| ont-Crg-CapTrap_HpreCap_0+_A54...1 |
| ont-Crg-CapTrap_HpreCap_0+_Bra...1 |
| ont-Crg-CapTrap_HpreCap_0+_Bra...1 |
| ont-Crg-CapTrap_HpreCap_0+_Bra...1 |
| ont-Crg-CapTrap_HpreCap_0+_Bra...1 |
| ont-Crg-CapTrap_HpreCap_0+_Bra...1 |
| ont-Crg-CapTrap_HpreCap_0+_Bra...1 |
| ont-Crg-CapTrap_HpreCap_0+_Bra...1 |
| ont-Crg-CapTrap_HpreCap_0+_Emb...1 |
| ont-Crg-CapTrap_HpreCap_0+_Emb...1 |
| ont-Crg-CapTrap_HpreCap_0+_Emb...1 |
| ont-Crg-CapTrap_HpreCap_0+_Hea...1 |
| ont-Crg-CapTrap_HpreCap_0+_Hea...1 |
| ont-Crg-CapTrap_HpreCap_0+_HEK...1 |
| ont-Crg-CapTrap_HpreCap_0+_HEK...1 |
| ont-Crg-CapTrap_HpreCap_0+_HEK...1 |
| ont-Crg-CapTrap_HpreCap_0+_HEK...1 |
| ont-Crg-CapTrap_HpreCap_0+_HEK...1 |
| ont-Crg-CapTrap_HpreCap_0+_HEK...1 |
| ont-Crg-CapTrap_HpreCap_0+_HEK...1 |
| ont-Crg-CapTrap_HpreCap_0+_HEK...1 |
| ont-Crg-CapTrap_HpreCap_0+_HEK...1 |
| ont-Crg-CapTrap_HpreCap_0+_HEK...1 |
| ont-Crg-CapTrap_HpreCap_0+_HEK...1 |
| ont-Crg-CapTrap_HpreCap_0+_HEK...1 |
| ont-Crg-CapTrap_HpreCap_0+_HEK...1 |
| ont-Crg-CapTrap_HpreCap_0+_iPS...1 |
| ont-Crg-CapTrap_HpreCap_0+_Liv...1 |
| ont-Crg-CapTrap_HpreCap_0+_Mix...1 |
| ont-Crg-CapTrap_HpreCap_0+_Mix...1 |
| ont-Crg-CapTrap_HpreCap_0+_Mix...1 |
| ont-Crg-CapTrap_HpreCap_0+_WBl...1 |
| ont-Crg-CapTrap_HpreCap_0+_WTC...1 |
| ont-Crg-CapTrap_HpreCap_0+_WTC...1 |
| ont-Crg-CapTrap_HpreCap_0+_WTC...1 |
| ont-Crg-CapTrap_HpreCap_1+_HEK...1 |
| ont-Crg-CapTrap_HpreCap_1+_HEK...1 |
| ont-Crg-CapTrap_Hv3_0+_Brain01...1 |
| ont-Crg-CapTrap_Hv3_0+_Brain03...1 |
| ont-Crg-CapTrap_Hv3_0+_CpoolA0...1 |
| ont-Crg-CapTrap_Hv3_0+_EmbBrai...1 |
| ont-Crg-CapTrap_Hv3_0+_EmbHear...1 |
| ont-Crg-CapTrap_Hv3_0+_EmbLive...1 |
| ont-Crg-CapTrap_Hv3_0+_Heart02...1 |
| ont-Crg-CapTrap_Hv3_0+_HEK293T...1 |
| ont-Crg-CapTrap_Hv3_0+_HEK293T...1 |
| ont-Crg-CapTrap_Hv3_0+_HEK293T...1 |
| ont-Crg-CapTrap_Hv3_0+_iPSC01R...1 |
| ont-Crg-CapTrap_Hv3_0+_Liver01...1 |
| ont-Crg-CapTrap_Hv3_0+_Placent...1 |
| ont-Crg-CapTrap_Hv3_0+_Testis0...1 |
| ont-Crg-CapTrap_Hv3_0+_Testis0...1 |
| ont-Crg-CapTrap_Hv3_0+_Testis0...1 |
| ont-Crg-CapTrap_Hv3_0+_Testis0...1 |
| ont-Crg-CapTrap_Hv3_0+_Testis0...1 |
| ont-Crg-CapTrap_Hv3_0+_TpoolA0...1 |
| ont-Crg-CapTrap_Hv3_0+_WBlood0...1 |
| ont-Crg-CapTrap_MpreCap_0+_Bra...1 |
| ont-Crg-CapTrap_MpreCap_0+_Bra...1 |
| ont-Crg-CapTrap_MpreCap_0+_Bra...1 |
| ont-Crg-CapTrap_MpreCap_0+_Bra...1 |
| ont-Crg-CapTrap_MpreCap_0+_Bra...1 |
| ont-Crg-CapTrap_MpreCap_0+_Bra...1 |
| ont-Crg-CapTrap_MpreCap_0+_Bra...1 |
| ont-Crg-CapTrap_MpreCap_0+_Emb...1 |
| ont-Crg-CapTrap_MpreCap_0+_Emb...1 |
| ont-Crg-CapTrap_MpreCap_0+_Emb...1 |
| ont-Crg-CapTrap_MpreCap_0+_Emb...1 |
| ont-Crg-CapTrap_MpreCap_0+_F12...1 |
| ont-Crg-CapTrap_MpreCap_0+_F12...1 |
| ont-Crg-CapTrap_MpreCap_0+_F12...1 |
| ont-Crg-CapTrap_MpreCap_0+_Hea...1 |
| ont-Crg-CapTrap_MpreCap_0+_Liv...1 |
| ont-Crg-CapTrap_MpreCap_0+_WBl...1 |
| ont-Crg-CapTrap_Mv2_0+_Brain01...1 |
| ont-Crg-CapTrap_Mv2_0+_Brain01...1 |
| ont-Crg-CapTrap_Mv2_0+_Brain01...1 |
| ont-Crg-CapTrap_Mv2_0+_EmbBrai...1 |
| ont-Crg-CapTrap_Mv2_0+_EmbHear...1 |
| ont-Crg-CapTrap_Mv2_0+_EmbLive...1 |
| ont-Crg-CapTrap_Mv2_0+_EmbSC01...1 |
| ont-Crg-CapTrap_Mv2_0+_Heart01...1 |
| ont-Crg-CapTrap_Mv2_0+_Liver01...1 |
| ont-Crg-CapTrap_Mv2_0+_Testis0...1 |
| ont-Crg-CapTrap_Mv2_0+_TpoolB0...1 |
| ont-Crg-CapTrap_Mv2_0+_WBlood0...1 |
| ont-Crg-CapTrapR2C2_HpreCap_0+...1 |
| ont-Crg-CapTrapR2C2_HpreCap_0+...1 |
| ont-Crg-CapTrapR2C2_HpreCap_0+...1 |
| ont-Crg-PcrOnt_HpreCap_0+_BLaE...1 |
| ont-Crg-PcrOnt_HpreCap_0+_BLaE...1 |
| ont-Crg-PcrOnt_HpreCap_0+_BLaE...1 |
| ont-Crg-PcrOnt_HpreCap_0+_BLaE...1 |
| ont-Crg-PcrOnt_HpreCap_0+_BLaE...1 |
| ont-Crg-PcrOnt_HpreCap_0+_BLaE...1 |
| ont-Crg-Rt_HpreCap_0+_HEK293T0...1 |
| ont-Crg-Rt_HpreCap_0+_HEK293T0...1 |
| ont-Crg-Rt_HpreCap_0+_HEK293T0...1 |
| ont-Crg-Rt_HpreCap_0+_HEK293T0...1 |
| ont-Crg-Rt_HpreCap_0+_HEK293T0...1 |
| ont-Crg-Smarter_HpreCap_0+_Bra...1 |
| ont-Crg-Smarter_HpreCap_0+_Hea...1 |
| ont-Crg-Smarter_Hv3_0+_Brain01...1 |
| ont-Crg-Telop_HpreCap_0+_Brain...1 |
| ont-Crg-Telop_HpreCap_0+_Brain...1 |
| ont-Crg-Telop_MpreCap_0+_Brain...1 |
| ont-Crg-Telop_MpreCap_0+_Brain...1 |
| ont-Cshl-CapTrap_HpreCap_0+_Br...1 |
| ont-Cshl-CapTrap_HpreCap_0+_He...1 |
| ont-Cshl-dRNA_HpreCap_0+_Heart...1 |
| ont-Cshl-Smarter_HpreCap_0+_Br...1 |
| ont-Cshl-Smarter_HpreCap_0+_He...1 |
| ont-Ucsc-dRNA_HpreCap_0+_Mix01...1 |
| ont-Ucsc-dRNA_HpreCap_0+_Mix02...1 |
| ont-Ucsc-dRNA_HpreCap_0+_Mix03...1 |
| ont-Ucsc-dRNA_HpreCap_0+_WTC11...1 |
| ont-Ucsc-dRNA_HpreCap_0+_WTC11...1 |
| ont-Ucsc-dRNA_HpreCap_0+_WTC11...1 |
| ont-Ucsc-dRNA_MpreCap_0+_F121-...1 |
| ont-Ucsc-dRNA_MpreCap_0+_F121-...1 |
| ont-Ucsc-dRNA_MpreCap_0+_F121-...1 |
| ont-Ucsc-PcrOnt_HpreCap_1+_Mix...1 |
| ont-Ucsc-PcrOnt_HpreCap_1+_Mix...1 |
| ont-Ucsc-PcrOnt_HpreCap_1+_Mix...1 |
| ont-Ucsc-PcrOnt_HpreCap_1+_WTC...1 |
| ont-Ucsc-PcrOnt_HpreCap_1+_WTC...1 |
