..EEEEETTSEEEE CS WD40 4 lrtltGHss..vtslafspdgaw..lasGsdDgtvri 36 + +++ H++ v++la+ ++ga l+ Gs+D+t+ + sp|O88466|ZN106_MOUSE 1653 QEIFECHGPraVSCLATAQEGARklLVVGSYDCTISV 1689 56799996678*****999999998788*******87 PP == domain 4 score: 10.0 bits; conditional E-value: 0.019 EEEEEESS.SS......EEEEEEETTSSEEEEEETTSEEE CS WD40 3 clrtltGH.ss......vtslafspdgawlasGsdDgtvr 35 +lrtl+GH + v++l ++sGs D++v+ sp|O88466|ZN106_MOUSE 1697 LLRTLEGHsKTvlcmkvVNDL--------VFSGSSDQSVH 1728 689*****7775555544555........889*88*9985 PP == domain 5 score: 8.1 bits; conditional E-value: 0.073 TEEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGHss.vtslafspdgawlasGsdDgtvriW 37 g+++r+++GH++ vt + + g+ +++++ D+ vr++ sp|O88466|ZN106_MOUSE 1735 GELVRIYKGHNHaVTVV--NILGKVMVTACLDKFVRVY 1770 6789******8886555..112444788888*****98 PP == domain 6 score: 5.6 bits; conditional E-value: 0.48 EEEEESSSS.EEEEEEETTSSEEEEEETTSEE CS WD40 4 lrtltGHss.vtslafspdgawlasGsdDgtv 34 l+++ GH++ + ++ +++ + +G++Dg++ sp|O88466|ZN106_MOUSE 1778 LQVYGGHKDmIMCMTIHKSV--IYTGCYDGSI 1807 7899***9998888443333..569*99**98 PP >> sp|Q9WVB2|TLE2_MOUSE Transducin-like enhancer protein 2 OS=Mus musculus OX=10090 GN=Tle2 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.0 0.3 0.00012 0.01 3 38 .] 474 508 .. 472 508 .. 0.89 2 ? 6.9 0.0 0.18 15 12 38 .] 529 555 .. 518 555 .. 0.91 3 ! 13.9 0.2 0.0011 0.097 14 38 .] 575 599 .. 565 599 .. 0.85 4 ! 15.5 0.4 0.00034 0.029 4 38 .] 606 641 .. 603 641 .. 0.89 5 ? 7.4 0.0 0.13 11 6 34 .. 647 678 .. 643 680 .. 0.78 6 ? 9.4 0.0 0.03 2.5 9 37 .. 693 722 .. 687 723 .. 0.85 7 ? 8.1 0.0 0.074 6.4 11 33 .. 737 759 .. 729 764 .. 0.82 Alignments for each domain: == domain 1 score: 17.0 bits; conditional E-value: 0.00012 EEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 +l+tl +H+ v+++ s++ + + +G+ +g v++Wd sp|Q9WVB2|TLE2_MOUSE 474 QLHTL-AHGEvVCAVTISSSTQHVYTGG-KGCVKVWD 508 67888.8*6657****************.*******9 PP == domain 2 score: 6.9 bits; conditional E-value: 0.18 SEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriWd 38 ++s++ pdg+ l+ G++ t+ iWd sp|Q9WVB2|TLE2_MOUSE 529 YIRSCKLLPDGQSLIVGGEASTLSIWD 555 499999********************9 PP == domain 3 score: 13.9 bits; conditional E-value: 0.0011 EEEEEETTSSEEEEEETTSEEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriWd 38 ++la+spd + +s++ Dg++ +Wd sp|Q9WVB2|TLE2_MOUSE 575 YALAVSPDAKVCFSCCSDGNIVVWD 599 6899*******887755*******9 PP == domain 4 score: 15.5 bits; conditional E-value: 0.00034 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +r + GH ++ ++++ s++g+ l +G+ D+tvr Wd sp|Q9WVB2|TLE2_MOUSE 606 VRQFQGHtDGASCIDISDYGTRLWTGGLDNTVRCWD 641 6889***7779***********747999*******9 PP == domain 5 score: 7.4 bits; conditional E-value: 0.13 EEESS.SS..EEEEEEETTSSEEEEEETTSEE CS WD40 6 tltGH.ss..vtslafspdgawlasGsdDgtv 34 l H +s + sl +p+++wla G++ +v sp|Q9WVB2|TLE2_MOUSE 647 QLQQHdFSsqIFSLGHCPNQDWLAVGMESSHV 678 5667863347***************9877776 PP == domain 6 score: 9.4 bits; conditional E-value: 0.03 SS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriW 37 H s+v sl+f + g+w++s ++D+ + W sp|Q9WVB2|TLE2_MOUSE 693 LHeSCVLSLKFASCGRWFVSTGKDNLLNAW 722 59888**************99999987766 PP == domain 7 score: 8.1 bits; conditional E-value: 0.074 SSEEEEEEETTSSEEEEEETTSE CS WD40 11 ssvtslafspdgawlasGsdDgt 33 ssv s++ s++++++++Gs D++ sp|Q9WVB2|TLE2_MOUSE 737 SSVLSCDISRNNKYIVTGSGDKK 759 4599**************87986 PP >> tr|A2AHY8|A2AHY8_MOUSE Pet2 protein OS=Mus musculus OX=10090 GN=Pet2 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 27.3 0.7 6.4e-08 5.5e-06 3 38 .] 345 381 .. 343 381 .. 0.92 2 ? 3.9 0.0 1.6 1.4e+02 8 36 .. 393 424 .. 385 424 .. 0.64 3 ? 4.7 0.0 0.87 75 7 38 .] 546 575 .. 536 575 .. 0.83 4 ! 12.1 0.0 0.0041 0.35 5 37 .. 586 622 .. 582 623 .. 0.86 5 ! 17.0 0.0 0.00011 0.0098 12 38 .] 639 666 .. 627 666 .. 0.84 Alignments for each domain: == domain 1 score: 27.3 bits; conditional E-value: 6.4e-08 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + ++++GH ++v+ + f+++g++lasGsdD +v +Wd tr|A2AHY8|A2AHY8_MOUSE 345 LEHVFEGHsGCVNTVHFNQHGTLLASGSDDLKVIVWD 381 5799****666*************************9 PP == domain 2 score: 3.9 bits; conditional E-value: 1.6 ESS.SSEEEEEEETTSSE..EEEEETTSEEEE CS WD40 8 tGH.ssvtslafspdgaw..lasGsdDgtvri 36 +GH +++ +f p+ + la +++Dg vr+ tr|A2AHY8|A2AHY8_MOUSE 393 SGHkNNILQAKFLPNCNDaiLAMCGRDGQVRV 424 59977787777333333332554666****97 PP == domain 3 score: 4.7 bits; conditional E-value: 0.87 EESSSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGHssvtslafspdgawlasGsdDgtvriWd 38 + +H +tsl +s dg+ ++++ D ++i++ tr|A2AHY8|A2AHY8_MOUSE 546 YPAH--ITSLMYSYDGTEILASYNDEDIYIFN 575 6788..*************9998899999986 PP == domain 4 score: 12.1 bits; conditional E-value: 0.0041 EEEESS..SS.EEEEE.EETTSSEEEEEETTSEEEEE CS WD40 5 rtltGH..ss.vtsla.fspdgawlasGsdDgtvriW 37 + ++GH +s v ++ + p + +++sGsd g++ iW tr|A2AHY8|A2AHY8_MOUSE 586 KRYKGHrnNStVKGVYfYGPRSEFVMSGSDCGHIFIW 622 5699**954489999999999999************* PP == domain 5 score: 17.0 bits; conditional E-value: 0.00011 S.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 s.vtslafspdgawlasGsdDgtvriWd 38 + +++++ +p+ + las++ D+ v+iW+ tr|A2AHY8|A2AHY8_MOUSE 639 GtINCIDSHPYLPVLASSGLDHEVKIWS 666 24**************9999*******5 PP >> sp|Q810D6|GRWD1_MOUSE Glutamate-rich WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Grwd1 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 2.9 0.0 3.3 2.9e+02 3 37 .. 206 242 .. 204 243 .. 0.69 2 ! 26.1 0.1 1.6e-07 1.3e-05 4 38 .] 254 290 .. 252 290 .. 0.89 3 ! 24.1 0.2 6.9e-07 5.9e-05 6 38 .] 303 336 .. 298 336 .. 0.90 4 ! 18.5 0.0 3.8e-05 0.0033 1 38 [] 343 382 .. 343 382 .. 0.84 Alignments for each domain: == domain 1 score: 2.9 bits; conditional E-value: 3.3 EEEEEESS..SSEEEEEEETTSSE.......EEEEETTSEEEEE CS WD40 3 clrtltGH..ssvtslafspdgaw.......lasGsdDgtvriW 37 ++ ++ GH + +l +w l++G+ ++v++W sp|Q810D6|GRWD1_MOUSE 206 PIFSFAGHmgEGF-AL------DWsprvpgrLLTGDCQKNVHLW 242 6777888874334.77......555555557789*77******9 PP == domain 2 score: 26.1 bits; conditional E-value: 1.6e-07 EEEEESS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawl.asGsdDgtvriWd 38 +r + GH sv +l++sp + + as+s D ++riWd sp|Q810D6|GRWD1_MOUSE 254 QRPFVGHtRSVEDLQWSPTEDTVfASCSADASIRIWD 290 67899**777************8468999*******9 PP == domain 3 score: 24.1 bits; conditional E-value: 6.9e-07 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 t t+H ++v+ +++s+ ++l+sG+dDg +++Wd sp|Q810D6|GRWD1_MOUSE 303 TATAHdGDVNVISWSRREPFLLSGGDDGALKVWD 336 4579*888*************************9 PP == domain 4 score: 18.5 bits; conditional E-value: 3.8e-05 TEEEEEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 g+++ t++ H +vts+ ++p + ++ +++ D+ + Wd sp|Q810D6|GRWD1_MOUSE 343 GSPVATFKQHmAPVTSVEWHPQDSGVFaASGADNQITQWD 382 57999************999998887423455*******9 PP >> sp|A6H603|NWD1_MOUSE NACHT domain- and WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Nwd1 PE=2 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 14.0 0.0 0.001 0.088 6 38 .] 863 896 .. 858 896 .. 0.88 2 ! 21.9 0.0 3.2e-06 0.00028 2 38 .] 901 938 .. 900 938 .. 0.92 3 ? 4.8 0.0 0.86 74 18 38 .] 1136 1156 .. 1122 1156 .. 0.81 4 ! 14.5 0.0 0.00073 0.063 4 38 .] 1381 1416 .. 1377 1416 .. 0.88 5 ? 9.8 0.1 0.022 1.9 12 37 .. 1435 1460 .. 1424 1461 .. 0.85 Alignments for each domain: == domain 1 score: 14.0 bits; conditional E-value: 0.001 EEE.SSSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tlt.GHssvtslafspdgawlasGsdDgtvriWd 38 tlt H+++t++a+s + ++l+ G+ Dg +Wd sp|A6H603|NWD1_MOUSE 863 TLTgCHKGITAIAWSLEEKLLVVGTQDGAMVVWD 896 56635699*************************9 PP == domain 2 score: 21.9 bits; conditional E-value: 3.2e-06 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 q +++l GH v ++++ g++ +s+s+D+t+r+W+ sp|A6H603|NWD1_MOUSE 901 QVVHVLMGHtAEVKCVRVFAQGTLAISASKDHTLRLWS 938 679999***777************99***********5 PP == domain 3 score: 4.8 bits; conditional E-value: 0.86 EETTSSEEEEEETTSEEEEEE CS WD40 18 fspdgawlasGsdDgtvriWd 38 p+++++++Gs+D + +W+ sp|A6H603|NWD1_MOUSE 1136 LGPENNLIITGSRDALIQVWS 1156 6799999*************5 PP == domain 4 score: 14.5 bits; conditional E-value: 0.00073 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + l++H s v+++ +s++ ++ +sG +D + +Wd sp|A6H603|NWD1_MOUSE 1381 VFPLEAHgSRVSCVEVSHSEQLAVSGAEDALLCLWD 1416 45578**777*************************9 PP == domain 5 score: 9.8 bits; conditional E-value: 0.022 SEEEEEEETTSSEEEEEETTSEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriW 37 +v++ +fs+d + +++G++D++v W sp|A6H603|NWD1_MOUSE 1435 GVRCACFSRDDKHVFAGMEDRSVTAW 1460 399*******************9777 PP >> sp|Q8VC51|TCAB1_MOUSE Telomerase Cajal body protein 1 OS=Mus musculus OX=10090 GN=Wrap53 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 8.6 0.1 0.054 4.6 13 38 .] 156 181 .. 141 181 .. 0.87 2 ? 2.1 0.1 6.2 5.3e+02 18 38 .] 222 242 .. 205 242 .. 0.83 3 ! 15.2 0.0 0.00043 0.037 14 37 .. 265 287 .. 247 288 .. 0.83 4 ! 11.2 0.0 0.0079 0.68 9 34 .. 307 333 .. 299 339 .. 0.81 5 ! 24.1 0.1 6.5e-07 5.5e-05 2 38 .] 342 380 .. 341 380 .. 0.87 6 ? 10.6 0.1 0.012 1.1 15 38 .] 404 425 .. 383 425 .. 0.73 Alignments for each domain: == domain 1 score: 8.6 bits; conditional E-value: 0.054 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 ++++ pdg+ +++ s D+ +ri++ sp|Q8VC51|TCAB1_MOUSE 156 LKGCKWAPDGSCILTNSADNVLRIYN 181 56899*********9899******98 PP == domain 2 score: 2.1 bits; conditional E-value: 6.2 EETTSSEEEEEETTSEEEEEE CS WD40 18 fspdgawlasGsdDgtvriWd 38 ++pd +++as+s+ + ++iWd sp|Q8VC51|TCAB1_MOUSE 222 TQPDTSYVASSSRENPIHIWD 242 689******999999899998 PP == domain 3 score: 15.2 bits; conditional E-value: 0.00043 EEEEEETTSSEEEEEETTSEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriW 37 +sl+fspdg+ l++G ++tvr++ sp|Q8VC51|TCAB1_MOUSE 265 HSLCFSPDGSQLFCGF-NRTVRVF 287 69***********999.*****97 PP == domain 4 score: 11.2 bits; conditional E-value: 0.0079 SSSS.EEEEEEETTSSEEEEEETTSEE CS WD40 9 GHss.vtslafspdgawlasGsdDgtv 34 G+s+ ++++afsp++++ a+Gs+ +t+ sp|Q8VC51|TCAB1_MOUSE 307 GQSGiISCIAFSPSQPLYACGSYGRTI 333 675557***********9999988887 PP == domain 5 score: 24.1 bits; conditional E-value: 6.5e-07 EEEEEEESS.SSEEEEEEETTSSEEEEEE.TTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGs.dDgtvriWd 38 ++l l GH +++t+l+f+pdg++++sG +D + Wd sp|Q8VC51|TCAB1_MOUSE 342 SPLALLGGHqGGITHLCFHPDGNLFFSGArKDAELLCWD 380 6788899**888****************74699999998 PP == domain 6 score: 10.6 bits; conditional E-value: 0.012 EEEEETTSSEEEEEETTSEEEEEE CS WD40 15 slafspdgawlasGsdDgtvriWd 38 + +p+g++l+sG g v +Wd sp|Q8VC51|TCAB1_MOUSE 404 D--LDPSGQFLVSGNTSGVVSVWD 425 3..6**********77*******9 PP >> sp|Q3U821|WDR75_MOUSE WD repeat-containing protein 75 OS=Mus musculus OX=10090 GN=Wdr75 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 27.6 0.4 5.3e-08 4.6e-06 2 38 .] 47 85 .. 46 85 .. 0.94 2 ! 19.5 0.0 1.9e-05 0.0016 14 37 .. 206 229 .. 188 230 .. 0.91 3 ? 2.3 0.1 5.2 4.4e+02 9 33 .. 245 270 .. 236 278 .. 0.74 4 ? 6.0 0.0 0.35 30 12 34 .. 291 313 .. 283 316 .. 0.88 5 ! 14.1 0.0 0.00095 0.081 10 37 .. 440 472 .. 434 472 .. 0.89 6 ? 4.1 0.1 1.4 1.2e+02 14 38 .] 501 524 .. 488 524 .. 0.83 Alignments for each domain: == domain 1 score: 27.6 bits; conditional E-value: 5.3e-08 EEEEEEESSSS.EEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 2 qclrtltGHss.vtslafspdgaw.lasGsdDgtvriWd 38 +c+++l GH++ v+++ ++p++++ l s+s Dgt+++Wd sp|Q3U821|WDR75_MOUSE 47 ECVHILHGHTDlVSGILVNPSNHLqLYSCSFDGTIKLWD 85 8********7779***********999***********9 PP == domain 2 score: 19.5 bits; conditional E-value: 1.9e-05 EEEEEETTSSEEEEEETTSEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriW 37 t++a +p + +asG++Dg++r+W sp|Q3U821|WDR75_MOUSE 206 TCVACHPKEDCIASGHMDGKIRLW 229 9*********************** PP == domain 3 score: 2.3 bits; conditional E-value: 5.2 SSSS.EEEEEEETTSSEEEEEETTSE CS WD40 9 GHss.vtslafspdgawlasGsdDgt 33 H + v +laf g+ l+sG++ + sp|Q3U821|WDR75_MOUSE 245 WHHDmVMDLAFTVTGTSLLSGGRECV 270 4524799**************97554 PP == domain 4 score: 6.0 bits; conditional E-value: 0.35 SEEEEEEETTSSEEEEEETTSEE CS WD40 12 svtslafspdgawlasGsdDgtv 34 s+ ++++sp g+++++++ D+++ sp|Q3U821|WDR75_MOUSE 291 SIEHISVSPAGDLFCTSHSDNKI 313 69999************879988 PP == domain 5 score: 14.1 bits; conditional E-value: 0.00095 S.SSEEEEEEETTSSE....EEEEETTSEEEEE CS WD40 10 H.ssvtslafspdgaw....lasGsdDgtvriW 37 H +++t+l+f+ ++ l+++s+Dg+ ++W sp|Q3U821|WDR75_MOUSE 440 HdDHITALCFNNAESYekpiLVTASRDGHFKVW 472 7566*****8888888999899*********** PP == domain 6 score: 4.1 bits; conditional E-value: 1.4 EEEEEETTSSEEEEEETTSEEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriWd 38 t ++fs dg++la + v iWd sp|Q3U821|WDR75_MOUSE 501 TNCCFSEDGSLLAVSF-EEIVTIWD 524 7789********9877.99999998 PP >> sp|Q3TWF6|WDR70_MOUSE WD repeat-containing protein 70 OS=Mus musculus OX=10090 GN=Wdr70 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.8 0.1 0.00014 0.012 10 38 .] 183 213 .. 175 213 .. 0.85 2 ? 3.4 0.0 2.3 1.9e+02 4 29 .. 227 253 .. 224 263 .. 0.76 3 ? 5.9 0.0 0.37 32 23 37 .. 301 314 .. 281 315 .. 0.79 4 ! 14.2 0.0 0.00087 0.074 13 38 .] 337 363 .. 326 363 .. 0.86 5 ! 19.0 0.2 2.8e-05 0.0024 9 38 .] 377 409 .. 368 409 .. 0.78 6 ? 6.8 0.1 0.2 17 14 29 .. 430 445 .. 421 452 .. 0.88 7 ? 3.0 0.0 3.1 2.6e+02 3 36 .. 464 500 .. 462 501 .. 0.74 Alignments for each domain: == domain 1 score: 16.8 bits; conditional E-value: 0.00014 S..SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 H..ssvtslafspdgawlasGsdDgtvriWd 38 H + v++l +p+ga l++G++D v++Wd sp|Q3TWF6|WDR70_MOUSE 183 HgtKTVSALGLDPSGARLVTGGYDYDVKFWD 213 54366999999*******************9 PP == domain 2 score: 3.4 bits; conditional E-value: 2.3 EEEEESSSSEEEEEEETTSSE..EEEEE CS WD40 4 lrtltGHssvtslafspdgaw..lasGs 29 l+ ++ H + sl++s g++ ++sGs sp|Q3TWF6|WDR70_MOUSE 227 LQPCECH-QIKSLQYSNTGDMilVVSGS 253 5667899.8************4435887 PP == domain 3 score: 5.9 bits; conditional E-value: 0.37 SEEEEEETTSEEEEE CS WD40 23 awlasGsdDgtvriW 37 + +++s D tvr+W sp|Q3TWF6|WDR70_MOUSE 301 EF-MTCSNDATVRLW 314 34.58999******* PP == domain 4 score: 14.2 bits; conditional E-value: 0.00087 E.EEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 v.tslafspdgawlasGsdDgtvriWd 38 + t + +s+dg+++a+++ +g++ iWd sp|Q3TWF6|WDR70_MOUSE 337 IpTTCTYSRDGNLVAAACQNGSIQIWD 363 468899*********9**********9 PP == domain 5 score: 19.0 bits; conditional E-value: 2.8e-05 SSSS...EEEEEEETTSSEEEE.EETTSEEEEEE CS WD40 9 GHss...vtslafspdgawlas.GsdDgtvriWd 38 +H++ +++afs dg+ las G+ D t+++Wd sp|Q3TWF6|WDR70_MOUSE 377 AHDPgtdTSCVAFSYDGNVLASrGG-DDTLKLWD 409 662233468***********97689.*******9 PP == domain 6 score: 6.8 bits; conditional E-value: 0.2 EEEEEETTSSEEEEEE CS WD40 14 tslafspdgawlasGs 29 t+++fspd +++++G+ sp|Q3TWF6|WDR70_MOUSE 430 TDCCFSPDDKLIVTGT 445 89************94 PP == domain 7 score: 3.0 bits; conditional E-value: 3.1 EEEEEESS.SS...EEEEEEETTSSEEEEEETTSEEEE CS WD40 3 clrtltGH.ss...vtslafspdgawlasGsdDgtvri 36 +r+++ H ++ v++l ++p + ++ G+ +g ++ sp|Q3TWF6|WDR70_MOUSE 464 FQRVYEIHiTDasvVRCL-WHPKLNQIMVGTGNGLAKV 500 578999998666766888.9999999988854776665 PP >> sp|Q8C5V5|WDR27_MOUSE WD repeat-containing protein 27 OS=Mus musculus OX=10090 GN=Wdr27 PE=2 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 5.0 0.0 0.74 64 4 37 .. 63 98 .. 60 99 .. 0.62 2 ! 18.6 0.1 3.6e-05 0.0031 4 38 .] 156 192 .. 153 192 .. 0.89 3 ? 1.9 0.0 6.9 5.9e+02 22 37 .. 219 234 .. 202 235 .. 0.80 4 ? 6.8 0.0 0.2 17 12 29 .. 511 531 .. 502 539 .. 0.79 5 ! 30.3 1.0 7.3e-09 6.3e-07 7 38 .] 549 581 .. 545 581 .. 0.91 6 ? 5.5 0.0 0.51 44 10 38 .] 655 684 .. 645 684 .. 0.84 Alignments for each domain: == domain 1 score: 5.0 bits; conditional E-value: 0.74 EEEEESSSS..EEEEE..EETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGHss..vtsla..fspdgawlasGsdDgtvriW 37 l tl GH + +t++ ++ d +l+s+s + +W sp|Q8C5V5|WDR27_MOUSE 63 LLTLQGH-HqlITAVVfgNQIDPLLLCSAS-EDYIIMW 98 77999**.4469***654333434466778.5555555 PP == domain 2 score: 18.6 bits; conditional E-value: 3.6e-05 EEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 l +l+GH +svt++ f+p +a l+s s+D++ ++Wd sp|Q8C5V5|WDR27_MOUSE 156 LVELKGHqGSVTAVEFCPWQAHtLISVSEDRSFKVWD 192 5579***888****9999999998889*********9 PP == domain 3 score: 1.9 bits; conditional E-value: 6.9 SSEEEEEETTSEEEEE CS WD40 22 gawlasGsdDgtvriW 37 ++ l++Gs Dg + i+ sp|Q8C5V5|WDR27_MOUSE 219 NQQLVTGSADGQLWIF 234 455789*****99886 PP == domain 4 score: 6.8 bits; conditional E-value: 0.2 S..EEEEEEETTSSEEEEE.E CS WD40 12 s..vtslafspdgawlasG.s 29 + v++l+fs dg+ la+G + sp|Q8C5V5|WDR27_MOUSE 511 PvaVSCLQFSGDGQKLACGlG 531 44489***********98843 PP == domain 5 score: 30.3 bits; conditional E-value: 7.3e-09 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++GH + v+ +++s+d++wl+s ++D+t+r+W+ sp|Q8C5V5|WDR27_MOUSE 549 FSGHdGAVSTICWSHDKRWLLSTGRDRTLRVWS 581 89**666*************99999*******5 PP == domain 6 score: 5.5 bits; conditional E-value: 0.51 SSSEEEEE..EETTSSEEEEEETTSEEEEEE CS WD40 10 Hssvtsla..fspdgawlasGsdDgtvriWd 38 ++tsl+ ++ +++ ++++++D+ v ++d sp|Q8C5V5|WDR27_MOUSE 655 A-DITSLSavNDFYSHIVLTAGRDRAVEVFD 684 4.699999988889999999999****9998 PP >> sp|Q80T85|DCAF5_MOUSE DDB1- and CUL4-associated factor 5 OS=Mus musculus OX=10090 GN=Dcaf5 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 20.1 0.1 1.2e-05 0.001 7 37 .. 49 81 .. 42 82 .. 0.86 2 ? 8.1 0.0 0.074 6.3 9 35 .. 100 126 .. 92 129 .. 0.81 3 ! 17.6 0.1 7.6e-05 0.0065 7 38 .] 139 171 .. 133 171 .. 0.81 4 ? 6.9 0.1 0.19 16 15 38 .] 286 308 .. 273 308 .. 0.78 5 ! 16.9 0.0 0.00013 0.011 6 38 .] 328 361 .. 325 361 .. 0.91 Alignments for each domain: == domain 1 score: 20.1 bits; conditional E-value: 1.2e-05 EESS.SSEEEEE.EETTSSEEEEEETTSEEEEE CS WD40 7 ltGH.ssvtsla.fspdgawlasGsdDgtvriW 37 l GH ++v+++ + g+wl+sG+dD+ v +W sp|Q80T85|DCAF5_MOUSE 49 LLGHfGCVNAIEfSNNGGQWLVSGGDDRRVLLW 81 569*777*****88888888************* PP == domain 2 score: 8.1 bits; conditional E-value: 0.074 SSSSEEEEEEETTSSEEEEEETTSEEE CS WD40 9 GHssvtslafspdgawlasGsdDgtvr 35 Hs++ +laf++ ++ ++sG+ D v sp|Q80T85|DCAF5_MOUSE 100 HHSNIFCLAFNSGNTKVFSGGNDEQVI 126 4588****************9887765 PP == domain 3 score: 17.6 bits; conditional E-value: 7.6e-05 EESS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawl.asGsdDgtvriWd 38 + +H + v++l++sp ++ + as+sdDg v iWd sp|Q80T85|DCAF5_MOUSE 139 F-AHeDAVYGLSVSPVNDNIfASSSDDGRVLIWD 171 4.79777*****9999999735779********9 PP == domain 4 score: 6.9 bits; conditional E-value: 0.19 EEEEETTSSEEEEEETTSEEEEEE CS WD40 15 slafspdgawlasGsdDgtvriWd 38 ++a ++d+ +sGsdD ++++W+ sp|Q80T85|DCAF5_MOUSE 286 CFAGDRDQYI-LSGSDDFNLYMWK 308 5556666555.58**********6 PP == domain 5 score: 16.9 bits; conditional E-value: 0.00013 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +l+GH s v+ ++f+p+ +++s++ + ++iW+ sp|Q80T85|DCAF5_MOUSE 328 VLKGHrSIVNQVRFNPHTYMICSSGVEKIIKIWS 361 799**7779************99999*******5 PP >> sp|Q9DB94|WDR53_MOUSE WD repeat-containing protein 53 OS=Mus musculus OX=10090 GN=Wdr53 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 6.0 0.4 0.35 30 8 33 .. 7 32 .. 3 41 .. 0.71 2 ? 1.7 0.0 8.1 6.9e+02 7 21 .. 48 62 .. 40 77 .. 0.68 3 ? 7.7 0.0 0.1 8.9 9 36 .. 90 120 .. 79 122 .. 0.76 4 ! 11.7 0.0 0.0056 0.48 3 38 .] 128 165 .. 126 165 .. 0.86 5 ? 9.1 0.0 0.036 3.1 10 37 .. 201 224 .. 192 225 .. 0.81 6 ! 28.4 0.0 2.9e-08 2.5e-06 7 38 .] 237 269 .. 230 269 .. 0.87 Alignments for each domain: == domain 1 score: 6.0 bits; conditional E-value: 0.35 ESS.SSEEEEEEETTSSEEEEEETTSE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgt 33 GH ss+ +l ++dg asG++ g sp|Q9DB94|WDR53_MOUSE 7 GGHsSSILCLNANKDGLV-ASGGEGGD 32 49*888****66666666.68886444 PP == domain 2 score: 1.7 bits; conditional E-value: 8.1 EESSSSEEEEEEETT CS WD40 7 ltGHssvtslafspd 21 l+G ++vts+ fs + sp|Q9DB94|WDR53_MOUSE 48 LEGADDVTSVLFSAS 62 567777****55544 PP == domain 3 score: 7.7 bits; conditional E-value: 0.1 SS.SS..EEEEEEETTSSEEEEEETTSEEEE CS WD40 9 GH.ss..vtslafspdgawlasGsdDgtvri 36 H + +++l+ + ++las++d g ++i sp|Q9DB94|WDR53_MOUSE 90 FHvNEeeINCLSLNETESLLASADDSGAIKI 120 2443378**************9999999998 PP == domain 4 score: 11.7 bits; conditional E-value: 0.0056 EEEEEESSSSE.EEEEEETTSSE.EEEEETTSEEEEEE CS WD40 3 clrtltGHssv.tslafspdgaw.lasGsdDgtvriWd 38 +r+l+ Hs++ +s+af p + l+s++ D v++W+ sp|Q9DB94|WDR53_MOUSE 128 VTRSLKRHSNIcSSVAFRPQRPQsLVSCGLDMQVMLWS 165 6799999*77879**999999998889999*******5 PP == domain 5 score: 9.1 bits; conditional E-value: 0.036 SSSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 10 HssvtslafspdgawlasGsdDgtvriW 37 H s+++ + g+ +++G +Dg+vri+ sp|Q9DB94|WDR53_MOUSE 201 H----SVSVASCGNIFSCGAEDGKVRIF 224 3....555566799999999******97 PP == domain 6 score: 28.4 bits; conditional E-value: 2.9e-08 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++GH +v+ ++f p++++l++G+ Dg +r+Wd sp|Q9DB94|WDR53_MOUSE 237 FKGHtLGVSQVCFLPESSLLLTGGNDGRIRLWD 269 68**777*************************9 PP >> sp|Q6NWV3|IF122_MOUSE Intraflagellar transport protein 122 homolog OS=Mus musculus OX=10090 GN=Ift122 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 2.8 0.0 3.6 3.1e+02 12 29 .. 14 33 .. 5 46 .. 0.66 2 ! 28.4 0.0 3e-08 2.6e-06 2 37 .. 44 80 .. 43 81 .. 0.91 3 ? 6.0 0.2 0.35 30 7 31 .. 90 113 .. 83 120 .. 0.76 4 ! 12.1 0.0 0.0043 0.37 4 36 .. 123 158 .. 121 160 .. 0.82 5 ? 3.2 0.0 2.6 2.2e+02 14 36 .. 225 247 .. 217 249 .. 0.87 6 ! 12.7 0.1 0.0027 0.23 7 37 .. 258 289 .. 252 290 .. 0.82 Alignments for each domain: == domain 1 score: 2.8 bits; conditional E-value: 3.6 SEEEEEEETTSSEEE..EEE CS WD40 12 svtslafspdgawla..sGs 29 ++++laf pdg+ l+ +G sp|Q6NWV3|IF122_MOUSE 14 CIYDLAFKPDGTQLIlaAGN 33 599**********6431553 PP == domain 2 score: 28.4 bits; conditional E-value: 3e-08 EEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGHss.vtslafspdgawlasGsdDgtvriW 37 ++l+ l+GH++ v+++a+ +dg+ +asGs D+++ iW sp|Q6NWV3|IF122_MOUSE 44 TLLQPLKGHKDtVYCVAYAKDGKRFASGSADKSIIIW 80 67899****555************************* PP == domain 3 score: 6.0 bits; conditional E-value: 0.35 EESS.SSEEEEEEETTSSEEEEEETT CS WD40 7 ltGH.ssvtslafspdgawlasGsdD 31 + +H +s+ +++++p + las+s sp|Q6NWV3|IF122_MOUSE 90 Y-THnDSIQCVSYNPVTHQLASCS-S 113 3.69666**********99**997.3 PP == domain 4 score: 12.1 bits; conditional E-value: 0.0043 EEEEESS.SS..EEEEEEETTSSEEEEEETTSEEEE CS WD40 4 lrtltGH.ss..vtslafspdgawlasGsdDgtvri 36 +++ + H ss +t++++ dg++la G+ +g + i sp|Q6NWV3|IF122_MOUSE 123 QKSVSKHkSSskITCCSWTNDGQYLALGMANGIISI 158 567788974479************987988988876 PP == domain 5 score: 3.2 bits; conditional E-value: 2.6 EEEEEETTSSEEEEEETTSEEEE CS WD40 14 tslafspdgawlasGsdDgtvri 36 +++++ g +++ G+ D+ v + sp|Q6NWV3|IF122_MOUSE 225 CCISYFTKGEYILVGGSDKQVSL 247 7999999****998977**9987 PP == domain 6 score: 12.7 bits; conditional E-value: 0.0027 EESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriW 37 + s+v+ +++ pd+++++ G+ Dgt+ ++ sp|Q6NWV3|IF122_MOUSE 258 VGEQnSWVWTCRVKPDSNYVVVGCQDGTISFY 289 4445466**********************876 PP >> sp|P59328|WDHD1_MOUSE WD repeat and HMG-box DNA-binding protein 1 OS=Mus musculus OX=10090 GN=Wdhd1 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 20.6 0.1 8.4e-06 0.00072 6 37 .. 12 40 .. 6 41 .. 0.84 2 ? 2.1 0.0 6.1 5.2e+02 14 36 .. 98 120 .. 84 122 .. 0.83 3 ! 34.2 0.1 4.2e-10 3.6e-08 3 38 .] 128 164 .. 126 164 .. 0.93 4 ? 10.0 0.2 0.019 1.6 16 38 .] 236 258 .. 223 258 .. 0.86 Alignments for each domain: == domain 1 score: 20.6 bits; conditional E-value: 8.4e-06 EEESSSSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 6 tltGHssvtslafspdgawlasGsdDgtvriW 37 + +GH t ++f+++g+++++++ Dg vr+W sp|P59328|WDHD1_MOUSE 12 HTEGH---TEVCFDDSGSYIVTCGSDGDVRMW 40 44677...89999*******98866******* PP == domain 2 score: 2.1 bits; conditional E-value: 6.1 EEEEEETTSSEEEEEETTSEEEE CS WD40 14 tslafspdgawlasGsdDgtvri 36 +++ f+ g+ +a+Gs D v++ sp|P59328|WDHD1_MOUSE 98 NHVVFNGAGNKIAAGSSDFLVKV 120 5677899999*****98*99998 PP == domain 3 score: 34.2 bits; conditional E-value: 4.2e-10 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++t++GH +v sl+f+p +las+s Dgtvr+W+ sp|P59328|WDHD1_MOUSE 128 QQQTFRGHdAPVLSLSFDPKDIFLASASCDGTVRVWN 164 689*****888**************9989*******8 PP == domain 4 score: 10.0 bits; conditional E-value: 0.019 EEEETTSSEEEEEETTSEEEEEE CS WD40 16 lafspdgawlasGsdDgtvriWd 38 + +sp g++la+G +g + +W+ sp|P59328|WDHD1_MOUSE 236 VTWSPCGQYLAAGAINGLIVVWN 258 45********************8 PP >> sp|Q9EQ15|GNB1L_MOUSE Guanine nucleotide-binding protein subunit beta-like protein 1 OS=Mus musculus OX=10090 GN=Gnb # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.8 0.0 0.022 1.9 6 38 .] 14 52 .. 10 52 .. 0.79 2 ? 6.0 0.1 0.35 30 3 38 .] 58 95 .. 56 95 .. 0.84 3 ? 8.9 0.0 0.041 3.6 20 38 .] 172 193 .. 146 193 .. 0.74 4 ? 2.4 0.0 4.6 4e+02 7 37 .. 203 234 .. 197 235 .. 0.77 5 ! 11.9 0.0 0.0048 0.41 8 37 .. 246 279 .. 239 281 .. 0.78 6 ! 22.6 0.0 2e-06 0.00017 2 38 .] 285 321 .. 284 321 .. 0.90 Alignments for each domain: == domain 1 score: 9.8 bits; conditional E-value: 0.022 EEESS.SSEEEEEEETTSSE.....EEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgaw.....lasGsdDgtvriWd 38 +l+G s v+ l f+p ++ l+sGs +g v+iW+ sp|Q9EQ15|GNB1L_MOUSE 14 VLRGTqSAVNTLHFCPPSQAagnplLFSGSQNGLVHIWS 52 678886679999877777777777689***********5 PP == domain 2 score: 6.0 bits; conditional E-value: 0.35 EEEEEESS..SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH..ssvtslafspdgawlasGsdDgtvriWd 38 ++tl GH ++v l++ p g+ l+s ++D + +Wd sp|Q9EQ15|GNB1L_MOUSE 58 IVTTLNGHggQGVIWLKTLPQGHQLLSQGRDLRLCLWD 95 57899***64447799999*******7688*******9 PP == domain 3 score: 8.9 bits; conditional E-value: 0.041 TTSSE...EEEEETTSEEEEEE CS WD40 20 pdgaw...lasGsdDgtvriWd 38 ++++ l++G +Dg+v +Wd sp|Q9EQ15|GNB1L_MOUSE 172 TNSSLrplLLAGYEDGSVTLWD 193 44444555889**********9 PP == domain 4 score: 2.4 bits; conditional E-value: 4.6 EESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriW 37 +t H +v +l+f++ +a +sGs + + +W sp|Q9EQ15|GNB1L_MOUSE 203 ITCHeEPVMGLDFDSQKAKGISGSAGKVLAVW 234 4799888****999888885579888888888 PP == domain 5 score: 11.9 bits; conditional E-value: 0.0048 ESS...SS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 8 tGH...ss.vtslafspdgawlasGsdDgtvriW 37 ++H ++ + + pd++ la++++D+ +r++ sp|Q9EQ15|GNB1L_MOUSE 246 KTHeltNPgIAEVTIRPDHKILATAGWDHRIRVF 279 5665544468888899****************96 PP == domain 6 score: 22.6 bits; conditional E-value: 2e-06 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++l +l H +v+++af dg + a+Gs+D+ + iW+ sp|Q9EQ15|GNB1L_MOUSE 285 KPLAVLAFHsAPVYCVAFAADGLL-AAGSKDQRISIWS 321 68889999*777************.67**********5 PP >> sp|Q920I9|WDR7_MOUSE WD repeat-containing protein 7 OS=Mus musculus OX=10090 GN=Wdr7 PE=1 SV=3 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 11.8 0.7 0.005 0.43 9 38 .] 19 47 .. 14 47 .. 0.87 2 ? 8.4 0.0 0.059 5 9 38 .] 62 95 .. 55 95 .. 0.88 3 ! 19.2 0.1 2.4e-05 0.002 4 38 .] 457 498 .. 454 498 .. 0.87 4 ! 14.0 0.1 0.001 0.089 10 37 .. 559 587 .. 550 588 .. 0.87 5 ! 22.1 0.2 2.9e-06 0.00025 2 37 .. 1385 1421 .. 1384 1422 .. 0.82 Alignments for each domain: == domain 1 score: 11.8 bits; conditional E-value: 0.005 SSSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GHssvtslafspdgawlasGsdDgtvriWd 38 +H +++s+ +dg +++G+ Dg + +Wd sp|Q920I9|WDR7_MOUSE 19 TH-CISSILLTDDGGTIVTGCHDGQICLWD 47 46.688999999999999**88*******9 PP == domain 2 score: 8.4 bits; conditional E-value: 0.059 SS.SSEEEEE...EETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtsla...fspdgawlasGsdDgtvriWd 38 GH s+t+l+ s d+++ +s+s +g +Wd sp|Q920I9|WDR7_MOUSE 62 GHtASITCLSkacASGDKRYTVSASANGEMCLWD 95 9*888****99999999999888899*******9 PP == domain 3 score: 19.2 bits; conditional E-value: 2.4e-05 EEEEESS.SSEEEEE......EETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtsla......fspdgawlasGsdDgtvriWd 38 rtl+GH + vt+l d+++l+sG+ D +v iWd sp|Q920I9|WDR7_MOUSE 457 HRTLRGHrNKVTCLLyphqvsARYDQRYLISGGVDFSVIIWD 498 589****999****88888777777777*************9 PP == domain 4 score: 14.0 bits; conditional E-value: 0.001 S.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvriW 37 H +++ +++ p+ ++l+ G+ Dg+v++W sp|Q920I9|WDR7_MOUSE 559 HlFPIQVIKWRPSDDYLVVGCTDGSVYVW 587 878898999***********99******* PP == domain 5 score: 22.1 bits; conditional E-value: 2.9e-06 EEEEEEESS.SSEEEEEEETTSSEEEEEE.TTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGs.dDgtvriW 37 +c+++ GH +++t+++f pdg++la+ s D ++ +W sp|Q920I9|WDR7_MOUSE 1385 KCQTI-HGHkGPITAVSFAPDGRYLATYSnTDSHISFW 1421 56666.6**777*************985435******* PP >> sp|O89053|COR1A_MOUSE Coronin-1A OS=Mus musculus OX=10090 GN=Coro1a PE=1 SV=5 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 24.0 0.2 7e-07 6e-05 9 37 .. 79 109 .. 72 110 .. 0.87 2 ! 18.6 0.0 3.6e-05 0.0031 2 38 .] 122 160 .. 121 160 .. 0.85 3 ! 19.2 0.1 2.3e-05 0.002 9 36 .. 174 202 .. 166 204 .. 0.89 4 ? 1.5 0.0 8.9 7.7e+02 18 35 .. 275 293 .. 259 296 .. 0.78 Alignments for each domain: == domain 1 score: 24.0 bits; conditional E-value: 7e-07 SS.SSEEEEEEETTSSEE.EEEETTSEEEEE CS WD40 9 GH.ssvtslafspdgawl.asGsdDgtvriW 37 GH +v ++a++p+++ + asGs+D+tv++W sp|O89053|COR1A_MOUSE 79 GHtAPVLDIAWCPHNDNViASGSEDCTVMVW 109 9*888************73699********* PP == domain 2 score: 18.6 bits; conditional E-value: 3.6e-05 EEEEEEESS.SSEEEEEEETTSSEEE..EEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawla..sGsdDgtvriWd 38 +++ tl+GH + v +a++p + ++ +G+ D+ + +Wd sp|O89053|COR1A_MOUSE 122 EPVITLEGHtKRVGIVAWHPTAQNVLlsAGC-DNVILVWD 160 7899*****999*9999*******6332677.*******9 PP == domain 3 score: 19.2 bits; conditional E-value: 2.3e-05 SS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvri 36 H + ++s+++s+dga+++++++D+ vr+ sp|O89053|COR1A_MOUSE 174 VHpDTIYSVDWSRDGALICTSCRDKRVRV 202 68777**************9999*****8 PP == domain 4 score: 1.5 bits; conditional E-value: 8.9 EETTSSEEE.EE.ETTSEEE CS WD40 18 fspdgawla.sG.sdDgtvr 35 f+pd + + +G + D ++r sp|O89053|COR1A_MOUSE 275 FDPDTNIVYlCGkG-DSSIR 293 99999998449988.***99 PP >> sp|Q9D565|WDR64_MOUSE WD repeat-containing protein 64 OS=Mus musculus OX=10090 GN=Wdr64 PE=2 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.3 0.0 2.6 2.2e+02 18 38 .] 159 190 .. 134 190 .. 0.64 2 ? 9.8 0.0 0.023 1.9 14 37 .. 327 350 .. 318 351 .. 0.87 3 ? 3.4 0.0 2.2 1.9e+02 2 38 .] 357 394 .. 356 394 .. 0.77 4 ! 16.4 0.0 0.00019 0.016 6 38 .] 493 528 .. 488 528 .. 0.82 5 ? 6.0 0.0 0.35 30 12 38 .] 646 674 .. 632 674 .. 0.73 6 ? 9.7 0.0 0.024 2 19 37 .. 777 795 .. 752 796 .. 0.87 7 ! 11.3 0.0 0.0072 0.62 4 38 .] 858 893 .. 855 893 .. 0.75 Alignments for each domain: == domain 1 score: 3.3 bits; conditional E-value: 2.6 EETTSSEEEEEET............TSEEEEEE CS WD40 18 fspdgawlasGsd............DgtvriWd 38 +s+d +w+ +G+d +t+ +Wd sp|Q9D565|WDR64_MOUSE 159 NSQDTSWI-TGCDylgqlkrivattERTIIVWD 190 44455553.344333333333333399999998 PP == domain 2 score: 9.8 bits; conditional E-value: 0.023 EEEEEETTSSEEEEEETTSEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriW 37 +s++++ + +++G+dD+ +r+W sp|Q9D565|WDR64_MOUSE 327 NSFCYCGKANVIVTGGDDKVLRLW 350 567777888899************ PP == domain 3 score: 3.4 bits; conditional E-value: 2.2 EEEEEEESS.SSEEEEEEETTSSEEEE.EETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlas.GsdDgtvriWd 38 +++++l GH +s+t + + + ++s +s + r+Wd sp|Q9D565|WDR64_MOUSE 357 KPVGKLVGHmFSITEIVSNEKEQHVISlSS-AKVFRVWD 394 688999********9977766666665335.89999998 PP == domain 4 score: 16.4 bits; conditional E-value: 0.00019 EEESS.SS..EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ss..vtslafspdgawlasGsdDgtvriWd 38 +l+ H s t+ a + +g ++a+G ++gtv+iWd sp|Q9D565|WDR64_MOUSE 493 ILDPHgLSieLTCAAIDESGYLFATGAYNGTVKIWD 528 556675343459**************99*******9 PP == domain 5 score: 6.0 bits; conditional E-value: 0.35 SEEEEE.EETTSSE.EEEEETTSEEEEEE CS WD40 12 svtsla.fspdgaw.lasGsdDgtvriWd 38 +v++++ f+ +g +a+G+ +g + +W+ sp|Q9D565|WDR64_MOUSE 646 DVNCIDvFQTEGYNlIACGTTNGMIILWN 674 389998755555552567778*******8 PP == domain 6 score: 9.7 bits; conditional E-value: 0.024 ETTSSEEEEEETTSEEEEE CS WD40 19 spdgawlasGsdDgtvriW 37 p ++l+s+++Dg++r+W sp|Q9D565|WDR64_MOUSE 777 EPQPPLLVSAHEDGHLRLW 795 677889************* PP == domain 7 score: 11.3 bits; conditional E-value: 0.0072 EEEEESSSS..EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGHss..vtslafspdgawlasGsdDgtvriWd 38 l ++++H s + + + ++++++++s Dg+vriW+ sp|Q9D565|WDR64_MOUSE 858 LLSWRAH-SleIIQVIYVEEKQLVLTASIDGSVRIWN 893 6677778.43544776777788899***********8 PP >> sp|Q9DC22|DCAF6_MOUSE DDB1- and CUL4-associated factor 6 OS=Mus musculus OX=10090 GN=Dcaf6 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.6 0.1 0.00016 0.014 5 35 .. 45 76 .. 41 77 .. 0.86 2 ? 3.2 0.1 2.6 2.2e+02 7 34 .. 90 120 .. 83 121 .. 0.65 3 ? 7.3 0.0 0.13 12 8 38 .] 138 170 .. 132 170 .. 0.60 4 ? 5.8 0.0 0.42 36 24 38 .] 206 220 .. 191 220 .. 0.74 5 ? 4.6 0.0 0.93 80 10 32 .. 248 275 .. 242 281 .. 0.70 6 ? 10.4 0.1 0.014 1.2 6 38 .] 728 763 .. 725 763 .. 0.77 7 ! 14.8 0.0 0.00057 0.049 11 38 .] 777 805 .. 768 805 .. 0.87 Alignments for each domain: == domain 1 score: 16.6 bits; conditional E-value: 0.00016 EEEESS.SSEEEEEEETTSSEEEEEETTSEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvr 35 tl H ++v+ +++++ g +++sGsdD ++ sp|Q9DC22|DCAF6_MOUSE 45 ATLNVHdGCVNTICWNDTGEYILSGSDDTKLV 76 67889*777*****************998876 PP == domain 2 score: 3.2 bits; conditional E-value: 2.6 EESS.SSEEEEE..EETTSSEEEEEETTSEE CS WD40 7 ltGH.ssvtsla..fspdgawlasGsdDgtv 34 +GH ++ s + + d + ++s+s Dg + sp|Q9DC22|DCAF6_MOUSE 90 RSGHrANIFSAKflPCTDDKQIVSCSGDGVI 120 3599888999986644444446777669987 PP == domain 3 score: 7.3 bits; conditional E-value: 0.13 ESS.SS...EEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 8 tGH.ss...vtslafspdgaw.lasGsdDgtvriWd 38 t H + + + p+ ++ ++s+++Dgtvr +d sp|Q9DC22|DCAF6_MOUSE 138 TCHyGTtyeIMTV---PNDPYtFLSCGEDGTVRWFD 170 4665334567777...333333558999*****776 PP == domain 4 score: 5.8 bits; conditional E-value: 0.42 EEEEEETTSEEEEEE CS WD40 24 wlasGsdDgtvriWd 38 +la G+ D +vri+d sp|Q9DC22|DCAF6_MOUSE 206 YLAVGCSDSSVRIYD 220 5888866*******8 PP == domain 5 score: 4.6 bits; conditional E-value: 0.93 S.SS....EEEEEEETTSSEEEEE.ETTS CS WD40 10 H.ss....vtslafspdgawlasG.sdDg 32 H s+ vtsl++s dg+ ++ + s sp|Q9DC22|DCAF6_MOUSE 248 HlSNkscrVTSLCYSEDGQEILVSyS-SD 275 66333578***********9887644.44 PP == domain 6 score: 10.4 bits; conditional E-value: 0.014 EEESS.SS........EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ss........vtslafspdgawlasGsdDgtvriWd 38 +++GH +s ++ ++++sGsd g++ iWd sp|Q9DC22|DCAF6_MOUSE 728 VYKGHrNSrtmikeanFWGA------NFVMSGSDCGHIFIWD 763 68999988888444443455......889************9 PP == domain 7 score: 14.8 bits; conditional E-value: 0.00057 SS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 11 ss.vtslafspdgawlasGsdDgtvriWd 38 ++ v++l+ +p + las++ D ++iW+ sp|Q9DC22|DCAF6_MOUSE 777 NHvVNCLQPHPFDPILASSGIDYDIKIWS 805 4546************************5 PP >> sp|Q4VBE8|WDR18_MOUSE WD repeat-containing protein 18 OS=Mus musculus OX=10090 GN=Wdr18 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 4.8 0.0 0.83 71 12 28 .. 82 98 .. 72 106 .. 0.84 2 ! 14.2 0.3 0.00087 0.075 2 33 .. 112 144 .. 111 149 .. 0.87 3 ! 11.2 0.1 0.0078 0.67 4 37 .. 165 201 .. 162 201 .. 0.83 4 ? 1.5 0.1 9.2 7.9e+02 23 34 .. 228 239 .. 214 243 .. 0.64 5 ! 35.3 0.4 2e-10 1.7e-08 4 38 .] 262 297 .. 259 297 .. 0.93 Alignments for each domain: == domain 1 score: 4.8 bits; conditional E-value: 0.83 SEEEEEEETTSSEEEEE CS WD40 12 svtslafspdgawlasG 28 +vt+l + p+g ++++G sp|Q4VBE8|WDR18_MOUSE 82 PVTCLTTAPNGLYVLAG 98 5************9987 PP == domain 2 score: 14.2 bits; conditional E-value: 0.00087 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgt 33 ++l +l+ H ++v++l+f dg+ ++s+++D+ sp|Q4VBE8|WDR18_MOUSE 112 NLLVILSRHyQDVSCLKFTGDGSHFVSAGKDCL 144 67788999*99******************9985 PP == domain 3 score: 11.2 bits; conditional E-value: 0.0078 EEEEESS.SSEEEEEEETTSSE..EEEEETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgaw..lasGsdDgtvriW 37 ++++ H ++t+l g++ +a++s D+tv++W sp|Q4VBE8|WDR18_MOUSE 165 RHVWSQHtLPITDLHCGFGGPMarVATASLDQTVKLW 201 6788899777****8777777777899********** PP == domain 4 score: 1.5 bits; conditional E-value: 9.2 SEEEEEETTSEE CS WD40 23 awlasGsdDgtv 34 + +++G+ Dg++ sp|Q4VBE8|WDR18_MOUSE 228 HHIFCGGSDGSI 239 34678877**99 PP == domain 5 score: 35.3 bits; conditional E-value: 2e-10 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++++GH + vt+l++s dg+ l+sGs D +vr+Wd sp|Q4VBE8|WDR18_MOUSE 262 GKVFKGHrNQVTCLSVSTDGSVLLSGSHDESVRLWD 297 678****999****************99*******9 PP >> sp|Q8K0G5|EIPR1_MOUSE EARP and GARP complex-interacting protein 1 OS=Mus musculus OX=10090 GN=Eipr1 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 5.5 0.1 0.49 42 12 38 .] 132 163 .. 121 163 .. 0.67 2 ? 6.5 0.0 0.24 20 18 38 .] 192 213 .. 169 213 .. 0.84 3 ! 25.6 0.0 2.3e-07 1.9e-05 9 38 .] 226 257 .. 218 257 .. 0.88 4 ! 13.2 0.1 0.0019 0.16 2 34 .. 263 297 .. 262 299 .. 0.76 5 ! 13.4 0.0 0.0016 0.14 4 36 .. 339 373 .. 336 373 .. 0.89 Alignments for each domain: == domain 1 score: 5.5 bits; conditional E-value: 0.49 S....EEEEEEETTSSE..EEEEETTSEEEEEE CS WD40 12 s....vtslafspdgaw..lasGsdDgtvriWd 38 s v ++ + p g+ ++ + D ++ +Wd sp|Q8K0G5|EIPR1_MOUSE 132 SaqgnVACVVWEPMGDGkkVI-SLADSHILLWD 163 234459999877766667576.655*******9 PP == domain 2 score: 6.5 bits; conditional E-value: 0.24 EETTSSE..EEEEETTSEEEEEE CS WD40 18 fspdgaw..lasGsdDgtvriWd 38 +sp+++ +a++s D t+r Wd sp|Q8K0G5|EIPR1_MOUSE 192 WSPHHNCtqVATAS-DTTLRGWD 213 6777777779****.*******8 PP == domain 3 score: 25.6 bits; conditional E-value: 2.3e-07 SSSS.EEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 9 GHss.vtslafspdgaw.lasGsdDgtvriWd 38 +H+ v++l+f+p++++ las++dD++v++Wd sp|Q8K0G5|EIPR1_MOUSE 226 AHGQlVRDLDFNPNKQYyLASCGDDCKVKFWD 257 784469***********99************9 PP == domain 4 score: 13.2 bits; conditional E-value: 0.0019 EEEEEEESSSS.EEEEEEETTSSEEE.EEETTSEE CS WD40 2 qclrtltGHss.vtslafspdgawla.sGsdDgtv 34 ++++tl+ Hs+ v+s++++++++ l+ +Gs D v sp|Q8K0G5|EIPR1_MOUSE 263 EPVKTLEEHSHwVWSVRYNHSHDQLVlTGSSDSRV 297 6899*****666*****6666666544**889877 PP == domain 5 score: 13.4 bits; conditional E-value: 0.0016 EEEEESS.SSEEEEEEETTSSEEEEE.ETTSEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasG.sdDgtvri 36 + t++ H +sv+++++ + +wl+++ s+Dg + i sp|Q8K0G5|EIPR1_MOUSE 339 IATYEEHeDSVYAVDWASADPWLFASlSYDGRLVI 373 6899***999*************999999*98865 PP >> sp|Q62441|TLE4_MOUSE Transducin-like enhancer protein 4 OS=Mus musculus OX=10090 GN=Tle4 PE=1 SV=4 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 11.0 0.1 0.0094 0.81 10 38 .] 486 514 .. 478 514 .. 0.83 2 ? 7.2 0.0 0.15 13 12 38 .] 535 561 .. 517 561 .. 0.87 3 ! 12.8 0.2 0.0024 0.21 14 38 .] 581 605 .. 571 605 .. 0.85 4 ! 16.1 0.8 0.00023 0.02 3 38 .] 611 647 .. 609 647 .. 0.86 5 ? 6.9 0.0 0.18 15 7 34 .. 654 684 .. 649 686 .. 0.76 6 ? 9.5 0.1 0.027 2.3 10 37 .. 700 728 .. 694 729 .. 0.85 7 ? 6.4 0.1 0.25 22 11 33 .. 743 765 .. 735 770 .. 0.82 Alignments for each domain: == domain 1 score: 11.0 bits; conditional E-value: 0.0094 SSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 Hss.vtslafspdgawlasGsdDgtvriWd 38 H+ v+++ s + + +G+ +g v++Wd sp|Q62441|TLE4_MOUSE 486 HGEvVCAVTISNPTRHVYTGG-KGCVKVWD 514 7555799999999999*****.*******9 PP == domain 2 score: 7.2 bits; conditional E-value: 0.15 SEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriWd 38 ++s++ pdg+ l+ G++ t+ iWd sp|Q62441|TLE4_MOUSE 535 YIRSCRLLPDGRTLIVGGEASTLSIWD 561 3889999*******************9 PP == domain 3 score: 12.8 bits; conditional E-value: 0.0024 EEEEEETTSSEEEEEETTSEEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriWd 38 ++la spd++ +s++ Dg++ +Wd sp|Q62441|TLE4_MOUSE 581 YALAISPDSKVCFSCCSDGNIAVWD 605 6899*******887755*******9 PP == domain 4 score: 16.1 bits; conditional E-value: 0.00023 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++r + GH ++ ++++ s dg+ l +G+ D+tvr Wd sp|Q62441|TLE4_MOUSE 611 LVRQFQGHtDGASCIDISNDGTKLWTGGLDNTVRSWD 647 6899****777999999999999647999*******9 PP == domain 5 score: 6.9 bits; conditional E-value: 0.18 EESS..SS.EEEEEEETTSSEEEEEETTSEE CS WD40 7 ltGH..ss.vtslafspdgawlasGsdDgtv 34 l H +s + sl ++p g wla G+++ +v sp|Q62441|TLE4_MOUSE 654 LQQHdfTSqIFSLGYCPTGEWLAVGMENSNV 684 556753226****************988777 PP == domain 6 score: 9.5 bits; conditional E-value: 0.027 S.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvriW 37 H s+v sl+f + g+w++s ++D+ + W sp|Q62441|TLE4_MOUSE 700 HeSCVLSLKFAHCGKWFVSTGKDNLLNAW 728 7778**************99999987766 PP == domain 7 score: 6.4 bits; conditional E-value: 0.25 SSEEEEEEETTSSEEEEEETTSE CS WD40 11 ssvtslafspdgawlasGsdDgt 33 ssv s++ s d +++++Gs D++ sp|Q62441|TLE4_MOUSE 743 SSVLSCDISVDDKYIVTGSGDKK 765 45999*************87986 PP >> sp|Q920M5|CORO6_MOUSE Coronin-6 OS=Mus musculus OX=10090 GN=Coro6 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 23.9 0.3 7.9e-07 6.8e-05 8 37 .. 78 109 .. 72 110 .. 0.86 2 ! 17.2 0.1 9.8e-05 0.0084 2 38 .] 122 160 .. 121 160 .. 0.84 3 ! 19.2 0.3 2.4e-05 0.002 10 38 .] 174 203 .. 164 203 .. 0.85 4 ? 1.6 0.0 8.8 7.5e+02 16 38 .] 226 250 .. 215 250 .. 0.76 Alignments for each domain: == domain 1 score: 23.9 bits; conditional E-value: 7.9e-07 ESS.SSEEEEEEETTSSEEE.EEETTSEEEEE CS WD40 8 tGH.ssvtslafspdgawla.sGsdDgtvriW 37 tGH ++v +++++p+++ ++ s+sdD tv++W sp|Q920M5|CORO6_MOUSE 78 TGHtGPVLDIDWCPHNDNVIaSASDDTTVMVW 109 7**888************762679******** PP == domain 2 score: 17.2 bits; conditional E-value: 9.8e-05 EEEEEEESS.SSEEEEEEETTSSE..EEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw..lasGsdDgtvriWd 38 +++ tl+GH + v l+++p + l++G+ D+ + iW+ sp|Q920M5|CORO6_MOUSE 122 EPVITLEGHsKRVGILSWHPTARNvlLSAGG-DNVIIIWN 160 58899****888*9999*******4334778.*******8 PP == domain 3 score: 19.2 bits; conditional E-value: 2.4e-05 SSS..EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 Hss..vtslafspdgawlasGsdDgtvriWd 38 H + ++s++++++g++la+ ++D+t+ri d sp|Q920M5|CORO6_MOUSE 174 H-PdvIHSVCWNSNGSLLATTCKDKTLRIID 203 6.3347*************99*******966 PP == domain 4 score: 1.6 bits; conditional E-value: 8.8 EEEETTSSEEEEE.ET..TSEEEEEE CS WD40 16 lafspdgawlasG.sd..DgtvriWd 38 + f dg++l++G s+ + + +Wd sp|Q920M5|CORO6_MOUSE 226 V-FTADGKLLSTGfSRmsERQLALWD 250 4.889********7433499999998 PP >> sp|O35242|FAN_MOUSE Protein FAN OS=Mus musculus OX=10090 GN=Nsmaf PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.8 0.0 0.023 1.9 7 37 .. 629 660 .. 622 661 .. 0.85 2 ? 2.5 0.1 4.5 3.9e+02 19 37 .. 684 702 .. 670 703 .. 0.77 3 ! 18.4 2.4 4.1e-05 0.0036 4 38 .] 710 743 .. 707 743 .. 0.86 4 ? 7.8 0.0 0.092 7.9 10 38 .] 765 794 .. 757 794 .. 0.78 5 ! 14.9 0.9 0.00055 0.047 3 36 .. 800 834 .. 798 836 .. 0.84 6 ? 4.5 0.1 1 87 18 38 .] 855 875 .. 842 875 .. 0.83 7 ! 13.8 0.0 0.0012 0.1 8 38 .] 886 917 .. 880 917 .. 0.78 Alignments for each domain: == domain 1 score: 9.8 bits; conditional E-value: 0.023 EESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriW 37 ++ H vt++a+s +g+ +++ s D t++++ sp|O35242|FAN_MOUSE 629 YKIHkEAVTGIAVSCNGSSVFTTSQDSTLKMF 660 7789555**********************986 PP == domain 2 score: 2.5 bits; conditional E-value: 4.5 ETTSSEEEEEETTSEEEEE CS WD40 19 spdgawlasGsdDgtvriW 37 p + ++s+s+D++v+++ sp|O35242|FAN_MOUSE 684 LPGDTTVISSSWDNNVYFY 702 455666789*******987 PP == domain 3 score: 18.4 bits; conditional E-value: 4.1e-05 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + tl GH + v+ ++++ d + sGs+D tv++W+ sp|O35242|FAN_MOUSE 710 QDTLMGHdDAVSKICWHNDRLY--SGSWDSTVKVWS 743 66888**666******999999..9**********5 PP == domain 4 score: 7.8 bits; conditional E-value: 0.092 S.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvriWd 38 H sv+ + + +++l+sG++ g v iWd sp|O35242|FAN_MOUSE 765 HdVSVNTINLNAVSTLLVSGTKEGMVNIWD 794 7555777777777888*************9 PP == domain 5 score: 14.9 bits; conditional E-value: 0.00055 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvri 36 +l+ + H + v++ afspd++ ++s + Dg + + sp|O35242|FAN_MOUSE 800 LLHQTSCHsGTVCDAAFSPDSRHILSTGVDGCLNV 834 5788899*555************998888**9977 PP == domain 6 score: 4.5 bits; conditional E-value: 1 EETTSSEEEEEETTSEEEEEE CS WD40 18 fspdgawlasGsdDgtvriWd 38 f dg+ ++sGs+ g + +Wd sp|O35242|FAN_MOUSE 855 FVWDGNSVLSGSRSGELLVWD 875 445777788***********9 PP == domain 7 score: 13.8 bits; conditional E-value: 0.0012 ESS.SSEEEEEEETTSSE.......EEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgaw.......lasGsdDgtvriWd 38 GH + vt++ w +++G++D+ +++W+ sp|O35242|FAN_MOUSE 886 QGHtGAVTCM-------WmneqcssIITGGEDRQIMFWK 917 69*777****.......44444445899**********6 PP >> sp|Q99ME2|WDR6_MOUSE WD repeat-containing protein 6 OS=Mus musculus OX=10090 GN=Wdr6 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.2 0.0 0.00042 0.036 6 38 .] 204 237 .. 200 237 .. 0.86 2 ? 7.9 0.3 0.087 7.5 2 38 .] 249 284 .. 248 284 .. 0.77 3 ! 22.9 0.1 1.6e-06 0.00014 2 37 .. 288 325 .. 287 326 .. 0.90 4 ? 2.9 0.0 3.4 2.9e+02 14 36 .. 495 517 .. 490 518 .. 0.82 5 ? 1.9 0.0 7.1 6.1e+02 22 37 .. 880 895 .. 865 895 .. 0.79 6 ? 1.9 0.0 7.1 6.1e+02 25 38 .] 936 949 .. 907 949 .. 0.67 7 ! 13.2 0.2 0.0018 0.15 2 37 .. 975 1014 .. 974 1015 .. 0.81 Alignments for each domain: == domain 1 score: 15.2 bits; conditional E-value: 0.00042 EEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGHss.vtslafspdgawlasGsdDgtvriWd 38 +GH + + s+++ ++ +la++s+D++vr+W+ sp|Q99ME2|WDR6_MOUSE 204 RVSGHVGvIFSMSYLESKGLLATASEDRSVRLWK 237 568**5537***99999999*************6 PP == domain 2 score: 7.9 bits; conditional E-value: 0.087 EEEEEEESSSS.EEEEEEETTSSE....EEEEETTSEEEEEE CS WD40 2 qclrtltGHss.vtslafspdgaw....lasGsdDgtvriWd 38 q+++++ GHs v+ + ++ l+s+++D+ + +W+ sp|Q99ME2|WDR6_MOUSE 249 QNIGHCFGHSArVWQV------KLlenyLISAGEDCVCLVWS 284 5677777994459999......775666789999*******5 PP == domain 3 score: 22.9 bits; conditional E-value: 1.6e-06 EEEEEEESS.SS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ss.vtslafspdgawlasGsdDgtvriW 37 + l+ ++GH + ++++a++ +aw+++G+dD +r+W sp|Q99ME2|WDR6_MOUSE 288 EILQAFRGHrGRgIRAIATHERQAWVVTGGDDSGIRLW 325 67889****8447************************* PP == domain 4 score: 2.9 bits; conditional E-value: 3.4 EEEEEETTSSEEEEEETTSEEEE CS WD40 14 tslafspdgawlasGsdDgtvri 36 t+ af p g++l++G++ g+v++ sp|Q99ME2|WDR6_MOUSE 495 TCSAFLPPGDFLVCGDRRGSVML 517 67789********8887777766 PP == domain 5 score: 1.9 bits; conditional E-value: 7.1 SSEEE.EEETTSEEEEE CS WD40 22 gawla.sGsdDgtvriW 37 g+++a ++s Dg vr++ sp|Q99ME2|WDR6_MOUSE 880 GPLVAaACS-DGAVRLF 895 566762567.*****85 PP == domain 6 score: 1.9 bits; conditional E-value: 7.1 EEEEETTSEEEEEE CS WD40 25 lasGsdDgtvriWd 38 l+s+ Dg++ +Wd sp|Q99ME2|WDR6_MOUSE 936 LCSAATDGSLAFWD 949 445556*******9 PP == domain 7 score: 13.2 bits; conditional E-value: 0.0018 EEEEEEESS.SSEEEEE..EETTSSEE.EEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtsla..fspdgawl.asGsdDgtvriW 37 ++ t +H ++v+sl p+g+ l asGs+Dg+++++ sp|Q99ME2|WDR6_MOUSE 975 TPSMTVQAHsCGVNSLHtlPTPEGHHLvASGSEDGSLHVF 1014 5677899**777****999888888862699******986 PP >> sp|E9Q743|CF251_MOUSE Cilia- and flagella-associated protein 251 OS=Mus musculus OX=10090 GN=Wdr66 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 24.4 0.1 5.4e-07 4.6e-05 2 38 .] 439 478 .. 438 478 .. 0.92 2 ! 10.9 0.0 0.0098 0.84 13 38 .] 759 784 .. 749 784 .. 0.92 3 ? 3.0 0.0 3 2.6e+02 13 36 .. 802 825 .. 789 827 .. 0.82 4 ? 6.9 0.1 0.18 15 11 35 .. 844 868 .. 838 871 .. 0.83 5 ! 11.0 0.0 0.0093 0.79 9 38 .] 1039 1070 .. 1029 1070 .. 0.83 Alignments for each domain: == domain 1 score: 24.4 bits; conditional E-value: 5.4e-07 EEEEEEESS.SSEEEEEEETTSSEEEEEET..TSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsd..DgtvriWd 38 +++++l GH + +++l++s d +w+a++++ D+ + iWd sp|E9Q743|CF251_MOUSE 439 NTQYHLQGHpNIISCLCVSEDRRWIATADEgpDCLIIIWD 478 6899*****8889*************998788*******9 PP == domain 2 score: 10.9 bits; conditional E-value: 0.0098 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 v++++ +p+++++a Gs g +++Wd sp|E9Q743|CF251_MOUSE 759 VYAVSCHPYQPLIAVGSVCGMIKVWD 784 899**********************9 PP == domain 3 score: 3.0 bits; conditional E-value: 3 EEEEEEETTSSEEEEEETTSEEEE CS WD40 13 vtslafspdgawlasGsdDgtvri 36 v +l ++p+ga+l +G gtv+i sp|E9Q743|CF251_MOUSE 802 VQCLTYNPEGALLGAGFTEGTVYI 825 99**********966867999987 PP == domain 4 score: 6.9 bits; conditional E-value: 0.18 SSEEEEEEETTSSEEEEEETTSEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvr 35 ssv++++fs+d++++a+++ + tv sp|E9Q743|CF251_MOUSE 844 SSVSHCCFSHDSNYMATADVNFTVA 868 46999***********998888875 PP == domain 5 score: 11.0 bits; conditional E-value: 0.0093 SS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawla.sGsdDgtvriWd 38 H ++v ++a s dg++ + +G+ D++v W+ sp|E9Q743|CF251_MOUSE 1039 CHpNGVAGMALSYDGRFAFtAGGQDRSVVQWK 1070 79999************653789********5 PP >> sp|E9Q349|WDR25_MOUSE WD repeat-containing protein 25 OS=Mus musculus OX=10090 GN=Wdr25 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 23.5 0.1 1e-06 8.9e-05 3 38 .] 229 268 .. 227 268 .. 0.82 2 ! 15.3 0.1 0.0004 0.034 1 35 [. 273 308 .. 273 311 .. 0.86 3 ? 8.6 0.1 0.054 4.6 4 38 .] 316 353 .. 313 353 .. 0.83 4 ! 14.0 0.0 0.001 0.087 5 37 .. 456 491 .. 453 492 .. 0.78 5 ? 4.0 0.3 1.5 1.3e+02 7 37 .. 502 534 .. 498 535 .] 0.63 Alignments for each domain: == domain 1 score: 23.5 bits; conditional E-value: 1e-06 EEEEEESS.SSEEEEEEETTSSE.........EEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw.........lasGsdDgtvriWd 38 l +l+GH ++v+s+ +w l+s+s+D+t ++W+ sp|E9Q349|WDR25_MOUSE 229 VLFHLRGHrGPVNSI------QWcpvfckshmLLSASMDKTFKVWN 268 6889****999****......66666666666678999*******8 PP == domain 2 score: 15.3 bits; conditional E-value: 0.0004 TEEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlasGsdDgtvr 35 g cl+t++ H v++ ++sp g+ ++sG+ D ++ sp|E9Q349|WDR25_MOUSE 273 GHCLQTYSVHsEAVRAARWSPCGRRILSGGFDFALH 308 57********555****************9887665 PP == domain 3 score: 8.6 bits; conditional E-value: 0.054 EEEEESSSS..EEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 4 lrtltGHss..vtslafspdgawla.sGsdDgtvriWd 38 +++++G+s+ vt l+f+p + ++ +G+ ++ Wd sp|E9Q349|WDR25_MOUSE 316 TQVFSGQSDfrVTTLKFHPKDHNVFlCGGFSSEIKAWD 353 57899**5568*****9999999744999899999998 PP == domain 4 score: 14.0 bits; conditional E-value: 0.001 EEEESS..SS..EEEEEEETTSSEEEEEETTSEEEEE CS WD40 5 rtltGH..ss..vtslafspdgawlasGsdDgtvriW 37 r ++GH + v ++ sp g++l++Gs Dg v ++ sp|E9Q349|WDR25_MOUSE 456 RRYEGHkvEGyaV-GCECSPCGDLLVTGSADGRVLMF 491 5689995422556.6669**************99875 PP == domain 5 score: 4.0 bits; conditional E-value: 1.5 EESS.SSEEEEEEETTSSEEE.EEETTSEEEEE CS WD40 7 ltGH.ssvtslafspdgawla.sGsdDgtvriW 37 l GH + + ++p + ++ ++s+ g ++iW sp|E9Q349|WDR25_MOUSE 502 LQGHtQACLGTTYHPVLPSVLgTCSWGGDIKIW 534 566733322333444445566689********* PP >> sp|Q5U4F6|WDR34_MOUSE WD repeat-containing protein 34 OS=Mus musculus OX=10090 GN=Wdr34 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 7.3 0.3 0.14 12 3 32 .. 147 185 .. 145 188 .. 0.69 2 ? 9.9 0.0 0.02 1.7 12 38 .] 218 245 .. 208 245 .. 0.90 3 ? 7.0 0.0 0.17 15 9 37 .. 263 297 .. 256 298 .. 0.80 4 ! 14.2 0.1 0.00089 0.077 4 37 .. 384 419 .. 382 420 .. 0.80 5 ? 2.2 0.0 5.5 4.7e+02 3 38 .] 426 463 .. 424 463 .. 0.71 6 ! 12.5 0.0 0.003 0.26 11 37 .. 482 509 .. 469 510 .. 0.70 Alignments for each domain: == domain 1 score: 7.3 bits; conditional E-value: 0.14 EEEEEE.....SS.SSEEEEEEETTSSEEEEE.E..TTS CS WD40 3 clrtlt.....GH.ssvtslafspdgawlasG.s..dDg 32 cl+tl G+ +vt++++++ g+ la++ + dDg sp|Q5U4F6|WDR34_MOUSE 147 CLHTLVyplaqGQgLHVTGISWNSTGSVLACAyGrlDDG 185 7778744453366444*************9764344465 PP == domain 2 score: 9.9 bits; conditional E-value: 0.02 SEEEEEEETTSSEEEEEE.TTSEEEEEE CS WD40 12 svtslafspdgawlasGs.dDgtvriWd 38 v +laf+p ++ +++G+ + g v +Wd sp|Q5U4F6|WDR34_MOUSE 218 AVMCLAFHPTQPSHIAGGlYSGEVLVWD 245 499************99867*******9 PP == domain 3 score: 7.0 bits; conditional E-value: 0.17 SS.SSEEEEEEETTSSE.....EEEEETTSEEEEE CS WD40 9 GH.ssvtslafspdgaw.....lasGsdDgtvriW 37 +H ++v+ + + p+ + ++s+ Dg+v +W sp|Q5U4F6|WDR34_MOUSE 263 THtDPVYQVLWLPEPRHshrfqVLSAATDGKVLLW 297 6977799998888888899999556655******* PP == domain 4 score: 14.2 bits; conditional E-value: 0.00089 EEEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawla.sGsdDgtvriW 37 + t++ H ++v+s++ sp ++ l+ s++ Dg+v+++ sp|Q5U4F6|WDR34_MOUSE 384 QFTFSPHgGPVYSVSCSPFHRNLFlSAGTDGHVHLY 419 578999*888*****89998886335555*****98 PP == domain 5 score: 2.2 bits; conditional E-value: 5.5 EEEEEE.SSSSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 3 clrtlt.GHssvtslafspdgawla.sGsdDgtvriWd 38 +l++l H+ ++++sp ++++ ++s g v ++d sp|Q5U4F6|WDR34_MOUSE 426 PLTSLQlSHKYLFAVRWSPVRPLVFaAASGEGDVQLFD 463 66666557888999*9*******852334488887776 PP == domain 6 score: 12.5 bits; conditional E-value: 0.003 SSEEEEEEETTSSE.EEEEETTSEEEEE CS WD40 11 ssvtslafspdgaw.lasGsdDgtvriW 37 s+v++l f++ ++ la+G+ +g v++W sp|Q5U4F6|WDR34_MOUSE 482 SPVYCLEFNSQQTQlLAAGDAKGMVKVW 509 46*****66666662567878******* PP >> sp|Q8CFJ9|WDR24_MOUSE GATOR complex protein WDR24 OS=Mus musculus OX=10090 GN=Wdr24 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 11.7 0.0 0.0054 0.46 7 38 .] 116 149 .. 110 149 .. 0.82 2 ? 6.8 0.0 0.2 17 4 38 .] 156 192 .. 153 192 .. 0.81 3 ! 27.6 0.2 5.4e-08 4.6e-06 2 38 .] 198 236 .. 197 236 .. 0.85 4 ! 11.2 0.1 0.0078 0.67 9 38 .] 239 282 .. 237 282 .. 0.72 5 ? 6.7 0.0 0.2 17 7 34 .. 293 323 .. 288 325 .. 