| ont-Ucsc-PcrOnt_HpreCap_1+_WTC...1 |
| ont-Ucsc-PcrOnt_MpreCap_1+_F12...1 |
| ont-Ucsc-PcrOnt_MpreCap_1+_F12...1 |
| ont-Ucsc-PcrOnt_MpreCap_1+_F12...1 |
| ont-Ucsc-R2C2_HpreCap_0+_Mix01...1 |
| ont-Ucsc-R2C2_HpreCap_0+_Mix02...1 |
| ont-Ucsc-R2C2_HpreCap_0+_Mix03...1 |
| ont-Ucsc-R2C2_HpreCap_0+_WTC11...1 |
| ont-Ucsc-R2C2_HpreCap_0+_WTC11...1 |
| ont-Ucsc-R2C2_HpreCap_0+_WTC11...1 |
| ont-Ucsc-R2C2_MpreCap_0+_F121-...1 |
| ont-Ucsc-R2C2_MpreCap_0+_F121-...1 |
| ont-Ucsc-R2C2_MpreCap_0+_F121-...1 |
| pacBio-Cshl-CapTrap_HpreCap_0+...1 |
| pacBio-Cshl-CapTrap_HpreCap_0+...1 |
| pacBio-Cshl-Smarter_HpreCap_0+...1 |
| pacBio-Cshl-Smarter_HpreCap_0+...1 |
| pacBioSII-Cshl-CapTrap_HpreCap...1 |
| pacBioSII-Cshl-CapTrap_HpreCap...1 |
| pacBioSII-Cshl-CapTrap_HpreCap...1 |
| pacBioSII-Cshl-CapTrap_HpreCap...1 |
| pacBioSII-Cshl-CapTrap_HpreCap...1 |
| pacBioSII-Cshl-CapTrap_HpreCap...1 |
| pacBioSII-Cshl-CapTrap_HpreCap...1 |
| pacBioSII-Cshl-CapTrap_HpreCap...1 |
| pacBioSII-Cshl-CapTrap_Hv3_0+_...1 |
| pacBioSII-Cshl-CapTrap_Hv3_0+_...1 |
| pacBioSII-Cshl-CapTrap_Hv3_0+_...1 |
| pacBioSII-Cshl-CapTrap_Hv3_0+_...1 |
| pacBioSII-Cshl-CapTrap_Hv3_0+_...1 |
| pacBioSII-Cshl-CapTrap_Hv3_0+_...1 |
| pacBioSII-Cshl-CapTrap_Hv3_0+_...1 |
| pacBioSII-Cshl-CapTrap_Hv3_0+_...1 |
| pacBioSII-Cshl-CapTrap_MpreCap...1 |
| pacBioSII-Cshl-CapTrap_MpreCap...1 |
| pacBioSII-Cshl-CapTrap_MpreCap...1 |
| pacBioSII-Cshl-CapTrap_MpreCap...1 |
| pacBioSII-Cshl-CapTrap_MpreCap...1 |
| pacBioSII-Cshl-CapTrap_MpreCap...1 |
| pacBioSII-Cshl-CapTrap_MpreCap...1 |
| pacBioSII-Cshl-CapTrap_MpreCap...1 |
| pacBioSII-Cshl-CapTrap_Mv2_0+_...1 |
| pacBioSII-Cshl-CapTrap_Mv2_0+_...1 |
| pacBioSII-Cshl-CapTrap_Mv2_0+_...1 |
| pacBioSII-Cshl-CapTrap_Mv2_0+_...1 |
| pacBioSII-Cshl-CapTrap_Mv2_0+_...1 |
| pacBioSII-Cshl-CapTrap_Mv2_0+_...1 |
| pacBioSII-Cshl-CapTrap_Mv2_0+_...1 |
| pacBioSII-Cshl-CapTrap_Mv2_0+_...1 |
| pacBioSII-pacBio-IsoSeq_HpreCa...1 |
| pacBioSII-Uci-CapTrap_HpreCap_...1 |
| pacBioSII-Uci-CapTrap_HpreCap_...1 |
| pacBioSII-Uci-CapTrap_HpreCap_...1 |
| pacBioSII-Uci-CapTrap_HpreCap_...1 |
| pacBioSII-Uci-CapTrap_HpreCap_...1 |
| pacBioSII-Uci-CapTrap_HpreCap_...1 |
| pacBioSII-Uci-CapTrap_MpreCap_...1 |
| pacBioSII-Uci-CapTrap_MpreCap_...1 |
| pacBioSII-Uci-CapTrap_MpreCap_...1 |
| pacBioSII-Uci-SmartSeq2_HpreCa...1 |
| pacBioSII-Uci-SmartSeq2_HpreCa...1 |
| pacBioSII-Uci-SmartSeq2_HpreCa...1 |
| pacBioSII-Uci-SmartSeq2_HpreCa...1 |
| pacBioSII-Uci-SmartSeq2_HpreCa...1 |
| pacBioSII-Uci-SmartSeq2_HpreCa...1 |
| pacBioSII-Uci-SmartSeq2_HpreCa...1 |
| pacBioSII-Uci-SmartSeq2_HpreCa...1 |
| pacBioSII-Uci-SmartSeq2_HpreCa...1 |
| pacBioSII-Uci-SmartSeq2_HpreCa...1 |
| pacBioSII-Uci-SmartSeq2_HpreCa...1 |
| pacBioSII-Uci-SmartSeq2_HpreCa...1 |
| pacBioSII-Uci-SmartSeq2_HpreCa...1 |
| pacBioSII-Uci-SmartSeq2_HpreCa...1 |
| pacBioSII-Uci-SmartSeq2_HpreCa...1 |
| pacBioSII-Uci-SmartSeq2_MpreCa...1 |
| pacBioSII-Uci-SmartSeq2_MpreCa...1 |
| pacBioSII-Uci-SmartSeq2_MpreCa...1 |
| pacBioSII-Uci-SmartSeq2_MpreCa...1 |
| pacBioSII-Uci-SmartSeq2_MpreCa...1 |
| pacBioSII-Uci-SmartSeq2_MpreCa...1 |
| pacBioSII-Uci-SmartSeq2_MpreCa...1 |
| pacBioSII-Uci-SmartSeq2_MpreCa...1 |
| pacBioSII-Uci-SmartSeq2_MpreCa...1 |
| ONT 139 |
| pacBioSI 4 |
| pacBioSII66 |
| Human141 |
| Mouse68 |
| A549 1 |
| AlzhBrain 1 |
| BLaER1 6 |
| Brain 33 |
| CpoolA 1 |
| EmbryoBrain8 |
| EmbryoHeart8 |
| EmbryoLiver8 |
| EmbryoSC 4 |
| F121-9 24 |
| Heart 15 |
| HEK293T 26 |
| iPSC 4 |
| Liver 8 |
| Mix 21 |
| Placenta 1 |
| Testis 6 |
| TpoolA 1 |
| TpoolB 1 |
| WBlood 8 |
| WTC11 24 |
| CapTrap 131 |
| CapTrapR2C23 |
| directRNA 10 |
| IsoSeq 1 |
| PcrOnt 15 |
| R2C2 9 |
| Rt 5 |
| SMARTer 7 |
| SmartSeq2 24 |
| Teloprime 4 |
| 1 |
| E1 RT Lexogen 4 |
| Marathon 6 |
| Maxima 41 |
| None 10 |
| PrimeScript II129 |
| SMART MMLV 9 |
| SMARTScribe 7 |
| SuperScript II2 |
| HpreCap114 |
| Hv3 27 |
| MpreCap48 |
| Mv2 20 |
| 0+189 |
| 1+20 |
| Cytoplasm2 |
| Nucleus 2 |
| Total 205 |
| False33 |
| True 176 |
| False194 |
| True 15 |
| GENCODE 122 |
| GENCODE-BENCHMARK17 |
| LRGASP 69 |
| Other 1 |
| sample_name | biosample_id | date sequenced | FASTQ last modified | seq center | seq platform | species | tissue | library prep | reverse transcriptase | capture design | size fraction | cell fraction | capped spike-ins? | bio rep | tech rep | use_matched_HiSeq | subProject | filter_SJ_Qscore | comments | # reads | median read length | mean read length | max read length (FASTQ) | % mapped reads | # HCGM reads | % HCGM reads | % spliced HCGMs | # merged TMs (min. 2 reads) | merge rate | TM median length | TM max length | SIRV Tx Pr | SIRV Tx Sn | % FL TMs | genomic nts covered | # TM nts over intergenic regions | % TM nts over intergenic regions | # TM nts over CDS regions | % TM nts over CDS regions | # TM nts over UTR regions | % TM nts over UTR regions | # TM nts over exons of noncoding transcripts | % TM nts over