0.84 Alignments for each domain: == domain 1 score: 11.7 bits; conditional E-value: 0.0054 EESSSS.EEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 7 ltGHss.vtslafspdgawla.sGsdDgtvriWd 38 +t H+ v+ ++f+p a ++ sGs Dg + +d sp|Q8CFJ9|WDR24_MOUSE 116 FTEHKRtVNKVCFHPTEAHVLlSGSQDGFMKCFD 149 7899556************644******888766 PP == domain 2 score: 6.8 bits; conditional E-value: 0.2 EEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 + t++G+ sv++++fs + +as ++g+v +Wd sp|Q8CFJ9|WDR24_MOUSE 156 VSTFSGQsESVRDVQFSIRDYFtFASTFENGNVQLWD 192 789****777****777666666777789*******9 PP == domain 3 score: 27.6 bits; conditional E-value: 5.4e-08 EEEEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 +c r +t+H ++v +++++p+ + la+G++D+ v++Wd sp|Q8CFJ9|WDR24_MOUSE 198 RCERMFTAHnGPVFCCDWHPEDRGwLATGGRDKMVKVWD 236 58999****777****966666556*************9 PP == domain 4 score: 11.2 bits; conditional E-value: 0.0078 SS..SSEEEEE.........EETTSSE.EEEEET..TSEEEEEE CS WD40 9 GH..ssvtsla.........fspdgaw.lasGsd..DgtvriWd 38 +H + +++++ + p+ + la++s+ D+++++Wd sp|Q8CFJ9|WDR24_MOUSE 239 THraKEIHCVQtiasvarvkWRPECRHhLATCSMmvDHNIYVWD 282 566555777766666667778888888667998556*******9 PP == domain 5 score: 6.7 bits; conditional E-value: 0.2 EESSSSE.EEEE..EETTSSEEEEEETTSEE CS WD40 7 ltGHssv.tsla..fspdgawlasGsdDgtv 34 ++ H +v t++a ++d ++l+sGs+D t+ sp|Q8CFJ9|WDR24_MOUSE 293 FEEHRDVtTGIAwrHPHDPSFLLSGSKDSTL 323 667877988998888999999*******998 PP >> sp|Q08122|TLE3_MOUSE Transducin-like enhancer protein 3 OS=Mus musculus OX=10090 GN=Tle3 PE=1 SV=3 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 12.4 0.1 0.0032 0.28 6 38 .] 482 513 .. 477 513 .. 0.83 2 ? 6.0 0.0 0.35 30 12 38 .] 534 560 .. 523 560 .. 0.91 3 ! 11.7 0.1 0.0055 0.47 14 38 .] 580 604 .. 570 604 .. 0.85 4 ! 16.0 1.3 0.00024 0.021 3 38 .] 610 646 .. 608 646 .. 0.88 5 ? 5.8 0.0 0.4 35 7 31 .. 653 680 .. 648 685 .. 0.74 6 ? 8.1 0.1 0.073 6.3 10 37 .. 699 727 .. 692 728 .. 0.85 7 ? 7.4 0.1 0.13 11 11 33 .. 742 764 .. 734 769 .. 0.82 Alignments for each domain: == domain 1 score: 12.4 bits; conditional E-value: 0.0032 EEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGHss.vtslafspdgawlasGsdDgtvriWd 38 tl H+ v+++ s + + +G+ +g v+iWd sp|Q08122|TLE3_MOUSE 482 TL-SHGEvVCAVTISNPTRHVYTGG-KGCVKIWD 513 55.48555799999999999*****.*******9 PP == domain 2 score: 6.0 bits; conditional E-value: 0.35 SEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriWd 38 ++s++ pdg+ l+ G++ t+ iWd sp|Q08122|TLE3_MOUSE 534 YIRSCKLLPDGRTLIVGGEASTLTIWD 560 499999********************9 PP == domain 3 score: 11.7 bits; conditional E-value: 0.0055 EEEEEETTSSEEEEEETTSEEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriWd 38 ++la spd + +s++ Dg++ +Wd sp|Q08122|TLE3_MOUSE 580 YALAISPDAKVCFSCCSDGNIAVWD 604 68999******887755*******9 PP == domain 4 score: 16.0 bits; conditional E-value: 0.00024 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++r + GH ++ ++++ s+dg+ l +G+ D+tvr Wd sp|Q08122|TLE3_MOUSE 610 LVRQFQGHtDGASCIDISHDGTKLWTGGLDNTVRSWD 646 6899****77799***9999999747999*******9 PP == domain 5 score: 5.8 bits; conditional E-value: 0.4 EESS..SS.EEEEEEETTSSEEEEEETT CS WD40 7 ltGH..ss.vtslafspdgawlasGsdD 31 l H +s + sl ++p g wla G++ sp|Q08122|TLE3_MOUSE 653 LQQHdfTSqIFSLGYCPTGEWLAVGMES 680 556753226**************99755 PP == domain 6 score: 8.1 bits; conditional E-value: 0.073 S.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvriW 37 H s+v sl+f g+w++s ++D+ + W sp|Q08122|TLE3_MOUSE 699 HeSCVLSLKFAYCGKWFVSTGKDNLLNAW 727 7778**************99999987766 PP == domain 7 score: 7.4 bits; conditional E-value: 0.13 SSEEEEEEETTSSEEEEEETTSE CS WD40 11 ssvtslafspdgawlasGsdDgt 33 ssv s++ s d +++++Gs D++ sp|Q08122|TLE3_MOUSE 742 SSVLSCDISADDKYIVTGSGDKK 764 4599**************87986 PP >> sp|Q62440|TLE1_MOUSE Transducin-like enhancer protein 1 OS=Mus musculus OX=10090 GN=Tle1 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 11.0 0.1 0.0094 0.8 10 38 .] 483 511 .. 475 511 .. 0.83 2 ? 6.8 0.0 0.2 17 12 38 .] 532 558 .. 515 558 .. 0.89 3 ! 12.8 0.2 0.0024 0.21 14 38 .] 578 602 .. 568 602 .. 0.85 4 ! 16.1 0.8 0.00023 0.02 3 38 .] 608 644 .. 606 644 .. 0.86 5 ? 5.8 0.0 0.4 34 7 31 .. 651 678 .. 646 683 .. 0.74 6 ? 8.1 0.1 0.075 6.4 10 37 .. 697 725 .. 691 726 .. 0.85 7 ? 6.4 0.1 0.25 22 11 33 .. 740 762 .. 732 767 .. 0.82 Alignments for each domain: == domain 1 score: 11.0 bits; conditional E-value: 0.0094 SSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 Hss.vtslafspdgawlasGsdDgtvriWd 38 H+ v+++ s + + +G+ +g v++Wd sp|Q62440|TLE1_MOUSE 483 HGEvVCAVTISNPTRHVYTGG-KGCVKVWD 511 7555799999999999*****.*******9 PP == domain 2 score: 6.8 bits; conditional E-value: 0.2 SEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriWd 38 ++s++ pdg l+ G++ t+ iWd sp|Q62440|TLE1_MOUSE 532 YIRSCKLLPDGCTLIVGGEASTLSIWD 558 489999********************9 PP == domain 3 score: 12.8 bits; conditional E-value: 0.0024 EEEEEETTSSEEEEEETTSEEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriWd 38 ++la spd++ +s++ Dg++ +Wd sp|Q62440|TLE1_MOUSE 578 YALAISPDSKVCFSCCSDGNIAVWD 602 6899*******887755*******9 PP == domain 4 score: 16.1 bits; conditional E-value: 0.00023 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++r + GH ++ ++++ s dg+ l +G+ D+tvr Wd sp|Q62440|TLE1_MOUSE 608 LVRQFQGHtDGASCIDISNDGTKLWTGGLDNTVRSWD 644 6899****777999999999999647999*******9 PP == domain 5 score: 5.8 bits; conditional E-value: 0.4 EESS..SS.EEEEEEETTSSEEEEEETT CS WD40 7 ltGH..ss.vtslafspdgawlasGsdD 31 l H +s + sl ++p g wla G++ sp|Q62440|TLE1_MOUSE 651 LQQHdfTSqIFSLGYCPTGEWLAVGMES 678 556753226**************99755 PP == domain 6 score: 8.1 bits; conditional E-value: 0.075 S.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvriW 37 H s+v sl+f g+w++s ++D+ + W sp|Q62440|TLE1_MOUSE 697 HeSCVLSLKFAYCGKWFVSTGKDNLLNAW 725 7778**************99999987766 PP == domain 7 score: 6.4 bits; conditional E-value: 0.25 SSEEEEEEETTSSEEEEEETTSE CS WD40 11 ssvtslafspdgawlasGsdDgt 33 ssv s++ s d +++++Gs D++ sp|Q62440|TLE1_MOUSE 740 SSVLSCDISVDDKYIVTGSGDKK 762 45999*************87986 PP >> sp|Q8C0P5|COR2A_MOUSE Coronin-2A OS=Mus musculus OX=10090 GN=Coro2a PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 24.5 0.1 5.2e-07 4.4e-05 9 38 .] 80 111 .. 70 111 .. 0.91 2 ! 10.9 0.0 0.0096 0.82 5 38 .] 126 161 .. 119 161 .. 0.73 3 ! 17.5 0.0 8.1e-05 0.0069 3 37 .. 172 207 .. 171 208 .. 0.89 Alignments for each domain: == domain 1 score: 24.5 bits; conditional E-value: 5.2e-07 SS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgaw.lasGsdDgtvriWd 38 GH ++v +++++p +++ +as+s+D t++iW+ sp|Q8C0P5|COR2A_MOUSE 80 GHrGNVLDIKWNPFNDFeIASCSEDATIKIWN 111 9*888**************************8 PP == domain 2 score: 10.9 bits; conditional E-value: 0.0096 EEEESS.SSEEEEE.EETTSSEEE.EEETTSEEEEEE CS WD40 5 rtltGH.ssvtsla.fspdgawla.sGsdDgtvriWd 38 ++l GH v +l ++p a ++ s+++D +v++W+ sp|Q8C0P5|COR2A_MOUSE 126 KELIGHaRRV-GLVeWHPTTANILfSAGYDYKVMVWN 161 4466995448.444599999996558888*******8 PP == domain 3 score: 17.5 bits; conditional E-value: 8.1e-05 EEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGHss.vtslafspdgawlasGsdDgtvriW 37 +++t+ H++ + s++f+ +g++la+ ++D+++ri sp|Q8C0P5|COR2A_MOUSE 172 PVKTINCHQDvILSMSFNTNGSLLATTCKDRKIRIV 207 6789999*8856*************99*******95 PP >> sp|Q60584|FBXW2_MOUSE F-box/WD repeat-containing protein 2 OS=Mus musculus OX=10090 GN=Fbxw2 PE=2 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 12.6 0.1 0.0029 0.25 5 38 .] 142 174 .. 140 174 .. 0.78 2 ? 9.0 0.1 0.039 3.4 1 37 [. 178 211 .. 178 212 .. 0.88 3 ! 23.3 0.1 1.2e-06 0.0001 4 37 .. 219 253 .. 216 253 .. 0.93 4 ! 13.7 0.1 0.0013 0.11 1 37 [. 258 304 .. 258 304 .. 0.78 5 ? 3.0 0.1 3.1 2.6e+02 2 29 .. 313 343 .. 312 351 .. 0.76 Alignments for each domain: == domain 1 score: 12.6 bits; conditional E-value: 0.0029 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +l GH v++l + +dg l++GsdD + ++Wd sp|Q60584|FBXW2_MOUSE 142 SSLIGHsARVYAL-YYKDGL-LCTGSDDLSAKLWD 174 5799**555**99.444444.589**********9 PP == domain 2 score: 9.0 bits; conditional E-value: 0.039 TEEEEEEESSSSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGHssvtslafspdgawlasGsdDgtvriW 37 gqc++ + +H t+ a+ d + l++Gs D+tv W sp|Q60584|FBXW2_MOUSE 178 GQCVYGIQTH---TCAAVKFDEQKLVTGSFDNTVACW 211 6788888899...89999999999**********999 PP == domain 3 score: 23.3 bits; conditional E-value: 1.2e-06 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +++++GH + v s+++s++ + l+sGs D v++W sp|Q60584|FBXW2_MOUSE 219 TQHFRGHtGAVFSVDYSDELDILVSGSADFAVKVW 253 689****777************************* PP == domain 4 score: 13.7 bits; conditional E-value: 0.0013 TEEEEEEESS.SSEEEEE..........EETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGH.ssvtsla..........fspdgawlasGsdDgtvriW 37 g+cl tltGH +vt + sp l+s++ + ++iW sp|Q60584|FBXW2_MOUSE 258 GTCLNTLTGHtEWVTKVVlqkckvksllHSPGDYILLSAD-KYEIKIW 304 68********777887777777777884666666678877.******* PP == domain 5 score: 3.0 bits; conditional E-value: 3.1 EEEEEEESS.SS.EEEEE..EETTSSEEEEEE CS WD40 2 qclrtltGH.ss.vtsla..fspdgawlasGs 29 +cl+tl+ + + +l+ + dg++++++s sp|Q60584|FBXW2_MOUSE 313 KCLKTLSVSeDRsI-CLQprLHFDGKYIVCSS 343 78888887742257.88899999****99776 PP >> sp|Q99J79|DDB2_MOUSE DNA damage-binding protein 2 OS=Mus musculus OX=10090 GN=Ddb2 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.0 0.0 0.019 1.7 14 38 .] 115 140 .. 106 140 .. 0.94 2 ? 2.1 0.1 5.9 5.1e+02 2 29 .. 189 220 .. 188 228 .. 0.77 3 ! 21.6 0.1 4.2e-06 0.00036 2 38 .] 233 271 .. 232 271 .. 0.87 4 ! 12.6 0.0 0.0029 0.25 10 37 .. 287 315 .. 280 316 .. 0.85 5 ? 8.0 0.0 0.079 6.8 9 38 .] 390 419 .. 381 419 .. 0.86 Alignments for each domain: == domain 1 score: 10.0 bits; conditional E-value: 0.019 EEEEEETTSSE.EEEEETTSEEEEEE CS WD40 14 tslafspdgaw.lasGsdDgtvriWd 38 tsla++p ++ la Gs+ g ++iW+ sp|Q99J79|DDB2_MOUSE 115 TSLAWHPTHPStLAVGSKGGDIMIWN 140 799999999999999**********8 PP == domain 2 score: 2.1 bits; conditional E-value: 5.9 EEEEEEESSSS..E..EEEEEETTSSEEEEEE CS WD40 2 qclrtltGHss..v..tslafspdgawlasGs 29 + lr++t +s v +sl++s ++ +++G+ sp|Q99J79|DDB2_MOUSE 189 NILRVYTSSNSckVwfCSLDVSAKSRVVVTGD 220 67889987744587567999999999999985 PP == domain 3 score: 21.6 bits; conditional E-value: 4.2e-06 EEEEEEESS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawl.asGsdDgtvriWd 38 + l+ l+ H + v ++a +p +wl a++s D+tv+iWd sp|Q99J79|DDB2_MOUSE 233 KELWNLRMHkKKVAHVALNPCCDWLlATASIDQTVKIWD 271 67888999*878************736889********9 PP == domain 4 score: 12.6 bits; conditional E-value: 0.0029 S.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvriW 37 H +v++ +fspdga l++ + ++ +r++ sp|Q99J79|DDB2_MOUSE 287 HrHPVNAACFSPDGARLLTTDQNNEIRVY 315 5448**************9999****998 PP == domain 5 score: 8.0 bits; conditional E-value: 0.079 SSSSEEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 9 GHssvtsla.fspdgawlasGsdDgtvriWd 38 G s++tsl f+p g+ las + ++ iW+ sp|Q99J79|DDB2_MOUSE 390 GYSGITSLNeFNPMGDTLASTM-GYHILIWS 419 45679*************9766.*******5 PP >> sp|Q3UDP0|WDR41_MOUSE WD repeat-containing protein 41 OS=Mus musculus OX=10090 GN=Wdr41 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.8 0.0 0.022 1.9 5 38 .] 37 70 .. 33 70 .. 0.65 2 ! 16.4 0.0 0.00018 0.016 2 38 .] 75 119 .. 74 119 .. 0.88 3 ! 16.6 0.0 0.00016 0.014 3 37 .. 317 349 .. 315 350 .. 0.88 4 ? 9.0 0.1 0.038 3.3 3 38 .] 397 432 .. 395 432 .. 0.76 Alignments for each domain: == domain 1 score: 9.8 bits; conditional E-value: 0.022 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +l++H + v+ l +d ++ as++dDg + +W+ sp|Q3UDP0|WDR41_MOUSE 37 LVLEAHrDIVRFLVRLDDFRF-ASAGDDGIIVVWN 70 567788444555544444466.67788*******8 PP == domain 2 score: 16.4 bits; conditional E-value: 0.00018 EEEEEEESS.SSEEEEE.......EETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtsla.......fspdgawlasGsdDgtvriWd 38 ++l +l+GH + +t++ ++++l+++s D+tv +Wd sp|Q3UDP0|WDR41_MOUSE 75 EKLLELRGHtQKITAVIafppldsCEASSQLLLTASADRTVGVWD 119 67889****777****998888888888888999999*******9 PP == domain 3 score: 16.6 bits; conditional E-value: 0.00016 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 c++t +H s++ +++ p+ +++ s+s+Dg vr+W sp|Q3UDP0|WDR41_MOUSE 317 CQKT--AHdSNILHIDKLPNRQLI-SCSEDGAVRMW 349 6777..9*777************7.7999******* PP == domain 4 score: 9.0 bits; conditional E-value: 0.038 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++ l GH ssv + + d+ ++ ++s D+ + +W+ sp|Q3UDP0|WDR41_MOUSE 397 LIGDLIGHsSSVEMFLYFEDHGLV-TCSADHLIILWK 432 567789**7779666566666665.7888*******6 PP >> sp|P33215|NEDD1_MOUSE Protein NEDD1 OS=Mus musculus OX=10090 GN=Nedd1 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 13.8 0.5 0.0012 0.1 8 34 .. 29 60 .. 23 61 .. 0.71 2 ! 12.3 0.0 0.0035 0.3 14 38 .] 81 105 .. 73 105 .. 0.95 3 ! 12.6 0.1 0.0029 0.25 5 32 .. 113 141 .. 109 147 .. 0.83 4 ? 5.1 0.1 0.7 60 8 38 .] 157 191 .. 148 191 .. 0.74 5 ? 3.4 0.0 2.4 2e+02 5 38 .] 199 235 .. 195 235 .. 0.73 6 ? 7.9 0.0 0.089 7.6 3 38 .] 241 276 .. 239 276 .. 0.79 7 ? 6.4 0.0 0.26 22 2 24 .. 282 305 .. 281 321 .. 0.77 Alignments for each domain: == domain 1 score: 13.8 bits; conditional E-value: 0.0012 ESS.SS..EEEEEEETTSSEEEEE..ETTSEE CS WD40 8 tGH.ss..vtslafspdgawlasG..sdDgtv 34 H s+ ++s+++s+++++l+++ s D+ v sp|P33215|NEDD1_MOUSE 29 NPHtSPhgISSICWSSNNNFLVTAssSGDKIV 60 55654466*************86522348776 PP == domain 2 score: 12.3 bits; conditional E-value: 0.0035 EEEEEETTSSEEEEEETTSEEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriWd 38 t+++ ++ + +lasG+ ++tv iWd sp|P33215|NEDD1_MOUSE 81 TCVDLNSTSMYLASGGLNNTVNIWD 105 89999*******************9 PP == domain 3 score: 12.6 bits; conditional E-value: 0.0029 EEEESS.SSEEEEEEETTSSEEEEEETTS CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDg 32 r+l+ H + vt++a++ + ++asGs g sp|P33215|NEDD1_MOUSE 113 RSLKDHkCEVTCVAYNWNDCYIASGSLSG 141 7899**666****************9655 PP == domain 4 score: 5.1 bits; conditional E-value: 0.7 ESS.SS..EEEEEEETTSSEEEEE..ETTSEEEEEE CS WD40 8 tGH.ss..vtslafspdgawlasG..sdDgtvriWd 38 GH s ++++++s + l+ G sd+g v +Wd sp|P33215|NEDD1_MOUSE 157 FGHgSKqpIRHIKYSLFRKSLL-GsvSDNGVVTLWD 191 39962257****8777777799.53579*******9 PP == domain 5 score: 3.4 bits; conditional E-value: 2.4 EEEE.SS.SSEEEEEEETTSSEEEEE.ETTSEEEEEE CS WD40 5 rtlt.GH.ssvtslafspdgawlasG.sdDgtvriWd 38 +t++ +H + ++++fsp + +l+ + D+ + ++d sp|P33215|NEDD1_MOUSE 199 HTFDsTHkAPASGICFSPVNELLFVTiGLDKRIILYD 235 56633785557999********864334499999987 PP == domain 6 score: 7.9 bits; conditional E-value: 0.089 EEEEEESSSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGHssvtslafspdgawlasGsdDgtvriWd 38 +++tl + ++ t+++f pdga la Gs g+++ +d sp|P33215|NEDD1_MOUSE 241 LVKTLVADTPLTAVDFMPDGATLAIGSSRGKIYQYD 276 56777666779***************8677776665 PP == domain 7 score: 6.4 bits; conditional E-value: 0.26 EEEEEEESS.SSEEEEEEETTSSE CS WD40 2 qclrtltGH.ssvtslafspdgaw 24 ++++t+++H +sv ++af+ + ++ sp|P33215|NEDD1_MOUSE 282 SPVKTISAHkTSVQCIAFQYSTSL 305 6899*****888****98777665 PP >> sp|Q9WUM4|COR1C_MOUSE Coronin-1C OS=Mus musculus OX=10090 GN=Coro1c PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 24.5 0.6 5e-07 4.3e-05 7 37 .. 76 108 .. 69 109 .. 0.86 2 ! 15.4 0.1 0.00037 0.032 3 38 .] 122 159 .. 120 159 .. 0.83 3 ! 17.0 0.2 0.00012 0.01 10 38 .] 173 202 .. 167 202 .. 0.92 Alignments for each domain: == domain 1 score: 24.5 bits; conditional E-value: 5e-07 EESS.SSEEEEEEETTSSEE.EEEETTSEEEEE CS WD40 7 ltGH.ssvtslafspdgawl.asGsdDgtvriW 37 GH ++v +++++p+++ + asGs+D+tv++W sp|Q9WUM4|COR1C_MOUSE 76 VCGHtGPVLDIDWCPHNDQViASGSEDCTVMVW 108 459*888************73699********* PP == domain 2 score: 15.4 bits; conditional E-value: 0.00037 EEEEEESS.SSEEEEEEETTSSEEE..EEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawla..sGsdDgtvriWd 38 ++ +l+GH + v +a++p + ++ +G+ D+ + iW+ sp|Q9WUM4|COR1C_MOUSE 122 PVVILEGHsKRVGIVAWHPTARNVLlsAGC-DNAIIIWN 159 77899***888*9999*******6332677.*******8 PP == domain 3 score: 17.0 bits; conditional E-value: 0.00012 SSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 Hss.vtslafspdgawlasGsdDgtvriWd 38 Hs+ ++ +++s++g++++++s+D++vr+ d sp|Q9WUM4|COR1C_MOUSE 173 HSDmIYNVSWSRNGSLICTASKDKKVRVID 202 86789**********************965 PP >> sp|Q8R2U0|SEH1_MOUSE Nucleoporin SEH1 OS=Mus musculus OX=10090 GN=Seh1l PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 21.6 0.9 4e-06 0.00035 10 38 .] 11 40 .. 5 40 .. 0.92 2 ! 11.6 2.6 0.0061 0.52 2 37 .. 48 86 .. 47 87 .. 0.85 3 ? 10.7 0.0 0.011 0.98 11 37 .. 114 142 .. 96 143 .. 0.76 4 ? 4.1 0.6 1.4 1.2e+02 13 32 .. 165 189 .. 151 190 .. 0.74 5 ! 22.4 1.9 2.2e-06 0.00019 6 38 .] 273 306 .. 268 306 .. 0.87 Alignments for each domain: == domain 1 score: 21.6 bits; conditional E-value: 4e-06 SSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 Hss.vtslafspdgawlasGsdDgtvriWd 38 H++ +++++f+ +g+ +a++s D++v++Wd sp|Q8R2U0|SEH1_MOUSE 11 HKDlIHDVSFDFHGRRMATCSSDQSVKVWD 40 87789***************88*******9 PP == domain 2 score: 11.6 bits; conditional E-value: 0.0061 EEEEEEESS.SSEEEEEEETTSSE........EEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw........lasGsdDgtvriW 37 c+ ++++H +sv+ + +w las+s D+t +W sp|Q8R2U0|SEH1_MOUSE 48 HCTASWKTHsGSVWRV------TWahpefgqvLASCSFDRTAAVW 86 79999****777****......777777777799********999 PP == domain 3 score: 10.7 bits; conditional E-value: 0.011 SSEEEEEEETTSSE..EEEEETTSEEEEE CS WD40 11 ssvtslafspdgaw..lasGsdDgtvriW 37 +svt+++f p + la++s Dg vr++ sp|Q8R2U0|SEH1_MOUSE 114 TSVTDVKFAPKHMGlmLATCSADGIVRVY 142 459999766665555579*********98 PP == domain 4 score: 4.1 bits; conditional E-value: 1.4 EEEEEEETTSSE.....EEEEETTS CS WD40 13 vtslafspdgaw.....lasGsdDg 32 ++++++p+++ +a GsdD sp|Q8R2U0|SEH1_MOUSE 165 CSCISWNPSSSRahppmIAVGSDDS 189 47999******999999899*9885 PP == domain 5 score: 22.4 bits; conditional E-value: 2.2e-06 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++ H s v+ ++++ g+ las++dDg vr+W+ sp|Q8R2U0|SEH1_MOUSE 273 QFDNHnSQVWRVSWNITGTVLASSGDDGCVRLWK 306 57889555**************999********6 PP >> sp|Q9QXW2|FBXW5_MOUSE F-box/WD repeat-containing protein 5 OS=Mus musculus OX=10090 GN=Fbxw5 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 28.4 0.3 3e-08 2.6e-06 4 38 .] 85 120 .. 82 120 .. 0.92 2 ? 6.5 0.0 0.24 21 16 38 .] 482 500 .. 458 500 .. 0.77 3 ! 14.2 0.0 0.00092 0.079 3 37 .. 506 541 .. 504 542 .. 0.83 Alignments for each domain: == domain 1 score: 28.4 bits; conditional E-value: 3e-08 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++tl+ H + v +l+fs++g +as+s+D+tv+iW+ sp|Q9QXW2|FBXW5_MOUSE 85 VQTLKEHtDQVLHLSFSHSGYQFASCSKDCTVKIWN 120 789****666*************************8 PP == domain 2 score: 6.5 bits; conditional E-value: 0.24 EEEETTSSEEEEEETTSEEEEEE CS WD40 16 lafspdgawlasGsdDgtvriWd 38 + + +++asG +D++ +iWd sp|Q9QXW2|FBXW5_MOUSE 482 V----SRDFVASGAEDRHGYIWD 500 4....6788*************9 PP == domain 3 score: 14.2 bits; conditional E-value: 0.00092 EEEEEESSSS.EEEEEEETTSSEEE.EEETTSEEEEE CS WD40 3 clrtltGHss.vtslafspdgawla.sGsdDgtvriW 37 cl +l+ H + v+s+afsp + l+ ++sdD t++ W sp|Q9QXW2|FBXW5_MOUSE 506 CLAKLR-HEDvVNSVAFSPQEQELLlTASDDATIKAW 541 677776.86657***********7559********99 PP >> sp|Q6PNC0|DMXL1_MOUSE DmX-like protein 1 OS=Mus musculus OX=10090 GN=Dmxl1 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 12.8 0.3 0.0024 0.21 3 37 .. 159 194 .. 156 194 .. 0.80 2 ? 8.2 0.1 0.07 6 7 37 .. 225 265 .. 220 266 .. 0.81 3 ? 7.6 0.1 0.11 9.2 9 37 .. 969 998 .. 961 999 .. 0.76 4 ? 1.4 0.0 9.8 8.4e+02 13 37 .. 2733 2757 .. 2722 2759 .. 0.79 5 ? 4.4 0.2 1.1 93 10 38 .] 2823 2855 .. 2815 2855 .. 0.75 6 ? 5.6 0.1 0.48 41 3 38 .] 2864 2900 .. 2862 2900 .. 0.87 7 ! 16.7 0.0 0.00015 0.013 6 38 .] 2909 2942 .. 2904 2942 .. 0.89 Alignments for each domain: == domain 1 score: 12.8 bits; conditional E-value: 0.0024 EEEEEESSSSEEEEEEETTSSEEEEEE.TTSEEEEE CS WD40 3 clrtltGHssvtslafspdgawlasGs.dDgtvriW 37 c++++++ s v+ ++fspdg ++a+++ dD+ +++W sp|Q6PNC0|DMXL1_MOUSE 159 CIWHCKTASQVHLMKFSPDGEFFATAGkDDCLLKVW 194 666666665577778*********88757******* PP == domain 2 score: 8.2 bits; conditional E-value: 0.07 EESS.SSEEEEEEETTSSE.........EEEEETTSEEEEE CS WD40 7 ltGH.ssvtslafspdgaw.........lasGsdDgtvriW 37 + +H v+++++ + +++ l+++++D+ +r+W sp|Q6PNC0|DMXL1_MOUSE 225 YLAHpRAVNGFSWRKTSKYmprasvcnvLLTCCKDNVCRLW 265 5578555999988888888888888888889********** PP == domain 3 score: 7.6 bits; conditional E-value: 0.11 SS.SS.....EEEEEEETTSSEEE..EEETTSEEEEE CS WD40 9 GH.ss.....vtslafspdgawla..sGsdDgtvriW 37 GH ss v+s ++l+ s+s D +vr+W sp|Q6PNC0|DMXL1_MOUSE 969 GHlSSssiypVCSA------PYLLatSCS-DDKVRFW 998 89855578889999......997533567.******* PP == domain 4 score: 1.4 bits; conditional E-value: 9.8 EEEEEEETTSSEEEEEETTSEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriW 37 v+ + +p ++ ++G Dg+vr++ sp|Q6PNC0|DMXL1_MOUSE 2733 VRRMTSHPTLPYYLTGAQDGSVRMF 2757 556667888888679********86 PP == domain 5 score: 4.4 bits; conditional E-value: 1.1 S.SSEEEEEEETTSSEEEEE...ETTSEEEEEE CS WD40 10 H.ssvtslafspdgawlasG...sdDgtvriWd 38 H + +++ f ++++++a++ sd++++ +Wd sp|Q6PNC0|DMXL1_MOUSE 2823 HnKTANDFVFVSSSSLIATAglsSDNRNICLWD 2855 6444567778888889997536579*******9 PP == domain 6 score: 5.6 bits; conditional E-value: 0.48 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++ +t H s+ t la+ p +++l+sG+++g i+d sp|Q6PNC0|DMXL1_MOUSE 2864 LVHAFTCHdSGATVLAYAPKHQLLISGGRKGFTCIFD 2900 7899****888999999***********999877776 PP == domain 7 score: 16.7 bits; conditional E-value: 0.00015 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + H s+v ++a +p ++++Gs g+++iW+ sp|Q6PNC0|DMXL1_MOUSE 2909 LFQSHdSPVKAIAIDPTEEYFVTGSAEGNIKIWS 2942 4789*888*************************5 PP >> sp|Q8R2N2|UTP4_MOUSE U3 small nucleolar RNA-associated protein 4 homolog OS=Mus musculus OX=10090 GN=Utp4 PE=2 SV=3 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.7 0.0 0.011 0.97 11 38 .] 17 44 .. 1 44 [. 0.80 2 ! 12.6 0.0 0.0028 0.24 7 37 .. 97 128 .. 92 129 .. 0.84 3 ? 8.8 0.0 0.045 3.9 11 31 .. 146 166 .. 136 171 .. 0.82 4 ? 5.2 0.4 0.61 52 7 36 .. 283 311 .. 277 311 .. 0.72 5 ? 3.1 0.1 3 2.6e+02 9 26 .. 389 406 .. 380 412 .. 0.59 6 ! 12.7 0.1 0.0028 0.24 2 32 .. 472 506 .. 471 512 .. 0.72 7 ? 4.4 0.0 1.1 93 5 34 .. 514 550 .. 511 551 .. 0.75 Alignments for each domain: == domain 1 score: 10.7 bits; conditional E-value: 0.011 SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriWd 38 s+++++a++ ++ la + Dgtv i++ sp|Q8R2N2|UTP4_MOUSE 17 SGIRCVAYNNQSNRLAVSRTDGTVEIYN 44 349************99967******97 PP == domain 2 score: 12.6 bits; conditional E-value: 0.0028 EESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriW 37 l++ ++++s+ sp+g+ l+ G++Dg+v+++ sp|Q8R2N2|UTP4_MOUSE 97 LDAFgGPIWSMTASPSGSQLLVGCEDGSVKLF 128 5555456***********************97 PP == domain 3 score: 8.8 bits; conditional E-value: 0.045 SSEEEEEEETTSSEEEEEETT CS WD40 11 ssvtslafspdgawlasGsdD 31 s + sl+++p g+ +a+Gs D sp|Q8R2N2|UTP4_MOUSE 146 SRILSLCWHPAGTHVAAGSLD 166 3499**************977 PP == domain 4 score: 5.2 bits; conditional E-value: 0.61 EESS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvri 36 + H +v+++a sp sG+ D ++ i sp|Q8R2N2|UTP4_MOUSE 283 FQHHtHDVRAVAHSPTALI--SGGTDTHLVI 311 5555337****88888655..8998*99876 PP == domain 5 score: 3.1 bits; conditional E-value: 3 SS.SSEEEEEEETTSSEEE CS WD40 9 GH.ssvtslafspdgawla 26 G + + + ++sp g+w+a sp|Q8R2N2|UTP4_MOUSE 389 GPeNII-CSCVSPCGSWIA 406 443335.3336******97 PP == domain 6 score: 12.7 bits; conditional E-value: 0.0028 EEEEEEESS.SSEEEEE...EETTSSEEEEEETTS CS WD40 2 qclrtltGH.ssvtsla...fspdgawlasGsdDg 32 ++l+t+ + + v +++ +spdg+wla+++ sp|Q8R2N2|UTP4_MOUSE 472 KHLHTFQPQsGTVEAMCllaVSPDGNWLAASGTSA 506 67889887744498888889********9665455 PP == domain 7 score: 4.4 bits; conditional E-value: 1.1 EEEESSSS.......EEEEEEETTSSEEEEEETTSEE CS WD40 5 rtltGHss.......vtslafspdgawlasGsdDgtv 34 ++l+ H+ vt+la p+ + l+ ++ D+ v sp|Q8R2N2|UTP4_MOUSE 514 HHLKLHCTvpaynfpVTALAIAPNTNNLVIAHSDQQV 550 666666223455667*************999879876 PP >> sp|Q9D180|CFA57_MOUSE Cilia- and flagella-associated protein 57 OS=Mus musculus OX=10090 GN=Cfap57 PE=1 SV=3 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.2 0.0 2.7 2.3e+02 14 27 .. 111 124 .. 98 136 .. 0.84 2 ? 4.8 0.0 0.84 72 12 29 .. 339 356 .. 324 362 .. 0.80 3 ! 16.7 0.0 0.00015 0.013 10 38 .] 387 416 .. 382 416 .. 0.89 4 ! 13.5 0.1 0.0014 0.12 3 38 .] 503 539 .. 501 539 .. 0.82 5 ? 2.8 0.1 3.5 3e+02 14 35 .. 557 578 .. 549 578 .. 0.83 6 ? 2.1 0.0 5.9 5.1e+02 6 37 .. 632 664 .. 626 665 .. 0.85 Alignments for each domain: == domain 1 score: 3.2 bits; conditional E-value: 2.7 EEEEEETTSSEEEE CS WD40 14 tslafspdgawlas 27 ts+afspd+++l++ sp|Q9D180|CFA57_MOUSE 111 TSMAFSPDSKYLLT 124 899********985 PP == domain 2 score: 4.8 bits; conditional E-value: 0.84 SEEEEEEETTSSEEEEEE CS WD40 12 svtslafspdgawlasGs 29 +v +l+fsp+ l++++ sp|Q9D180|CFA57_MOUSE 339 DVLCLCFSPSEETLIAST 356 499**********99776 PP == domain 3 score: 16.7 bits; conditional E-value: 0.00015 S.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvriWd 38 H s+t+l+++ ++++a++s D++vriW+ sp|Q9D180|CFA57_MOUSE 387 HsASITGLDTCIRKPLIATCSLDRSVRIWN 416 7566999999999999*************8 PP == domain 4 score: 13.5 bits; conditional E-value: 0.0014 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++ +l+GH + ++sl ++ d + l+s++ Dg v+ W+ sp|Q9D180|CFA57_MOUSE 503 NINILKGHtGKIRSLVWNLDDSKLVSAGTDGAVYEWN 539 7889****666****98888888887777****9987 PP == domain 5 score: 2.8 bits; conditional E-value: 3.5 EEEEEETTSSEE.EEEETTSEEE CS WD40 14 tslafspdgawl.asGsdDgtvr 35 +s+ +spd + + a Gs D+t++ sp|Q9D180|CFA57_MOUSE 557 NSVTTSPDAKVIfAVGS-DQTLK 578 68889******835789.**997 PP == domain 6 score: 2.1 bits; conditional E-value: 5.9 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriW 37 ++ +H ++v + d ++l++ ++Dg + W sp|Q9D180|CFA57_MOUSE 632 EYQAHaGPVMKMLLTFDDQFLLTVGEDGCLFTW 664 5889988899999999*****99999**99877 PP >> tr|A0A140LHH9|A0A140LHH9_MOUSE Predicted gene, 35339 OS=Mus musculus OX=10090 GN=Gm35339 PE=4 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 7.6 0.0 0.11 9.1 10 37 .. 297 325 .. 293 326 .. 0.74 2 ! 22.5 0.0 2.1e-06 0.00018 3 38 .] 331 367 .. 329 367 .. 0.91 3 ? 10.6 0.4 0.012 1 5 37 .. 597 629 .. 593 630 .. 0.78 4 ! 14.2 0.4 0.0009 0.077 10 37 .. 697 722 .. 686 723 .. 0.89 Alignments for each domain: == domain 1 score: 7.6 bits; conditional E-value: 0.11 SSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 10 Hss.vtslafspdgawlasGsdDgtvriW 37 H+ +++l+++ + + ++++s+D tv++W tr|A0A140LHH9|A0A140LHH9_MOUSE 297 HKTiISDLDYCEEMDAMVTASRDSTVKVW 325 6443688855555555889********** PP == domain 2 score: 22.5 bits; conditional E-value: 2.1e-06 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++ GH ++vt++ + p++++ +s+s Dgt+r Wd tr|A0A140LHH9|A0A140LHH9_MOUSE 331 IRMVFVGHtGPVTAMTVLPNSTLAVSASQDGTIRTWD 367 567899**888*************************9 PP == domain 3 score: 10.6 bits; conditional E-value: 0.012 EEEESSSS..EEEEEEETTSSE...EEEEETTSEEEEE CS WD40 5 rtltGHss..vtslafspdgaw...lasGsdDgtvriW 37 + ++Hs+ vt++ ++w ++sG+ D tv++W tr|A0A140LHH9|A0A140LHH9_MOUSE 597 FHTEAHSPgpVTAI----GSTWssiVTSGG-DLTVKMW 629 56689*4455****....888888567889.******* PP == domain 4 score: 14.2 bits; conditional E-value: 0.0009 SSSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 10 HssvtslafspdgawlasGsdDgtvriW 37 H +t+l+ +p + +a++s D+t+riW tr|A0A140LHH9|A0A140LHH9_MOUSE 697 H--ITGLCCCPTLKIFACSSLDCTIRIW 722 4..**************999******** PP >> sp|Q6ZQA0|NBEL2_MOUSE Neurobeachin-like protein 2 OS=Mus musculus OX=10090 GN=Nbeal2 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 11.3 0.1 0.0074 0.63 13 36 .. 2448 2474 .. 2433 2475 .. 0.75 2 ! 21.2 0.1 5.6e-06 0.00048 3 37 .. 2482 2517 .. 2480 2518 .. 0.88 3 ! 17.1 0.0 0.00011 0.0092 2 36 .. 2532 2567 .. 2531 2568 .. 