exons of noncoding transcripts | # TM nts over exons of pseudogenes | % TM nts over exons of pseudogenes | # TM nts over introns | % TM nts over introns | # novel loci | # novel loci per million mapped reads | % novel loci intergenic | # spliced novel loci | % spliced novel loci | # novel loci FL | % novel loci FL | # novel loci on repeats | % novel loci on repeats | median length all TMs (novel loci) | max length all TMs (novel loci) | median length monoexonic TMs (novel loci) | max length monoexonic TMs (novel loci) | median length spliced TMs (novel loci) | max length spliced TMs (novel loci) | # FL novel loci on repeats | % FL novel loci on repeats | median length all TMs (FL novel loci) | max length all TMs (FL novel loci) | median length monoexonic TMs (FL novel loci) | max length monoexonic TMs (FL novel loci) | median length spliced TMs (FL novel loci) | max length spliced TMs (FL novel loci) | # FL spliced novel loci | # FL spliced novel loci per million mapped reads | % FL spliced novel loci |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ont-Crg-CapTrap_HpreCap_0+_A54901Rep1 | CRG_HScA549_20190107 | 2018-09-03 | 2020-12-05 | Crg | ONT | Human | A549 | CapTrap | PrimeScript II | HpreCap | 0+ | Total | False | 1 | 1 | False | GENCODE | 10 | NA | 1,279,053 | 666 | 785 | 5,900 | 99% | 589,950 | 46% | 93% | 7,939 | 1.35% | 689 | 3,263 | NA | 0% | 65% | 3,769,550 | 55,590 | 1% | 1,626,957 | 43% | 1,743,710 | 46% | 198,360 | 5% | 45,748 | 1% | 99,185 | 3% | 125 | 98 | 41% | 76 | 61% | 30 | 24% | 86 | 69% | 438 | 1,441 | 322 | 1,042 | 516 | 1,441 | 28 | 93% | 488 | 1,225 | 484 | 900 | 489 | 1,225 | 26 | 20 | 87% |
| pacBioSII-pacBio-IsoSeq_HpreCap_0+_AlzhBrain | 2018-09-03 | 2021-07-26 | pacBio | pacBioSII | Human | AlzhBrain | IsoSeq | HpreCap | 0+ | Total | False | 1 | 1 | False | Other | 30 | NA | 3,508,299 | 2,686 | 2,955 | 16,488 | 100% | 2,613,525 | 75% | 74% | 111,206 | 4.26% | 3,305 | 17,900 | NA | 0% | 46% | 173,846,564 | 16,191,728 | 9% | 23,899,198 | 14% | 26,538,871 | 15% | 10,704,140 | 6% | 839,806 | 0% | 95,672,821 | 55% | 18,181 | 5,186 | 17% | 2,607 | 14% | 185 | 1% | 17,986 | 99% | 3,016 | 16,985 | 3,059 | 16,985 | 2,816 | 8,972 | 181 | 98% | 3,006 | 9,123 | 2,956 | 9,123 | 3,032 | 6,319 | 65 | 19 | 35% | ||
| ont-Crg-PcrOnt_HpreCap_0+_BLaER101Rep1 | CRG_CRG0010_BLaER1_H03T | 2021-02-22 | 2021-03-01 | Crg | ONT | Human | BLaER1 | PcrOnt | Maxima | HpreCap | 0+ | Total | False | 1 | 1 | False | GENCODE | 10 | NA | 12,765,278 | 802 | 986 | 14,458 | 90% | 4,902,811 | 43% | 78% | 40,131 | 0.82% | 837 | 8,350 | NA | 0% | 59% | 19,452,561 | 771,940 | 4% | 6,528,680 | 34% | 8,850,816 | 45% | 1,408,804 | 7% | 199,210 | 1% | 1,693,111 | 9% | 1,998 | 173 | 34% | 735 | 37% | 223 | 11% | 1,448 | 72% | 480 | 4,446 | 355 | 3,654 | 576 | 4,446 | 160 | 72% | 620 | 4,419 | 604 | 2,490 | 622 | 4,419 | 105 | 9 | 47% |
| ont-Crg-PcrOnt_HpreCap_0+_BLaER102Rep1 | CRG_CRG0010_BLaER1_H03C | 2021-03-16 | 2021-03-26 | Crg | ONT | Human | BLaER1 | PcrOnt | Maxima | HpreCap | 0+ | Cytoplasm | False | 2 | 1 | False | GENCODE | 10 | NA | 22,628,613 | 677 | 731 | 13,574 | 83% | 9,812,885 | 52% | 64% | 51,904 | 0.53% | 690 | 12,267 | 7% | 69% | 41% | 22,541,087 | 1,221,311 | 5% | 6,461,845 | 29% | 11,325,514 | 50% | 1,400,145 | 6% | 224,048 | 1% | 1,908,224 | 8% | 5,240 | 278 | 35% | 1,050 | 20% | 256 | 5% | 3,746 | 71% | 364 | 3,470 | 313 | 2,836 | 512 | 3,470 | 170 | 66% | 526 | 2,486 | 371 | 2,486 | 602 | 2,250 | 119 | 6 | 46% |
| ont-Crg-PcrOnt_HpreCap_0+_BLaER103Rep1 | CRG_CRG0010_BLaER1_H03N | 2021-03-16 | 2021-03-26 | Crg | ONT | Human | BLaER1 | PcrOnt | Maxima | HpreCap | 0+ | Nucleus | False | 3 | 1 | False | GENCODE | 10 | NA | 23,109,936 | 574 | 698 | 19,637 | 81% | 8,228,705 | 44% | 49% | 73,266 | 0.89% | 665 | 13,942 | 6% | 69% | 23% | 35,862,692 | 2,718,765 | 8% | 7,328,937 | 20% | 13,279,078 | 37% | 3,279,312 | 9% | 289,129 | 1% | 8,967,471 | 25% | 17,671 | 945 | 26% | 2,967 | 17% | 306 | 2% | 13,961 | 79% | 356 | 5,266 | 324 | 3,980 | 512 | 5,266 | 190 | 62% | 459 | 3,114 | 372 | 2,940 | 571 | 3,114 | 87 | 5 | 28% |
| ont-Crg-PcrOnt_HpreCap_0+_BLaER104Rep1 | CRG_CRG0016_BLaER1_H02T | 2021-06-22 | 2021-07-02 | Crg | ONT | Human | BLaER1 | PcrOnt | Maxima | HpreCap | 0+ | Total | False | 4 | 1 | False | GENCODE | 10 | NA | 18,125,217 | 818 | 1,028 | 14,116 | 95% | 8,111,070 | 47% | 83% | 53,305 | 0.66% | 927 | 12,318 | 22% | 63% | 65% | 25,929,769 | 1,349,429 | 5% | 8,366,467 | 32% | 10,780,951 | 42% | 2,129,439 | 8% | 246,653 | 1% | 3,056,830 | 12% | 2,747 | 159 | 33% | 1,192 | 43% | 338 | 12% | 2,144 | 78% | 519 | 5,479 | 402 | 4,383 | 586 | 5,479 | 253 | 75% | 630 | 5,479 | 540 | 3,023 | 662 | 5,479 | 177 | 10 | 52% |