0.93 Alignments for each domain: == domain 1 score: 11.3 bits; conditional E-value: 0.0074 E..EEEEEETTSSEEEEE.ETTSEEEE CS WD40 13 v..tslafspdgawlasG.sdDgtvri 36 v +la+ pdg++l+sG ++Dg++r+ sp|Q6ZQA0|NBEL2_MOUSE 2448 VsaQALAVAPDGKLLFSGgHWDGSLRV 2474 6224666**********9569****97 PP == domain 2 score: 21.2 bits; conditional E-value: 5.6e-06 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +l l+ H + vt+la + g +l+sGs+D t+++W sp|Q6ZQA0|NBEL2_MOUSE 2482 LLNQLSRHlDIVTCLALDTCGIYLISGSRDTTCMVW 2517 667788897779************************ PP == domain 3 score: 17.1 bits; conditional E-value: 0.00011 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvri 36 +++++l GH v+++a s + ++ +sGs+Dgtv i sp|Q6ZQA0|NBEL2_MOUSE 2532 KPVQVLYGHvAAVSCVAISTELDMAVSGSEDGTVII 2567 68999****999*********************976 PP >> sp|Q8BPN8|DMXL2_MOUSE DmX-like protein 2 OS=Mus musculus OX=10090 GN=Dmxl2 PE=1 SV=3 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 11.7 0.8 0.0053 0.46 15 37 .. 169 197 .. 160 197 .. 0.72 2 ? 10.2 0.2 0.016 1.4 6 37 .. 227 268 .. 222 268 .. 0.79 3 ? 7.5 0.0 0.12 10 9 38 .] 999 1029 .. 992 1029 .. 0.70 4 ? 1.7 0.0 8.2 7e+02 8 37 .. 2766 2786 .. 2757 2787 .. 0.67 5 ? 4.3 0.6 1.2 1e+02 8 38 .] 2845 2879 .. 2839 2879 .. 0.72 6 ? 7.2 0.0 0.15 13 3 38 .] 2888 2924 .. 2886 2924 .. 0.85 7 ! 17.1 0.0 0.00011 0.0096 2 37 .. 2929 2965 .. 2928 2966 .. 0.94 8 ? 6.2 0.0 0.3 26 12 35 .. 2984 3014 .. 2967 3014 .. 0.66 Alignments for each domain: == domain 1 score: 11.7 bits; conditional E-value: 0.0053 EEE.....EETTSSEEEEEE.TTSEEEEE CS WD40 15 sla.....fspdgawlasGs.dDgtvriW 37 s++ +spdg ++a+++ dD+ +++W sp|Q8BPN8|DMXL2_MOUSE 169 SVSvhlmeWSPDGEYFATAGkDDCLLKVW 197 23344667*********88757******* PP == domain 2 score: 10.2 bits; conditional E-value: 0.016 EEESS.SSEEEEEEETTSSE..........EEEEETTSEEEEE CS WD40 6 tltGH.ssvtslafspdgaw..........lasGsdDgtvriW 37 ++ +H vt++++ + +++ l+s++ Dg +r+W sp|Q8BPN8|DMXL2_MOUSE 227 VYLAHpRAVTGFSWRKTSKYmprgsvcnvlLTSCH-DGVCRLW 268 56689555999998888888999999998566777.******* PP == domain 3 score: 7.5 bits; conditional E-value: 0.12 SS.SS.....EEEEEEETTSSEEE..EEETTSEEEEEE CS WD40 9 GH.ss.....vtslafspdgawla..sGsdDgtvriWd 38 GH ss v +l ++l+ ++s D++vr+W+ sp|Q8BPN8|DMXL2_MOUSE 999 GHlSSssiypV-CL-----APYLVvtTCS-DNKVRFWK 1029 88844464444.88.....6775434899.*******6 PP == domain 4 score: 1.7 bits; conditional E-value: 8.2 ESSSSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 8 tGHssvtslafspdgawlasGsdDgtvriW 37 t H +v ++ +l +G Dg+vr++ sp|Q8BPN8|DMXL2_MOUSE 2766 TSH-PV-HQ------YYL-TGAQDGSVRMF 2786 445.55.33......355.8********86 PP == domain 5 score: 4.3 bits; conditional E-value: 1.2 ESS.SSEEEEEEETTSSEEEEEE...TTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGs...dDgtvriWd 38 H + +++af +++++a+++ d+++v +Wd sp|Q8BPN8|DMXL2_MOUSE 2845 QCHsKATSDFAFITSSSLVATSGhsnDNRNVCLWD 2879 567444467778888899996543678*******9 PP == domain 6 score: 7.2 bits; conditional E-value: 0.15 EEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGHss.vtslafspdgawlasGsdDgtvriWd 38 +++ +t H++ t l++ p +++l+sG+++g + i+d sp|Q8BPN8|DMXL2_MOUSE 2888 LIHGFTCHDHgATVLQYAPKQQLLISGGRKGYICIFD 2924 57778999445888899******************98 PP == domain 7 score: 17.1 bits; conditional E-value: 0.00011 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 q+++t+ +H s + +la ++ ++++Gs g++++W sp|Q8BPN8|DMXL2_MOUSE 2929 QLIHTFQAHdSAIKALALDSCEEYFTTGSAEGNIKVW 2965 899******777************************* PP == domain 8 score: 6.2 bits; conditional E-value: 0.3 S........EEEEEEETTSSEEEEEETTSEEE CS WD40 12 s........vtslafspdgawlasGsdDgtvr 35 s v +a s+d++++++G Dgt++ sp|Q8BPN8|DMXL2_MOUSE 2984 SifrnigagVMQIAISQDNRLFSCGA-DGTLK 3014 13333334477788*******97666.***97 PP >> sp|Q8BH44|COR2B_MOUSE Coronin-2B OS=Mus musculus OX=10090 GN=Coro2b PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 18.0 0.1 5.7e-05 0.0049 9 37 .. 85 115 .. 78 116 .. 0.77 2 ! 11.4 0.0 0.0067 0.57 5 38 .] 131 166 .. 127 166 .. 0.76 3 ! 16.3 0.0 0.00019 0.016 1 36 [. 170 206 .. 170 208 .. 0.90 Alignments for each domain: == domain 1 score: 18.0 bits; conditional E-value: 5.7e-05 SS.SSEEEEEEETTSSE.EEEEETTSEEEEE CS WD40 9 GH.ssvtslafspdgaw.lasGsdDgtvriW 37 GH ++v +++++p + +as+s+D +vriW sp|Q8BH44|COR2B_MOUSE 85 GHqGNVLDIKWNPFIDNiIASCSEDTSVRIW 115 9*777****6555555556799********* PP == domain 2 score: 11.4 bits; conditional E-value: 0.0067 EEEESSSS.EEEEE.EETTSSEEE.EEETTSEEEEEE CS WD40 5 rtltGHss.vtsla.fspdgawla.sGsdDgtvriWd 38 +l GHs v +l ++p + ++ s+++D +v iW+ sp|Q8BH44|COR2B_MOUSE 131 LELHGHSRrV-GLVeWHPTTNNILfSAGYDYKVLIWN 166 6788994469.555599999996548888*******8 PP == domain 3 score: 16.3 bits; conditional E-value: 0.00019 TEEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEE CS WD40 1 gqclrtltGHss.vtslafspdgawlasGsdDgtvri 36 g++++ ++ H++ + +++f+ dg++l++ ++D+++r+ sp|Q8BH44|COR2B_MOUSE 170 GEPVKMIDCHTDvILCMSFNTDGSLLTTTCKDKKLRV 206 57889999**8856*************9999****98 PP >> sp|Q9WUM3|COR1B_MOUSE Coronin-1B OS=Mus musculus OX=10090 GN=Coro1b PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 23.3 0.2 1.2e-06 9.9e-05 8 37 .. 79 110 .. 73 111 .. 0.86 2 ! 14.4 0.1 0.00079 0.068 3 38 .] 124 161 .. 122 161 .. 0.81 3 ! 14.5 0.4 0.00073 0.063 10 38 .] 175 204 .. 170 204 .. 0.87 Alignments for each domain: == domain 1 score: 23.3 bits; conditional E-value: 1.2e-06 ESS.SSEEEEEEETTSSEE.EEEETTSEEEEE CS WD40 8 tGH.ssvtslafspdgawl.asGsdDgtvriW 37 GH ++v +++++p+++ + asGs+D+tv++W sp|Q9WUM3|COR1B_MOUSE 79 CGHtGPVLDIDWCPHNDEViASGSEDCTVMVW 110 59*888************73699********* PP == domain 2 score: 14.4 bits; conditional E-value: 0.00079 EEEEEESS.SSEEEEEEETTSSEEE..EEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawla..sGsdDgtvriWd 38 ++ +l+GH + v + ++p + ++ +G+ D+ v iW+ sp|Q9WUM3|COR1B_MOUSE 124 PVVVLEGHtKRVGIITWHPTARNVLlsAGC-DNVVLIWN 161 67899***999*777799999995332677.*******8 PP == domain 3 score: 14.5 bits; conditional E-value: 0.00073 SSS..EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 Hss..vtslafspdgawlasGsdDgtvriWd 38 H + ++ ++++++g++++s+++D++vri d sp|Q9WUM3|COR1B_MOUSE 175 H-PdlIYNVSWNHNGSLFCSACKDKSVRIID 204 5.235999********************966 PP >> sp|A2AKB9|DCA10_MOUSE DDB1- and CUL4-associated factor 10 OS=Mus musculus OX=10090 GN=Dcaf10 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 5.0 0.0 0.73 62 8 38 .] 173 203 .. 167 203 .. 0.80 2 ! 16.4 0.1 0.00018 0.015 3 38 .] 209 245 .. 207 245 .. 0.79 3 ! 20.4 0.8 9.6e-06 0.00082 4 38 .] 253 288 .. 250 288 .. 0.90 4 ? 5.1 0.0 0.65 56 13 27 .. 482 496 .. 466 512 .. 0.74 5 ? 5.8 0.1 0.4 34 4 37 .. 528 562 .. 525 563 .. 0.84 Alignments for each domain: == domain 1 score: 5.0 bits; conditional E-value: 0.73 ESSSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGHssvtslafspdgawlasGsdDgtvriWd 38 ++H+ v l +spdg+ l+ +++ v ++d sp|A2AKB9|DCA10_MOUSE 173 RTHGAVFNLEYSPDGSVLTVACEQTEVLLFD 203 68978************98777677777665 PP == domain 2 score: 16.4 bits; conditional E-value: 0.00018 EEEEEE.SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtlt.GH.ssvtslafspdgawlasGsdDgtvriWd 38 +++tl+ +H ++v+ ++f ++ + a++sdD t+ +Wd sp|A2AKB9|DCA10_MOUSE 209 HIKTLSeAHeDCVNNIRFLDNRLF-ATCSDDTTIALWD 245 567776699777888877777666.89**********9 PP == domain 3 score: 20.4 bits; conditional E-value: 9.6e-06 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + tl GH s+v + ++ + ++l++++ Dg+v iWd sp|A2AKB9|DCA10_MOUSE 253 VCTLHGHtSWVKNIEYDTNTRLLVTSGFDGNVIIWD 288 67899**888*************98888*******9 PP == domain 4 score: 5.1 bits; conditional E-value: 0.65 EEEEEEETTSSEEEE CS WD40 13 vtslafspdgawlas 27 + l+fspdg++++s sp|A2AKB9|DCA10_MOUSE 482 IKELCFSPDGRMISS 496 8889********876 PP == domain 5 score: 5.8 bits; conditional E-value: 0.4 EEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGHss.vtslafspdgawlasGsdDgtvriW 37 +r+l H++ v +fsp + +asG+ g v ++ sp|A2AKB9|DCA10_MOUSE 528 IRSLYSHNDvVLTTKFSPTHCQIASGCLSGRVSLY 562 788999*99569999***********988888775 PP >> sp|Q5U4D9|THOC6_MOUSE THO complex subunit 6 homolog OS=Mus musculus OX=10090 GN=Thoc6 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 6.6 0.0 0.22 19 13 36 .. 27 50 .. 18 52 .. 0.82 2 ? 8.7 0.1 0.048 4.1 2 37 .. 67 100 .. 66 100 .. 0.83 3 ! 23.7 0.0 8.6e-07 7.4e-05 4 38 .] 161 196 .. 158 196 .. 0.83 4 ? 5.6 0.3 0.46 40 10 37 .. 218 244 .. 207 245 .. 0.79 Alignments for each domain: == domain 1 score: 6.6 bits; conditional E-value: 0.22 EEEEEEETTSSEEEEEETTSEEEE CS WD40 13 vtslafspdgawlasGsdDgtvri 36 + s+++sp g++la+G g + i sp|Q5U4D9|THOC6_MOUSE 27 IFSQSVSPCGKFLAAGNNYGQIAI 50 88999*********9977877766 PP == domain 2 score: 8.7 bits; conditional E-value: 0.048 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +++ ++ +H ++v+s+ +s d ++l s++ Dg v+ W sp|Q5U4D9|THOC6_MOUSE 67 KPVVVFHAHdGPVYSM-VSTDRHLL-SAG-DGEVKGW 100 6788999**888****.88888887.688.**99977 PP == domain 3 score: 23.7 bits; conditional E-value: 8.6e-07 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +r l+GH + +++la ++ ++sG++Dg vr+Wd sp|Q5U4D9|THOC6_MOUSE 161 TRALRGHtDYIHCLALRERSPEVLSGGEDGAVRLWD 196 6789***555****7666666699***********9 PP == domain 4 score: 5.6 bits; conditional E-value: 0.46 SSS..EEEEEEETTSSEEEEEETTSEEEEE CS WD40 10 Hss..vtslafspdgawlasGsdDgtvriW 37 H++ + +l d++w+++G+ + + +W sp|Q5U4D9|THOC6_MOUSE 218 HNGrwIGCL--ATDSDWMVCGG-GPALTLW 244 644569999..88******999.8877777 PP >> sp|Q9CWU9|NUP37_MOUSE Nucleoporin Nup37 OS=Mus musculus OX=10090 GN=Nup37 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 5.0 0.0 0.74 64 2 37 .. 64 107 .. 63 108 .. 0.76 2 ! 25.1 0.0 3.3e-07 2.8e-05 5 38 .] 118 153 .. 114 153 .. 0.84 3 ? 6.8 0.0 0.2 17 15 38 .] 170 194 .. 156 194 .. 0.82 4 ? 10.4 0.9 0.014 1.2 4 37 .. 282 322 .. 279 323 .. 0.75 Alignments for each domain: == domain 1 score: 5.0 bits; conditional E-value: 0.74 EEEEEEESS.SSEEEEEEETTSSE........EEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw........lasGsdDgtvriW 37 ++lrt+ H v ++a+sp+ ++ ++++ D ++r++ sp|Q9CWU9|NUP37_MOUSE 64 KTLRTF-HHgVRVDGIAWSPETKLdslppvikFCTSAADLKIRLF 107 567777.4744489********99999998876666669888875 PP == domain 2 score: 25.1 bits; conditional E-value: 3.3e-07 EEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 ++l+GH +++++l f+p las sdD+t+riW+ sp|Q9CWU9|NUP37_MOUSE 118 KVLEGHsDFINDLVFHPKEGQeLASVSDDHTCRIWN 153 6899**555*****777777779999*********8 PP == domain 3 score: 6.8 bits; conditional E-value: 0.2 EEEEETTSSE.EEEEETTSEEEEEE CS WD40 15 slafspdgaw.lasGsdDgtvriWd 38 s++++p+ ++ l+ + ++gt+r++d sp|Q9CWU9|NUP37_MOUSE 170 SVCWHPEETFkLMVAEKNGTIRFYD 194 89********8678999******98 PP == domain 4 score: 10.4 bits; conditional E-value: 0.014 EEEEESS.SS..EEEEE......EETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGH.ss..vtsla......fspdgawlasGsdDgtvriW 37 +++l GH ++ + s+a +++ ++ a G+ D+++ +W sp|Q9CWU9|NUP37_MOUSE 282 IHHL-GHsQPvlIGSVAvgsglsWHRTLPLCAVGG-DHKLLFW 322 6777.9966688455554444449999999999**.******* PP >> sp|Q6ZQL4|WDR43_MOUSE WD repeat-containing protein 43 OS=Mus musculus OX=10090 GN=Wdr43 PE=2 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 8.8 0.0 0.045 3.8 17 37 .. 20 41 .. 15 42 .. 0.78 2 ! 22.2 0.6 2.7e-06 0.00023 8 37 .. 123 153 .. 114 154 .. 0.85 3 ! 15.0 0.2 0.00052 0.044 7 37 .. 164 193 .. 158 194 .. 0.84 4 ? 8.6 0.1 0.054 4.6 5 37 .. 202 248 .. 198 249 .. 0.69 Alignments for each domain: == domain 1 score: 8.8 bits; conditional E-value: 0.045 EEETTSSE...EEEEETTSEEEEE CS WD40 17 afspdgaw...lasGsdDgtvriW 37 afspd++ l ++s Dg +r+W sp|Q6ZQL4|WDR43_MOUSE 20 AFSPDSQAyfaL-ASS-DGQLRVW 41 678888887644.689.******* PP == domain 2 score: 22.2 bits; conditional E-value: 2.7e-06 ESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriW 37 GH + v+++++++d++ l s+sdD+ + W sp|Q6ZQL4|WDR43_MOUSE 123 GGHeNRVNCIQWHQDNDCLYSCSDDKYIVEW 153 4**999********************99766 PP == domain 3 score: 15.0 bits; conditional E-value: 0.00052 EESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriW 37 ++G ssv+sl+ spdg++l+s +t+++W sp|Q6ZQL4|WDR43_MOUSE 164 WKGDnSSVSSLCISPDGKMLLS-A-GRTIKLW 193 4577577**************5.7.9****** PP == domain 4 score: 8.6 bits; conditional E-value: 0.054 EEEESS.SSEEEEE........EETTSSE.........EEEE..ETTSEEEEE CS WD40 5 rtltGH.ssvtsla........fspdgaw.........lasG..sdDgtvriW 37 r++tGH ++v+sl+ ++sG + D+ + +W sp|Q6ZQL4|WDR43_MOUSE 202 RHFTGHaTPVSSLRfttirpneS-----QpsdgitglyFLSGavH-DRLLNVW 248 89****99999997666555541.....14444458776788544.9999999 PP >> sp|Q8C0M0|WDR59_MOUSE GATOR complex protein WDR59 OS=Mus musculus OX=10090 GN=Wdr59 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.0 0.2 0.00051 0.044 4 38 .] 98 134 .. 95 134 .. 0.85 2 ! 13.5 0.1 0.0015 0.13 20 38 .] 159 176 .. 143 176 .. 0.84 3 ! 23.1 0.4 1.4e-06 0.00012 8 38 .] 188 220 .. 182 220 .. 0.89 4 ? 9.0 0.1 0.041 3.5 3 37 .. 274 314 .. 272 315 .. 0.74 Alignments for each domain: == domain 1 score: 15.0 bits; conditional E-value: 0.00051 EEEEESSSS.EEEEEEETTSSE.......EEEEETTSEEEEEE CS WD40 4 lrtltGHss.vtslafspdgaw.......lasGsdDgtvriWd 38 +tl GH+ +++l +w l+++s D ++iWd sp|Q8C0M0|WDR59_MOUSE 98 GTTLQGHTRvISDL------DWavfepdlLVTSSVDTYIYIWD 134 57899**7767***......8888888888899*********9 PP == domain 2 score: 13.5 bits; conditional E-value: 0.0015 TTSSEEEEEETTSEEEEEE CS WD40 20 pdgawlasGsdDgtvriWd 38 ++ ++la+++ Dg vriWd sp|Q8C0M0|WDR59_MOUSE 159 KNANYLATSH-DGDVRIWD 176 67889**999.*******9 PP == domain 3 score: 23.1 bits; conditional E-value: 1.4e-06 ESS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawl.asGsdDgtvriWd 38 +H s +++l+++pd+ + a++s D++v++Wd sp|Q8C0M0|WDR59_MOUSE 188 AAHlSKIHGLDWHPDSEHIfATSSQDNSVKFWD 220 589999************846889********9 PP == domain 4 score: 9.0 bits; conditional E-value: 0.041 EEEEEESSSS.EEEEE......EETTSSEEEEE.ETTSEEEEE CS WD40 3 clrtltGHss.vtsla......fspdgawlasG.sdDgtvriW 37 +++t+ GH++ v ++ s+d +++ s+D+t+r+W sp|Q8C0M0|WDR59_MOUSE 274 PVHTFVGHDDvVLEFQwrrqkeGSKDYQLV--TwSRDQTLRMW 314 89******7756888556666666666665..5588******* PP >> sp|Q08274|DMWD_MOUSE Dystrophia myotonica WD repeat-containing protein OS=Mus musculus OX=10090 GN=Dmwd PE=1 SV=3 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 13.1 0.0 0.0019 0.17 13 37 .. 284 308 .. 273 309 .. 0.88 2 ! 20.7 0.2 7.8e-06 0.00067 13 38 .] 326 351 .. 318 351 .. 0.90 3 ? 9.5 0.0 0.028 2.4 8 32 .. 362 390 .. 355 392 .. 0.77 Alignments for each domain: == domain 1 score: 13.1 bits; conditional E-value: 0.0019 EEEEEEETTSSEEEEEETTSEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriW 37 + +afspdg+ la+ s Dg +r++ sp|Q08274|DMWD_MOUSE 284 LNEFAFSPDGRHLACVSQDGCLRVF 308 57789********988*******97 PP == domain 2 score: 20.7 bits; conditional E-value: 7.8e-06 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 ++++spdg+++++G++D v +W+ sp|Q08274|DMWD_MOUSE 326 LLCVCWSPDGRYVVTGGEDDLVTVWS 351 56***********************5 PP == domain 3 score: 9.5 bits; conditional E-value: 0.028 ESS.SSEEEEEEETTSSE...EEEEETTS CS WD40 8 tGH.ssvtslafspdgaw...lasGsdDg 32 GH s+v+++af+p+ + as+s Dg sp|Q08274|DMWD_MOUSE 362 HGHkSWVNAVAFDPYTTRaeeAASASADG 390 488777*********99966657777787 PP >> sp|Q9JM98|WRP73_MOUSE WD repeat-containing protein WRAP73 OS=Mus musculus OX=10090 GN=Wrap73 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 6.3 0.0 0.28 24 17 29 .. 15 27 .. 6 35 .. 0.81 2 ? 2.1 0.0 6.1 5.3e+02 13 37 .. 51 76 .. 39 77 .. 0.71 3 ? 5.0 0.0 0.73 62 1 27 [. 168 195 .. 168 213 .. 0.85 4 ! 19.8 0.0 1.5e-05 0.0013 13 36 .. 226 249 .. 203 251 .. 0.89 5 ? 9.4 0.0 0.03 2.5 9 38 .] 371 401 .. 362 401 .. 0.84 Alignments for each domain: == domain 1 score: 6.3 bits; conditional E-value: 0.28 EEETTSSEEEEEE CS WD40 17 afspdgawlasGs 29 +fspdg++las+ sp|Q9JM98|WRP73_MOUSE 15 RFSPDGKYLASCV 27 49********985 PP == domain 2 score: 2.1 bits; conditional E-value: 6.1 EEEEEEETTSSEEEEEE.TTSEEEEE CS WD40 13 vtslafspdgawlasGs.dDgtvriW 37 + ++ +s d+ ++++++ + g v +W sp|Q9JM98|WRP73_MOUSE 51 IQHIEWSADSLFILCAMyRRGLVQVW 76 66677********9884256666666 PP == domain 3 score: 5.0 bits; conditional E-value: 0.73 TEEEEEEESS.SSEEEEEEETTSSEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgawlas 27 +q+lr++++ ++ t++ + p+g la+ sp|Q9JM98|WRP73_MOUSE 168 WQLLRHFDTDtQDLTGIEWAPNGCVLAA 195 6899999988788***********9953 PP == domain 4 score: 19.8 bits; conditional E-value: 1.5e-05 EEEEEEETTSSEEEEEETTSEEEE CS WD40 13 vtslafspdgawlasGsdDgtvri 36 + s+a+sp++++la Gs+Dg+vr+ sp|Q9JM98|WRP73_MOUSE 226 IKSVAWSPSSQFLAIGSYDGKVRL 249 89*********************7 PP == domain 5 score: 9.4 bits; conditional E-value: 0.03 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 H s+v+s++++p ++ la ++ +v++W+ sp|Q9JM98|WRP73_MOUSE 371 EHmSPVRSFQWDPQQPRLAICTGGSKVYLWS 401 6999**************9885599999995 PP >> sp|Q9WV32|ARC1B_MOUSE Actin-related protein 2/3 complex subunit 1B OS=Mus musculus OX=10090 GN=Arpc1b PE=1 SV=4 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 24.5 0.1 4.9e-07 4.2e-05 1 37 [. 42 79 .. 42 80 .. 0.91 2 ? 2.2 0.0 5.6 4.8e+02 14 33 .. 100 119 .. 92 122 .. 0.82 3 ! 16.8 0.3 0.00013 0.011 12 37 .. 144 169 .. 132 170 .. 0.81 4 ? 6.6 1.3 0.23 20 11 36 .. 203 228 .. 193 230 .. 0.82 5 ? 3.4 0.1 2.3 1.9e+02 21 38 .] 342 358 .. 323 358 .. 0.63 Alignments for each domain: == domain 1 score: 24.5 bits; conditional E-value: 4.9e-07 TEEEEEEESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 1 gqclrtltGHss.vtslafspdgawlasGsdDgtvriW 37 ++++++l+ H++ vt++++ p+++ +++++ D++ ++W sp|Q9WV32|ARC1B_MOUSE 42 WNKVHELKEHNGqVTGIDWAPESNRIVTCGTDRNAYVW 79 6889******555**************9999******* PP == domain 2 score: 2.2 bits; conditional E-value: 5.6 EEEEEETTSSEEEEEETTSE CS WD40 14 tslafspdgawlasGsdDgt 33 +++++ p+ + +a Gs + sp|Q9WV32|ARC1B_MOUSE 100 RCVRWAPNENKFAVGSGSRV 119 69**********99975555 PP == domain 3 score: 16.8 bits; conditional E-value: 0.00013 SEEEEEEETTSSEEEEEETTSEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriW 37 v sl+++p++ +la+Gs D ++ri+ sp|Q9WV32|ARC1B_MOUSE 144 TVLSLDWHPNNVLLAAGSCDFKCRIF 169 289**************99*****97 PP == domain 4 score: 6.6 bits; conditional E-value: 0.23 SSEEEEEEETTSSEEE.EEETTSEEEE CS WD40 11 ssvtslafspdgawla.sGsdDgtvri 36 ++v++++fs +g+ +a ++ D tv + sp|Q9WV32|ARC1B_MOUSE 203 GWVHGVCFSASGSRVAwVSH-DSTVCL 228 349***********988889.***987 PP == domain 5 score: 3.4 bits; conditional E-value: 2.3 TSSEEEEEETTSEEEEEE CS WD40 21 dgawlasGsdDgtvriWd 38 +++ ++G+ Dg iWd sp|Q9WV32|ARC1B_MOUSE 342 CSQFCTTGM-DGGMSIWD 358 344555666.*******9 PP >> sp|Q8C570|RAE1L_MOUSE mRNA export factor OS=Mus musculus OX=10090 GN=Rae1 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.3 0.4 2.4 2.1e+02 22 37 .. 54 69 .. 26 70 .. 0.73 2 ! 20.8 0.2 7.2e-06 0.00062 10 38 .] 85 114 .. 79 114 .. 0.91 3 ! 15.8 0.2 0.00029 0.025 19 38 .] 138 157 .. 119 157 .. 0.72 4 ! 12.0 0.2 0.0046 0.39 6 38 .] 256 301 .. 252 301 .. 0.78 5 ? 2.9 0.0 3.4 2.9e+02 12 31 .. 317 337 .. 306 339 .. 0.80 Alignments for each domain: == domain 1 score: 3.3 bits; conditional E-value: 2.4 SSEEEEEETTSEEEEE CS WD40 22 gawlasGsdDgtvriW 37 g++l++Gs+ + vr W sp|Q8C570|RAE1L_MOUSE 54 GNFLIAGSWANDVRCW 69 667999***9999999 PP == domain 2 score: 20.8 bits; conditional E-value: 7.2e-06 S.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvriWd 38 H ++v ++++s+dg+ ++++s D+t ++Wd sp|Q8C570|RAE1L_MOUSE 85 HtGPVLDVCWSDDGSKVFTASCDKTAKMWD 114 7667*************99988*******9 PP == domain 3 score: 15.8 bits; conditional E-value: 0.00029 ETTSSEEEEEETTSEEEEEE CS WD40 19 spdgawlasGsdDgtvriWd 38 p+ + +++Gs+D+t+++Wd sp|Q8C570|RAE1L_MOUSE 138 APNYSCVMTGSWDKTLKFWD 157 35555599***********9 PP == domain 4 score: 12.0 bits; conditional E-value: 0.0046 EEESS.SS............EEEEEEETTSSEEEE.EETTSEEEEEE CS WD40 6 tltGH.ss............vtslafspdgawlas.GsdDgtvriWd 38 t++ H s+ v+++af+p + la+ Gs Dg +Wd sp|Q8C570|RAE1L_MOUSE 256 TFKCHrSNgtntsapqdiyaVNGIAFHPVHGTLATvGS-DGRFSFWD 301 5666663336667778888899***********96267.*******9 PP == domain 5 score: 2.9 bits; conditional E-value: 3.4 SEEEEEEETTSSEEE.EEETT CS WD40 12 svtslafspdgawla.sGsdD 31 ++ +++f+++g+ +a ++s+D sp|Q8C570|RAE1L_MOUSE 317 PIAACCFNHNGNIFAyASSYD 337 488999*******97777767 PP >> sp|Q8BGF3|WDR92_MOUSE WD repeat-containing protein 92 OS=Mus musculus OX=10090 GN=Wdr92 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 4.2 0.0 1.3 1.1e+02 22 38 .] 80 96 .. 71 96 .. 0.89 2 ! 20.2 0.0 1.1e-05 0.00095 3 38 .] 103 145 .. 101 145 .. 0.73 3 ? 2.9 0.0 3.4 2.9e+02 22 38 .] 180 196 .. 165 196 .. 0.77 4 ? 4.6 0.0 0.99 85 8 38 .] 256 288 .. 247 288 .. 0.73 5 ! 11.0 0.1 0.0091 0.78 11 36 .. 322 348 .. 312 348 .. 0.78 Alignments for each domain: == domain 1 score: 4.2 bits; conditional E-value: 1.3 SSEEEEEETTSEEEEEE CS WD40 22 gawlasGsdDgtvriWd 38 +++la+G+ g+++iW+ sp|Q8BGF3|WDR92_MOUSE 80 QRFLATGDFGGNLHIWN 96 478****99*******8 PP == domain 2 score: 20.2 bits; conditional E-value: 1.1e-05 EEEEEESSSS.EEEEE......EETTSSE.....EEEEETTSEEEEEE CS WD40 3 clrtltGHss.vtsla......fspdgaw.....lasGsdDgtvriWd 38 ++++ +GH+ ++ ++ +++Gs+Dgtv++Wd sp|Q8BGF3|WDR92_MOUSE 103 PVYSVKGHKEiINTIDgvgglgI-----GegapeIVTGSRDGTVKVWD 145 678999**775699955555544.....05555599***********9 PP == domain 3 score: 2.9 bits; conditional E-value: 3.4 SSEEEEEETTSEEEEEE CS WD40 22 gawlasGsdDgtvriWd 38 + +++G d+g ++++d sp|Q8BGF3|WDR92_MOUSE 180 ERVVCAGYDNGDIKLFD 196 455889999******98 PP == domain 4 score: 4.6 bits; conditional E-value: 0.99 ESS.SSEEEEEEETTSSE..EEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgaw..lasGsdDgtvriWd 38 ++H s v+ ++ p ++ l++G+ g++++W+ sp|Q8BGF3|WDR92_MOUSE 256 KAHkSTVWQVRHLPQNREifLTTGG-AGSLHLWK 288 5895558888755555553367999.*******6 PP == domain 5 score: 11.0 bits; conditional E-value: 0.0091 SSEEEEEEETTSSEEEEE.ETTSEEEE CS WD40 11 ssvtslafspdgawlasG.sdDgtvri 36 ++++sl++spd++ l+ + s D+ vr+ sp|Q8BGF3|WDR92_MOUSE 322 QPISSLDWSPDKRGLCVCsSFDQMVRV 348 479***********9755267**9997 PP >> tr|F8VPX2|F8VPX2_MOUSE F-box and WD-40 domain protein 9 OS=Mus musculus OX=10090 GN=Fbxw9 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 13.8 0.0 0.0012 0.1 8 38 .] 170 201 .. 163 201 .. 0.89 2 ! 15.2 2.7 0.00044 0.038 8 38 .] 223 252 .. 214 252 .. 0.80 3 ? 6.9 0.0 0.18 16 5 38 .] 261 292 .. 257 292 .. 0.74 4 ? 7.5 0.1 0.12 10 10 38 .] 306 333 .. 299 333 .. 0.81 5 ? 10.1 0.3 0.017 1.5 2 36 .. 379 413 .. 378 414 .. 0.72 Alignments for each domain: == domain 1 score: 13.8 bits; conditional E-value: 0.0012 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 +GH s+ ++ + ga+ +sGs+D++v +Wd tr|F8VPX2|F8VPX2_MOUSE 170 DGHfASIDAVLLLQGGALCLSGSRDRNVNLWD 201 4998889999999999**99***********9 PP == domain 2 score: 15.2 bits; conditional E-value: 0.00044 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++H ++v+sl + ++sGs+D tv++Wd tr|F8VPX2|F8VPX2_MOUSE 223 STHkGWVWSL--AAQDHRVCSGSWDSTVKLWD 252 5786669999..55555588***********9 PP == domain 3 score: 6.9 bits; conditional E-value: 0.18 EEEESSSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGHssvtslafspdgawlasGsdDgtvriWd 38 ++++G v +l s + l++G++D++v i+d tr|F8VPX2|F8VPX2_MOUSE 261 GEIKGKAAVLCL--SYQPDILVTGTYDKKVTIYD 292 555666558899..55666789**99*****998 PP == domain 4 score: 7.5 bits; conditional E-value: 0.12 S.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvriWd 38 H s v ++ d + ++sGs+D+++ ++d tr|F8VPX2|F8VPX2_MOUSE 306 HsSAVLAV--LADDRHVISGSEDHSLVVFD 333 63346666..88999999********9998 PP == domain 5 score: 10.1 bits; conditional E-value: 0.017 EEEEEEE.SS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 2 qclrtlt.GH.ssvtslafspdgawlasGsdDgtvri 36 q++r+++ GH s +t+++ s l + s D+t+r+ tr|F8VPX2|F8VPX2_MOUSE 379 QLVRSFDvGHqSQITGIKHSLGT--LYTTSTDKTIRV 413 78999977**7779999433333..556666*****8 PP >> sp|Q9R0Q6|ARC1A_MOUSE Actin-related protein 2/3 complex subunit 1A OS=Mus musculus OX=10090 GN=Arpc1a PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.7 0.5 1.9e-06 0.00016 4 38 .] 45 80 .. 42 80 .. 0.88 2 ! 16.1 0.2 0.00022 0.019 12 37 .. 140 169 .. 132 170 .. 0.81 3 ? 9.7 0.7 0.023 2 2 36 .. 193 230 .. 192 232 .. 0.80 4 ? 1.7 0.0 8.2 7e+02 15 33 .. 251 268 .. 238 273 .. 0.76 Alignments for each domain: == domain 1 score: 22.7 bits; conditional E-value: 1.9e-06 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++l+ H +++t++++ p ++ +++++ D++ ++W+ sp|Q9R0Q6|ARC1A_MOUSE 45 AHELKEHnGHITGIDWAPKSDRIVTCGADRNAYVWS 80 5888989666***************999*******5 PP == domain 2 score: 16.1 bits; conditional E-value: 0.00022 S....EEEEEEETTSSEEEEEETTSEEEEE CS WD40 12 s....vtslafspdgawlasGsdDgtvriW 37 + v sl+++p++ +la+Gs D ++r++ sp|Q9R0Q6|ARC1A_MOUSE 140 PirstVLSLDWHPNNVLLAAGSCDFKCRVF 169 3444489**************99*****97 PP == domain 3 score: 9.7 bits; conditional E-value: 0.023 EEEEEEESS.SS..EEEEEEETTSSEEE.EEETTSEEEE CS WD40 2 qclrtltGH.ss..vtslafspdgawla.sGsdDgtvri 36 q++ ++ G ++ v++++fs +g+ la ++ D tv + sp|Q9R0Q6|ARC1A_MOUSE 193 QLMSEFGGSgTGgwVHGVSFSASGNRLAwVSH-DSTVSV 230 67778877753346*************98889.***976 PP == domain 4 score: 1.7 bits; conditional E-value: 8.2 EEEEETTSSEEEEEETTSE CS WD40 15 slafspdgawlasGsdDgt 33 s++f ++++ +a+G+ D+ sp|Q9R0Q6|ARC1A_MOUSE 251 SVSFVSENSVVAAGH-DCC 268 677778888899999.986 PP >> sp|Q8CEC6|PPWD1_MOUSE Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 11.8 0.5 0.0051 0.43 13 38 .] 93 117 .. 85 117 .. 0.75 2 ! 13.9 0.0 0.0011 0.093 3 38 .] 125 161 .. 123 161 .. 0.88 3 ! 15.6 0.0 0.00032 0.028 14 37 .. 284 307 .. 276 308 .. 0.90 Alignments for each domain: == domain 1 score: 11.8 bits; conditional E-value: 0.0051 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 +t++ ++ ++++++s Dg+v++W+ sp|Q8CEC6|PPWD1_MOUSE 93 ITHV-VCTKTDFIITASHDGHVKFWK 117 4555.5556788999999*******6 PP == domain 2 score: 13.9 bits; conditional E-value: 0.0011 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +++++ H + + s+a+s++ga+++s +dD+ +++d sp|Q8CEC6|PPWD1_MOUSE 125 FVKHFRSHlGVIESIAVSSEGALFCSVGDDKAMKVFD 161 5899****6668************98899***99998 PP == domain 3 score: 15.6 bits; conditional E-value: 0.00032 EEEEEETTSSEEEE.EETTSEEEEE CS WD40 14 tslafspdgawlas.GsdDgtvriW 37 ts++fspdg+ +a+ Gs D++vri+ sp|Q8CEC6|PPWD1_MOUSE 284 TSICFSPDGKKIATiGS-DRKVRIF 307 89**********95499.*****97 PP >> tr|Q3UWE6|Q3UWE6_MOUSE MCG14935, isoform CRA_a OS=Mus musculus OX=10090 GN=Wdr20 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.4 0.0 0.00036 0.031 13 38 .] 223 248 .. 210 248 .. 0.85 2 ! 21.9 0.2 3.4e-06 0.00029 13 38 .] 265 290 .. 253 290 .. 0.84 3 ? 2.5 0.0 4.5 3.9e+02 8 24 .. 301 318 .. 294 334 .. 0.71 Alignments for each domain: == domain 1 score: 15.4 bits; conditional E-value: 0.00036 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 + +afspdg++la+ s Dg +r+++ tr|Q3UWE6|Q3UWE6_MOUSE 223 LNEFAFSPDGKFLACVSQDGFLRVFN 248 67789********988********97 PP == domain 2 score: 21.9 bits; conditional E-value: 3.4e-06 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 ++++spdg+++++G++D v +W+ tr|Q3UWE6|Q3UWE6_MOUSE 265 LLCVCWSPDGKYIVTGGEDDLVTVWS 290 67***********************5 PP == domain 3 score: 2.5 bits; conditional E-value: 4.5 ESS.SSEEEEEEETTSSE CS WD40 8 tGH.ssvtslafspdgaw 24 GH s+v+ +af+p+ + tr|Q3UWE6|Q3UWE6_MOUSE 301 HGHkSWVSVVAFDPYTTS 318 477666999999999775 PP >> sp|Q8VD65|PI3R4_MOUSE Phosphoinositide 3-kinase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Pik3r4 PE=1 SV=3 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 23.3 0.1 1.2e-06 0.0001 4 38 .] 986 1021 .. 983 1021 .. 0.91 2 ? 8.6 0.0 0.052 4.5 13 38 .] 1245 1269 .. 1233 1269 .. 0.69 3 ! 17.1 0.1 0.00011 0.0093 9 38 .] 1327 1358 .] 1321 1358 .] 0.87 Alignments for each domain: == domain 1 score: 23.3 bits; conditional E-value: 1.2e-06 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + +l H s v+ +++s+++ ++a++s Dgtv+iW+ sp|Q8VD65|PI3R4_MOUSE 986 VAHLHEHkSAVNRIRVSDEHLLFATCSNDGTVKIWN 1021 678999*666*************************8 PP == domain 2 score: 8.6 bits; conditional E-value: 0.052 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 +++ + + +l++Gs D ++r+Wd sp|Q8VD65|PI3R4_MOUSE 1245 IYCSPADGNPILLTAGS-DMKIRFWD 1269 43333555566678899.*******9 PP == domain 3 score: 17.1 bits; conditional E-value: 0.00011 SS.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtsla.fspdgawlasGsdDgtvriWd 38 GH + +t++a f+ + +++++s+Dg v++W+ sp|Q8VD65|PI3R4_MOUSE 1327 GHhDIITDIAtFQTTQGFIVTASRDGIVKVWK 1358 894448*************************6 PP >> sp|Q99J09|MEP50_MOUSE Methylosome protein 50 OS=Mus musculus OX=10090 GN=Wdr77 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 2.2 0.1 5.6 4.8e+02 13 37 .. 83 106 .. 72 107 .. 0.76 2 ! 16.9 0.8 0.00013 0.011 9 38 .] 123 153 .. 116 153 .. 0.86 3 ! 24.8 0.1 3.9e-07 3.3e-05 4 38 .] 160 196 .. 157 196 .. 0.83 4 ? 4.1 0.1 1.4 1.2e+02 9 34 .. 253 280 .. 245 283 .. 0.79 5 ? 5.0 0.1 0.73 63 8 34 .. 294 322 .. 286 323 .. 0.83 Alignments for each domain: == domain 1 score: 2.2 bits; conditional E-value: 5.6 EEEEEEETTSSEEEEEETTSEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriW 37 v +l + d+ l+ +sd g v +W sp|Q99J09|MEP50_MOUSE 83 VADLTWVGDKGILV-ASDSGAVELW 106 66776666777787.577******* PP == domain 2 score: 16.9 bits; conditional E-value: 0.00013 SSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GHss.vtslafspdgawlasGsdDgtvriWd 38 H++ v+ + + ++g+ +sGs+D+ ++iWd sp|Q99J09|MEP50_MOUSE 123 EHDDiVSTVTVLSSGTQAVSGSKDCCIKIWD 153 48554799999999***99***********9 PP == domain 3 score: 24.8 bits; conditional E-value: 3.9e-07 EEEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 l ++++H + vt++a sp+++ ++ s+s+D + +Wd sp|Q99J09|MEP50_MOUSE 160 LNSYRAHaGQVTCVAASPHKDSVFlSCSEDSRILLWD 196 679****777*****77777775339**********9 PP == domain 4 score: 4.1 bits; conditional E-value: 1.4 SS.SSEEEEEEETTSSEEEEE.ETTSEE CS WD40 9 GH.ssvtslafspdgawlasG.sdDgtv 34 H ++vt l fsp++ l+++ s+D+++ sp|Q99J09|MEP50_MOUSE 253 VHsQGVTRLVFSPHSVPLLTSlSEDCSL 280 69777********999888888888876 PP == domain 5 score: 5.0 bits; conditional E-value: 0.73 ESS.SSEEEEEEETTSSEEEEE.ETTSEE CS WD40 8 tGH.ssvtslafspdgawlasG.sdDgtv 34 ++H ++v++ +sp ++ l++ ++D+ v sp|Q99J09|MEP50_MOUSE 294 RAHrDFVRDATWSPLNHSLLTTvGWDHQV 322 599888****99999999986669**987 PP >> sp|Q8K057|IFT80_MOUSE Intraflagellar transport protein 80 homolog OS=Mus musculus OX=10090 GN=Ift80 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 5.9 0.1 0.39 33 10 38 .] 13 41 .. 5 41 .. 0.82 2 ? 9.4 0.0 0.028 2.4 6 38 .] 101 134 .. 96 134 .. 0.75 3 ? 1.8 0.0 7.6 6.5e+02 10 28 .. 146 166 .. 138 172 .. 0.72 4 ! 11.2 0.4 0.0081 0.7 6 38 .] 183 216 .. 178 216 .. 0.86 5 ! 11.7 0.0 0.0054 0.46 9 29 .. 229 248 .. 220 258 .. 0.80 6 ? 3.0 0.0 3.1 2.6e+02 12 34 .. 271 293 .. 264 295 .. 0.81 Alignments for each domain: == domain 1 score: 5.9 bits; conditional E-value: 0.39 SSS.EEEEEEETTSSE.....EEEEETTSEEEEEE CS WD40 10 Hss.vtslafspdgaw.....lasGsdDgtvriWd 38 H+ v+++ w l s+sdD+ + W+ sp|Q8K057|IFT80_MOUSE 13 HQElVSCV------GWttaeeLYSCSDDHQIVKWN 41 63469999......888888889********9997 PP == domain 2 score: 9.4 bits; conditional E-value: 0.028 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + ++H + v + +++ +g+ l++ ++Dg v+iW+ sp|Q8K057|IFT80_MOUSE 101 SVEAHcGAVLAGRWNYEGTALVTVGEDGQVKIWS 134 55666444666668888899999999*******5 PP == domain 3 score: 1.8 bits; conditional E-value: 7.6 S.SSEEEEEEETTSSEEE.EE CS WD40 10 H.ssvtslafspdgawla.sG 28 + ++v+s+a+ pd+ ++ ++ sp|Q8K057|IFT80_MOUSE 146 QgTPVYSVAWGPDSEKVLyTA 166 3457*********98864455 PP == domain 4 score: 11.2 bits; conditional E-value: 0.0081 EEESSSS.EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGHss.vtslafspdgawlasGsdDgtvriWd 38 +++H++ + +++++ +++++s+++D++ ++Wd sp|Q8K057|IFT80_MOUSE 183 QWKAHDGiILKVDWNSVNDLILSAGEDCKYKVWD 216 4679955479**99999****************9 PP == domain 5 score: 11.7 bits; conditional E-value: 0.0054 SSSSEEEEEEETTSSEEEEEE CS WD40 9 GHssvtslafspdgawlasGs 29 H ++ts+a+ pdg ++a Gs sp|Q8K057|IFT80_MOUSE 229 EH-PITSVAWAPDGELFAVGS 248 35.7**************998 PP == domain 6 score: 3.0 bits; conditional E-value: 3.1 SEEEEEEETTSSEEE.EEETTSEE CS WD40 12 svtslafspdgawla.sGsdDgtv 34 s+ +a+s dg+ +a +++ +g+v sp|Q8K057|IFT80_MOUSE 271 SIFNIAWSIDGTQIAgACG-NGHV 293 488999********96667.9998 PP >> sp|Q91V09|WDR13_MOUSE WD repeat-containing protein 13 OS=Mus musculus OX=10090 GN=Wdr13 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 4.4 0.1 1.1 96 5 35 .. 165 198 .. 163 199 .. 0.72 2 ! 19.9 0.3 1.4e-05 0.0012 3 37 .. 209 244 .. 207 244 .. 0.93 3 ? 4.6 0.0 0.93 80 10 38 .] 406 437 .. 394 437 .. 0.75 4 ! 14.1 0.0 0.001 0.086 5 37 .. 447 480 .. 444 481 .. 0.89 Alignments for each domain: == domain 1 score: 4.4 bits; conditional E-value: 1.1 EEEESS.SS.EEEEEEETTSSE.EEEEETTSEEE CS WD40 5 rtltGH.ss.vtslafspdgaw.lasGsdDgtvr 35 ++++ H + v ++f d + la++s Dg++ sp|Q91V09|WDR13_MOUSE 165 HVFDQHvDEaVPRVRFANDDRHrLACCSLDGSIS 198 667778533566777777777778999*****96 PP == domain 2 score: 19.9 bits; conditional E-value: 1.4e-05 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 l++l+GH +v+++a+s +++ l+s s D t riW sp|Q91V09|WDR13_MOUSE 209 VLHVLRGHtRGVSDFAWSLSNDILVSTSLDATMRIW 244 589*****766**************999******** PP == domain 3 score: 4.6 bits; conditional E-value: 0.93 SSSEEEEE....EETTSSEEEEEETTSEEEEEE CS WD40 10 Hssvtsla....fspdgawlasGsdDgtvriWd 38 H +v+s+ + ga +++Gs+D v+++d sp|Q91V09|WDR13_MOUSE 406 H-PVRSIFcplmSFRQGACVVTGSEDMCVHFFD 437 5.5666655555666778899********9987 PP == domain 4 score: 14.1 bits; conditional E-value: 0.001 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +l GH +v +++f+ d ++las++ g v +W sp|Q91V09|WDR13_MOUSE 447 NKLQGHsAPVLDVSFNCDESLLASSDASGMVIVW 480 5689**777**************9988******* PP >> sp|Q9JMJ2|FBXW4_MOUSE F-box/WD repeat-containing protein 4 OS=Mus musculus OX=10090 GN=Fbxw4 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 11.2 0.4 0.0078 0.67 2 34 .. 152 183 .. 151 186 .. 0.83 2 ! 18.0 0.1 5.7e-05 0.0048 6 37 .. 195 225 .. 190 225 .. 0.86 3 ? 7.5 2.4 0.12 9.9 17 38 .] 276 318 .. 233 318 .. 0.57 4 ! 11.1 0.0 0.0086 0.74 10 38 .] 334 363 .. 324 363 .. 0.68 Alignments for each domain: == domain 1 score: 11.2 bits; conditional E-value: 0.0078 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtv 34 ++ r+++GH +v+++ + +++ +++G+ Dg++ sp|Q9JMJ2|FBXW4_MOUSE 152 RPFRVFSGHdEDVCHF-VLANSHIVSAGG-DGKI 183 6899*****888*777.888888899999.*998 PP == domain 2 score: 18.0 bits; conditional E-value: 5.7e-05 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriW 37 ++++H + v+++ + g ++sGs+D+t ++W sp|Q9JMJ2|FBXW4_MOUSE 195 KYSAHeQEVNCV--DCKGGIIVSGSRDRTAKVW 225 589**888****..66667799*********** PP == domain 3 score: 7.5 bits; conditional E-value: 0.12 E...........EETTSSE...............EEEEETTSEEEEEE CS WD40 17 a...........fspdgaw...............lasGsdDgtvriWd 38 f l+s+++D vr Wd sp|Q9JMJ2|FBXW4_MOUSE 276 NsgqlithlgsdF-----PpgagvldvmyespstLLSCGYDTYVRYWD 318 3333333333331.....0333334444444444456777*******9 PP == domain 4 score: 11.1 bits; conditional E-value: 0.0086 S.SSEEEEEEETTSSEE.EEE.ETTSEEEEEE CS WD40 10 H.ssvtslafspdgawl.asG.sdDgtvriWd 38 H s ++l + dg+ l a+G s+ g vr+Wd sp|Q9JMJ2|FBXW4_MOUSE 334 HdSTFYCL--QTDGNHLlATGsSYYGLVRLWD 363 64446788..66777752689568*******9 PP >> sp|Q7TMQ7|WDR91_MOUSE WD repeat-containing protein 91 OS=Mus musculus OX=10090 GN=Wdr91 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.8 0.2 0.022 1.9 7 38 .] 405 437 .. 399 437 .. 0.85 2 ! 18.0 0.0 5.8e-05 0.005 13 38 .] 566 591 .. 553 591 .. 0.87 3 ? 6.4 0.0 0.27 23 3 38 .] 597 633 .. 595 633 .. 0.84 4 ? 7.9 0.1 0.085 7.3 5 36 .. 706 740 .. 702 740 .. 0.74 Alignments for each domain: == domain 1 score: 9.8 bits; conditional E-value: 0.022 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + H ss+ +++++ +g+ +as + Dg +++W+ sp|Q7TMQ7|WDR91_MOUSE 405 YGEHhSSIMHCRVDCSGRRVASLDVDGVIKVWS 437 6677799************975478*******5 PP == domain 2 score: 18.0 bits; conditional E-value: 5.8e-05 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 +++ af+++g++l++G Dg +r++d sp|Q7TMQ7|WDR91_MOUSE 566 INCTAFNHNGNLLVTGAADGVIRLFD 591 89**************99******98 PP == domain 3 score: 6.4 bits; conditional E-value: 0.27 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 c ++++H + v+s+ fs d + + s ++D++ W+ sp|Q7TMQ7|WDR91_MOUSE 597 CAMSWKAHcGEVYSVEFSCDENAVYSIGEDRKFIQWN 633 778899**666***********9985466*9999997 PP == domain 4 score: 7.9 bits; conditional E-value: 0.085 EEEESS.SSEEEEEEETTSSE.........EEEEETTSEEEE CS WD40 5 rtltGH.ssvtslafspdgaw.........lasGsdDgtvri 36 +l GH +v + +w l ++s+Dg++++ sp|Q7TMQ7|WDR91_MOUSE 706 LSLGGHrAPVVTV------DWstamdcgtcL-TASMDGKIKL 740 5789**99999**......665555558845.6778****97 PP >> sp|Q99LL5|PWP1_MOUSE Periodic tryptophan protein 1 homolog OS=Mus musculus OX=10090 GN=Pwp1 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.1 0.3 0.00046 0.039 7 38 .] 251 284 .. 245 284 .. 0.74 2 ! 13.0 0.0 0.0022 0.19 2 38 .] 289 327 .. 288 327 .. 0.86 3 ? 1.4 0.1 9.9 8.5e+02 6 34 .. 339 366 .. 334 367 .. 0.69 4 ! 16.4 0.1 0.00018 0.015 2 38 .] 375 413 .. 374 413 .. 0.75 Alignments for each domain: == domain 1 score: 15.1 bits; conditional E-value: 0.00046 EESS.SSEEEEEEETTSSE.......EEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgaw.......lasGsdDgtvriWd 38 +GH + v +l +w las+s D tv +Wd sp|Q99LL5|PWP1_MOUSE 251 AEGHtDAVLDL------SWnktvrnvLASASADSTVVLWD 284 579*6669999......555555556678899*******9 PP == domain 2 score: 13.0 bits; conditional E-value: 0.0022 EEEEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 + + lt+H + v l+f+p a l+sGs+D++v ++d sp|Q99LL5|PWP1_MOUSE 289 KSVARLTAHtDKVQTLQFHPFEAQtLISGSYDKSVALYD 327 5677899**555*****9999999999********9998 PP == domain 3 score: 1.4 bits; conditional E-value: 9.9 EEESSSSEEEEEEETTSSE.EEEEETTSEE CS WD40 6 tltGHssvtslafspdgaw.lasGsdDgtv 34 ++G+ + + +++ ++ +++++dDg v sp|Q99LL5|PWP1_MOUSE 339 RFSGQ--IERVTWNHFSPChFLASTDDGFV 366 56777..88997777777743467889976 PP == domain 4 score: 16.4 bits; conditional E-value: 0.00018 EEEEEEESSSS.EEEEEEETTSSE.......EEEEETTSEEEEEE CS WD40 2 qclrtltGHss.vtslafspdgaw.......lasGsdDgtvriWd 38 +++ tl +H++ +++l+ + l+++s D+ v+iWd sp|Q99LL5|PWP1_MOUSE 375 KPIFTLNAHNDeISGLD------LssqikgcLVTASADKFVKIWD 413 678999***66698884......33333444788999*******9 PP >> sp|D3YYM4|WDR72_MOUSE WD repeat-containing protein 72 OS=Mus musculus OX=10090 GN=Wdr72 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 6.0 0.0 0.34 29 10 38 .] 18 45 .. 13 45 .. 0.92 2 ? 7.7 0.0 0.11 9 9 38 .] 60 93 .. 54 93 .. 0.85 3 ? 4.6 0.1 0.98 84 12 36 .. 411 441 .. 397 442 .. 0.70 4 ? 9.4 0.4 0.029 2.5 5 38 .] 465 506 .. 462 506 .. 0.84 5 ! 11.5 0.0 0.0066 0.56 8 37 .. 565 595 .. 558 596 .. 0.85 Alignments for each domain: == domain 1 score: 6.0 bits; conditional E-value: 0.34 SSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 HssvtslafspdgawlasGsdDgtvriWd 38 H s+t++ +d++ +++Gs g + +W+ sp|D3YYM4|WDR72_MOUSE 18 H-SITAIMITDDQQTIVTGSQEGQLCLWS 45 6.79999999******************5 PP == domain 2 score: 7.7 bits; conditional E-value: 0.11 SS.SSEEEEE...EETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtsla...fspdgawlasGsdDgtvriWd 38 GH svt+la + +++++s+ ++g +W+ sp|D3YYM4|WDR72_MOUSE 60 GHsASVTCLArarDFSKQPYVVSAAENGEMCMWN 93 9*777********7777788889999*****998 PP == domain 3 score: 4.6 bits; conditional E-value: 0.98 S......EEEEEEETTSSEEEEEETTSEEEE CS WD40 12 s......vtslafspdgawlasGsdDgtvri 36 +ts + p+ + l++G++Dgt+ i sp|D3YYM4|WDR72_MOUSE 411 EvgmtatITSSEYIPNLDKLICGCEDGTIFI 441 25555556666688888999********976 PP == domain 4 score: 9.4 bits; conditional E-value: 0.029 EE.EESS.SSEEEEE......EETTSSEEEEEETTSEEEEEE CS WD40 5 rt.ltGH.ssvtsla......fspdgawlasGsdDgtvriWd 38 +t l+GH +svtsl d++w++sG++ v +Wd sp|D3YYM4|WDR72_MOUSE 465 HTlLRGHhQSVTSLLyphnlaSKLDQSWMVSGDRGSYVILWD 506 55379**999**9988888888889999****99*******9 PP == domain 5 score: 11.5 bits; conditional E-value: 0.0066 ESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriW 37 + H ++v+ ++++p ++l+ G+ D +v+iW sp|D3YYM4|WDR72_MOUSE 565 RKHlFPVRMIRWHPVENFLIVGCTDDSVYIW 595 56888899999*********9*99******* PP >> sp|Q5ND34|WDR81_MOUSE WD repeat-containing protein 81 OS=Mus musculus OX=10090 GN=Wdr81 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 24.5 0.0 5.1e-07 4.4e-05 4 37 .. 1634 1668 .. 1632 1668 .. 0.93 2 ? 3.1 0.0 3 2.6e+02 23 38 .] 1703 1716 .. 1684 1716 .. 0.78 3 ? 3.6 0.0 2.1 1.8e+02 9 29 .. 1775 1798 .. 1766 1805 .. 0.75 4 ? 5.8 0.2 0.41 35 7 38 .] 1817 1848 .. 1811 1848 .. 0.74 Alignments for each domain: == domain 1 score: 24.5 bits; conditional E-value: 5.1e-07 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 l+++ GH + v ++a ++ ++++sGs+D+tvr+W sp|Q5ND34|WDR81_MOUSE 1634 LQSFPGHtGAVKCVAALSSEDFFLSGSKDRTVRLW 1668 6899***777************************* PP == domain 2 score: 3.1 bits; conditional E-value: 3 SEEEEEETTSEEEEEE CS WD40 23 awlasGsdDgtvriWd 38 ++++ ++ Dg v++Wd sp|Q5ND34|WDR81_MOUSE 1703 QYVV-SC-DGAVHVWD 1716 5677.56.*******9 PP == domain 3 score: 3.6 bits; conditional E-value: 2.1 SS.SS..EEEEEEETTSSEEEEEE CS WD40 9 GH.ss..vtslafspdgawlasGs 29 G ++ v+sla+sp+g+ +++G sp|Q5ND34|WDR81_MOUSE 1775 GGlNPglVRSLAVSPSGRSVVAGF 1798 44556779************9993 PP == domain 4 score: 5.8 bits; conditional E-value: 0.41 EESS.SS...EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ss...vtslafspdgawlasGsdDgtvriWd 38 + +H ++ + ++ +g+ l+s+s D+++ +W+ sp|Q5ND34|WDR81_MOUSE 1817 WPAHeGDilqIKAV----EGSVLISSSSDHSLTVWK 1848 55786666666777....7778988877*******6 PP >> sp|Q9D0R9|WDR89_MOUSE WD repeat-containing protein 89 OS=Mus musculus OX=10090 GN=Wdr89 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 2.7 0.0 3.9 3.3e+02 28 38 .] 47 56 .. 31 56 .. 0.80 2 ! 13.6 0.2 0.0014 0.12 4 38 .] 63 98 .. 60 98 .. 0.76 3 ! 18.6 0.0 3.6e-05 0.0031 3 38 .] 160 198 .. 158 198 .. 0.82 4 ! 15.1 0.3 0.00047 0.04 7 38 .] 315 348 .. 308 348 .. 0.84 Alignments for each domain: == domain 1 score: 2.7 bits; conditional E-value: 3.9 EETTSEEEEEE CS WD40 28 GsdDgtvriWd 38 +s +g++ri+d sp|Q9D0R9|WDR89_MOUSE 47 CS-NGSIRIYD 56 89.*******8 PP == domain 2 score: 13.6 bits; conditional E-value: 0.0014 EEEEESSSS..EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGHss..vtslafspdgawlasGsdDgtvriWd 38 lr++ G + ++++f + + + s+s Dgtv+ Wd sp|Q9D0R9|WDR89_MOUSE 63 LREFGGS-PglLSGVSFANSCDSVYSASTDGTVKCWD 98 6677777.334678888888888889999*******9 PP == domain 3 score: 18.6 bits; conditional E-value: 3.6e-05 EEEEEE.SS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 3 clrtlt.GH.ssvtslafspdgawla.sGsdDgtvriWd 38 +l+ ++ +H +++t ++f+p+++ l+ sGs Dg v ++d sp|Q9D0R9|WDR89_MOUSE 160 PLGAYSeTHsDDITQVRFHPSNPNLVvSGSTDGLVNVFD 198 566665589666************8659999****9998 PP == domain 4 score: 15.1 bits; conditional E-value: 0.00047 EE.SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 lt.GH.ssvtslafspdgawlasGsdDgtvriWd 38 l GH v+s++++ + + l++G++D + +W+ sp|Q9D0R9|WDR89_MOUSE 315 LHgGHaATVRSFCWNVSEDSLLTGGEDAQLLLWK 348 33499777*************************6 PP >> sp|Q9WUQ2|PREB_MOUSE Prolactin regulatory element-binding protein OS=Mus musculus OX=10090 GN=Preb PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 21.7 0.0 3.7e-06 0.00032 16 38 .] 160 182 .. 146 182 .. 0.91 2 ? 9.3 0.0 0.031 2.7 3 37 .. 188 222 .. 186 223 .. 0.88 3 ? 6.3 0.1 0.28 24 8 28 .. 297 322 .. 291 326 .. 0.71 Alignments for each domain: == domain 1 score: 21.7 bits; conditional E-value: 3.7e-06 EEEETTSSEEEEEETTSEEEEEE CS WD40 16 lafspdgawlasGsdDgtvriWd 38 ++f++d+++la+G+ Dg+vr+W+ sp|Q9WUQ2|PREB_MOUSE 160 VCFNHDNTLLATGGTDGHVRVWK 182 679**********99*******6 PP == domain 2 score: 9.3 bits; conditional E-value: 0.031 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 ++ ++++H + + +l pdg+++ + ++D + +W sp|Q9WUQ2|PREB_MOUSE 188 KVLEFKAHeGEIGDLTLGPDGKLV-TVGWDFKASVW 222 56789***877************7.68****99999 PP == domain 3 score: 6.3 bits; conditional E-value: 0.28 E.SSSS.EEEEEEETTSSEE....EEE CS WD40 8 t.GHss.vtslafspdgawl....asG 28 + GH +++l++s++g++l ++G sp|Q9WUQ2|PREB_MOUSE 297 ScGH-EvISCLSVSDSGTFLglgtVTG 322 2399.647***********74344455 PP >> sp|Q9D5R2|WDR20_MOUSE WD repeat-containing protein 20 OS=Mus musculus OX=10090 GN=Wdr20 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 1.5 0.0 9 7.7e+02 12 25 .. 151 164 .. 146 177 .. 0.73 2 ! 15.5 0.0 0.00036 0.031 13 38 .] 221 246 .. 202 246 .. 0.86 3 ! 21.8 0.1 3.5e-06 0.0003 13 38 .] 263 288 .. 250 288 .. 0.84 4 ? 2.0 0.0 6.7 5.7e+02 8 22 .. 299 314 .. 292 317 .. 0.79 Alignments for each domain: == domain 1 score: 1.5 bits; conditional E-value: 9 SEEEEEEETTSSEE CS WD40 12 svtslafspdgawl 25 vt++++ p ++ l sp|Q9D5R2|WDR20_MOUSE 151 RVTCVKWVPGSDSL 164 39***988888774 PP == domain 2 score: 15.5 bits; conditional E-value: 0.00036 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 + +afspdg++la+ s Dg +r+++ sp|Q9D5R2|WDR20_MOUSE 221 LNEFAFSPDGKFLACVSQDGFLRVFN 246 57789********988********97 PP == domain 3 score: 21.8 bits; conditional E-value: 3.5e-06 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 +l++spdg+++++G++D v +W+ sp|Q9D5R2|WDR20_MOUSE 263 LLCLCWSPDGKYIVTGGEDDLVTVWS 288 67***********************5 PP == domain 4 score: 2.0 bits; conditional E-value: 6.7 ESS.SSEEEEEEETTS CS WD40 8 tGH.ssvtslafspdg 22 +GH s+v+ +af+p+ sp|Q9D5R2|WDR20_MOUSE 299 RGHkSWVSVVAFDPYT 314 7**777*999999986 PP >> sp|Q921E6|EED_MOUSE Polycomb protein EED OS=Mus musculus OX=10090 GN=Eed PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 26.0 0.0 1.7e-07 1.5e-05 2 38 .] 181 219 .. 180 219 .. 0.89 2 ! 12.3 0.0 0.0035 0.3 8 37 .. 233 263 .. 225 264 .. 0.76 3 ? 7.1 1.0 0.15 13 5 38 .] 402 438 .. 399 438 .. 0.82 Alignments for each domain: == domain 1 score: 26.0 bits; conditional E-value: 1.7e-07 EEEEEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 qc++++ GH + ++ l+f+p + l+ s s+D+ +r+W+ sp|Q921E6|EED_MOUSE 181 QCIKHYVGHgNAINELKFHPRDPNLLlSVSKDHALRLWN 219 8********999*****888888864499*********8 PP == domain 2 score: 12.3 bits; conditional E-value: 0.0035 ESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriW 37 +GH + v s +++ g ++s+++D+++++W sp|Q921E6|EED_MOUSE 233 EGHrDEVLSADYDLLGEKIMSCGMDHSLKLW 263 699777999955445555899999******* PP == domain 3 score: 7.1 bits; conditional E-value: 0.15 EEEESS.SS..EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ss..vtslafspdgawlasGsdDgtvriWd 38 +tlt H ++ ++ +fs+d++ l++ +dD ++ Wd sp|Q921E6|EED_MOUSE 402 TTLTHHkCGaaIRQTSFSRDSSILIAVCDDASIWRWD 438 5788885448899999*******998888*9998887 PP >> sp|Q8VCG3|WDR74_MOUSE WD repeat-containing protein 74 OS=Mus musculus OX=10090 GN=Wdr74 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 7.1 0.0 0.16 14 12 38 .] 41 71 .. 29 71 .. 0.72 2 ? 2.5 0.1 4.3 3.7e+02 21 37 .. 97 112 .. 88 113 .. 0.84 3 ? 6.8 0.0 0.2 17 13 38 .] 133 159 .. 122 159 .. 0.76 4 ? 5.8 0.1 0.42 36 13 38 .] 184 211 .. 175 211 .. 0.83 5 ! 13.5 0.0 0.0015 0.13 6 36 .. 264 295 .. 259 297 .. 0.81 Alignments for each domain: == domain 1 score: 7.1 bits; conditional E-value: 0.16 S...EEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 12 s...vtslafspdgaw.lasGsdDgtvriWd 38 v++l++ g ++ G+ D+tvr ++ sp|Q8VCG3|WDR74_MOUSE 41 ReeaVNALCWGTGGETqILVGCADRTVRYFN 71 14559999888888888556988****9765 PP == domain 2 score: 2.5 bits; conditional E-value: 4.3 TSSEEEEEETTSEEEEE CS WD40 21 dgawlasGsdDgtvriW 37 dg+++ ++ d g +r+W sp|Q8VCG3|WDR74_MOUSE 97 DGTLI-TCVDSGILRVW 112 77886.6888******* PP == domain 3 score: 6.8 bits; conditional E-value: 0.2 EEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 13 vtslafspdgaw.lasGsdDgtvriWd 38 v+ ++ +p ++ +a++++ + +++Wd sp|Q8VCG3|WDR74_MOUSE 133 VCRMRQDPTHTHvVATCGKENALKVWD 159 56666667777725799*********9 PP == domain 4 score: 5.8 bits; conditional E-value: 0.42 EEEEE..EETTSSEEEEEETTSEEEEEE CS WD40 13 vtsla..fspdgawlasGsdDgtvriWd 38 +++++ f p ++ l++++ + vr++d sp|Q8VCG3|WDR74_MOUSE 184 IWDQDtqFLPGSQKLVTCTGYHQVRVYD 211 67777778888999999966******98 PP == domain 5 score: 13.5 bits; conditional E-value: 0.0015 EEESS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvri 36 l+G +sv++l+ +p++++las++ D+ +ri sp|Q8VCG3|WDR74_MOUSE 264 CLKGLaGSVRGLQCHPSKPLLASCGLDRVLRI 295 45544445***********************9 PP >> sp|Q8BX09|RBBP5_MOUSE Retinoblastoma-binding protein 5 OS=Mus musculus OX=10090 GN=Rbbp5 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.5 0.4 0.013 1.1 18 38 .] 32 52 .. 17 52 .. 0.80 2 ! 21.2 2.0 5.4e-06 0.00047 6 38 .] 61 94 .. 58 94 .. 0.92 3 ? 3.3 0.0 2.5 2.1e+02 8 38 .] 193 226 .. 184 226 .. 0.71 4 ? 9.6 0.0 0.026 2.2 16 37 .. 257 279 .. 248 280 .. 0.89 5 ? 3.3 0.1 2.5 2.1e+02 2 37 .. 285 321 .. 284 321 .. 0.81 Alignments for each domain: == domain 1 score: 10.5 bits; conditional E-value: 0.013 EETTSSEEEEEETTSEEEEEE CS WD40 18 fspdgawlasGsdDgtvriWd 38 f++ g++la G+ Dg + iWd sp|Q8BX09|RBBP5_MOUSE 32 FNRWGTLLAVGCNDGRIVIWD 52 8888899*************9 PP == domain 2 score: 21.2 bits; conditional E-value: 5.4e-06 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++++H +v+sl++s+dg+ l+s+s D+ v Wd sp|Q8BX09|RBBP5_MOUSE 61 IISAHiHPVCSLCWSRDGHKLVSASTDNIVSQWD 94 56799889****************99*******9 PP == domain 3 score: 3.3 bits; conditional E-value: 2.5 ESS.SS..EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ss..vtslafspdgawlasGsdDgtvriWd 38 tG + + s+ f + g+ ++ + D+ +r++d sp|Q8BX09|RBBP5_MOUSE 193 TGTsNTtaIKSIEFARKGSCFLINTADRIIRVYD 226 45532256889988888888765555******98 PP == domain 4 score: 9.6 bits; conditional E-value: 0.026 EEEETTSSEEEEEE.TTSEEEEE CS WD40 16 lafspdgawlasGs.dDgtvriW 37 ++fs dg ++++Gs + + ++iW sp|Q8BX09|RBBP5_MOUSE 257 CCFSGDGEYIVAGSaRQHALYIW 279 78***********857******* PP == domain 5 score: 3.3 bits; conditional E-value: 2.5 EEEEEEESS.SS.EEEEEEETTSSEEEEE.ETTSEEEEE CS WD40 2 qclrtltGH.ss.vtslafspdgawlasG.sdDgtvriW 37 +++++l G + ++a++p + +a + s g v iW sp|Q8BX09|RBBP5_MOUSE 285 NLVKILHGTrGElLLDVAWHPVRPIIA-SiS-SGVVSIW 321 678888888666668**********97.559.9999999 PP >> sp|E9PYY5|WDR78_MOUSE WD repeat-containing protein 78 OS=Mus musculus OX=10090 GN=Wdr78 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.3 0.0 0.032 2.7 12 38 .] 497 524 .. 486 524 .. 0.76 2 ! 14.6 0.1 0.00066 0.056 2 37 .. 654 691 .. 653 692 .. 0.78 3 ! 11.3 0.0 0.0074 0.64 13 38 .] 709 734 .. 697 734 .. 0.87 Alignments for each domain: == domain 1 score: 9.3 bits; conditional E-value: 0.032 SEEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 12 svtslafspdgawl.asGsdDgtvriWd 38 +vts++fs +++ l a G +gtv i++ sp|E9PYY5|WDR78_MOUSE 497 GVTSVDFSNSSPNLlAVGYHNGTVAIYN 524 4*****99999997257867****9997 PP == domain 2 score: 14.6 bits; conditional E-value: 0.00066 EEEEEEESS.SSEEEEEEETTSSE.......EEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw.......lasGsdDgtvriW 37 q l t++GH ++v+ + w ++s+s D v+iW sp|E9PYY5|WDR78_MOUSE 654 QYLETYRGHkGPVYKVT------WnpfcpdvFLSCSADWGVMIW 691 67889****777****5......55555555569999******* PP == domain 3 score: 11.3 bits; conditional E-value: 0.0074 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 v+++++sp +a+++++ + v iWd sp|E9PYY5|WDR78_MOUSE 709 VYDVSWSPKSAYIFAAANENRVEIWD 734 79***********98988*******9 PP >> sp|Q6ZWR4|2ABB_MOUSE Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Mus musculu # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 6.6 0.0 0.23 20 9 37 .. 17 51 .. 11 52 .. 0.76 2 ? 7.0 0.0 0.17 14 24 38 .] 103 119 .. 70 119 .. 0.67 3 ? 5.5 0.0 0.49 42 9 38 .] 171 200 .. 163 200 .. 0.71 4 ? 4.0 0.0 1.5 1.3e+02 19 36 .. 233 249 .. 211 251 .. 0.77 5 ? 10.2 0.1 0.016 1.4 11 38 .] 282 308 .. 273 308 .. 0.89 Alignments for each domain: == domain 1 score: 6.6 bits; conditional E-value: 0.23 SSSS......EEEEEEETTSSEEEEEETTSEEEEE CS WD40 9 GHss......vtslafspdgawlasGsdDgtvriW 37 Hs ++ + f++ g +la+G++ g v i+ sp|Q6ZWR4|2ABB_MOUSE 17 DHSYateadiISTVEFNHTGELLATGDKGGRVVIF 51 5622345566799*************988888875 PP == domain 2 score: 7.0 bits; conditional E-value: 0.17 E...EEEEETTSEEEEEE CS WD40 24 w...lasGsdDgtvriWd 38 l+s D+tv++W+ sp|Q6ZWR4|2ABB_MOUSE 103 AayfLLSTN-DKTVKLWK 119 344567666.*******6 PP == domain 3 score: 5.5 bits; conditional E-value: 0.49 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 +H +++s+++++d +s++ D + +W+ sp|Q6ZWR4|2ABB_MOUSE 171 AHtYHINSISVNSDYETYMSAD-DLRINLWN 200 67445****9555555545777.*******8 PP == domain 4 score: 4.0 bits; conditional E-value: 1.5 ETTSSEEEEEETTSEEEE CS WD40 19 spdgawlasGsdDgtvri 36 ++ ++++ s+s +gt+r+ sp|Q6ZWR4|2ABB_MOUSE 233 HHCNTFVYSSS-KGTIRL 249 44556699999.*****8 PP == domain 5 score: 10.2 bits; conditional E-value: 0.016 SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriWd 38 ss+++++fs++g+++++ d tv++Wd sp|Q6ZWR4|2ABB_MOUSE 282 SSISDVKFSHSGRYIMT-RDYLTVKVWD 308 46999***********6.99*******9 PP >> tr|A0A1B0GS18|A0A1B0GS18_MOUSE Predicted gene 45736 OS=Mus musculus OX=10090 GN=Gm45736 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 6.9 0.0 0.19 16 12 38 .] 41 71 .. 29 71 .. 0.72 2 ? 2.4 0.1 4.9 4.2e+02 21 37 .. 97 112 .. 88 113 .. 0.84 3 ? 6.6 0.0 0.23 20 13 38 .] 133 159 .. 122 159 .. 0.76 4 ? 5.6 0.1 0.48 41 13 38 .] 184 211 .. 175 211 .. 0.83 5 ! 13.3 0.0 0.0018 0.15 6 36 .. 264 295 .. 259 297 .. 0.81 Alignments for each domain: == domain 1 score: 6.9 bits; conditional E-value: 0.19 S...EEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 12 s...vtslafspdgaw.lasGsdDgtvriWd 38 v++l++ g ++ G+ D+tvr ++ tr|A0A1B0GS18|A0A1B0GS18_MOUSE 41 ReeaVNALCWGTGGETqILVGCADRTVRYFN 71 14559999888888888556988****9765 PP == domain 2 score: 2.4 bits; conditional E-value: 4.9 TSSEEEEEETTSEEEEE CS WD40 21 dgawlasGsdDgtvriW 37 dg+++ ++ d g +r+W tr|A0A1B0GS18|A0A1B0GS18_MOUSE 97 DGTLI-TCVDSGILRVW 112 77886.6888******* PP == domain 3 score: 6.6 bits; conditional E-value: 0.23 EEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 13 vtslafspdgaw.lasGsdDgtvriWd 38 v+ ++ +p ++ +a++++ + +++Wd tr|A0A1B0GS18|A0A1B0GS18_MOUSE 133 VCRMRQDPTHTHvVATCGKENALKVWD 159 56666667777725799*********9 PP == domain 4 score: 5.6 bits; conditional E-value: 0.48 EEEEE..EETTSSEEEEEETTSEEEEEE CS WD40 13 vtsla..fspdgawlasGsdDgtvriWd 38 +++++ f p ++ l++++ + vr++d tr|A0A1B0GS18|A0A1B0GS18_MOUSE 184 IWDQDtqFLPGSQKLVTCTGYHQVRVYD 211 67777778888999999966******98 PP == domain 5 score: 13.3 bits; conditional E-value: 0.0018 EEESS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvri 36 l+G +sv++l+ +p++++las++ D+ +ri tr|A0A1B0GS18|A0A1B0GS18_MOUSE 264 CLKGLaGSVRGLQCHPSKPLLASCGLDRVLRI 295 45544445***********************9 PP >> tr|D3Z3I0|D3Z3I0_MOUSE Cell division cycle 20B OS=Mus musculus OX=10090 GN=Cdc20b PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 7.7 0.5 0.1 8.8 9 38 .] 