| ont-Crg-PcrOnt_HpreCap_0+_BLaER105Rep1 | CRG_CRG0018_BLaER1_H02C | 2021-07-13 | 2021-07-18 | Crg | ONT | Human | BLaER1 | PcrOnt | Maxima | HpreCap | 0+ | Cytoplasm | False | 5 | 1 | False | GENCODE | 10 | NA | 18,412,904 | 707 | 782 | 13,852 | 85% | 7,996,028 | 51% | 66% | 49,260 | 0.62% | 713 | 10,033 | 25% | 63% | 47% | 21,277,004 | 997,074 | 5% | 6,406,502 | 30% | 10,710,486 | 50% | 1,305,929 | 6% | 226,340 | 1% | 1,630,673 | 8% | 4,060 | 259 | 33% | 995 | 25% | 254 | 6% | 2,806 | 69% | 390 | 3,912 | 322 | 3,912 | 503 | 3,652 | 176 | 69% | 509 | 3,160 | 414 | 2,552 | 561 | 3,160 | 124 | 8 | 49% |
| ont-Crg-PcrOnt_HpreCap_0+_BLaER106Rep1 | CRG_CRG0017_BLaER1_H02N | 2021-06-28 | 2021-07-05 | Crg | ONT | Human | BLaER1 | PcrOnt | Maxima | HpreCap | 0+ | Nucleus | False | 6 | 1 | False | GENCODE | 10 | NA | 13,510,752 | 423 | 538 | 10,797 | 69% | 3,477,647 | 37% | 35% | 49,956 | 1.44% | 491 | 13,323 | 26% | 63% | 14% | 22,189,227 | 1,571,838 | 7% | 4,460,949 | 20% | 9,494,896 | 43% | 1,852,854 | 8% | 191,538 | 1% | 4,617,152 | 21% | 12,629 | 1,345 | 28% | 1,825 | 14% | 185 | 1% | 9,438 | 75% | 296 | 3,545 | 280 | 3,545 | 408 | 3,457 | 113 | 61% | 342 | 2,030 | 298 | 1,882 | 476 | 2,030 | 39 | 4 | 21% |
| ont-Crg-CapTrap_HpreCap_0+_Brain01Rep1 | AM7962_HSaBRAIN_1887911o1966435 | 2018-09-03 | 2020-12-05 | Crg | ONT | Human | Brain | CapTrap | PrimeScript II | HpreCap | 0+ | Total | False | 1 | 1 | True | GENCODE-BENCHMARK | 10 | NA | 1,912,328 | 696 | 816 | 7,080 | 100% | 807,584 | 42% | 96% | 8,138 | 1.01% | 742 | 3,698 | NA | 0% | 66% | 4,722,152 | 108,381 | 2% | 2,047,692 | 43% | 1,995,994 | 42% | 381,371 | 8% | 49,763 | 1% | 138,951 | 3% | 170 | 89 | 44% | 107 | 63% | 61 | 36% | 122 | 72% | 471 | 1,652 | 443 | 1,244 | 488 | 1,652 | 43 | 70% | 560 | 1,652 | 566 | 1,119 | 560 | 1,652 | 43 | 23 | 70% |
| ont-Crg-CapTrap_HpreCap_0+_Brain01Rep2 | AM7962_HSaBRAIN_1966435 | 2019-10-15 | 2020-12-09 | Crg | ONT | Human | Brain | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 1 | 2 | False | GENCODE | 10 | NA | 8,487,880 | 1,030 | 1,135 | 10,601 | 98% | 4,495,853 | 54% | 95% | 40,198 | 0.89% | 777 | 8,796 | 18% | 68% | 61% | 15,842,344 | 1,127,621 | 7% | 5,402,652 | 34% | 5,477,620 | 35% | 1,893,712 | 12% | 205,196 | 1% | 1,735,543 | 11% | 1,994 | 240 | 38% | 1,350 | 68% | 386 | 19% | 1,526 | 77% | 595 | 2,414 | 566 | 1,829 | 603 | 2,414 | 296 | 77% | 632 | 2,154 | 647 | 1,829 | 624 | 2,154 | 250 | 30 | 65% |
| ont-Crg-CapTrap_HpreCap_0+_Brain01Rep3 | AM7962_HSaBRAIN_1966435 | 2020-01-22 | 2020-12-09 | Crg | ONT | Human | Brain | CapTrap | PrimeScript II | HpreCap | 0+ | Total | False | 1 | 3 | False | GENCODE | 10 | NA | 11,772,646 | 685 | 826 | 8,468 | 97% | 6,646,104 | 58% | 92% | 49,275 | 0.74% | 682 | 6,446 | 44% | 48% | 52% | 18,091,174 | 1,400,976 | 8% | 5,634,727 | 31% | 6,766,299 | 37% | 2,033,764 | 11% | 241,640 | 1% | 2,013,768 | 11% | 3,223 | 284 | 40% | 1,804 | 56% | 463 | 14% | 2,391 | 74% | 482 | 2,443 | 387 | 1,907 | 522 | 2,443 | 354 | 76% | 555 | 4,406 | 572 | 4,406 | 552 | 2,031 | 305 | 27 | 66% |
| ont-Crg-CapTrap_HpreCap_0+_Brain01Rep4 | AM7962_HSaBRAIN_1966435 | 2019-07-23 | 2020-12-05 | Crg | ONT | Human | Brain | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 1 | 4 | False | GENCODE | 10 | NA | 3,035,340 | 695 | 834 | 10,038 | 97% | 1,686,311 | 57% | 94% | 17,133 | 1.02% | 681 | 4,299 | 16% | 68% | 64% | 6,605,085 | 290,017 | 4% | 2,540,755 | 38% | 2,541,666 | 38% | 754,838 | 11% | 82,143 | 1% | 395,666 | 6% | 645 | 219 | 39% | 428 | 66% | 166 | 26% | 462 | 72% | 488 | 1,824 | 466 | 1,824 | 493 | 1,581 | 126 | 76% | 522 | 1,241 | 538 | 1,112 | 521 | 1,241 | 105 | 36 | 63% |
| ont-Crg-CapTrap_HpreCap_0+_Brain01Rep5 | AM7962_HSaBRAIN_1966435 | 2020-01-22 | 2020-12-09 | Crg | ONT | Human | Brain | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 1 | 5 | False | GENCODE | 10 | NA | 13,597,066 | 645 | 731 | 9,259 | 94% | 7,396,378 | 58% | 90% | 54,937 | 0.74% | 617 | 6,619 | 11% | 72% | 47% | 19,125,401 | 1,546,457 | 8% | 5,613,963 | 29% | 7,416,494 | 39% | 2,145,551 | 11% | 213,303 | 1% | 2,189,633 | 11% | 4,302 | 336 | 40% | 2,129 | 49% | 509 | 12% | 3,084 | 72% | 414 | 3,284 | 304 | 2,116 | 485 | 3,284 | 374 | 73% | 508 | 1,938 | 508 | 1,808 | 509 | 1,938 | 321 | 25 | 63% |
| ont-Crg-CapTrap_HpreCap_0+_Brain02Rep1 | ZYAGENoHR201_HSaBRAIN_HR201 | 2019-10-15 | 2020-12-09 | Crg | ONT | Human | Brain | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 2 | 1 | False | GENCODE | 10 | NA | 11,962,619 | 846 | 1,019 | 10,654 | 98% | 6,535,371 | 55% | 95% | 82,809 | 1.27% | 724 | 4,706 | 14% | 69% | 47% | 31,954,817 | 5,362,530 | 17% | 8,324,618 | 26% | 7,033,418 | 22% | 4,070,959 | 13% | 549,214 | 2% | 6,614,078 | 21% | 10,211 | 867 | 44% | 7,596 | 74% | 1,055 | 10% | 8,452 | 83% | 572 | 3,733 | 552 | 2,654 | 578 | 3,733 | 907 | 86% | 648 | 2,742 | 686 | 2,654 | 639 | 2,742 | 666 | 57 | 63% |
| ont-Crg-CapTrap_HpreCap_0+_Brain03Rep1 | Ambion_AM7962_HSaBRAIN_1997739 | 2020-05-25 | 2020-12-12 | Crg | ONT | Human | Brain | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 3 | 1 | False | GENCODE | 10 | NA | 12,427,745 | 957 | 1,143 | 14,664 | 99% | 6,583,548 | 53% | 96% | 44,768 | 0.68% | 825 | 6,246 | 10% | 69% | 63% | 16,756,093 | 1,160,715 | 7% | 5,801,218 | 35% | 5,879,907 | 35% | 1,943,770 | 12% | 225,879 | 1% | 1,744,604 | 10% | 1,884 | 153 | 39% | 1,314 | 70% | 365 | 19% | 1,428 | 76% | 612 | 2,558 | 562 | 2,558 | 621 | 2,050 | 274 | 75% | 656 | 1,918 | 660 | 1,918 | 653 | 1,689 | 230 | 19 | 63% |
| ont-Crg-CapTrap_Hv3_0+_Brain01Rep1 | AM7962_HSaBRAIN_1887911o1966435 | 2019-02-07 | 2020-12-05 | Crg | ONT | Human | Brain | CapTrap | PrimeScript II | Hv3 | 0+ | Total | False | 1 | 1 | False | GENCODE | 10 | NA | 6,229,666 | 703 | 826 | 8,232 | 99% | 3,244,929 | 53% | 92% | 42,804 | 1.32% | 711 | 5,340 | NA | 0% | 45% | 13,439,100 | 3,576,010 | 27% | 2,416,385 | 18% | 2,432,635 | 18% | 2,505,044 | 19% | 500,176 | 4% | 2,008,850 | 15% | 3,865 | 628 | 57% | 2,792 | 72% | 548 | 14% | 2,490 | 64% | 616 | 3,169 | 572 | 2,855 | 625 | 3,169 | 386 | 70% | 646 | 3,169 | 644 | 1,930 | 646 | 3,169 | 401 | 65 | 73% |
| ont-Crg-CapTrap_Hv3_0+_Brain03Rep1 | Ambion_AM7962_HSaBRAIN_1997739 | 2020-09-21 | 2020-12-13 | Crg | ONT | Human | Brain | CapTrap | PrimeScript II | Hv3 | 0+ | Total | True | 3 | 1 | False | GENCODE | 10 | NA | 7,384,393 | 1,078 | 1,237 | 11,012 | 99% | 3,971,479 | 54% | 92% | 56,358 | 1.42% | 802 | 4,470 | 33% | 54% | 45% | 18,033,369 | 5,393,953 | 30% | 3,030,216 | 17% | 3,088,464 | 17% | 3,032,041 | 17% | 668,806 | 4% | 2,819,889 | 16% | 4,918 | 671 | 57% | 3,527 | 72% | 632 | 13% | 3,360 | 68% | 713 | 2,786 | 664 | 2,611 | 725 | 2,786 | 462 | 73% | 713 | 2,744 | 694 | 2,396 | 716 | 2,744 | 462 | 63 | 73% |
| ont-Crg-CapTrap_MpreCap_0+_Brain01Rep1 | CRG_CRG0001_MMaBRAIN_20180919 | 2019-07-08 | 2020-12-07 | Crg | ONT | Mouse | Brain | CapTrap | PrimeScript II | MpreCap | 0+ | Total | False | 1 | 1 | False | GENCODE | 10 | NA | 12,082,189 | 879 | 1,077 | 15,415 | 98% | 5,708,188 | 48% | 87% | 48,029 | 0.84% | 922 | 5,463 | 52% | 41% | 54% | 23,022,663 | 2,139,374 | 9% | 7,217,183 | 31% | 9,489,891 | 41% | 1,566,854 | 7% | 213,330 | 1% | 2,396,031 | 10% | 3,373 | 285 | 54% | 1,408 | 42% | 424 | 13% | 2,395 | 71% | 580 | 3,342 | 508 | 3,342 | 635 | 3,052 | 296 | 70% | 655 | 2,729 | 687 | 2,729 | 627 | 2,655 | 223 | 19 | 53% |
| ont-Crg-CapTrap_MpreCap_0+_Brain01Rep2 | CRG_CRG0001_MMaBRAIN_20180919 | 2019-07-08 | 2020-12-07 | Crg | ONT | Mouse | Brain | CapTrap | PrimeScript II | MpreCap | 0+ | Total | False | 1 | 2 | False | GENCODE | 10 | NA | 10,365,601 | 858 | 1,056 | 27,375 | 95% | 4,614,993 | 47% | 85% | 42,963 | 0.93% | 890 | 5,239 | 48% | 37% | 52% | 21,331,486 | 1,909,491 | 9% | 6,636,574 | 31% | 9,188,575 | 43% | 1,376,742 | 6% | 189,412 | 1% | 2,030,692 | 10% | 3,208 | 326 | 56% | 1,166 | 36% | 367 | 11% | 2,282 | 71% | 548 | 3,478 | 459 | 3,478 | 628 | 2,711 | 263 | 72% | 608 | 2,677 | 615 | 2,427 | 604 | 2,677 | 192 | 20 | 52% |
| ont-Crg-CapTrap_MpreCap_0+_Brain01Rep3 | CRG_CRG0001_MMaBRAIN_20180919 | 2019-12-03 | 2020-12-11 | Crg | ONT | Mouse | Brain | CapTrap | PrimeScript II | MpreCap | 0+ | Total | True | 1 | 3 | False | GENCODE | 10 | NA | 21,840,675 | 781 | 953 | 10,758 | 97% | 10,104,849 | 48% | 84% | 69,529 | 0.69% | 903 | 11,672 | 12% | 72% | 51% | 31,068,598 | 3,662,587 | 12% | 8,993,829 | 29% | 11,946,643 | 38% | 2,214,903 | 7% | 269,491 | 1% | 3,981,145 | 13% | 6,535 | 310 | 53% | 2,438 | 37% | 640 | 10% | 4,666 | 71% | 515 | 3,610 | 390 | 3,610 | 618 | 3,459 | 449 | 70% | 631 | 3,610 | 632 | 3,610 | 631 | 2,895 | 330 | 16 | 52% |
| ont-Crg-CapTrap_MpreCap_0+_Brain01Rep4 | CRG_CRG0001_MMaBRAIN_20180919 | 2019-12-03 | 2020-12-09 | Crg | ONT | Mouse | Brain | CapTrap | PrimeScript II | MpreCap | 0+ | Total | True | 1 | 4 | False | GENCODE | 10 | NA | 11,832,507 | 766 | 947 | 16,181 | 97% | 5,256,808 | 46% | 85% | 46,251 | 0.88% | 846 | 5,114 | 16% | 71% | 50% | 21,872,622 | 2,104,368 | 10% | 6,913,026 | 32% | 9,071,681 | 41% | 1,439,542 | 7% | 197,878 | 1% | 2,146,127 | 10% | 3,806 | 330 | 55% | 1,484 | 39% | 453 | 12% | 2,644 | 69% | 514 | 3,504 | 386 | 3,504 | 613 | 3,457 | 310 | 68% | 616 | 3,457 | 628 | 2,443 | 614 | 3,457 | 244 | 21 | 54% |
| ont-Crg-CapTrap_MpreCap_0+_Brain01Rep5 | CRG_CRG0001_MMaBRAIN_20180919 | 2020-04-30 | 2020-12-10 | Crg | ONT | Mouse | Brain | CapTrap | PrimeScript II | MpreCap | 0+ | Total | True | 1 | 5 | False | GENCODE | 10 | NA | 7,686,773 | 1,536 | 1,664 | 15,585 | 99% | 3,798,166 | 50% | 92% | 38,527 | 1.01% | 1,107 | 5,557 | 19% | 66% | 62% | 21,195,373 | 1,569,530 | 7% | 7,568,565 | 36% | 8,331,518 | 39% | 1,462,618 | 7% | 208,442 | 1% | 2,054,700 | 10% | 1,735 | 228 | 54% | 897 | 52% | 324 | 19% | 1,298 | 75% | 750 | 3,565 | 694 | 3,474 | 808 | 3,565 | 241 | 74% | 750 | 3,216 | 741 | 2,571 | 766 | 3,216 | 164 | 22 | 51% |