273 301 .. 259 301 .. 0.87 2 ? 2.9 0.9 3.4 2.9e+02 2 29 .. 306 332 .. 305 344 .. 0.74 3 ! 22.2 0.2 2.7e-06 0.00023 10 37 .. 354 382 .. 346 382 .. 0.87 4 ? 2.6 0.0 4 3.4e+02 1 34 [. 436 471 .. 436 475 .. 0.76 5 ! 15.8 0.1 0.00029 0.025 9 38 .] 487 517 .. 478 517 .. 0.89 Alignments for each domain: == domain 1 score: 7.7 bits; conditional E-value: 0.1 SSSSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GHssvtslafspdgawlasGsdDgtvriWd 38 H v+s+ + ++g+ la G+ g v +Wd tr|D3Z3I0|D3Z3I0_MOUSE 273 CH-YVSSVTWMREGSCLAVGTSEGEVQLWD 301 56.799999***********66*******9 PP == domain 2 score: 2.9 bits; conditional E-value: 3.4 EEEEEEESS.SSEEEEEEETTSSE....EEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw....lasGs 29 ++lr l GH s v +l +w l+sGs tr|D3Z3I0|D3Z3I0_MOUSE 306 KQLRNLHGHlSVVGAL------SWnhctLSSGS 332 678999***7668999......44444488887 PP == domain 3 score: 22.2 bits; conditional E-value: 2.7e-06 S.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvriW 37 H v+sl++spdg++l+sG+ Dg + iW tr|D3Z3I0|D3Z3I0_MOUSE 354 HkEAVCSLKWSPDGRLLSSGCNDGLLTIW 382 7455************************9 PP == domain 4 score: 2.6 bits; conditional E-value: 4 TEEEEEEESSSSEEEEEEETTSSEEEEE.ET.TSEE CS WD40 1 gqclrtltGHssvtslafspdgawlasG.sd.Dgtv 34 g++++t +++s ++sl + p + +a+G + ++ v tr|D3Z3I0|D3Z3I0_MOUSE 436 GKNIQTPSTQSQICSLIWLPKTKEIATGqGApKNDV 471 578899999988****99999999999865445555 PP == domain 5 score: 15.8 bits; conditional E-value: 0.00029 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 GH + v +l+ spd++ l+s+ Dgt +W+ tr|D3Z3I0|D3Z3I0_MOUSE 487 GHrDRVLHLSLSPDQTRLFSAAADGTACVWK 517 9*888**************9988*******6 PP >> sp|Q6P1F6|2ABA_MOUSE Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Mus muscul # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 6.6 0.0 0.22 19 12 37 .. 24 55 .. 11 56 .. 0.73 2 ? 7.2 0.0 0.15 13 23 38 .] 109 123 .. 74 123 .. 0.73 3 ? 4.6 0.1 0.98 84 9 37 .. 175 203 .. 167 204 .. 0.73 4 ? 4.8 0.0 0.83 71 14 36 .. 230 253 .. 219 255 .. 0.76 5 ? 8.9 0.1 0.043 3.7 11 38 .] 286 312 .. 277 312 .. 0.89 6 ? 1.6 0.0 8.3 7.1e+02 16 38 .] 348 370 .. 319 370 .. 0.85 Alignments for each domain: == domain 1 score: 6.6 bits; conditional E-value: 0.22 S......EEEEEEETTSSEEEEEETTSEEEEE CS WD40 12 s......vtslafspdgawlasGsdDgtvriW 37 + ++ + f+++g +la+G++ g v i+ sp|Q6P1F6|2ABA_MOUSE 24 DvaeadiISTVEFNHSGELLATGDKGGRVVIF 55 144455568999***********988888875 PP == domain 2 score: 7.2 bits; conditional E-value: 0.15 SEEEEEETTSEEEEEE CS WD40 23 awlasGsdDgtvriWd 38 ++l+s D+t+++W+ sp|Q6P1F6|2ABA_MOUSE 109 QFLLSTN-DKTIKLWK 123 4488766.*******6 PP == domain 3 score: 4.6 bits; conditional E-value: 0.98 SS.SSEEEEE.EETTSSEEEEEETTSEEEEE CS WD40 9 GH.ssvtsla.fspdgawlasGsdDgtvriW 37 +H +++s++ +s++ ++l s++ D + +W sp|Q6P1F6|2ABA_MOUSE 175 AHtYHINSISiNSDYETYL-SAD-DLRINLW 203 67445****9677777776.677.*999999 PP == domain 4 score: 4.8 bits; conditional E-value: 0.83 EEEEEETTSSE..EEEEETTSEEEE CS WD40 14 tslafspdgaw..lasGsdDgtvri 36 t+ f+p++ + s+s +gt+r+ sp|Q6P1F6|2ABA_MOUSE 230 TAAEFHPNSCNtfVYSSS-KGTIRL 253 566666666666588999.*****8 PP == domain 5 score: 8.9 bits; conditional E-value: 0.043 SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriWd 38 ss+++++fs++g+++++ d +v+iWd sp|Q6P1F6|2ABA_MOUSE 286 SSISDVKFSHSGRYMMT-RDYLSVKIWD 312 46999***********6.89*******9 PP == domain 6 score: 1.6 bits; conditional E-value: 8.3 EEEETTSSEEEEEETTSEEEEEE CS WD40 16 lafspdgawlasGsdDgtvriWd 38 ++++ + + +++Gs+++ r++d sp|Q6P1F6|2ABA_MOUSE 348 CCWNGSDSVVMTGSYNNFFRMFD 370 56999999999***999998887 PP >> sp|Q9WVB3|TLE6_MOUSE Transducin-like enhancer protein 6 OS=Mus musculus OX=10090 GN=Tle6 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.8 0.0 1.8 1.5e+02 4 38 .] 287 320 .. 284 320 .. 0.69 2 ! 11.7 0.0 0.0054 0.46 25 38 .] 402 415 .. 380 415 .. 0.70 3 ? 3.6 0.1 2 1.7e+02 4 38 .] 422 455 .. 419 455 .. 0.79 4 ? 2.5 0.0 4.4 3.8e+02 10 26 .. 465 484 .. 460 494 .. 0.78 5 ? 6.3 0.0 0.29 25 11 27 .. 511 527 .. 500 536 .. 0.75 6 ? 5.5 0.0 0.49 42 12 32 .. 553 573 .. 536 574 .. 0.89 Alignments for each domain: == domain 1 score: 3.8 bits; conditional E-value: 1.8 EEEEESSSS...EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGHss...vtslafspdgawlasGsdDgtvriWd 38 +r+l+ H+ v +a+s+ + ++++s +++W+ sp|Q9WVB3|TLE6_MOUSE 287 VRVLK-HQElllV--VAVSSFTRHVFTCS-QSGIKVWN 320 55555.5344443..34477788899***.*******8 PP == domain 2 score: 11.7 bits; conditional E-value: 0.0054 EEEEETTSEEEEEE CS WD40 25 lasGsdDgtvriWd 38 ++G DgtvriWd sp|Q9WVB3|TLE6_MOUSE 402 ALAGFTDGTVRIWD 415 347*88*******9 PP == domain 3 score: 3.6 bits; conditional E-value: 2 EEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +r l+G +s + l + +d+ w +G+ D +r Wd sp|Q9WVB3|TLE6_MOUSE 422 VRNLKGPtNSARNLVVKDDNIW--TGGLDACLRCWD 455 566666666667777889999*..8*9********9 PP == domain 4 score: 2.5 bits; conditional E-value: 4.4 S..SS.EEEEEEETTSSEEE CS WD40 10 H..ss.vtslafspdgawla 26 H +s + sla sp +wl+ sp|Q9WVB3|TLE6_MOUSE 465 HlfQSqIMSLAHSPTEDWLL 484 55423499**********85 PP == domain 5 score: 6.3 bits; conditional E-value: 0.29 SSEEEEEEETTSSEEEE CS WD40 11 ssvtslafspdgawlas 27 + + +l+fsp+g+w as sp|Q9WVB3|TLE6_MOUSE 511 NTILGLKFSPNGKWWAS 527 45999*********665 PP == domain 6 score: 5.5 bits; conditional E-value: 0.49 SEEEEEEETTSSEEEEEETTS CS WD40 12 svtslafspdgawlasGsdDg 32 +v++++ +g+++++Gs+D+ sp|Q9WVB3|TLE6_MOUSE 553 PVRCFDMTENGRLIITGSRDC 573 599***************997 PP >> sp|Q6GQT6|SCAP_MOUSE Sterol regulatory element-binding protein cleavage-activating protein OS=Mus musculus OX=10090 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.4 0.0 0.03 2.5 6 38 .] 771 802 .. 769 802 .. 0.94 2 ? 9.1 0.0 0.038 3.2 8 37 .. 1072 1101 .. 1063 1102 .. 0.72 3 ! 20.7 0.2 7.7e-06 0.00066 2 38 .] 1107 1143 .. 1106 1143 .. 0.79 4 ? 6.3 0.8 0.27 23 6 38 .] 1153 1183 .. 1148 1183 .. 0.72 5 ? 3.0 0.2 3.1 2.6e+02 23 38 .] 1209 1223 .. 1203 1223 .. 0.89 Alignments for each domain: == domain 1 score: 9.4 bits; conditional E-value: 0.03 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +l+GH ++ +l +dg +l+s++ g v +Wd sp|Q6GQT6|SCAP_MOUSE 771 VLRGHlMDIECL--ASDGMLLVSCCLAGQVCVWD 802 689**999****..99********99*******9 PP == domain 2 score: 9.1 bits; conditional E-value: 0.038 E.SS.SSEEEEEEETTSSE....EEEEETTSEEEEE CS WD40 8 t.GH.ssvtslafspdgaw....lasGsdDgtvriW 37 +H +++t+l + l++Gs D+t+r++ sp|Q6GQT6|SCAP_MOUSE 1072 PcAHqKPITAL------RAaagrLVTGSQDHTLRVF 1101 24899999999......333444679********97 PP == domain 3 score: 20.7 bits; conditional E-value: 7.7e-06 EEEEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 cl tl+GH + +t++ d+++ lasG+ Dg + +Wd sp|Q6GQT6|SCAP_MOUSE 1107 CCLFTLKGHsGAITAV--YIDQTMvLASGGQDGAICLWD 1143 59*******555**99..3344444689**********9 PP == domain 4 score: 6.3 bits; conditional E-value: 0.27 EEESS.SSEEEEEEETTSSE....EEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgaw....lasGsdDgtvriWd 38 t+ +H ++vtsl + ++s++ D + iWd sp|Q6GQT6|SCAP_MOUSE 1153 TF-AHrGDVTSL------TCtascVISSGLDDFISIWD 1183 55.798999988......443333556667*******9 PP == domain 5 score: 3.0 bits; conditional E-value: 3.1 SEEEEEETTSEEEEEE CS WD40 23 awlasGsdDgtvriWd 38 ++l++G+ g v +Wd sp|Q6GQT6|SCAP_MOUSE 1209 NLLVTGG-QGCVSFWD 1223 6799***.*******9 PP >> tr|E9PZP8|E9PZP8_MOUSE HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1 OS=Mus musculus OX # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 19.1 0.1 2.5e-05 0.0021 6 38 .] 3421 3454 .. 3415 3454 .. 0.81 2 ? 2.6 0.0 4.2 3.6e+02 11 34 .. 3579 3604 .. 3569 3606 .. 0.72 3 ? 5.7 0.0 0.44 37 8 37 .. 3621 3651 .. 3616 3651 .. 0.86 4 ? 7.7 0.7 0.1 8.8 1 37 [. 3658 3701 .. 3658 3702 .. 0.82 5 ! 15.2 0.0 0.00043 0.036 2 37 .. 3736 3772 .. 3735 3779 .. 0.92 Alignments for each domain: == domain 1 score: 19.1 bits; conditional E-value: 2.5e-05 EEESS.SSE.EEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssv.tslafspdgawlasGsdDgtvriWd 38 +l++H + v t++ ++ + +la+++ Dgt+r+W+ tr|E9PZP8|E9PZP8_MOUSE 3421 KLEAHqNRVmTCV-WCNKKGLLATSGNDGTIRVWN 3454 489**88898899.7777788898888*******8 PP == domain 2 score: 2.6 bits; conditional E-value: 4.2 SS..EEEEE.EETTSSEEEEEETTSEE CS WD40 11 ss..vtsla.fspdgawlasGsdDgtv 34 ++ vt++a fs d ++ G Dg++ tr|E9PZP8|E9PZP8_MOUSE 3579 KDvsVTCIAwFSEDRPFA-VGYFDGKL 3604 33559***9888888885.59889987 PP == domain 3 score: 5.7 bits; conditional E-value: 0.44 ESSSS.EEEEEEETTSSEEEEEETTSEEEEE CS WD40 8 tGHss.vtslafspdgawlasGsdDgtvriW 37 ++H+ s++++p g+ l+++ + +v++W tr|E9PZP8|E9PZP8_MOUSE 3621 DAHKEtLVSMKWDPTGHILMTCAKEENVKLW 3651 47844455*********************** PP == domain 4 score: 7.7 bits; conditional E-value: 0.1 TEEEEEEESS.SSEEEEEEETTSSE.............EEEEETTSEEEEE CS WD40 1 gqclrtltGH.ssvtslafspdgaw.............lasGsdDgtvriW 37 ++cl++l H s v+++ aw +a+G+ +g v +W tr|E9PZP8|E9PZP8_MOUSE 3658 WRCLHSL-CHpSTVNGI------AWcslpgkgskmqllMATGCQNGLVCVW 3701 68****9.8*899****......66666666667776589*********** PP == domain 5 score: 15.2 bits; conditional E-value: 0.00043 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 +c++ l+GH ++v+ +afs+dg l+sG+ g iW tr|E9PZP8|E9PZP8_MOUSE 3736 KCVYQLRGHiTPVRTVAFSSDGLALVSGGLGGLMNIW 3772 79**************************988888888 PP >> sp|Q5DQR4|STB5L_MOUSE Syntaxin-binding protein 5-like OS=Mus musculus OX=10090 GN=Stxbp5l PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 7.1 0.0 0.16 14 21 38 .] 122 138 .. 101 138 .. 0.67 2 ? 6.5 0.0 0.25 22 8 38 .] 204 236 .. 198 236 .. 0.82 3 ! 12.4 0.1 0.0034 0.29 12 38 .] 251 277 .. 241 277 .. 0.86 4 ! 11.6 0.2 0.0058 0.49 24 38 .] 459 476 .. 405 476 .. 0.82 Alignments for each domain: == domain 1 score: 7.1 bits; conditional E-value: 0.16 TSSEEEEEETTSEEEEEE CS WD40 21 dgawlasGsdDgtvriWd 38 +ga+++++s D t+++W+ sp|Q5DQR4|STB5L_MOUSE 122 EGALVSASS-DDTLHLWN 138 455565556.*******8 PP == domain 2 score: 6.5 bits; conditional E-value: 0.25 ESS.SSEEEEE..EETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtsla..fspdgawlasGsdDgtvriWd 38 ++H ++v +l+ ++g++l+ G ++gtv +Wd sp|Q5DQR4|STB5L_MOUSE 204 KTHpGPVVHLSdsPRDEGKLLI-GYENGTVVFWD 236 6798889999987777777776.**********9 PP == domain 3 score: 12.4 bits; conditional E-value: 0.0034 SEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriWd 38 ++s++++++g+ +++++ Dg++ +W+ sp|Q5DQR4|STB5L_MOUSE 251 AIHSIDWHHEGKQFMCSHSDGSLTLWN 277 39*************9988*******8 PP == domain 4 score: 11.6 bits; conditional E-value: 0.0058 E...EEEEETTSEEEEEE CS WD40 24 w...lasGsdDgtvriWd 38 + +++G+ Dgt+++Wd sp|Q5DQR4|STB5L_MOUSE 459 YpeiIITGHADGTIKFWD 476 155488***********9 PP >> sp|Q8BL74|TF3C2_MOUSE General transcription factor 3C polypeptide 2 OS=Mus musculus OX=10090 GN=Gtf3c2 PE=2 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.6 0.0 0.012 1 12 37 .. 464 507 .. 447 508 .. 0.83 2 ? 3.6 0.0 2 1.8e+02 15 38 .] 555 580 .. 532 580 .. 0.74 3 ! 15.3 0.1 0.0004 0.034 6 38 .] 604 638 .. 596 638 .. 0.71 4 ? 4.2 0.0 1.3 1.1e+02 8 36 .. 818 859 .. 813 860 .. 0.66 Alignments for each domain: == domain 1 score: 10.6 bits; conditional E-value: 0.012 S.EEEEEEETTSSE...................EEEEETTSEEEEE CS WD40 12 s.vtslafspdgaw...................lasGsdDgtvriW 37 + +++l+f+p+gaw l ++s Dg+v ++ sp|Q8BL74|TF3C2_MOUSE 464 GcIWDLKFCPSGAWehpetlrkapllprlgllaL-ACS-DGKVLLF 507 1599999***********************8533.79*.***9886 PP == domain 2 score: 3.6 bits; conditional E-value: 2 EEEEETTSSE..EEEEETTSEEEEEE CS WD40 15 slafspdgaw..lasGsdDgtvriWd 38 sla+ p + la+G ++g v +W+ sp|Q8BL74|TF3C2_MOUSE 555 SLAWMPTRPHhhLAAGYYNGMVVFWN 580 565666666666799*99*******8 PP == domain 3 score: 15.3 bits; conditional E-value: 0.0004 EEESS.SSEEEEEEETTSSE.EE.EEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgaw.la.sGsdDgtvriWd 38 + +H + v+ +++++ ++ l+ +Gs D+++++Wd sp|Q8BL74|TF3C2_MOUSE 604 CFLAHdQAVRTIQWCKANSHfLVsAGS-DRKIKFWD 638 566897679999755555555552567.*******9 PP == domain 4 score: 4.2 bits; conditional E-value: 1.3 ESSSS..........EEEEEEETTSSE...EEEEETTSEEEE CS WD40 8 tGHss..........vtslafspdgaw...lasGsdDgtvri 36 +GHs ++ ++fsp+ + l+sG+ g vri sp|Q8BL74|TF3C2_MOUSE 818 EGHSQlcldrlqleaIHKVRFSPNLDSygwLVSGGQSGLVRI 859 5774434444444445555667766666669****9999998 PP >> tr|A0A140LJ36|A0A140LJ36_MOUSE PRA1 family protein OS=Mus musculus OX=10090 GN=Gm45208 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 5.9 0.0 0.38 33 12 38 .] 8 33 .. 2 33 .. 0.82 2 ? 9.4 0.0 0.03 2.6 6 34 .. 85 114 .. 78 119 .. 0.86 3 ! 16.9 0.0 0.00013 0.011 13 37 .. 138 162 .. 124 162 .. 0.84 Alignments for each domain: == domain 1 score: 5.9 bits; conditional E-value: 0.38 SEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriWd 38 +vtsl f++d++ ++ + + vri++ tr|A0A140LJ36|A0A140LJ36_MOUSE 8 GVTSLHFNQDQSCFC-CAMETGVRIYN 33 49***********96.55599999997 PP == domain 2 score: 9.4 bits; conditional E-value: 0.03 EEESS.SSEEEEEEETTSSEEEEEETTSEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtv 34 t+ +H s+v +++ ++ g+ +as+s +gt+ tr|A0A140LJ36|A0A140LJ36_MOUSE 85 TINAHqSDVACVSLNQPGTVVASASQKGTL 114 4569*999*****************88875 PP == domain 3 score: 16.9 bits; conditional E-value: 0.00013 EEEEEEETTSSEEEEEETTSEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriW 37 +++ fs+d+++l+++sd+gtv+i+ tr|A0A140LJ36|A0A140LJ36_MOUSE 138 LYCINFSHDSSFLCASSDKGTVHIF 162 78************99******995 PP >> sp|Q91VM3|WIPI4_MOUSE WD repeat domain phosphoinositide-interacting protein 4 OS=Mus musculus OX=10090 GN=Wdr45 PE=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 5.5 0.0 0.5 43 12 38 .] 8 33 .. 2 33 .. 0.82 2 ? 8.9 0.0 0.041 3.5 6 34 .. 187 216 .. 181 221 .. 0.87 3 ! 16.5 0.0 0.00017 0.014 13 37 .. 240 264 .. 226 264 .. 0.84 Alignments for each domain: == domain 1 score: 5.5 bits; conditional E-value: 0.5 SEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriWd 38 +vtsl f++d++ ++ + + vri++ sp|Q91VM3|WIPI4_MOUSE 8 GVTSLHFNQDQSCFC-CAMETGVRIYN 33 49***********96.55599999997 PP == domain 2 score: 8.9 bits; conditional E-value: 0.041 EEESS.SSEEEEEEETTSSEEEEEETTSEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtv 34 t+ +H s+v +++ ++ g+ +as+s +gt+ sp|Q91VM3|WIPI4_MOUSE 187 TINAHqSDVACVSLNQPGTVVASASQKGTL 216 4569*999*****************88875 PP == domain 3 score: 16.5 bits; conditional E-value: 0.00017 EEEEEEETTSSEEEEEETTSEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriW 37 +++ fs+d+++l+++sd+gtv+i+ sp|Q91VM3|WIPI4_MOUSE 240 LYCINFSHDSSFLCASSDKGTVHIF 264 78************99******995 PP >> sp|Q8K4Q0|RPTOR_MOUSE Regulatory-associated protein of mTOR OS=Mus musculus OX=10090 GN=Rptor PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 2.4 0.0 4.6 4e+02 16 38 .] 1029 1050 .. 1006 1050 .. 0.80 2 ? 8.9 0.0 0.044 3.7 19 38 .] 1078 1097 .. 1058 1097 .. 0.71 3 ! 14.4 0.2 0.00077 0.066 5 38 .] 1160 1194 .. 1156 1194 .. 0.88 4 ? 3.1 0.0 2.8 2.4e+02 13 31 .. 1256 1274 .. 1248 1281 .. 0.85 5 ? 4.2 0.0 1.3 1.1e+02 11 37 .. 1302 1328 .. 1288 1329 .. 0.80 Alignments for each domain: == domain 1 score: 2.4 bits; conditional E-value: 4.6 EEEETTSSEEEEEETTSEEEEEE CS WD40 16 lafspdgawlasGsdDgtvriWd 38 ++f+p + +a ++ + ++ +Wd sp|Q8K4Q0|RPTOR_MOUSE 1029 VKFHPFTPCIAVAD-KDSICFWD 1050 56********9877.*******9 PP == domain 2 score: 8.9 bits; conditional E-value: 0.044 ETTSSEEEEEETTSEEEEEE CS WD40 19 spdgawlasGsdDgtvriWd 38 +d ++l++++dDg +r+W+ sp|Q8K4Q0|RPTOR_MOUSE 1078 GQDCSLLLTATDDGAIRVWK 1097 445567999*9********6 PP == domain 3 score: 14.4 bits; conditional E-value: 0.00077 EEEESS.SSEEEEEEETTSSEEEEE.ETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasG.sdDgtvriWd 38 + tG s+vtsl+ +++ +++++G + Dg++r++d sp|Q8K4Q0|RPTOR_MOUSE 1160 DIPTGAdSCVTSLSCDSHRSLIVAGlG-DGSIRVYD 1194 567899777****************88.******98 PP == domain 4 score: 3.1 bits; conditional E-value: 2.8 EEEEEEETTSSEEEEEETT CS WD40 13 vtslafspdgawlasGsdD 31 t+l+ +p +++a+Gs++ sp|Q8K4Q0|RPTOR_MOUSE 1256 LTALDIHPQANLIACGSMN 1274 699*************976 PP == domain 5 score: 4.2 bits; conditional E-value: 1.3 SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriW 37 + +++laf+p+ + la Gs D + ++ sp|Q8K4Q0|RPTOR_MOUSE 1302 GAISCLAFHPHWPHLAVGSNDYYISVY 1328 339****9999999*****9*999887 PP >> tr|A0A1W2P7S4|A0A1W2P7S4_MOUSE Predicted gene, 21964 OS=Mus musculus OX=10090 GN=Gm21964 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.1 0.4 0.017 1.5 5 38 .] 149 181 .. 145 181 .. 0.89 2 ? 6.5 0.0 0.24 21 12 38 .] 246 272 .. 237 272 .. 0.85 3 ? 3.6 0.1 2.1 1.8e+02 13 38 .] 294 312 .. 279 312 .. 0.77 4 ? 4.7 0.0 0.89 76 4 28 .. 321 343 .. 314 348 .. 0.75 5 ? 9.2 0.1 0.035 3 13 31 .. 410 428 .. 364 431 .. 0.89 Alignments for each domain: == domain 1 score: 10.1 bits; conditional E-value: 0.017 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 +tl+ H + v+++a s+ + +++ g +r+Wd tr|A0A1W2P7S4|A0A1W2P7S4_MOUSE 149 GTLR-HgKRVNAIAISSAPCHVYTCG-TGYIRVWD 181 6676.9888*****************.*******9 PP == domain 2 score: 6.5 bits; conditional E-value: 0.24 SE.EEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 sv.tslafspdgawlasGsdDgtvriWd 38 s+ +sla s+d ++ +++ +g v iWd tr|A0A1W2P7S4|A0A1W2P7S4_MOUSE 246 SIcYSLALSSDAHLCLASF-KGFVEIWD 272 3668999*******99777.*******9 PP == domain 3 score: 3.6 bits; conditional E-value: 2.1 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 +t++ + w +G++D t++ Wd tr|A0A1W2P7S4|A0A1W2P7S4_MOUSE 294 ITGF-----KFW--TGGEDTTLYSWD 312 4444.....335..8**********9 PP == domain 4 score: 4.7 bits; conditional E-value: 0.89 EEEEESSSSEEEEEEETTSSEEEEE CS WD40 4 lrtltGHssvtslafspdgawlasG 28 +++l H + s+ +p+ w+++G tr|A0A1W2P7S4|A0A1W2P7S4_MOUSE 321 QHSL-CH-EILSITHDPSEEWVLAG 343 3333.55.5*************998 PP == domain 5 score: 9.2 bits; conditional E-value: 0.035 EEEEEEETTSSEEEEEETT CS WD40 13 vtslafspdgawlasGsdD 31 + ++ +s+d+++l++Gs+D tr|A0A1W2P7S4|A0A1W2P7S4_MOUSE 410 ILCCEVSSDNRYLVTGSKD 428 78999************98 PP >> sp|Q9ESE1|LRBA_MOUSE Lipopolysaccharide-responsive and beige-like anchor protein OS=Mus musculus OX=10090 GN=Lrba PE # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 5.1 0.2 0.65 56 13 37 .. 2589 2616 .. 2570 2617 .. 0.71 2 ? 10.7 0.2 0.011 0.97 2 37 .. 2622 2662 .. 2621 2663 .. 0.82 3 ? 3.2 0.0 2.6 2.2e+02 4 29 .. 2683 2709 .. 2680 2715 .. 0.82 4 ? 9.9 0.0 0.02 1.7 11 34 .. 2773 2796 .. 2763 2798 .. 0.74 5 ? 1.6 0.0 8.5 7.3e+02 6 36 .. 2809 2840 .. 2804 2841 .. 0.81 Alignments for each domain: == domain 1 score: 5.1 bits; conditional E-value: 0.65 EEEEE..EETTSSE.EEEEETTSEEEEE CS WD40 13 vtsla..fspdgaw.lasGsdDgtvriW 37 v+s++ +d+++ l++G +D++ r++ sp|Q9ESE1|LRBA_MOUSE 2589 VHSQCfvITSDNRYiLVCGFWDKSFRVY 2616 55555666666666256889******98 PP == domain 2 score: 10.7 bits; conditional E-value: 0.011 EEEEEEESSSS.EEEEE....EETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGHss.vtsla....fspdgawlasGsdDgtvriW 37 +++++ GH + vt+la + + +++sGs+D t+ +W sp|Q9ESE1|LRBA_MOUSE 2622 KLIQVVFGHWDvVTCLArsesYIGGNCYILSGSRDATLLLW 2662 5666767**3358***99999888888899*********** PP == domain 3 score: 3.2 bits; conditional E-value: 2.6 EEEEESSSS.EEEEEEETTSSEEEEEE CS WD40 4 lrtltGHss.vtslafspdgawlasGs 29 +ltGH+ +t+ a++ + +++sGs sp|Q9ESE1|LRBA_MOUSE 2683 RAILTGHDYeITCAAVCAELGLVLSGS 2709 5689***447****9999999999998 PP == domain 4 score: 9.9 bits; conditional E-value: 0.02 SSEEEEEEETTSSEEEEEETTSEE CS WD40 11 ssvtslafspdgawlasGsdDgtv 34 +++++++ s+dg++l++G+d+g v sp|Q9ESE1|LRBA_MOUSE 2773 DHIRAIQLSRDGQYLLTGGDNGVV 2796 34*****************66665 PP == domain 5 score: 1.6 bits; conditional E-value: 8.5 EEESS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvri 36 + G +++++a s d++ ++sG+ g++ + sp|Q9ESE1|LRBA_MOUSE 2809 AYPGCdAGIRAMALSFDQRCIISGMASGSIVL 2840 566775569***************98999976 PP >> sp|Q8K400|STXB5_MOUSE Syntaxin-binding protein 5 OS=Mus musculus OX=10090 GN=Stxbp5 PE=1 SV=3 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 2.1 0.0 6.1 5.2e+02 22 38 .] 112 127 .. 89 127 .. 0.67 2 ? 4.4 0.0 1.1 98 8 38 .] 193 225 .. 187 225 .. 0.83 3 ! 15.7 0.3 0.0003 0.026 13 38 .] 241 266 .. 232 266 .. 0.88 4 ! 11.4 0.3 0.0066 0.57 22 38 .] 439 465 .. 387 465 .. 0.61 Alignments for each domain: == domain 1 score: 2.1 bits; conditional E-value: 6.1 SSEEEEEETTSEEEEEE CS WD40 22 gawlasGsdDgtvriWd 38 ga l+s+ D t+++W+ sp|Q8K400|STXB5_MOUSE 112 GA-LVSALADDTLHLWN 127 33.568866*******8 PP == domain 2 score: 4.4 bits; conditional E-value: 1.1 ESS.SSEEEEE..EETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtsla..fspdgawlasGsdDgtvriWd 38 ++H ++v +++ ++g++l+ G + gtv +Wd sp|Q8K400|STXB5_MOUSE 193 KAHpGPVVHISdnPMDEGKLLI-GFESGTVVLWD 225 5787778888887777888887.**********9 PP == domain 3 score: 15.7 bits; conditional E-value: 0.0003 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 ++s+a++++g+ +++++ Dgt+ iW+ sp|Q8K400|STXB5_MOUSE 241 IHSVAWHHEGKQFICSHSDGTLTIWN 266 9*************9988*******8 PP == domain 4 score: 11.4 bits; conditional E-value: 0.0066 SSE..........EEEEETTSEEEEEE CS WD40 22 gaw..........lasGsdDgtvriWd 38 g+w +++G+ Dg+v++Wd sp|Q8K400|STXB5_MOUSE 439 GNWglgaqsypeiIITGHADGSVKFWD 465 344666666677688***********9 PP >> tr|E9PYP2|E9PYP2_MOUSE Neurobeachin-like 1 OS=Mus musculus OX=10090 GN=Nbeal1 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 18.5 0.9 3.9e-05 0.0033 8 37 .. 2432 2462 .. 2425 2463 .. 0.83 2 ? 10.7 0.0 0.012 0.99 2 36 .. 2477 2512 .. 2476 2513 .. 0.86 Alignments for each domain: == domain 1 score: 18.5 bits; conditional E-value: 3.9e-05 ESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriW 37 H + vt+la++ g l+sGs+D t++iW tr|E9PYP2|E9PYP2_MOUSE 2432 IRHiDIVTCLATDYCGIHLISGSRDTTCMIW 2462 4475669************************ PP == domain 2 score: 10.7 bits; conditional E-value: 0.012 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvri 36 ++ ++l GH + + s+ s + ++ +sGs+Dgtv i tr|E9PYP2|E9PYP2_MOUSE 2477 KPFQILYGHtDEILSVGISTELDMAVSGSRDGTVII 2512 5788999**6669999999999***********976 PP >> tr|E9Q2M9|E9Q2M9_MOUSE WD repeat and FYVE domain-containing 4 OS=Mus musculus OX=10090 GN=Wdfy4 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 18.6 0.0 3.6e-05 0.0031 6 38 .] 2976 3009 .. 2971 3009 .. 0.88 2 ! 16.3 0.2 0.0002 0.017 2 38 .] 3054 3099 .. 3053 3099 .. 0.70 Alignments for each domain: == domain 1 score: 18.6 bits; conditional E-value: 3.6e-05 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriWd 38 l GH + vt+l s ++l+sGs D+t+ +Wd tr|E9Q2M9|E9Q2M9_MOUSE 2976 ALYGHtQAVTCLTASVTFSLLVSGSQDRTCILWD 3009 577**888****99999999*************9 PP == domain 2 score: 16.3 bits; conditional E-value: 0.0002 EEEEEEESS.SS...EEEEE......EETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ss...vtsla......fspdgawlasGsdDgtvriWd 38 q+l ++t+ ++ +t+++ ++ ++ ++Gs+Dg vriW+ tr|E9Q2M9|E9Q2M9_MOUSE 3054 QPLASITTAwGPegtITCCCivegpaWDASHVI-ITGSKDGMVRIWK 3099 667777655434556*****6666665555555.58**********6 PP >> sp|Q925E7|2ABD_MOUSE Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform OS=Mus muscul # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 6.4 0.0 0.25 22 13 37 .. 37 61 .. 17 62 .. 0.76 2 ? 7.1 0.0 0.16 13 24 38 .] 113 129 .. 80 129 .. 0.71 3 ? 4.5 0.1 1 88 9 37 .. 181 209 .. 173 210 .. 0.69 4 ? 3.8 0.0 1.7 1.5e+02 13 36 .. 235 259 .. 225 261 .. 0.75 5 ? 8.0 0.1 0.082 7 11 38 .] 292 318 .. 283 318 .. 0.89 Alignments for each domain: == domain 1 score: 6.4 bits; conditional E-value: 0.25 EEEEEEETTSSEEEEEETTSEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriW 37 ++ + f+ +g++la+G++ g v i+ sp|Q925E7|2ABD_MOUSE 37 ISTVEFNYSGDLLATGDKGGRVVIF 61 68888***********988888875 PP == domain 2 score: 7.1 bits; conditional E-value: 0.16 E...EEEEETTSEEEEEE CS WD40 24 w...lasGsdDgtvriWd 38 l+s D+t+++W+ sp|Q925E7|2ABD_MOUSE 113 AahfLLSTN-DKTIKLWK 129 244488766.*******6 PP == domain 3 score: 4.5 bits; conditional E-value: 1 SS.SSEEEEE.EETTSSEEEEEETTSEEEEE CS WD40 9 GH.ssvtsla.fspdgawlasGsdDgtvriW 37 +H +++s++ +s++ ++l s++ D + +W sp|Q925E7|2ABD_MOUSE 181 AHtYHINSISvNSDHETYL-SAD-DLRINLW 209 67445****9555555555.677.*999999 PP == domain 4 score: 3.8 bits; conditional E-value: 1.7 EEEEEEETTSSE..EEEEETTSEEEE CS WD40 13 vtslafspdgaw..lasGsdDgtvri 36 +t+ f+p++ + s+s +gt+r+ sp|Q925E7|2ABD_MOUSE 235 ITAAEFHPHQCNvfVYSSS-KGTIRL 259 5667777777772246999.*****8 PP == domain 5 score: 8.0 bits; conditional E-value: 0.082 SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriWd 38 ss+++++fs++g+++++ d +v++Wd sp|Q925E7|2ABD_MOUSE 292 SSISDVKFSHSGRYMMT-RDYLSVKVWD 318 46999***********6.88*******9 PP >> sp|Q8BG02|2ABG_MOUSE Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform OS=Mus muscul # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 7.4 0.0 0.12 10 7 37 .. 15 51 .. 8 52 .. 0.72 2 ? 6.9 0.0 0.18 16 13 38 .] 92 119 .. 70 119 .. 0.68 3 ? 4.9 0.1 0.8 68 5 37 .. 166 199 .. 163 200 .. 0.70 4 ? 9.6 0.1 0.025 2.1 11 38 .] 282 308 .. 273 308 .. 0.89 Alignments for each domain: == domain 1 score: 7.4 bits; conditional E-value: 0.12 EESSSS......EEEEEEETTSSEEEEEETTSEEEEE CS WD40 7 ltGHss......vtslafspdgawlasGsdDgtvriW 37 l+ Hs ++ + f++ g +la+G++ g v i+ sp|Q8BG02|2ABG_MOUSE 15 LRDHSYvteadvISTVEFNHTGELLATGDKGGRVVIF 51 46775534445457777***********988888875 PP == domain 2 score: 6.9 bits; conditional E-value: 0.18 EEEEEEETTSSE...EEEEETTSEEEEEE CS WD40 13 vtslafspdgaw...lasGsdDgtvriWd 38 ++ +++ p ++ l+s D+t+++W+ sp|Q8BG02|2ABG_MOUSE 92 INKIKWLPQQNAahsLLSTN-DKTIKLWK 119 66675444444466667656.*******6 PP == domain 3 score: 4.9 bits; conditional E-value: 0.8 EEEE.SS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 5 rtlt.GH.ssvtslafspdgawlasGsdDgtvriW 37 rt+ GH +++s+++++d +s++ D + +W sp|Q8BG02|2ABG_MOUSE 166 RTFAnGHtYHINSISVNSDCETYMSAD-DLRINLW 199 6663399666****9555555545677.9999999 PP == domain 4 score: 9.6 bits; conditional E-value: 0.025 SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriWd 38 ssv++++fs++g+++++ d tv++Wd sp|Q8BG02|2ABG_MOUSE 282 SSVSDVKFSHSGRYMLT-RDYLTVKVWD 308 4699999*********6.89*******9 PP >> tr|Q3UU56|Q3UU56_MOUSE Predicted gene 29609 OS=Mus musculus OX=10090 GN=Gm29609 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.6 0.0 0.012 1 12 37 .. 464 507 .. 447 508 .. 0.83 2 ? 3.6 0.0 2 1.8e+02 15 38 .] 555 580 .. 532 580 .. 0.74 3 ! 15.3 0.1 0.0004 0.034 6 38 .] 604 638 .. 596 638 .. 0.71 Alignments for each domain: == domain 1 score: 10.6 bits; conditional E-value: 0.012 S.EEEEEEETTSSE...................EEEEETTSEEEEE CS WD40 12 s.vtslafspdgaw...................lasGsdDgtvriW 37 + +++l+f+p+gaw l ++s Dg+v ++ tr|Q3UU56|Q3UU56_MOUSE 464 GcIWDLKFCPSGAWehpetlrkapllprlgllaL-ACS-DGKVLLF 507 1599999***********************8533.79*.***9886 PP == domain 2 score: 3.6 bits; conditional E-value: 2 EEEEETTSSE..EEEEETTSEEEEEE CS WD40 15 slafspdgaw..lasGsdDgtvriWd 38 sla+ p + la+G ++g v +W+ tr|Q3UU56|Q3UU56_MOUSE 555 SLAWMPTRPHhhLAAGYYNGMVVFWN 580 565666666666799*99*******8 PP == domain 3 score: 15.3 bits; conditional E-value: 0.0004 EEESS.SSEEEEEEETTSSE.EE.EEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgaw.la.sGsdDgtvriWd 38 + +H + v+ +++++ ++ l+ +Gs D+++++Wd tr|Q3UU56|Q3UU56_MOUSE 604 CFLAHdQAVRTIQWCKANSHfLVsAGS-DRKIKFWD 638 566897679999755555555552567.*******9 PP >> sp|Q8C0M8|DNAI1_MOUSE Dynein intermediate chain 1, axonemal OS=Mus musculus OX=10090 GN=Dnai1 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.1 0.0 0.037 3.2 11 38 .] 385 413 .. 377 413 .. 0.83 2 ? 2.2 1.0 5.7 4.9e+02 10 37 .. 432 464 .. 422 465 .. 0.72 3 ! 17.8 0.7 6.3e-05 0.0054 2 38 .] 532 570 .. 531 570 .. 0.85 4 ? 4.2 0.0 1.3 1.1e+02 12 38 .] 585 612 .. 575 612 .. 0.81 5 ? 1.7 0.0 7.8 6.7e+02 12 32 .. 633 652 .. 624 658 .. 0.83 Alignments for each domain: == domain 1 score: 9.1 bits; conditional E-value: 0.037 SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 11 ssvtslafspdgawla.sGsdDgtvriWd 38 s++ +l+++ d+++l+ G +Dg+v i++ sp|Q8C0M8|DNAI1_MOUSE 385 SGIMCLDVHVDHPYLVvVGYYDGNVAIYN 413 5699**********8648989****9997 PP == domain 2 score: 2.2 bits; conditional E-value: 5.7 S.SSEEEEE.....EETTSSEEEEEETTSEEEEE CS WD40 10 H.ssvtsla.....fspdgawlasGsdDgtvriW 37 H ++v+ ++ +++ ++++ +s Dg + W sp|Q8C0M8|DNAI1_MOUSE 432 HtDPVWQVKwqkddMDHNLNFFSVSS-DGRIVSW 464 76669999766666666667787778.*999988 PP == domain 3 score: 17.8 bits; conditional E-value: 6.3e-05 EEEEEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 q l t+++H v ++ ++p+++ ++ s+s D tv+iWd sp|Q8C0M8|DNAI1_MOUSE 532 QFLDTYDAHnMAVDAVLWNPYHTKVFmSCSSDWTVKIWD 570 567899***555************8558877*******9 PP == domain 4 score: 4.2 bits; conditional E-value: 1.3 SEEEEEEETTSSEEEEE.ETTSEEEEEE CS WD40 12 svtslafspdgawlasG.sdDgtvriWd 38 v ++a+ p+++ ++++ + Dg+ +++d sp|Q8C0M8|DNAI1_MOUSE 585 AVGDVAWAPYSSTVFAAvTTDGKAHVFD 612 4889*********9877656**999987 PP == domain 5 score: 1.7 bits; conditional E-value: 7.8 SEEEEEEETTSSEEEEEETTS CS WD40 12 svtslafspdgawlasGsdDg 32 +t+++f+p ++ ++ G+ D+ sp|Q8C0M8|DNAI1_MOUSE 633 KITHVQFNPIHPIIIVGD-DR 652 49***********99998.54 PP >> sp|Q6VH22|IF172_MOUSE Intraflagellar transport protein 172 homolog OS=Mus musculus OX=10090 GN=Ift172 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 12.3 0.0 0.0037 0.32 12 38 .] 15 44 .. 3 44 .. 0.77 2 ? 5.6 0.0 0.48 41 13 37 .. 69 93 .. 60 94 .. 0.86 3 ? 2.6 0.1 4.3 3.7e+02 8 34 .. 149 176 .. 142 177 .. 0.78 4 ? 2.0 0.0 6.4 5.5e+02 13 29 .. 289 305 .. 280 318 .. 0.77 Alignments for each domain: == domain 1 score: 12.3 bits; conditional E-value: 0.0037 S...EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 s...vtslafspdgawlasGsdDgtvriWd 38 + vt++a+s+++a +a ++ D+ v ++d sp|Q6VH22|IF172_MOUSE 15 GaakVTCMAWSQNNAKFAVCTVDRVVLLYD 44 1345***********************998 PP == domain 2 score: 5.6 bits; conditional E-value: 0.48 EEEEEEETTSSEEEEE.ETTSEEEEE CS WD40 13 vtslafspdgawlasG.sdDgtvriW 37 v ++afspd++ +a G + D+ ++++ sp|Q6VH22|IF172_MOUSE 69 VKGMAFSPDSTKIAIGqT-DNIIYVY 93 7899************66.****998 PP == domain 3 score: 2.6 bits; conditional E-value: 4.3 ESS.SSEEEEEEETTSSEEEEEETTSEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtv 34 G s v +l ++ +g+ ++sG+ Dgt+ sp|Q6VH22|IF172_MOUSE 149 YGTeSYVVALTTNCSGKGILSGHADGTI 176 46646688898888999999*******9 PP == domain 4 score: 2.0 bits; conditional E-value: 6.4 EEEEEEETTSSEEEEEE CS WD40 13 vtslafspdgawlasGs 29 vt+la+ +dg+ l++G+ sp|Q6VH22|IF172_MOUSE 289 VTALAWKRDGSRLCAGT 305 9***********99874 PP >> sp|Q5SSI6|UTP18_MOUSE U3 small nucleolar RNA-associated protein 18 homolog OS=Mus musculus OX=10090 GN=Utp18 PE=1 SV # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 4.2 0.0 1.3 1.1e+02 13 37 .. 250 274 .. 241 275 .. 0.83 2 ? 4.7 0.0 0.89 76 17 38 .] 382 406 .. 325 406 .. 0.64 3 ? 9.1 0.0 0.037 3.2 15 38 .] 426 449 .. 412 449 .. 0.89 4 ? 3.4 0.0 2.4 2e+02 12 29 .. 471 488 .. 463 497 .. 0.86 Alignments for each domain: == domain 1 score: 4.2 bits; conditional E-value: 1.3 EEEEEEETTSSEEEEEETTSEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriW 37 ++s++f+p + ++ ++ D+ + ++ sp|Q5SSI6|UTP18_MOUSE 250 ISSVQFHPGAQVVMVSGVDNAISLF 274 89**********987777*999875 PP == domain 2 score: 4.7 bits; conditional E-value: 0.89 E...EETTSSEEEEEETTSEEEEEE CS WD40 17 a...fspdgawlasGsdDgtvriWd 38 a fs+d++ + + s++g v++Wd sp|Q5SSI6|UTP18_MOUSE 382 AastFSSDSKRIYTYSENGEVYVWD 406 1334777777777667777777776 PP == domain 3 score: 9.1 bits; conditional E-value: 0.037 EEEEETTSSEEEEEETTSEEEEEE CS WD40 15 slafspdgawlasGsdDgtvriWd 38 s+a s++g+++a+Gs+ g v i++ sp|Q5SSI6|UTP18_MOUSE 426 SIAASKNGQYVACGSKSGVVNIYN 449 6779*****************997 PP == domain 4 score: 3.4 bits; conditional E-value: 2.4 SEEEEEEETTSSEEEEEE CS WD40 12 svtslafspdgawlasGs 29 +vtslaf+p la +s sp|Q5SSI6|UTP18_MOUSE 471 GVTSLAFNPTTEILAVAS 488 59***********99877 PP >> sp|P58742|AAAS_MOUSE Aladin OS=Mus musculus OX=10090 GN=Aaas PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.0 0.1 3 2.6e+02 15 38 .] 153 179 .. 142 179 .. 0.82 2 ! 25.7 0.3 2e-07 1.7e-05 6 38 .] 240 273 .. 235 273 .. 0.87 3 ? 3.4 0.0 2.3 2e+02 12 28 .. 289 305 .. 282 315 .. 0.78 Alignments for each domain: == domain 1 score: 3.0 bits; conditional E-value: 3 EEE...EETTSSEEEEEETTSEEEEEE CS WD40 15 sla...fspdgawlasGsdDgtvriWd 38 +l+ ++p+ + +a + D ++r+++ sp|P58742|AAAS_MOUSE 153 CLRvfaWHPHTNKFAVALLDDSIRVYN 179 444666*******999977******97 PP == domain 2 score: 25.7 bits; conditional E-value: 2e-07 EEESSSSEEEEEEETTSSEEEEEE.TTSEEEEEE CS WD40 6 tltGHssvtslafspdgawlasGs.dDgtvriWd 38 + GH++vtsla+ p+g wl+s+s D + +Wd sp|P58742|AAAS_MOUSE 240 SHPGHTPVTSLAWAPNGGWLLSASpVDAVILVWD 273 3359*99****************999*******9 PP == domain 3 score: 3.4 bits; conditional E-value: 2.3 SEEEEEEETTSSEEEEE CS WD40 12 svtslafspdgawlasG 28 +vt l +spdg+ +++ sp|P58742|AAAS_MOUSE 289 GVTNLLWSPDGSKVLAT 305 59*********998754 PP >> sp|Q8CBW4|DC121_MOUSE DDB1- and CUL4-associated factor 12-like protein 1 OS=Mus musculus OX=10090 GN=Dcaf12l1 PE=2 S # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 4.4 0.0 1.2 99 12 31 .. 189 208 .. 180 210 .. 0.82 2 ! 18.1 0.8 5.3e-05 0.0045 3 38 .] 224 259 .. 222 259 .. 0.81 3 ? 3.4 0.0 2.2 1.9e+02 10 38 .] 300 328 .. 291 328 .. 0.77 Alignments for each domain: == domain 1 score: 4.4 bits; conditional E-value: 1.2 SEEEEEEETTSSEEEEEETT CS WD40 12 svtslafspdgawlasGsdD 31 +++++ +p++++la+G+++ sp|Q8CBW4|DC121_MOUSE 189 GIHAVELNPSKTLLATGGEN 208 4999*************965 PP == domain 2 score: 18.1 bits; conditional E-value: 5.3e-05 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 cl+ + GH +++ ++a+ +d +sGs+Dgtv +W+ sp|Q8CBW4|DC121_MOUSE 224 CLGDCQGHrDWIFAIAWMSDTVA-VSGSRDGTVALWK 259 89999***999****55555444.48**********6 PP == domain 3 score: 3.4 bits; conditional E-value: 2.2 SSS.EEEEEEETTSSEEEEE..ETTSEEEEEE CS WD40 10 Hss.vtslafspdgawlasG..sdDgtvriWd 38 v++lafs ++ l G s Dg ++W+ sp|Q8CBW4|DC121_MOUSE 300 N-RkVRALAFSNKNQEL--GavSLDGYFHLWK 328 3.2599**********9..43467*******6 PP >> sp|P97412|LYST_MOUSE Lysosomal-trafficking regulator OS=Mus musculus OX=10090 GN=Lyst PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 4.9 0.2 0.79 68 9 30 .. 3552 3572 .. 3544 3576 .. 0.81 2 ! 16.0 0.0 0.00025 0.021 3 38 .] 3595 3631 .. 3593 3631 .. 0.86 3 ? 4.5 0.2 1.1 91 4 37 .. 3638 3676 .. 3635 3677 .. 0.67 4 ? 6.2 0.1 0.31 27 7 38 .] 3682 3722 .. 3678 3722 .. 0.69 Alignments for each domain: == domain 1 score: 4.9 bits; conditional E-value: 0.79 SSSSEEEEEEETTSSEEEEEET CS WD40 9 GHssvtslafspdgawlasGsd 30 H vts+a+ pd+ l++Gs+ sp|P97412|LYST_MOUSE 3552 QH-QVTSCAWVPDSCQLFTGSK 3572 46.6****************94 PP == domain 2 score: 16.0 bits; conditional E-value: 0.00025 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 + +l GH +t+l++++ + ++s s+Dgt+ +Wd sp|P97412|LYST_MOUSE 3595 SQMHLYGHtEEITGLCVCKPYSVMISVSRDGTCIVWD 3631 578999**666*****8888888888999*******9 PP == domain 3 score: 4.5 bits; conditional E-value: 1.1 EEEEESS.SSEEEEE.EETTSSE..EE..EEETTSEEEEE CS WD40 4 lrtltGH.ssvtsla.fspdgaw..la..sGsdDgtvriW 37 +++l GH s+vt+++ +g+ ++ +G+ +r+W sp|P97412|LYST_MOUSE 3638 VQSLAGHkSPVTAVSaSETSGDIatVCdsAGG-GSDLRLW 3676 68999**888****875555555213232356.8888888 PP == domain 4 score: 6.2 bits; conditional E-value: 0.31 EESS.SS...EEEEEEETTSSE....EEEEE.TTSEEEEEE CS WD40 7 ltGH.ss...vtslafspdgaw....lasGs.dDgtvriWd 38 l GH + ++s+afs +++G+ ++g vr+W+ sp|P97412|LYST_MOUSE 3682 LVGHvHCreiICSVAFSNQPEGvsinVIAGGlENGIVRLWS 3722 568852358789998544444444665778868*******5 PP >> sp|O88485|DC1I1_MOUSE Cytoplasmic dynein 1 intermediate chain 1 OS=Mus musculus OX=10090 GN=Dync1i1 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 4.4 0.0 1.1 94 7 38 .] 263 308 .. 258 308 .. 0.66 2 ? 9.5 0.0 0.028 2.4 7 38 .] 318 352 .. 312 352 .. 0.81 3 ? 2.4 0.1 4.9 4.2e+02 9 37 .. 370 401 .. 361 402 .. 0.65 4 ! 13.4 0.3 0.0016 0.14 6 37 .. 462 500 .. 459 501 .. 0.78 Alignments for each domain: == domain 1 score: 4.4 bits; conditional E-value: 1.1 EESS..SS..EEEEEEETTSSEEEEEET..........TSEEEEEE CS WD40 7 ltGH..ss..vtslafspdgawlasGsd..........DgtvriWd 38 ++ H ++ vt++++s + l+ +s+ Dg +W+ sp|O88485|DC1I1_MOUSE 263 YDEHwsKHrvVTCMDWSLQYPELMVASYsnnedaphepDGVALVWN 308 66787444878***76666665665554446667777888888886 PP == domain 2 score: 9.5 bits; conditional E-value: 0.028 EESS..SSEEEEEEETTSSEEEEEE.TTSEEEEEE CS WD40 7 ltGH..ssvtslafspdgawlasGs.dDgtvriWd 38 + H ssv s++f + ++ l+ G+ + g + +Wd sp|O88485|DC1I1_MOUSE 318 YVFHcqSSVMSVCFARFHPNLVVGGtYSGQIVLWD 352 55676577*****99999999988548*******9 PP == domain 3 score: 2.4 bits; conditional E-value: 4.9 SS.SSEEEEE..EETTSSEEEEEETTSEEEEE CS WD40 9 GH.ssvtsla..fspdgawlasGsdDgtvriW 37 +H +v+++ ++ + l++ s Dg+ W sp|O88485|DC1I1_MOUSE 370 AHtHPVYCVNvvGTQNAHNLITVSTDGKMCSW 401 56336999987744444445566669988877 PP == domain 4 score: 13.4 bits; conditional E-value: 0.0016 EEESS.SSEEEEE.......EETTSSEEEEEETTSEEEEE CS WD40 6 tltGH.ssvtsla.......fspdgawlasGsdDgtvriW 37 +++GH ++vt++ + ++ ++ ++s D tv++W sp|O88485|DC1I1_MOUSE 462 VFEGHqGPVTGINchmavgpIDFSHLFV-TSSFDWTVKLW 500 689**88899997777888766666666.5666******* PP >> sp|O88487|DC1I2_MOUSE Cytoplasmic dynein 1 intermediate chain 2 OS=Mus musculus OX=10090 GN=Dync1i2 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.5 0.0 2.1 1.8e+02 10 38 .] 253 291 .. 246 291 .. 0.76 2 ? 3.8 0.0 1.7 1.4e+02 8 38 .] 302 335 .. 295 335 .. 0.71 3 ? 4.0 0.2 1.5 1.3e+02 9 37 .. 353 384 .. 344 385 .. 0.70 4 ! 13.1 0.6 0.002 0.17 7 37 .. 446 483 .. 442 484 .. 0.77 5 ? 3.1 0.0 2.8 2.4e+02 2 32 .. 489 519 .. 488 527 .. 0.83 6 ? 2.5 0.0 4.5 3.9e+02 13 38 .] 547 572 .. 535 572 .. 0.82 Alignments for each domain: == domain 1 score: 3.5 bits; conditional E-value: 2.1 SSS.EEEEEEETTSSEEEEEET..........TSEEEEEE CS WD40 10 Hss.vtslafspdgawlasGsd..........DgtvriWd 38 H v++l++s+ + l+ +s+ Dg +W+ sp|O88487|DC1I2_MOUSE 253 H-RvVSCLDWSSQYPELLVASYnnneeaphepDGVALVWN 291 4.4479**99999988887776566777888888888886 PP == domain 2 score: 3.8 bits; conditional E-value: 1.7 ESS..SSEEEEEEETTSSEEEEEE.TTSEEEEEE CS WD40 8 tGH..ssvtslafspdgawlasGs.dDgtvriWd 38 H s v s f + ++ l+ G+ + g + +Wd sp|O88487|DC1I2_MOUSE 302 VFHcqSAVMSATFAKFHPNLVVGGtYSGQIVLWD 335 45653448777777777778878538*******9 PP == domain 3 score: 4.0 bits; conditional E-value: 1.5 SS.SSEEEEE...EETTSSEEEEEETTSEEEEE CS WD40 9 GH.ssvtsla...fspdgawlasGsdDgtvriW 37 +H +v+++ ++ +++++ ++ Dg++ W sp|O88487|DC1I2_MOUSE 353 AHtHPVYCVNvvgTQNAHNLISIST-DGKICSW 384 5633699998875555555565667.****999 PP == domain 4 score: 13.1 bits; conditional E-value: 0.002 EESS.SSEEEEE.......EETTSSEEEEEETTSEEEEE CS WD40 7 ltGH.ssvtsla.......fspdgawlasGsdDgtvriW 37 ++GH +++t++ ++ ++ +++ +s D tv++W sp|O88487|DC1I2_MOUSE 446 FEGHqGPITGIHchaavgaVDFSHLFVT-SSFDWTVKLW 483 88**877776666669988788888875.555******* PP == domain 5 score: 3.1 bits; conditional E-value: 2.8 EEEEEEESSSS.EEEEEEETTSSEEEEEETTS CS WD40 2 qclrtltGHss.vtslafspdgawlasGsdDg 32 ++l++++ s+ v+++ +sp ++ l+++ Dg sp|O88487|DC1I2_MOUSE 489 KPLYSFEDNSDyVYDVMWSPTHPALFACV-DG 519 688999989556***********999877.87 PP == domain 6 score: 2.5 bits; conditional E-value: 4.5 EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 13 vtslafspdgawlasGsdDgtvriWd 38 + +++ ++g+ +a G+ g + i+d sp|O88487|DC1I2_MOUSE 547 LNRVRWTHSGREIAVGDSEGQIVIYD 572 68999***********66******98 PP >> sp|Q8C761|WDR60_MOUSE WD repeat-containing protein 60 OS=Mus musculus OX=10090 GN=Wdr60 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 14.5 0.1 0.00074 0.063 5 38 .] 634 668 .. 630 668 .. 0.83 2 ? 6.6 0.0 0.22 19 12 36 .. 852 879 .. 841 881 .. 0.71 3 ? 4.0 0.0 1.6 1.3e+02 7 22 .. 895 909 .. 890 926 .. 0.83 Alignments for each domain: == domain 1 score: 14.5 bits; conditional E-value: 0.00074 EEEESSSSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 5 rtltGHssvtslafspdgawla.sGsdDgtvriWd 38 ++l s vt+++fsp +a+l+ +G+ g+v +Wd sp|Q8C761|WDR60_MOUSE 634 KVLICESKVTCCCFSPLKAFLLfAGTVHGSVVVWD 668 55555555************8659**********9 PP == domain 2 score: 6.6 bits; conditional E-value: 0.22 S..EEEEEEETTSSEEE.EEETTSEEEE CS WD40 12 s..vtslafspdgawla.sGsdDgtvri 36 + v+ ++fsp ++ +G+ Dg++r+ sp|Q8C761|WDR60_MOUSE 852 PikVNVIDFSPFEETVFlAGCSDGSIRL 879 2556778899999996337866*****8 PP == domain 3 score: 4.0 bits; conditional E-value: 1.6 EESSSSEEEEEEETTS CS WD40 7 ltGHssvtslafspdg 22 +GH vtsl++sp sp|Q8C761|WDR60_MOUSE 895 TSGH-AVTSLQWSPTR 909 479*.9****999975 PP >> sp|A6PWY4|WDR76_MOUSE WD repeat-containing protein 76 OS=Mus musculus OX=10090 GN=Wdr76 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.9 0.0 1.6 1.4e+02 10 38 .] 321 342 .. 306 342 .. 0.72 2 ? 10.7 0.0 0.012 1 4 35 .. 351 384 .. 348 385 .. 0.81 3 ? 5.9 0.1 0.37 32 14 36 .. 405 427 .. 395 429 .. 0.81 4 ? 7.8 0.0 0.092 7.9 2 38 .] 483 521 .. 482 521 .. 0.69 Alignments for each domain: == domain 1 score: 3.9 bits; conditional E-value: 1.6 S.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvriWd 38 H s v+ l +a+G + g + +Wd sp|A6PWY4|WDR76_MOUSE 321 HpSEVRTL--------VAAGAKSGQIGLWD 342 43445555........999**********9 PP == domain 2 score: 10.7 bits; conditional E-value: 0.012 EEEEESSSS.EEEEEEETTSSE.EEEEETTSEEE CS WD40 4 lrtltGHss.vtslafspdgaw.lasGsdDgtvr 35 ++++ +Hs v++l+fsp ++ l+s s+Dgt+r sp|A6PWY4|WDR76_MOUSE 351 MYVFYAHSRyVSCLSFSPTNPAhLLSLSYDGTLR 384 67899**557***********95456588***98 PP == domain 3 score: 5.9 bits; conditional E-value: 0.37 EEEEEETTSSEEEEEETTSEEEE CS WD40 14 tslafspdgawlasGsdDgtvri 36 +s++f d++ l+ G++Dg++ + sp|A6PWY4|WDR76_MOUSE 405 SSFDFLNDSSSLLVGHWDGHLSL 427 57888889999999******976 PP == domain 4 score: 7.8 bits; conditional E-value: 0.092 EEEEEEESS.SSEEEEE.EETTSSEEE.EEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtsla.fspdgawla.sGsdDgtvriWd 38 q+l +lt H +s+ s + g+ ++ ++ D+++r++d sp|A6PWY4|WDR76_MOUSE 483 QPLISLTEHsKSIASAYfSPVTGNRVVtTCA-DCKLRVFD 521 78999****8888555424444444651566.******98 PP >> sp|Q8BGW4|DC122_MOUSE DDB1- and CUL4-associated factor 12-like protein 2 OS=Mus musculus OX=10090 GN=Dcaf12l2 PE=2 S # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 4.7 0.0 0.93 80 11 31 .. 156 176 .. 147 178 .. 0.81 2 ! 15.7 0.5 0.00029 0.025 3 37 .. 192 226 .. 190 227 .. 0.77 3 ? 2.4 0.0 4.8 4.1e+02 12 38 .] 269 296 .. 259 296 .. 0.76 Alignments for each domain: == domain 1 score: 4.7 bits; conditional E-value: 0.93 SSEEEEEEETTSSEEEEEETT CS WD40 11 ssvtslafspdgawlasGsdD 31 +++++++ +p++++la+G+++ sp|Q8BGW4|DC122_MOUSE 156 CGIHAIQLNPSKTLLATGGEN 176 3499**************965 PP == domain 2 score: 15.7 bits; conditional E-value: 0.00029 EEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 3 clrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 cl+ GH +++ ++a+ +d +sGs+Dgtv +W sp|Q8BGW4|DC122_MOUSE 192 CLGDRQGHrDWIFAIAWMSDTVA-VSGSRDGTVALW 226 666668**999****55555444.48********** PP == domain 3 score: 2.4 bits; conditional E-value: 4.8 S.EEEEEEETTSSEEEEE..ETTSEEEEEE CS WD40 12 s.vtslafspdgawlasG..sdDgtvriWd 38 v++lafs ++ l G s Dg ++W+ sp|Q8BGW4|DC122_MOUSE 269 RkVRALAFSGRNQEL--GavSLDGYFHLWK 296 249999999999998..43367*******6 PP >> sp|Q6NXY1|TBC31_MOUSE TBC1 domain family member 31 OS=Mus musculus OX=10090 GN=Tbc1d31 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.6 0.0 2 1.7e+02 15 38 .] 47 70 .. 27 70 .. 0.85 2 ! 12.1 0.3 0.0043 0.37 8 38 .] 123 153 .. 115 153 .. 0.87 3 ? 5.6 0.0 0.46 39 18 37 .. 222 241 .. 204 242 .. 0.88 Alignments for each domain: == domain 1 score: 3.6 bits; conditional E-value: 2 EEEEETTSSEEEEEETTSEEEEEE CS WD40 15 slafspdgawlasGsdDgtvriWd 38 +af+ +g+ +++G+ g+++++d sp|Q6NXY1|TBC31_MOUSE 47 NVAFDGSGDSFIAGDHQGNIYVFD 70 588***********88*****998 PP == domain 2 score: 12.1 bits; conditional E-value: 0.0043 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 +GH ssv+s++++ +g++ ++ s t +Wd sp|Q6NXY1|TBC31_MOUSE 123 RGHeSSVCSISVHASGRYAITTS-SDTAQLWD 153 8**999************99989.88888887 PP == domain 3 score: 5.6 bits; conditional E-value: 0.46 EETTSSEEEEEETTSEEEEE CS WD40 18 fspdgawlasGsdDgtvriW 37 + +dg+ la+G++ +++++W sp|Q6NXY1|TBC31_MOUSE 222 VTRDGRILAAGGKSNHLHLW 241 5899**************** PP >> sp|Q8BUI3|LRWD1_MOUSE Leucine-rich repeat and WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=LRWD1 PE=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.5 0.2 8.3e-05 0.0071 3 38 .] 386 423 .. 384 423 .. 0.88 2 ? 2.7 0.0 3.9 3.3e+02 16 38 .] 512 527 .. 483 527 .. 0.69 3 ? 4.0 0.0 1.5 1.3e+02 15 38 .] 560 583 .. 553 583 .. 0.92 Alignments for each domain: == domain 1 score: 17.5 bits; conditional E-value: 8.3e-05 EEEEEESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 c ++++H + + l+fsp++ l+++s+D+ + +Wd sp|Q8BUI3|LRWD1_MOUSE 386 CCSVIRAHkKAIATLCFSPSHEThLFTASYDKRIILWD 423 667889**888************5459999*******9 PP == domain 2 score: 2.7 bits; conditional E-value: 3.9 EEEETTSSEEEE.EETTSEEEEEE CS WD40 16 lafspdgawlas.GsdDgtvriWd 38 + +as Gs gt+++W+ sp|Q8BUI3|LRWD1_MOUSE 512 V--------VASkGSGQGTIYLWS 527 2........5544777*******5 PP == domain 3 score: 4.0 bits; conditional E-value: 1.5 EEEEETTSSEEEEEETTSEEEEEE CS WD40 15 slafspdgawlasGsdDgtvriWd 38 sl+++p ++++++G++ g+v i+d sp|Q8BUI3|LRWD1_MOUSE 560 SLSTCPGKNLVLCGDEEGSVWIYD 583 68899*****************98 PP >> sp|Q6VNB8|WDFY3_MOUSE WD repeat and FYVE domain-containing protein 3 OS=Mus musculus OX=10090 GN=Wdfy3 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 2.2 0.0 5.5 4.7e+02 14 37 .. 3066 3087 .. 3043 3088 .. 0.77 2 ! 15.3 0.2 0.00041 0.035 7 38 .] 3105 3137 .. 3099 3137 .. 0.79 3 ? 2.4 0.1 4.7 4e+02 4 37 .. 3144 3177 .. 3141 3178 .. 0.74 4 ! 12.0 0.2 0.0044 0.37 5 37 .. 3188 3226 .. 3185 3227 .. 0.81 Alignments for each domain: == domain 1 score: 2.2 bits; conditional E-value: 5.5 EEEEEETTSSEEEEEETTSEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriW 37 ++ ++p+ +++++G+ v +W sp|Q6VNB8|WDFY3_MOUSE 3066 CA--VCPNPKLVITGGTSTVVCVW 3087 22..79*********99******* PP == domain 2 score: 15.3 bits; conditional E-value: 0.00041 EESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgawlasGsdDgtvriWd 38 l GH + vt+ s + ++sGs+D+t+ iWd sp|Q6VNB8|WDFY3_MOUSE 3105 LLGHtDTVTCATASLAYHIIVSGSRDRTCIIWD 3137 569*666**996666666689***********9 PP == domain 3 score: 2.4 bits; conditional E-value: 4.7 EEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGH.ssvtsla.fspdgawlasGsdDgtvriW 37 l+ l+GH +v++l+ + g+ + s+ +++W sp|Q6VNB8|WDFY3_MOUSE 3144 LTQLRGHrAPVSALCiNELTGDIV-SCA-GTYIHVW 3177 66799**99998887555566664.788.9999999 PP == domain 4 score: 12.0 bits; conditional E-value: 0.0044 EEEESS.SSEEEEEEETTSSE.....EEEEETTSEEEEE CS WD40 5 rtltGH.ssvtslafspdgaw.....lasGsdDgtvriW 37 t+tG + + +++ s + w +++G+ Dg vr+W sp|Q6VNB8|WDFY3_MOUSE 3188 NTFTGRsQQIVCCCMSEMNEWdtqnvIVTGHSDGVVRFW 3226 67888855588999888888888888789*88******* PP >> sp|P61963|DCAF7_MOUSE DDB1- and CUL4-associated factor 7 OS=Mus musculus OX=10090 GN=Dcaf7 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 4.0 0.2 1.5 1.3e+02 13 37 .. 123 148 .. 109 148 .. 0.83 2 ? 10.3 0.0 0.015 1.3 6 38 .] 169 205 .. 161 205 .. 0.79 3 ! 15.0 1.0 0.0005 0.043 4 38 .] 259 295 .. 256 295 .. 0.84 Alignments for each domain: == domain 1 score: 4.0 bits; conditional E-value: 1.5 EEEEEEETTSSEEE.EEETTSEEEEE CS WD40 13 vtslafspdgawla.sGsdDgtvriW 37 ts++++ ++l+ ++s D t+ iW sp|P61963|DCAF7_MOUSE 123 LTSFDWNEVDPYLLgTSSIDTTCTIW 148 7999999999999966789******* PP == domain 2 score: 10.3 bits; conditional E-value: 0.015 EEESS.SSEEEEEEETTSSE...EEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgaw...lasGsdDgtvriWd 38 l +H + v+++afs+ g +as + Dg+vr++d sp|P61963|DCAF7_MOUSE 169 QLIAHdKEVYDIAFSRAGGGrdmFASVGADGSVRMFD 205 36799888****88877777997666566*****998 PP == domain 3 score: 15.0 bits; conditional E-value: 0.0005 EEEEESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 4 lrtltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 + l H +v+++a+ p+++ ++ ++ dD+ iWd sp|P61963|DCAF7_MOUSE 259 VARLNNHrACVNGIAWAPHSSCHIcTAADDHQALIWD 295 5667789888************7636689*******9 PP >> sp|Q9EPN1|NBEA_MOUSE Neurobeachin OS=Mus musculus OX=10090 GN=Nbea PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.8 0.1 1.7 1.5e+02 14 37 .. 2671 2695 .. 2657 2696 .. 0.75 2 ? 10.2 0.3 0.017 1.4 4 37 .. 2703 2741 .. 2700 2741 .. 0.78 3 ? 2.4 0.0 4.9 4.2e+02 5 29 .. 2764 2789 .. 2761 2792 .. 0.77 4 ? 7.6 0.0 0.11 9.5 17 37 .. 2859 2879 .. 2846 2880 .. 0.89 5 ? 3.1 0.0 2.9 2.5e+02 2 34 .. 2885 2918 .. 2884 2922 .. 0.86 Alignments for each domain: == domain 1 score: 3.8 bits; conditional E-value: 1.7 EEEEEETTSSEEE.EEETTSEEEEE CS WD40 14 tslafspdgawla.sGsdDgtvriW 37 +++ + d+++++ +G +D++ r++ sp|Q9EPN1|NBEA_MOUSE 2671 HCFVVTADNRYILiCGFWDKSFRVY 2695 35556779999653888******98 PP == domain 2 score: 10.2 bits; conditional E-value: 0.017 EEEEESSSS.EEEEE....EETTSSEEEEEETTSEEEEE CS WD40 4 lrtltGHss.vtsla....fspdgawlasGsdDgtvriW 37 +++ GH + vt+la + +++sGs+D t+ +W sp|Q9EPN1|NBEA_MOUSE 2703 TQIVFGHWDvVTCLArsesYIGGDCYIVSGSRDATLLLW 2741 555559*3358***9888877777779************ PP == domain 3 score: 2.4 bits; conditional E-value: 4.9 EEEESSSS.EEEEEEETTSSEEEEEE CS WD40 5 rtltGHss.vtslafspdgawlasGs 29 +ltGH++ v +++++ + +++sG sp|Q9EPN1|NBEA_MOUSE 2764 AVLTGHDHeVVCVSVCAELGLVISGA 2789 6899**55799**8888888788876 PP == domain 4 score: 7.6 bits; conditional E-value: 0.11 EEETTSSEEEEEETTSEEEEE CS WD40 17 afspdgawlasGsdDgtvriW 37 s+dg+ l++G+d+g v +W sp|Q9EPN1|NBEA_MOUSE 2859 LLSSDGQNLVTGGDNGVVEVW 2879 5799***************** PP == domain 5 score: 3.1 bits; conditional E-value: 2.9 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtv 34 ++l+++ G ++++++ s+d++ l++G+ g++ sp|Q9EPN1|NBEA_MOUSE 2885 KQLYIYPGCdAGIRAMDLSHDQRTLITGMASGSI 2918 678899999777****************878887 PP >> sp|Q9EP82|WDR4_MOUSE tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 OS=Mus musculus OX=10090 GN=W # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.5 0.0 0.013 1.1 9 36 .. 145 173 .. 138 175 .. 0.86 2 ! 13.7 0.0 0.0013 0.11 9 37 .. 188 218 .. 180 219 .. 0.67 Alignments for each domain: == domain 1 score: 10.5 bits; conditional E-value: 0.013 SS.SSEEEEEEETTSSEEEEEETTSEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvri 36 GH s ++a+spd ++++++++D ++r+ sp|Q9EP82|WDR4_MOUSE 145 GHlSMLLDVAVSPDDQFVLTADRDEKIRV 173 88555789*******************98 PP == domain 2 score: 13.7 bits; conditional E-value: 0.0013 SS.SSEEEEEEETTSSE.EEEEETTSEEEEE CS WD40 9 GH.ssvtslafspdgaw.lasGsdDgtvriW 37 GH +v+ + + p+++ l+s+s Dgt+r+W sp|Q9EP82|WDR4_MOUSE 188 GHtEFVSRILVVPSHPElLLSSSGDGTLRLW 218 886668777744444442556666******* PP >> sp|Q8BIA4|FBXW8_MOUSE F-box/WD repeat-containing protein 8 OS=Mus musculus OX=10090 GN=Fbxw8 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 5.8 0.1 0.39 33 18 38 .] 217 236 .. 188 236 .. 0.74 2 ? 4.4 0.0 1.1 94 22 38 .] 269 285 .. 261 285 .. 0.80 3 ? 5.2 0.0 0.64 55 3 38 .] 424 461 .. 422 461 .. 0.60 4 ? 5.9 0.1 0.37 31 6 38 .] 470 501 .. 466 501 .. 0.76 Alignments for each domain: == domain 1 score: 5.8 bits; conditional E-value: 0.39 EETTSSEEEEEETTSEEEEEE CS WD40 18 fspdgawlasGsdDgtvriWd 38 s+dg + +G g vr+Wd sp|Q8BIA4|FBXW8_MOUSE 217 RSHDGVVI-AGYTSGDVRVWD 236 45566666.6*88*******9 PP == domain 2 score: 4.4 bits; conditional E-value: 1.1 SSEEEEEETTSEEEEEE CS WD40 22 gawlasGsdDgtvriWd 38 +++ +++ +Dg + iWd sp|Q8BIA4|FBXW8_MOUSE 269 SSLAVAAYEDGILNIWD 285 445678899*******9 PP == domain 3 score: 5.2 bits; conditional E-value: 0.64 EEEEEESS..SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 3 clrtltGH..ssvtslafspdgaw.lasGsdDgtvriWd 38 cl +l G ++ t++ ++ + ++sG +D+ vri d sp|Q8BIA4|FBXW8_MOUSE 424 CLSKL-GNalGDFTCVNIRDSPPNlMVSGNMDRRVRIHD 461 55555.3335556788633333331469988*****976 PP == domain 4 score: 5.9 bits; conditional E-value: 0.37 EEESS.SSEEEEEEETTSSE....EEEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgaw....lasGsdDgtvriWd 38 +l++H +v+++ ++ ++sG++ g v +Wd sp|Q8BIA4|FBXW8_MOUSE 470 SLSAHqLGVSAV------QMddwkVVSGGEEGLVSVWD 501 577885558777......44444888***********9 PP >> sp|Q9Z0H1|WDR46_MOUSE WD repeat-containing protein 46 OS=Mus musculus OX=10090 GN=Wdr46 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 1.7 0.0 7.8 6.7e+02 20 38 .] 326 344 .. 306 344 .. 0.73 2 ! 16.0 0.0 0.00024 0.021 5 38 .] 352 386 .. 348 386 .. 0.88 3 ? 4.1 0.3 1.4 1.2e+02 4 25 .. 442 461 .. 439 469 .. 0.81 Alignments for each domain: == domain 1 score: 1.7 bits; conditional E-value: 7.8 TTSSE.EEEEETTSEEEEEE CS WD40 20 pdgaw.lasGsdDgtvriWd 38 p++a ++ G+ +gtv +W+ sp|Q9Z0H1|WDR46_MOUSE 326 PYNAViHL-GHSNGTVSLWS 344 44444236.977*******5 PP == domain 2 score: 16.0 bits; conditional E-value: 0.00024 EEEESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++ H ++v+++a+++ g+++a+++ D+ ++i+d sp|Q9Z0H1|WDR46_MOUSE 352 AKILCHrGGVRAVAVDSTGTYMATSGLDHQLKIFD 386 555589999**************9999******98 PP == domain 3 score: 4.1 bits; conditional E-value: 1.4 EEEEESSSSEEEEEEETTSSEE CS WD40 4 lrtltGHssvtslafspdgawl 25 ++ l+GH v++l+f+p + l sp|Q9Z0H1|WDR46_MOUSE 442 THRLSGH--VHGLQFCPFEDVL 461 6889***..******9998876 PP >> sp|Q80Y17|L2GL1_MOUSE Lethal(2) giant larvae protein homolog 1 OS=Mus musculus OX=10090 GN=Llgl1 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 4.2 2.0 1.3 1.1e+02 9 37 .. 235 263 .. 196 264 .. 0.85 2 ! 13.3 0.0 0.0018 0.15 16 38 .] 446 460 .. 428 460 .. 0.85 Alignments for each domain: == domain 1 score: 4.2 bits; conditional E-value: 1.3 SSSSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 9 GHssvtslafspdgawlasGsdDgtvriW 37 G + sl++ +dg+ ++s++ Dg+ iW sp|Q80Y17|L2GL1_MOUSE 235 GNQQLESLCWGRDGSSIISSHSDGSYAIW 263 444467999***********88**98888 PP == domain 2 score: 13.3 bits; conditional E-value: 0.0018 EEEETTSSEEEEEETTSEEEEEE CS WD40 16 lafspdgawlasGsdDgtvriWd 38 l l++G++Dgtvr+Wd sp|Q80Y17|L2GL1_MOUSE 446 L--------LLTGHEDGTVRFWD 460 3........679**********9 PP >> tr|A0A1Y7VNZ0|A0A1Y7VNZ0_MOUSE DDB1 and CUL4-associated factor 4 OS=Mus musculus OX=10090 GN=Dcaf4 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 13.0 0.0 0.0022 0.19 9 38 .] 382 412 .. 376 412 .. 0.88 2 ? 8.2 0.0 0.07 6 2 38 .] 417 456 .. 416 456 .. 