| ont-Crg-CapTrap_MpreCap_0+_Brain01Rep6 | CRG_CRG0001_MMaBRAIN_20180919 | 2019-07-08 | 2020-12-06 | Crg | ONT | Mouse | Brain | CapTrap | PrimeScript II | MpreCap | 0+ | Total | True | 1 | 6 | False | GENCODE | 10 | NA | 4,749,477 | 745 | 918 | 9,584 | 96% | 2,141,515 | 47% | 77% | 27,623 | 1.29% | 830 | 4,654 | 29% | 62% | 45% | 15,066,016 | 978,075 | 6% | 5,106,433 | 34% | 7,072,513 | 47% | 804,694 | 5% | 114,877 | 1% | 989,424 | 7% | 1,819 | 400 | 56% | 519 | 29% | 224 | 12% | 1,255 | 69% | 502 | 3,556 | 442 | 3,474 | 578 | 3,556 | 152 | 68% | 596 | 2,206 | 682 | 2,206 | 580 | 1,819 | 100 | 22 | 45% |
| ont-Crg-CapTrap_MpreCap_0+_Brain01Rep7 | CRG_CRG0001_MMaBRAIN_20180919 | 2019-07-10 | 2020-12-08 | Crg | ONT | Mouse | Brain | CapTrap | PrimeScript II | MpreCap | 0+ | Total | True | 1 | 7 | False | GENCODE | 10 | NA | 12,956,593 | 740 | 906 | 12,157 | 95% | 5,446,876 | 44% | 78% | 48,153 | 0.88% | 837 | 5,211 | 19% | 69% | 47% | 23,303,918 | 2,210,169 | 9% | 7,069,031 | 30% | 9,997,561 | 43% | 1,479,915 | 6% | 178,783 | 1% | 2,368,459 | 10% | 4,283 | 346 | 54% | 1,380 | 32% | 424 | 10% | 2,986 | 70% | 493 | 3,459 | 412 | 3,459 | 576 | 3,359 | 298 | 70% | 597 | 3,094 | 618 | 2,432 | 586 | 3,094 | 232 | 19 | 55% |
| ont-Crg-CapTrap_Mv2_0+_Brain01Rep1 | CRG_CRG0001_MMaBRAIN_20180919 | 2020-01-28 | 2020-12-09 | Crg | ONT | Mouse | Brain | CapTrap | PrimeScript II | Mv2 | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 8,934,495 | 779 | 984 | 13,408 | 98% | 3,920,964 | 45% | 80% | 51,293 | 1.31% | 764 | 4,920 | 52% | 53% | 36% | 19,273,115 | 7,328,876 | 38% | 3,117,151 | 16% | 4,219,339 | 22% | 2,063,072 | 11% | 330,172 | 2% | 2,214,505 | 11% | 7,652 | 877 | 69% | 4,266 | 56% | 789 | 10% | 4,961 | 65% | 685 | 4,139 | 560 | 4,139 | 726 | 3,814 | 542 | 69% | 712 | 3,301 | 686 | 3,301 | 722 | 2,795 | 499 | 57 | 63% |
| ont-Crg-CapTrap_Mv2_0+_Brain01Rep2 | CRG_CRG0001_MMaBRAIN_20180919 | 2020-01-28 | 2020-12-09 | Crg | ONT | Mouse | Brain | CapTrap | PrimeScript II | Mv2 | 0+ | Total | True | 1 | 2 | False | GENCODE | 10 | NA | 8,079,394 | 715 | 919 | 12,712 | 97% | 3,516,676 | 45% | 82% | 47,539 | 1.35% | 750 | 4,911 | 57% | 48% | 36% | 17,814,015 | 6,732,542 | 38% | 2,952,325 | 17% | 3,888,732 | 22% | 1,920,299 | 11% | 298,355 | 2% | 2,021,762 | 11% | 7,165 | 910 | 69% | 4,116 | 57% | 722 | 10% | 4,624 | 65% | 676 | 3,514 | 541 | 3,514 | 718 | 3,286 | 505 | 70% | 722 | 3,304 | 694 | 3,304 | 724 | 2,624 | 478 | 61 | 66% |
| ont-Crg-CapTrap_Mv2_0+_Brain01Rep3 | CRG_CRG0001_MMaBRAIN_20180919 | 2020-06-17 | 2020-12-12 | Crg | ONT | Mouse | Brain | CapTrap | PrimeScript II | Mv2 | 0+ | Total | True | 1 | 3 | False | GENCODE | 10 | NA | 6,442,939 | 1,081 | 1,208 | 11,027 | 98% | 2,912,516 | 46% | 86% | 40,733 | 1.40% | 824 | 4,902 | 43% | 52% | 42% | 16,258,405 | 5,608,854 | 34% | 3,117,951 | 19% | 3,611,405 | 22% | 1,845,115 | 11% | 288,925 | 2% | 1,786,155 | 11% | 5,409 | 853 | 70% | 3,413 | 63% | 681 | 13% | 3,634 | 67% | 751 | 4,032 | 686 | 4,032 | 771 | 3,041 | 468 | 69% | 779 | 2,810 | 775 | 2,810 | 780 | 2,733 | 447 | 70 | 66% |
| ont-Crg-Smarter_HpreCap_0+_Brain01Rep1 | CRG_HSaBRAIN_1887911o1966435 | 2018-05-31 | 2020-12-09 | Crg | ONT | Human | Brain | SMARTer | SMARTScribe | HpreCap | 0+ | Total | False | 1 | 1 | True | GENCODE-BENCHMARK | 10 | NA | 5,538,782 | 536 | 654 | 11,946 | 92% | 3,038,602 | 60% | 22% | 32,252 | 1.06% | 598 | 6,374 | 36% | 62% | 20% | 19,389,298 | 1,528,496 | 8% | 3,363,731 | 17% | 10,251,781 | 53% | 1,085,801 | 6% | 93,372 | 0% | 3,066,117 | 16% | 7,860 | 1,547 | 29% | 158 | 2% | 346 | 4% | 6,687 | 85% | 445 | 3,666 | 441 | 3,666 | 546 | 2,653 | 319 | 92% | 847 | 3,053 | 896 | 3,053 | 570 | 1,606 | 30 | 6 | 9% |
| ont-Crg-Smarter_Hv3_0+_Brain01Rep1 | AM7962_HSaBRAIN_1887911o1966435 | 2019-02-07 | 2020-12-05 | Crg | ONT | Human | Brain | SMARTer | SMARTScribe | Hv3 | 0+ | Total | False | 1 | 1 | False | GENCODE | 10 | NA | 2,637,901 | 643 | 735 | 8,474 | 89% | 1,337,924 | 57% | 43% | 23,516 | 1.76% | 594 | 6,370 | 20% | 57% | 28% | 11,939,889 | 1,277,998 | 11% | 2,368,174 | 20% | 5,833,768 | 49% | 1,176,457 | 10% | 247,520 | 2% | 1,035,972 | 9% | 3,054 | 1,302 | 44% | 439 | 14% | 168 | 6% | 2,063 | 68% | 481 | 2,864 | 447 | 2,864 | 613 | 2,357 | 112 | 67% | 672 | 2,307 | 696 | 2,307 | 666 | 2,221 | 65 | 28 | 39% |
| ont-Crg-Telop_HpreCap_0+_Brain01Rep1 | AM7962_HSaBRAIN_1966435 | 2019-10-01 | 2020-12-06 | Crg | ONT | Human | Brain | Teloprime | E1 RT Lexogen | HpreCap | 0+ | Total | False | 1 | 1 | True | GENCODE-BENCHMARK | 10 | NA | 3,706,978 | 755 | 928 | 13,286 | 99% | 2,154,768 | 59% | 53% | 28,053 | 1.30% | 790 | 5,638 | 33% | 24% | 37% | 17,926,789 | 1,456,876 | 8% | 4,116,550 | 23% | 8,717,645 | 49% | 1,534,174 | 9% | 106,694 | 1% | 1,994,850 | 11% | 4,310 | 1,177 | 42% | 253 | 6% | 202 | 5% | 3,442 | 80% | 495 | 3,032 | 481 | 2,772 | 652 | 3,032 | 143 | 71% | 655 | 2,087 | 644 | 2,087 | 669 | 1,818 | 62 | 17 | 31% |
| ont-Crg-Telop_HpreCap_0+_Brain01Rep2 | CRG_CRG0001_MMaBRAIN_20180919 | 2019-08-21 | 2020-12-06 | Crg | ONT | Human | Brain | Teloprime | E1 RT Lexogen | HpreCap | 0+ | Total | True | 1 | 2 | False | GENCODE-BENCHMARK | 10 | NA | 6,962,176 | 787 | 1,039 | 19,724 | 99% | 3,949,344 | 57% | 49% | 56,355 | 1.43% | 857 | 10,853 | 20% | 62% | 40% | 32,103,134 | 4,019,868 | 13% | 6,135,779 | 19% | 13,037,564 | 41% | 3,067,343 | 10% | 241,459 | 1% | 5,601,121 | 17% | 10,377 | 1,502 | 41% | 1,812 | 17% | 467 | 5% | 8,322 | 80% | 534 | 2,913 | 471 | 2,913 | 689 | 2,453 | 374 | 80% | 716 | 2,755 | 716 | 2,755 | 716 | 2,170 | 274 | 40 | 59% |
| ont-Crg-Telop_MpreCap_0+_Brain01Rep1 | CRG_CRG0001_MMaBRAIN_20180919 | 2019-10-01 | 2020-12-09 | Crg | ONT | Mouse | Brain | Teloprime | E1 RT Lexogen | MpreCap | 0+ | Total | False | 1 | 1 | True | GENCODE-BENCHMARK | 10 | NA | 7,201,050 | 1,231 | 1,448 | 17,423 | 98% | 3,133,979 | 44% | 79% | 35,394 | 1.13% | 1,351 | 11,612 | 45% | 35% | 47% | 30,670,568 | 3,514,454 | 11% | 8,917,511 | 29% | 11,960,194 | 39% | 1,820,706 | 6% | 162,313 | 1% | 4,295,390 | 14% | 4,404 | 621 | 53% | 294 | 7% | 430 | 10% | 3,668 | 83% | 857 | 4,614 | 832 | 4,614 | 1,119 | 4,381 | 318 | 74% | 986 | 4,575 | 1,006 | 4,575 | 902 | 4,381 | 107 | 15 | 25% |
| ont-Crg-Telop_MpreCap_0+_Brain01Rep2 | AM7962_HSaBRAIN_1966435 | 2019-08-21 | 2020-12-08 | Crg | ONT | Mouse | Brain | Teloprime | E1 RT Lexogen | MpreCap | 0+ | Total | True | 1 | 2 | False | GENCODE-BENCHMARK | 10 | NA | 8,271,595 | 1,391 | 1,550 | 18,074 | 99% | 4,226,605 | 52% | 80% | 69,819 | 1.65% | 1,467 | 16,293 | 31% | 57% | 55% | 45,723,432 | 7,425,058 | 16% | 11,615,039 | 25% | 14,786,010 | 32% | 3,073,518 | 7% | 238,648 | 1% | 8,585,159 | 19% | 8,272 | 1,008 | 49% | 2,753 | 33% | 664 | 8% | 6,997 | 85% | 973 | 4,580 | 928 | 4,580 | 1,043 | 3,723 | 527 | 79% | 1,027 | 5,317 | 1,088 | 5,317 | 991 | 3,047 | 308 | 38 | 46% |
| ont-Cshl-CapTrap_HpreCap_0+_Brain01Rep1 | AM7962_HSaBRAIN_1887911o1966435 | 2018-09-03 | 2020-12-16 | Cshl | ONT | Human | Brain | CapTrap | PrimeScript II | HpreCap | 0+ | Total | False | 1 | 1 | True | GENCODE-BENCHMARK | 10 | NA | 7,587,555 | 721 | 860 | 15,576 | 99% | 4,203,328 | 56% | 96% | 20,778 | 0.49% | 809 | 4,459 | NA | 0% | 60% | 11,137,624 | 422,901 | 4% | 4,368,284 | 39% | 4,498,008 | 40% | 1,058,845 | 10% | 104,250 | 1% | 685,336 | 6% | 749 | 100 | 46% | 319 | 43% | 196 | 26% | 545 | 73% | 522 | 2,540 | 492 | 2,540 | 556 | 1,880 | 141 | 72% | 633 | 1,923 | 640 | 1,923 | 622 | 1,880 | 90 | 12 | 46% |
| ont-Cshl-Smarter_HpreCap_0+_Brain01Rep1 | AM7962_HSaBRAIN_1887911o1966435 | 2018-09-03 | 2020-12-16 | Cshl | ONT | Human | Brain | SMARTer | SMARTScribe | HpreCap | 0+ | Total | False | 1 | 1 | True | GENCODE-BENCHMARK | 10 | NA | 6,576,840 | 622 | 761 | 10,031 | 91% | 3,578,762 | 60% | 26% | 36,092 | 1.01% | 738 | 6,369 | 35% | 62% | 23% | 25,189,028 | 2,148,279 | 9% | 4,529,569 | 18% | 12,077,192 | 48% | 1,396,993 | 6% | 106,275 | 0% | 4,930,720 | 20% | 9,483 | 1,582 | 27% | 206 | 2% | 515 | 5% | 8,271 | 87% | 584 | 4,447 | 582 | 4,447 | 660 | 3,019 | 489 | 95% | 986 | 3,711 | 1,022 | 3,711 | 662 | 3,019 | 43 | 7 | 8% |
| pacBio-Cshl-CapTrap_HpreCap_0+_Brain01Rep1 | AM7962_HSaBRAIN_1887911o1966435 | 2018-09-03 | 2019-02-14 | Cshl | pacBioSI | Human | Brain | CapTrap | PrimeScript II | HpreCap | 0+ | Total | False | 1 | 1 | True | GENCODE-BENCHMARK | 10 | NA | 570,433 | 946 | 1,103 | 12,260 | 100% | 512,170 | 90% | 97% | 7,697 | 1.50% | 1,095 | 4,003 | NA | 0% | 80% | 6,311,354 | 83,851 | 1% | 3,177,406 | 50% | 2,564,162 | 41% | 331,452 | 5% | 26,201 | 0% | 128,282 | 2% | 81 | 142 | 51% | 44 | 54% | 33 | 41% | 57 | 70% | 668 | 2,540 | 749 | 2,540 | 628 | 1,659 | 22 | 67% | 694 | 1,659 | 790 | 1,509 | 646 | 1,659 | 17 | 30 | 52% |
| pacBio-Cshl-Smarter_HpreCap_0+_Brain01Rep1 | AM7962_HSaBRAIN_1887911o1966435 | 2018-09-03 | 2019-02-15 | Cshl | pacBioSI | Human | Brain | SMARTer | SMARTScribe | HpreCap | 0+ | Total | False | 1 | 1 | True | GENCODE-BENCHMARK | 10 | NA | 502,020 | 1,146 | 1,286 | 11,066 | 100% | 424,764 | 85% | 46% | 9,926 | 2.34% | 1,140 | 5,028 | 79% | 71% | 45% | 10,347,279 | 481,389 | 5% | 2,863,051 | 28% | 5,537,785 | 54% | 420,895 | 4% | 24,585 | 0% | 1,019,574 | 10% | 1,178 | 2,354 | 30% | 36 | 3% | 146 | 12% | 1,122 | 95% | 1,037 | 4,121 | 1,039 | 4,121 | 916 | 2,059 | 139 | 95% | 1,281 | 3,048 | 1,287 | 3,048 | 976 | 1,315 | 6 | 12 | 4% |
| pacBioSII-Cshl-CapTrap_HpreCap_0+_Brain03Rep1 | Ambion_AM7962_HSaBRAIN_1997739 | 2020-09-01 | 2021-06-09 | Cshl | pacBioSII | Human | Brain | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 3 | 1 | False | GENCODE | 30 | NA | 1,722,690 | 825 | 956 | 6,379 | 98% | 1,559,477 | 93% | 95% | 18,609 | 1.19% | 964 | 5,311 | 78% | 87% | 69% | 11,379,871 | 325,150 | 3% | 5,105,502 | 45% | 4,421,315 | 39% | 928,191 | 8% | 81,614 | 1% | 518,099 | 5% | 503 | 299 | 45% | 240 | 48% | 148 | 29% | 360 | 72% | 529 | 2,777 | 418 | 2,157 | 597 | 2,777 | 108 | 73% | 608 | 1,811 | 630 | 1,514 | 598 | 1,811 | 86 | 51 | 58% |