0.74 Alignments for each domain: == domain 1 score: 13.0 bits; conditional E-value: 0.0022 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 H s vts+++ ++ + l+++++ g++++Wd tr|A0A1Y7VNZ0|A0A1Y7VNZ0_MOUSE 382 FHdSAVTSVQVFKEEQHLMASDMSGKIKLWD 412 59677*****999****999999*******9 PP == domain 2 score: 8.2 bits; conditional E-value: 0.07 EEEEEEESSSSEEEEE......EETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGHssvtsla......fspdgawlasGsdDgtvriWd 38 +c+r ++GH v+ a +g ++a + D+ riW+ tr|A0A1Y7VNZ0|A0A1Y7VNZ0_MOUSE 417 KCVRQYEGH--VNEYAylplhmHEEEGILVA-VGQDCYTRIWS 456 79*******..99887666665555555555.566*******5 PP >> sp|A2AH22|AMRA1_MOUSE Activating molecule in BECN1-regulated autophagy protein 1 OS=Mus musculus OX=10090 GN=Ambra1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.7 0.0 1.8 1.6e+02 16 36 .. 59 79 .. 58 80 .. 0.92 2 ! 21.8 1.0 3.5e-06 0.0003 1 38 [] 85 124 .. 85 124 .. 0.74 3 ? 2.7 0.1 3.9 3.3e+02 11 38 .] 138 164 .. 128 164 .. 0.84 Alignments for each domain: == domain 1 score: 3.7 bits; conditional E-value: 1.8 EEEETTSSEEEEEETTSEEEE CS WD40 16 lafspdgawlasGsdDgtvri 36 lafspd ++las + +++++i sp|A2AH22|AMRA1_MOUSE 59 LAFSPDRTLLASTHVNHNIYI 79 68*********9999999987 PP == domain 2 score: 21.8 bits; conditional E-value: 3.5e-06 TEEEEEEESS..SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 1 gqclrtltGH..ssvtslafspdgaw.lasGsdDgtvriWd 38 g+c+++l GH + +++ f+p + +asG+ Dg vriWd sp|A2AH22|AMRA1_MOUSE 85 GKCVHSLIGHrrT-PWCVTFHPTISGlIASGCLDGEVRIWD 124 79********844.4666444444443789999*******9 PP == domain 3 score: 2.7 bits; conditional E-value: 3.9 SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriWd 38 + + slaf+p ++l+ ++ + +++Wd sp|A2AH22|AMRA1_MOUSE 138 NAIASLAFHPTAQLLLIAT-ANEIHFWD 164 4599**********99899.89999998 PP >> sp|Q9CYU6|DPH7_MOUSE Diphthine methyltransferase OS=Mus musculus OX=10090 GN=Dph7 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 5.2 0.2 0.61 52 13 38 .] 199 223 .. 184 223 .. 0.64 2 ! 15.3 0.1 0.0004 0.034 6 38 .] 233 267 .. 228 267 .. 0.81 3 ? 8.4 0.5 0.061 5.2 18 38 .] 434 455 .. 416 455 .. 0.79 Alignments for each domain: == domain 1 score: 5.2 bits; conditional E-value: 0.61 EEEEEEETTSSE.....EEEEETTSEEEEEE CS WD40 13 vtslafspdgaw.....lasGsdDgtvriWd 38 + ++ ++ + sG+dD+ +r Wd sp|Q9CYU6|DPH7_MOUSE 199 IAAF------NYwqtelVYSGGDDCLLRGWD 223 5555......4446664779********998 PP == domain 2 score: 15.3 bits; conditional E-value: 0.0004 EEESS.SSEEEEEEETTSSEE.EEEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawl.asGsdDgtvriWd 38 t + H +v+s++ sp++ + a+Gs+D +v +Wd sp|Q9CYU6|DPH7_MOUSE 233 TSKRHcMGVCSIQSSPHQEHIlATGSYDEHVLLWD 267 55568556************6379**********9 PP == domain 3 score: 8.4 bits; conditional E-value: 0.061 EETTSSEEEEEE.TTSEEEEEE CS WD40 18 fspdgawlasGs.dDgtvriWd 38 s d+++la++s +D+ +++W+ sp|Q9CYU6|DPH7_MOUSE 434 QSFDNSLLATCSfYDHVLHLWK 455 5789999**99768*******6 PP >> sp|P59235|NUP43_MOUSE Nucleoporin Nup43 OS=Mus musculus OX=10090 GN=Nup43 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 2.6 0.0 4.1 3.6e+02 7 29 .. 71 93 .. 65 110 .. 0.81 2 ! 18.4 0.1 4.2e-05 0.0036 6 38 .] 212 246 .. 207 246 .. 0.83 3 ? 8.9 0.2 0.044 3.8 7 38 .] 257 290 .. 252 290 .. 0.75 Alignments for each domain: == domain 1 score: 2.6 bits; conditional E-value: 4.1 EESSSSEEEEEEETTSSEEEEEE CS WD40 7 ltGHssvtslafspdgawlasGs 29 ++ H++v +l+f + + +a++s sp|P59235|NUP43_MOUSE 71 IRHHGDVMDLQFFDQERIVAASS 93 567899****9999999998777 PP == domain 2 score: 18.4 bits; conditional E-value: 4.2e-05 EEESS.SSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawla.sGsdDgtvriWd 38 +ltG + ++++ +pd++ ++ +G+ Dg + iWd sp|P59235|NUP43_MOUSE 212 SLTGDrVPLHCVDRHPDQQHVVaTGGQDGMLSIWD 246 5677755679**********75499*********9 PP == domain 3 score: 8.9 bits; conditional E-value: 0.044 EESS.SSEEEEEEETTSSE.EEEEETTSEEEEEE CS WD40 7 ltGH.ssvtslafspdgaw.lasGsdDgtvriWd 38 l++H + + f+p+++ l+++s+Dg++ Wd sp|P59235|NUP43_MOUSE 257 LKAHeAEMWEVHFHPSNPDhLFTCSEDGSLWHWD 290 6788666777887777777356***********8 PP >> sp|Q80W47|WIPI2_MOUSE WD repeat domain phosphoinositide-interacting protein 2 OS=Mus musculus OX=10090 GN=Wipi2 PE=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 8.3 0.0 0.064 5.5 8 34 .. 181 208 .. 176 209 .. 0.90 2 ? 6.2 0.0 0.3 26 12 32 .. 232 252 .. 217 258 .. 0.77 3 ? 5.1 0.0 0.69 59 7 38 .] 309 340 .. 303 340 .. 0.69 Alignments for each domain: == domain 1 score: 8.3 bits; conditional E-value: 0.064 ESS.SSEEEEEEETTSSEEEEEETTSEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtv 34 +H s+ +laf+ +g+ la++s++gtv sp|Q80W47|WIPI2_MOUSE 181 PAHdSPLAALAFDASGTKLATASEKGTV 208 58988899******************98 PP == domain 2 score: 6.2 bits; conditional E-value: 0.3 SEEEEEEETTSSEEEEEETTS CS WD40 12 svtslafspdgawlasGsdDg 32 s++slafs dg +l+++s sp|Q80W47|WIPI2_MOUSE 232 SICSLAFSMDGMFLSASSNTE 252 489***********8888555 PP == domain 3 score: 5.1 bits; conditional E-value: 0.69 EESSSSEEEEEEETTSSE.......EEEE.ETTSEEEEEE CS WD40 7 ltGHssvtslafspdgaw.......lasG.sdDgtvriWd 38 + GH++++sl + l+ G s Dg +++++ sp|Q80W47|WIPI2_MOUSE 309 FCGHKNICSL------TTiqkiprlLV-GaS-DGYLYMYN 340 679*999999......44444455255.736.**999987 PP >> sp|Q3TJ91|L2GL2_MOUSE Lethal(2) giant larvae protein homolog 2 OS=Mus musculus OX=10090 GN=Llgl2 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.3 1.9 2.5 2.1e+02 17 33 .. 232 253 .. 199 257 .. 0.72 2 ! 16.1 0.0 0.00022 0.019 14 38 .] 426 451 .. 388 451 .. 0.89 Alignments for each domain: == domain 1 score: 3.3 bits; conditional E-value: 2.5 E.....EETTSSEEEEEETTSE CS WD40 17 a.....fspdgawlasGsdDgt 33 + +++dg ++++++ Dg+ sp|Q3TJ91|L2GL2_MOUSE 232 QlenasWQRDGCLIVTCHSDGS 253 244555***********88*98 PP == domain 2 score: 16.1 bits; conditional E-value: 0.00022 EEEE.EETTSSEEEEEETTSEEEEEE CS WD40 14 tsla.fspdgawlasGsdDgtvriWd 38 tsla +p ++l++G++Dgtvr+Wd sp|Q3TJ91|L2GL2_MOUSE 426 TSLApPPPQRDLLLTGHEDGTVRFWD 451 566667788899*************9 PP >> sp|Q6PGF3|MED16_MOUSE Mediator of RNA polymerase II transcription subunit 16 OS=Mus musculus OX=10090 GN=Med16 PE=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.8 0.8 1.8e-06 0.00015 4 38 .] 61 97 .. 58 97 .. 0.85 Alignments for each domain: == domain 1 score: 22.8 bits; conditional E-value: 1.8e-06 EEEEE.SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 4 lrtlt.GH.ssvtslafspdgawlasGsdDgtvriWd 38 +++ + GH +t+l ++++g+ l+s++ Dg ++ W+ sp|Q6PGF3|MED16_MOUSE 61 VHSVSsGHsEAITCLEWDQSGSRLLSADADGQIKCWS 97 566544**555****************99*******5 PP >> sp|Q3UJB9|EDC4_MOUSE Enhancer of mRNA-decapping protein 4 OS=Mus musculus OX=10090 GN=Edc4 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.5 0.1 8.3e-05 0.0071 6 37 .. 292 324 .. 287 325 .. 0.87 2 ? 3.1 0.0 2.9 2.5e+02 2 37 .. 335 383 .. 334 384 .. 0.79 Alignments for each domain: == domain 1 score: 17.5 bits; conditional E-value: 8.3e-05 EEESSSSEEEEE...EETTSSEEEEEETTSEEEEE CS WD40 6 tltGHssvtsla...fspdgawlasGsdDgtvriW 37 + +GH t+l+ spdg+ la++s Dg v++W sp|Q3UJB9|EDC4_MOUSE 292 VVKGH--STCLSegaLSPDGTVLATASHDGFVKFW 324 57899..489999999*********999******* PP == domain 2 score: 3.1 bits; conditional E-value: 2.9 EEEEEEESSSS..EEEEEEETTSSE..........EEEEET.TSEEEEE CS WD40 2 qclrtltGHss..vtslafspdgaw..........lasGsd.DgtvriW 37 +cl++++ H++ ++l f+++++ l++G d ++ +++W sp|Q3UJB9|EDC4_MOUSE 335 RCLHEWKPHDGrpLSCLLFCDNHKKqdpevpfwrfLITGADqNRELKMW 383 6999999993357999998888888888888888888996448888888 PP >> sp|Q8BND3|WDR35_MOUSE WD repeat-containing protein 35 OS=Mus musculus OX=10090 GN=Wdr35 PE=1 SV=3 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.9 0.0 0.021 1.8 14 36 .. 18 40 .. 11 40 .. 0.90 2 ? 3.8 0.0 1.8 1.5e+02 6 37 .. 66 98 .. 62 99 .. 0.85 3 ? 3.5 0.1 2.1 1.8e+02 14 38 .] 160 184 .. 142 184 .. 0.85 Alignments for each domain: == domain 1 score: 9.9 bits; conditional E-value: 0.021 EEEEEETTSSEEEEEETTSEEEE CS WD40 14 tslafspdgawlasGsdDgtvri 36 ++++++d+ ++a+G++Dg +++ sp|Q8BND3|WDR35_MOUSE 18 KCISWNKDQGFIACGGEDGLLKV 40 69*****************9986 PP == domain 2 score: 3.8 bits; conditional E-value: 1.8 EEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasGsdDgtvriW 37 l+GH + v + ++ + l++++ +g + +W sp|Q8BND3|WDR35_MOUSE 66 NLEGHsGAVQVVTWNEQYQKLTTSDQNGLIIVW 98 689**555*99989999999*99999*****99 PP == domain 3 score: 3.5 bits; conditional E-value: 2.1 EEEEEETTSSEEEEEETTSEEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriWd 38 +++ +s d++ l+ G+ +g ++i+d sp|Q8BND3|WDR35_MOUSE 160 CHVTWSADSKILLFGMANGEIHIYD 184 7888*******988*99******98 PP >> sp|Q8R3E3|WIPI1_MOUSE WD repeat domain phosphoinositide-interacting protein 1 OS=Mus musculus OX=10090 GN=Wipi1 PE=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 6.6 0.0 0.23 20 5 34 .. 180 210 .. 170 211 .. 0.79 2 ? 4.3 0.0 1.2 1.1e+02 13 34 .. 235 256 .. 219 260 .. 0.73 3 ? 7.5 0.0 0.12 10 7 38 .] 311 342 .. 307 342 .. 0.69 Alignments for each domain: == domain 1 score: 6.6 bits; conditional E-value: 0.23 EEEESS.SSEEEEEEETTSSEEEEEETTSEE CS WD40 5 rtltGH.ssvtslafspdgawlasGsdDgtv 34 t+ +H + ++ f+++g+ las+s++gtv sp|Q8R3E3|WIPI1_MOUSE 180 CTIAAHeGTLAAITFNSSGSKLASASEKGTV 210 44557766677888***************98 PP == domain 2 score: 4.3 bits; conditional E-value: 1.2 EEEEEEETTSSEEEEEETTSEE CS WD40 13 vtslafspdgawlasGsdDgtv 34 ++sl fs d+++l+++s tv sp|Q8R3E3|WIPI1_MOUSE 235 ISSLVFSMDSQFLCASSNTETV 256 88999********988855555 PP == domain 3 score: 7.5 bits; conditional E-value: 0.12 EESSSSEEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 7 ltGHssvtsla.fspdgawlasGsdDgtvriWd 38 ++G+++++ l+ ++ ++l+++s Dg+++i++ sp|Q8R3E3|WIPI1_MOUSE 311 FSGQKNICTLStIQKLPRLLVASS-DGHLYIYN 342 667767777754333344578888.******97 PP >> sp|Q8K1X1|WDR11_MOUSE WD repeat-containing protein 11 OS=Mus musculus OX=10090 GN=Wdr11 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 1.6 0.0 8.8 7.5e+02 2 38 .] 52 99 .. 51 99 .. 0.67 2 ? 1.4 0.0 9.9 8.5e+02 25 37 .. 373 383 .. 353 384 .. 0.74 3 ? 9.8 0.2 0.021 1.8 9 38 .] 707 735 .. 700 735 .. 0.81 4 ? 4.9 0.3 0.75 65 13 36 .. 797 819 .. 783 819 .. 0.81 Alignments for each domain: == domain 1 score: 1.6 bits; conditional E-value: 8.8 EEEEEEESS.SSEEEEEEETTSSE................EEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgaw................lasGsdDgtvriWd 38 q+l++l+ H ++ ++ w las++ g++ +Wd sp|Q8K1X1|WDR11_MOUSE 52 QTLQVLEKHkADIVKVR------WarenyhhnigspyclrLASADVTGKIIVWD 99 56788888866688885......33333335555555555999999*******8 PP == domain 2 score: 1.4 bits; conditional E-value: 9.9 EEEEETTSEEEEE CS WD40 25 lasGsdDgtvriW 37 l+ s Dg v+iW sp|Q8K1X1|WDR11_MOUSE 373 LI-VS-DGRVMIW 383 44.48.******* PP == domain 3 score: 9.8 bits; conditional E-value: 0.021 SS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtvriWd 38 G +s+t++a+ d l G++Dg++ +Wd sp|Q8K1X1|WDR11_MOUSE 707 GSmGSITCIAWKGDTLVL--GDMDGNLNFWD 735 56567****777776666..*99*******9 PP == domain 4 score: 4.9 bits; conditional E-value: 0.75 EEEEEEETTSSEEEEEETTSEEEE CS WD40 13 vtslafspdgawlasGsdDgtvri 36 + +++++ + + +++ sdDg +r+ sp|Q8K1X1|WDR11_MOUSE 797 ILDVDWCTSDKVILA-SDDGCIRV 819 889999999999995.66****97 PP >> tr|B2RY71|B2RY71_MOUSE WD repeat domain 63 OS=Mus musculus OX=10090 GN=Wdr63 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 8.6 0.0 0.052 4.5 11 38 .] 401 429 .. 392 429 .. 0.85 2 ! 14.5 0.1 0.00072 0.062 11 38 .] 508 527 .. 498 527 .. 0.87 Alignments for each domain: == domain 1 score: 8.6 bits; conditional E-value: 0.052 SSEEEEEEETTSSEEEEEE.TTSEEEEEE CS WD40 11 ssvtslafspdgawlasGs.dDgtvriWd 38 +++ ++ f+p+ + +++G+ +g + +Wd tr|B2RY71|B2RY71_MOUSE 401 DDIFCFEFCPSDPNIIAGGcINGQIVLWD 429 4699***********999626*******9 PP == domain 2 score: 14.5 bits; conditional E-value: 0.00072 SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 11 ssvtslafspdgawlasGsdDgtvriWd 38 s+++++ l+++s D+t+ +Wd tr|B2RY71|B2RY71_MOUSE 508 SGINCQ--------LVTCSADCTICFWD 527 56****........*************9 PP >> sp|Q9CWR1|WDR73_MOUSE WD repeat-containing protein 73 OS=Mus musculus OX=10090 GN=Wdr73 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 6.7 0.0 0.21 18 14 38 .] 289 304 .. 258 304 .. 0.77 2 ! 11.3 0.3 0.0075 0.64 3 38 .] 317 364 .. 315 364 .. 0.71 Alignments for each domain: == domain 1 score: 6.7 bits; conditional E-value: 0.21 EEEEEETTSSEEEEEETTSEEEEEE CS WD40 14 tslafspdgawlasGsdDgtvriWd 38 ++l +sG Dgtv i+d sp|Q9CWR1|WDR73_MOUSE 289 NCL--------AISGF-DGTVQIYD 304 334........66888.******98 PP == domain 2 score: 11.3 bits; conditional E-value: 0.0075 EEEEEESS...SS........EEEEEEETTSSE..EEEEETTSEEEEEE CS WD40 3 clrtltGH...ss........vtslafspdgaw..lasGsdDgtvriWd 38 +l t +GH ++ vt ++p ++ l+++s D ++++Wd sp|Q9CWR1|WDR73_MOUSE 317 PLFTHKGHiflDGndvdsaplVTTHTWHPRKPRtlLSAAS-DSSLHVWD 364 6667778865522456677777888788888889555668.*******9 PP >> sp|Q8BGZ3|DCA12_MOUSE DDB1- and CUL4-associated factor 12 OS=Mus musculus OX=10090 GN=Dcaf12 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 5.0 0.0 0.72 62 11 31 .. 141 160 .. 132 163 .. 0.82 2 ? 10.1 0.8 0.017 1.5 8 37 .. 181 210 .. 173 211 .. 0.75 3 ? 1.9 0.0 7.1 6.1e+02 13 38 .] 255 280 .. 236 280 .. 0.80 Alignments for each domain: == domain 1 score: 5.0 bits; conditional E-value: 0.72 SSEEEEEEETTSSEEEEEETT CS WD40 11 ssvtslafspdgawlasGsdD 31 ++++++ +p+ ++la+G+ D sp|Q8BGZ3|DCA12_MOUSE 141 CGIHAIELNPSRTLLATGG-D 160 4599999************.5 PP == domain 2 score: 10.1 bits; conditional E-value: 0.017 ESS.SSEEEEEEETTSSE.....EEEEETTSEEEEE CS WD40 8 tGH.ssvtslafspdgaw.....lasGsdDgtvriW 37 +GH +++ s+ aw +sGs+Dg+ +W sp|Q8BGZ3|DCA12_MOUSE 181 DGHkDWIFSI------AWindtmAVSGSRDGSMGLW 210 59*666****......7744443369******9999 PP == domain 3 score: 1.9 bits; conditional E-value: 7.1 EEEEEEETTSSEEEEE..ETTSEEEEEE CS WD40 13 vtslafspdgawlasG..sdDgtvriWd 38 v++laf+ ++ l G s Dg ++W+ sp|Q8BGZ3|DCA12_MOUSE 255 VRALAFNNKNKEL--GavSLDGYFHLWK 280 9999999999998..43367*******6 PP >> sp|Q3TZ89|SC31B_MOUSE Protein transport protein Sec31B OS=Mus musculus OX=10090 GN=Sec31b PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 12.5 0.0 0.0032 0.27 10 38 .] 120 150 .. 113 150 .. 0.75 2 ? 6.3 0.0 0.28 24 2 38 .] 251 289 .. 250 289 .. 0.80 Alignments for each domain: == domain 1 score: 12.5 bits; conditional E-value: 0.0032 S.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 10 H.ssvtsla.fspdgawlasGsdDgtvriWd 38 H + v++l+ ++ g++lasG D + iWd sp|Q3TZ89|SC31B_MOUSE 120 HtGAVRALDfNPFQGNLLASGASDSEIFIWD 150 64459***955555555789955*******9 PP == domain 2 score: 6.3 bits; conditional E-value: 0.28 EEEEEEESS.SSEEEEE.EETTSSEEEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtsla.fspdgawlasGsdDgtvriWd 38 ++l++l+ H ++ s++ ++ d +l+s +D + W+ sp|Q3TZ89|SC31B_MOUSE 251 SPLKVLESHsRGILSMSwNQADAELLLSTAKDSQIFCWN 289 58999****555****866666666789999*******8 PP >> sp|Q9R0D8|WDR54_MOUSE WD repeat-containing protein 54 OS=Mus musculus OX=10090 GN=Wdr54 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 4.8 0.0 0.86 74 6 37 .. 159 196 .. 154 197 .. 0.68 2 ? 2.7 0.0 3.8 3.2e+02 16 38 .] 224 238 .. 214 238 .. 0.80 3 ? 6.0 0.0 0.35 30 8 38 .] 249 280 .. 243 280 .. 0.75 Alignments for each domain: == domain 1 score: 4.8 bits; conditional E-value: 0.86 EEESS.SSEEEEE......EETTSSE....EEEEETTSEEEEE CS WD40 6 tltGH.ssvtsla......fspdgaw....lasGsdDgtvriW 37 +l GH +++t++a +++++d g + +W sp|Q9R0D8|WDR54_MOUSE 159 ELAGHqTPITDIAteraqgQ-----DgvadMVTADDSGVLCVW 196 577**999****65544333.....044454578888888888 PP == domain 2 score: 2.7 bits; conditional E-value: 3.8 EEEETTSSEEEEEETTSEEEEEE CS WD40 16 lafspdgawlasGsdDgtvriWd 38 + +a+G +g vr++d sp|Q9R0D8|WDR54_MOUSE 224 I--------VAAGYGNGQVRLYD 238 3........889955******98 PP == domain 3 score: 6.0 bits; conditional E-value: 0.35 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 ++H +++l+ p+ l+s+ +D v+iW+ sp|Q9R0D8|WDR54_MOUSE 249 SAHaRTISALDLAPEVGKLLSAAEDTFVHIWK 280 688555999966666666889999*******6 PP >> sp|A2AC93|DNAI2_MOUSE Dynein intermediate chain 2, axonemal OS=Mus musculus OX=10090 GN=Dnai2 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 1.5 0.0 9.1 7.8e+02 14 24 .. 166 176 .. 157 202 .. 0.79 2 ? 3.6 0.1 2.1 1.8e+02 24 38 .] 279 293 .. 253 293 .. 0.66 3 ? 9.7 0.0 0.023 2 3 38 .] 356 392 .. 354 392 .. 0.75 4 ? 1.7 0.2 8.3 7.1e+02 16 38 .] 407 436 .. 402 436 .. 0.80 5 ? 1.9 0.0 7.1 6.1e+02 13 29 .. 455 471 .. 446 475 .. 0.85 Alignments for each domain: == domain 1 score: 1.5 bits; conditional E-value: 9.1 EEEEEETTSSE CS WD40 14 tslafspdgaw 24 t+l+++pdg+ sp|A2AC93|DNAI2_MOUSE 166 THLSWHPDGNR 176 7999*****97 PP == domain 2 score: 3.6 bits; conditional E-value: 2.1 EEEEEETTSEEEEEE CS WD40 24 wlasGsdDgtvriWd 38 +s+s Dg v+ Wd sp|A2AC93|DNAI2_MOUSE 279 ECFSASTDGQVMWWD 293 3456777*******9 PP == domain 3 score: 9.7 bits; conditional E-value: 0.023 EEEEEESS.SSEEEEE.EETTSSE.EEEEETTSEEEEEE CS WD40 3 clrtltGH.ssvtsla.fspdgaw.lasGsdDgtvriWd 38 + t+ GH +++++l+ + p + +++ + D t riW+ sp|A2AC93|DNAI2_MOUSE 356 IVCTFYGHhGPIYALQrN-PFYPKnFLTVG-DWTARIWS 392 678999**999****963.33333456789.*******5 PP == domain 4 score: 1.7 bits; conditional E-value: 8.3 EEEETTSSE.......EEEEETTSEEEEEE CS WD40 16 lafspdgaw.......lasGsdDgtvriWd 38 +a+ +dgaw +++ +Dgt+ iWd sp|A2AC93|DNAI2_MOUSE 407 MAYLSDGAWspvrpavFFTTKMDGTLDIWD 436 5677888998888886668866*******9 PP == domain 5 score: 1.9 bits; conditional E-value: 7.1 EEEEEEETTSSEEEEEE CS WD40 13 vtslafspdgawlasGs 29 +l+++++g ++a+Gs sp|A2AC93|DNAI2_MOUSE 455 LFCLRVQDNGCLIACGS 471 56999*********998 PP >> sp|Q5RJG1|NOL10_MOUSE Nucleolar protein 10 OS=Mus musculus OX=10090 GN=Nol10 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 7.4 0.0 0.12 11 13 38 .] 54 81 .. 47 81 .. 0.85 2 ? 6.5 0.0 0.25 21 12 38 .] 271 299 .. 262 299 .. 0.82 Alignments for each domain: == domain 1 score: 7.4 bits; conditional E-value: 0.12 E.EEEEEETTSSEE.EEEETTSEEEEEE CS WD40 13 v.tslafspdgawl.asGsdDgtvriWd 38 v t +++s+dg+++ a+G++++ vr +d sp|Q5RJG1|NOL10_MOUSE 54 VcTTIKVSKDGQYIlATGTYKPRVRCYD 81 558899*******6369999*****998 PP == domain 2 score: 6.5 bits; conditional E-value: 0.25 S...EEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 s...vtslafspdgawlasGsdDgtvriWd 38 + s+ f+++ ++++s++ + v++W+ sp|Q5RJG1|NOL10_MOUSE 271 YglpIKSVHFQDSLDLVLSAD-SRIVKMWN 299 235599999*********878.*******8 PP >> sp|Q8CCN5|BCAS3_MOUSE Breast carcinoma-amplified sequence 3 homolog OS=Mus musculus OX=10090 GN=Bcas3 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 12.1 0.1 0.004 0.34 4 34 .. 344 378 .. 342 380 .. 0.84 2 ? 5.4 0.3 0.53 46 8 28 .. 398 423 .. 391 432 .. 0.72 Alignments for each domain: == domain 1 score: 12.1 bits; conditional E-value: 0.004 EEEEESS.SSEEEEEEETTSSEEEE....EETTSEE CS WD40 4 lrtltGH.ssvtslafspdgawlas....GsdDgtv 34 + ++ +H ++v+++af+ +g +l++ G+ D +v sp|Q8CCN5|BCAS3_MOUSE 344 VAHFPAHeKPVCCMAFNTSGMLLVTtdtlGH-DFHV 378 6799*******************98555556.8776 PP == domain 2 score: 5.4 bits; conditional E-value: 0.53 ESS.SS....EEEEEEETTSSEEEEE CS WD40 8 tGH.ss....vtslafspdgawlasG 28 t H + v +++fs+d +w++ + sp|Q8CCN5|BCAS3_MOUSE 398 TLHrGEteakVQDICFSHDCRWVVVS 423 4454224567************9854 PP >> sp|Q3UGF1|WDR19_MOUSE WD repeat-containing protein 19 OS=Mus musculus OX=10090 GN=Wdr19 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.4 0.0 2.3 2e+02 21 38 .] 25 42 .. 19 42 .. 0.84 2 ? 1.9 0.1 6.9 5.9e+02 10 38 .] 56 83 .. 46 83 .. 0.78 3 ? 6.4 0.0 0.25 22 8 38 .] 272 302 .. 265 302 .. 0.82 Alignments for each domain: == domain 1 score: 3.4 bits; conditional E-value: 2.3 TSSEEE.EEETTSEEEEEE CS WD40 21 dgawla.sGsdDgtvriWd 38 +g++la +G D v+i+d sp|Q3UGF1|WDR19_MOUSE 25 SGNYLAvTGA-DYIVKIFD 42 7899974777.******98 PP == domain 2 score: 1.9 bits; conditional E-value: 6.9 SSSEEEEEEETTSSEEE.EEETTSEEEEEE CS WD40 10 Hssvtslafspdgawla.sGsdDgtvriWd 38 +v +++++dg+ la + + +++Wd sp|Q3UGF1|WDR19_MOUSE 56 N-CV-TMDWDKDGDILAvIAEKSSCIYLWD 83 4.34.667*******974678899999998 PP == domain 3 score: 6.4 bits; conditional E-value: 0.25 ESS.SSEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 8 tGH.ssvtslafspdgawlasGsdDgtvriWd 38 + H ++ ts+a s+ + a+++ D+ ++i d sp|Q3UGF1|WDR19_MOUSE 272 RDHkDNLTSVALSQTLNKAATCG-DNCIKIHD 302 579555*****************.*****976 PP >> tr|Q3UH45|Q3UH45_MOUSE Tectonin beta-propeller repeat-containing 2 OS=Mus musculus OX=10090 GN=Tecpr2 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 14.0 0.0 0.001 0.086 9 34 .. 125 151 .. 115 152 .. 0.85 Alignments for each domain: == domain 1 score: 14.0 bits; conditional E-value: 0.001 SS.SSEEEEEEETTSSEEEEEETTSEE CS WD40 9 GH.ssvtslafspdgawlasGsdDgtv 34 H +s+t+la+sp+g l+sG+d+g++ tr|Q3UH45|Q3UH45_MOUSE 125 VHkTSITALAWSPNGMKLFSGDDKGKI 151 69888****************988876 PP >> tr|Q8CFE8|Q8CFE8_MOUSE F-box and WD-40 domain protein 17 OS=Mus musculus OX=10090 GN=Fbxw17 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 7.0 0.1 0.16 14 8 38 .] 93 133 .. 88 133 .. 0.57 2 ? 4.7 0.2 0.89 76 10 28 .. 233 250 .. 225 255 .. 0.75 Alignments for each domain: == domain 1 score: 7.0 bits; conditional E-value: 0.16 ESSSS.EEEEE........EETTSSEEEEE.ETTSEEEEEE CS WD40 8 tGHss.vtsla........fspdgawlasG.sdDgtvriWd 38 +GH++ + la f+ + +++ s D+tvr Wd tr|Q8CFE8|Q8CFE8_MOUSE 93 SGHTGmIDQLAyvspheyrFDEGARSVVCTvSSDCTVRAWD 133 566445655555444444444444445532355*******9 PP == domain 2 score: 4.7 bits; conditional E-value: 0.89 SSSEEEEEEETTSSEEEEE CS WD40 10 HssvtslafspdgawlasG 28 Hssv sl spd +w++ + tr|Q8CFE8|Q8CFE8_MOUSE 233 HSSV-SLTCSPDTQWVFVS 250 8889.9999******8643 PP >> sp|A2RT67|DEND3_MOUSE DENN domain-containing protein 3 OS=Mus musculus OX=10090 GN=Dennd3 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.6 0.1 0.026 2.2 2 38 .] 1059 1098 .. 1058 1098 .. 0.78 2 ? 1.5 0.0 9.4 8.1e+02 6 38 .] 1238 1272 .. 1234 1272 .. 0.74 Alignments for each domain: == domain 1 score: 9.6 bits; conditional E-value: 0.026 EEEEEEESS.SSEEEEE..EETTSSE..EEEEETTSEEEEEE CS WD40 2 qclrtltGH.ssvtsla..fspdgaw..lasGsdDgtvriWd 38 +c + lt H s+vt+la + ++ + s+s Dgtv W+ sp|A2RT67|DEND3_MOUSE 1059 SCNKQLTDHrSPVTGLAvhN--GKKPseIYSCSLDGTVIAWN 1098 688999***999****8542..222245889*******9997 PP == domain 2 score: 1.5 bits; conditional E-value: 9.4 EEESS.SSEEEEEEETTSSEEEEE.E.TTSEEEEEE CS WD40 6 tltGH.ssvtslafspdgawlasG.s.dDgtvriWd 38 +l +H + v+ l s + ++++sG + + g++ iW+ sp|A2RT67|DEND3_MOUSE 1238 ELVAHlDTVRTL-CSAEDRYVLSGaGqEEGKIAIWK 1272 677898889888.66666777788445799999995 PP >> sp|E9PY46|IF140_MOUSE Intraflagellar transport protein 140 homolog OS=Mus musculus OX=10090 GN=Ift140 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.2 0.1 2.7 2.3e+02 10 37 .. 102 130 .. 93 131 .. 0.75 2 ? 7.8 0.0 0.097 8.4 12 38 .] 326 352 .. 313 352 .. 0.86 Alignments for each domain: == domain 1 score: 3.2 bits; conditional E-value: 2.7 S.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 10 H.ssvtslafspdgawlasGsdDgtvriW 37 H +++ l++s +g+ l+sG++ g + +W sp|E9PY46|IF140_MOUSE 102 HtTDIAILSWSTSGSCLVSGDKLGVLLLW 130 656676677*********99887777777 PP == domain 2 score: 7.8 bits; conditional E-value: 0.097 SEEEEEEETTSSEEEEEETTSEEEEEE CS WD40 12 svtslafspdgawlasGsdDgtvriWd 38 s+++++f++ + +la+G+ +g v +W+ sp|E9PY46|IF140_MOUSE 326 SINCVCFCKAKGLLAAGTNKGRVAMWK 352 5****************99****9995 PP >> sp|Q80U93|NU214_MOUSE Nuclear pore complex protein Nup214 OS=Mus musculus OX=10090 GN=Nup214 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.0 0.0 0.0095 0.81 12 35 .. 194 217 .. 185 219 .. 0.86 Alignments for each domain: == domain 1 score: 11.0 bits; conditional E-value: 0.0095 SEEEEEEETTSSEEEEEETTSEEE CS WD40 12 svtslafspdgawlasGsdDgtvr 35 +vt++++sp g+ la G +gtv sp|Q80U93|NU214_MOUSE 194 GVTCVCWSPKGKQLAVGKQNGTVV 217 5**************998899986 PP >> sp|Q6P7W2|SHKB1_MOUSE SH3KBP1-binding protein 1 OS=Mus musculus OX=10090 GN=Shkbp1 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 6.7 0.0 0.22 19 2 37 .. 421 456 .. 420 457 .. 0.79 2 ? 2.9 0.0 3.2 2.8e+02 9 38 .] 528 577 .. 522 577 .. 0.78 Alignments for each domain: == domain 1 score: 6.7 bits; conditional E-value: 0.22 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 q+ +t++ H s+vt + +++++++ + d+++vr W sp|Q6P7W2|SHKB1_MOUSE 421 QLFQTFSVHrSPVTKI-MLSEKHLISVCADNNHVRTW 456 67899****999**99.5555555666889*****99 PP == domain 2 score: 2.9 bits; conditional E-value: 3.2 SS..SSEEEEEEETTSSE..................EEEEETTSEEEEEE CS WD40 9 GH..ssvtslafspdgaw..................lasGsdDgtvriWd 38 G+ +sv+s++ sp a+ l++G +g++ +Wd sp|Q6P7W2|SHKB1_MOUSE 528 GQrvCSVRSVDGSPTTAFtvlecegsrrlgsrprryLLTGQANGSLAMWD 577 66656699999888888888888888888888888888995599999998 PP >> sp|Q9CR39|WIPI3_MOUSE WD repeat domain phosphoinositide-interacting protein 3 OS=Mus musculus OX=10090 GN=Wdr45b PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.4 0.0 2.3 1.9e+02 8 34 .. 182 209 .. 175 214 .. 0.81 2 ? 10.7 0.3 0.012 0.99 9 37 .. 227 257 .. 210 257 .. 0.77 Alignments for each domain: == domain 1 score: 3.4 bits; conditional E-value: 2.3 ESSSSE.EEEEEETTSSEEEEEETTSEE CS WD40 8 tGHssv.tslafspdgawlasGsdDgtv 34 +H +v +++a + g+ +a++s++gt+ sp|Q9CR39|WIPI3_MOUSE 182 PAHEGVlSCIALNLQGTRIATASEKGTL 209 57977779**99999999****987775 PP == domain 2 score: 10.7 bits; conditional E-value: 0.012 SSSS...EEEEEEETTSSEEEEEETTSEEEEE CS WD40 9 GHss...vtslafspdgawlasGsdDgtvriW 37 G ++++ f++d ++++ +sd gtv+i+ sp|Q9CR39|WIPI3_MOUSE 227 GS-QaanIYCINFNQDASLICVSSDHGTVHIF 257 44.0345*************999999999985 PP >> sp|Q9CWF6|BBS2_MOUSE Bardet-Biedl syndrome 2 protein homolog OS=Mus musculus OX=10090 GN=Bbs2 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 7.0 0.1 0.17 14 6 37 .. 157 191 .. 149 192 .. 0.81 Alignments for each domain: == domain 1 score: 7.0 bits; conditional E-value: 0.17 EEESSSSEEEEE...EETTSSE.EEEEETTSEEEEE CS WD40 6 tltGHssvtsla...fspdgaw.lasGsdDgtvriW 37 t tG +v+sla f+ dg+ l+ Gs+D +r++ sp|Q9CWF6|BBS2_MOUSE 157 TVTGD-NVHSLAlcdFDGDGKTeLLVGSEDFDIRVF 191 45555.59999998999999999777********97 PP >> sp|Q8BFX3|KCTD3_MOUSE BTB/POZ domain-containing protein KCTD3 OS=Mus musculus OX=10090 GN=Kctd3 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 6.3 0.0 0.29 25 2 37 .. 413 448 .. 412 449 .. 0.79 2 ? 4.6 0.0 0.96 82 22 38 .] 553 569 .. 526 569 .. 0.84 Alignments for each domain: == domain 1 score: 6.3 bits; conditional E-value: 0.29 EEEEEEESS.SSEEEEEEETTSSEEEEEETTSEEEEE CS WD40 2 qclrtltGH.ssvtslafspdgawlasGsdDgtvriW 37 q+ +t+t H s+vt + +++++++ + d+++vr W sp|Q8BFX3|KCTD3_MOUSE 413 QLFQTFTVHrSPVTKI-MLSEKHLVSVCADNNHVRTW 448 67899****999**99.5555555666889****988 PP == domain 2 score: 4.6 bits; conditional E-value: 0.96 SSEEEEEETTSEEEEEE CS WD40 22 gawlasGsdDgtvriWd 38 ++l++G+ +g++ +Wd sp|Q8BFX3|KCTD3_MOUSE 553 RRYLFTGHTNGSIQMWD 569 56899**99*******9 PP Internal pipeline statistics summary: ------------------------------------- Query model(s): 1 (38 nodes) Target sequences: 22289 (11757923 residues searched) Passed MSV filter: 795 (0.0356678); expected 445.8 (0.02) Passed bias filter: 699 (0.0313608); expected 445.8 (0.02) Passed Vit filter: 290 (0.0130109); expected 22.3 (0.001) Passed Fwd filter: 262 (0.0117547); expected 0.2 (1e-05) Initial search space (Z): 22289 [actual number of targets] Domain search space (domZ): 260 [number of targets reported over threshold] # CPU time: 0.30u 0.01s 00:00:00.31 Elapsed: 00:00:00.11 # Mc/sec: 4061.83 // [ok]