| pacBioSII-Cshl-CapTrap_Hv3_0+_Brain03Rep1 | Ambion_AM7962_HSaBRAIN_1997739 | 2020-09-01 | 2021-06-10 | Cshl | pacBioSII | Human | Brain | CapTrap | PrimeScript II | Hv3 | 0+ | Total | True | 3 | 1 | False | GENCODE | 30 | NA | 2,584,701 | 962 | 1,079 | 5,709 | 100% | 2,357,816 | 91% | 93% | 39,338 | 1.67% | 1,029 | 4,488 | 91% | 62% | 46% | 18,105,110 | 4,872,453 | 27% | 3,657,332 | 20% | 3,425,038 | 19% | 2,946,999 | 16% | 589,286 | 3% | 2,614,002 | 14% | 3,488 | 1,352 | 60% | 2,215 | 64% | 511 | 15% | 2,391 | 69% | 832 | 3,924 | 790 | 3,131 | 847 | 3,924 | 368 | 72% | 814 | 3,022 | 758 | 2,400 | 818 | 3,022 | 343 | 133 | 67% |
| pacBioSII-Cshl-CapTrap_MpreCap_0+_Brain01Rep1 | CRG_CRG0001_MMaBRAIN_20180919 | 2020-09-01 | 2021-06-10 | Cshl | pacBioSII | Mouse | Brain | CapTrap | PrimeScript II | MpreCap | 0+ | Total | True | 1 | 1 | False | GENCODE | 30 | NA | 3,949,892 | 1,163 | 1,275 | 8,095 | 98% | 3,443,091 | 89% | 91% | 38,443 | 1.12% | 1,402 | 6,089 | 79% | 82% | 59% | 28,857,923 | 2,023,606 | 7% | 10,729,212 | 37% | 11,031,753 | 38% | 1,864,184 | 6% | 90,486 | 0% | 3,118,682 | 11% | 2,125 | 551 | 60% | 580 | 27% | 309 | 15% | 1,565 | 74% | 606 | 5,255 | 402 | 5,255 | 948 | 4,200 | 224 | 72% | 800 | 3,684 | 778 | 3,610 | 803 | 3,684 | 136 | 35 | 44% |
| pacBioSII-Cshl-CapTrap_Mv2_0+_Brain01Rep1 | CRG_CRG0001_MMaBRAIN_20180919 | 2020-09-01 | 2021-05-14 | Cshl | pacBioSII | Mouse | Brain | CapTrap | PrimeScript II | Mv2 | 0+ | Total | True | 1 | 1 | False | GENCODE | 30 | NA | 1,041,995 | 858 | 973 | 5,481 | 99% | 871,100 | 84% | 85% | 16,782 | 1.93% | 947 | 3,982 | 90% | 52% | 47% | 10,240,862 | 2,747,393 | 27% | 2,659,596 | 26% | 2,637,722 | 26% | 1,212,344 | 12% | 121,091 | 1% | 862,716 | 8% | 2,414 | 2,337 | 74% | 1,297 | 54% | 400 | 17% | 1,534 | 64% | 829 | 3,711 | 757 | 3,565 | 872 | 3,711 | 247 | 62% | 828 | 3,184 | 875 | 3,184 | 808 | 2,778 | 237 | 229 | 59% |
| ont-Crg-CapTrap_Hv3_0+_CpoolA01Rep1 | CRG_CRG0011_HSCell_pool_202100316 | 2021-06-08 | 2021-06-17 | Crg | ONT | Human | CpoolA | CapTrap | PrimeScript II | Hv3 | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 6,450,690 | 826 | 998 | 9,763 | 98% | 2,737,618 | 43% | 88% | 35,885 | 1.31% | 734 | 4,978 | 70% | 38% | 52% | 12,098,126 | 3,031,333 | 25% | 2,338,249 | 19% | 2,580,727 | 21% | 1,943,394 | 16% | 462,942 | 4% | 1,741,481 | 14% | 3,484 | 551 | 63% | 2,153 | 62% | 682 | 20% | 2,205 | 63% | 630 | 3,031 | 556 | 2,820 | 655 | 3,031 | 449 | 66% | 656 | 3,031 | 632 | 2,673 | 660 | 3,031 | 443 | 70 | 65% |
| ont-Crg-CapTrap_HpreCap_0+_EmbBrain01Rep1 | Clontech_636526_HSeBRAIN_1401207A | 2020-06-11 | 2020-12-13 | Crg | ONT | Human | EmbryoBrain | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 12,727,542 | 972 | 1,121 | 9,462 | 98% | 6,817,000 | 54% | 95% | 42,985 | 0.63% | 857 | 4,922 | 18% | 69% | 63% | 17,733,856 | 795,273 | 4% | 5,953,633 | 34% | 6,882,726 | 39% | 1,898,606 | 11% | 241,043 | 1% | 1,962,575 | 11% | 1,471 | 117 | 36% | 801 | 54% | 242 | 16% | 1,085 | 74% | 588 | 2,946 | 486 | 2,857 | 635 | 2,946 | 184 | 76% | 627 | 2,857 | 663 | 2,857 | 602 | 2,104 | 138 | 11 | 57% |
| ont-Crg-CapTrap_Hv3_0+_EmbBrain01Rep1 | Clontech_636526_HSeBRAIN_1401207A | 2020-10-06 | 2020-12-15 | Crg | ONT | Human | EmbryoBrain | CapTrap | PrimeScript II | Hv3 | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 12,488,129 | 930 | 1,107 | 12,101 | 98% | 6,493,437 | 53% | 89% | 63,671 | 0.98% | 834 | 5,314 | 46% | 52% | 46% | 20,433,046 | 5,402,473 | 26% | 3,434,638 | 17% | 4,244,840 | 21% | 3,157,187 | 15% | 709,311 | 3% | 3,484,597 | 17% | 5,365 | 437 | 57% | 3,095 | 58% | 622 | 12% | 3,413 | 64% | 716 | 3,626 | 658 | 3,430 | 738 | 3,626 | 407 | 65% | 705 | 3,240 | 681 | 3,036 | 722 | 3,240 | 366 | 30 | 59% |
| ont-Crg-CapTrap_MpreCap_0+_EmbBrain01Rep1 | CRG_CRG0005_MMeBRAIN_20190130 | 2020-04-23 | 2020-12-10 | Crg | ONT | Mouse | EmbryoBrain | CapTrap | PrimeScript II | MpreCap | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 7,468,991 | 1,209 | 1,384 | 64,310 | 98% | 3,617,602 | 49% | 91% | 35,547 | 0.98% | 1,048 | 5,677 | 24% | 65% | 61% | 19,727,869 | 1,361,698 | 7% | 7,268,052 | 37% | 7,856,198 | 40% | 1,298,310 | 7% | 222,845 | 1% | 1,720,766 | 9% | 1,594 | 217 | 57% | 688 | 43% | 290 | 18% | 1,124 | 71% | 654 | 5,025 | 534 | 5,025 | 760 | 3,480 | 211 | 73% | 690 | 3,480 | 741 | 2,752 | 640 | 3,480 | 147 | 20 | 51% |
| ont-Crg-CapTrap_Mv2_0+_EmbBrain01Rep1 | CRG_CRG0005_MMeBRAIN_20190130 | 2020-05-12 | 2020-12-11 | Crg | ONT | Mouse | EmbryoBrain | CapTrap | PrimeScript II | Mv2 | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 9,385,770 | 994 | 1,154 | 11,488 | 98% | 3,845,585 | 42% | 83% | 45,231 | 1.18% | 833 | 4,595 | 56% | 41% | 41% | 18,440,798 | 7,169,851 | 39% | 3,055,072 | 17% | 3,695,357 | 20% | 1,984,988 | 11% | 345,388 | 2% | 2,190,142 | 12% | 7,159 | 776 | 71% | 3,811 | 53% | 781 | 11% | 4,514 | 63% | 762 | 4,574 | 712 | 4,574 | 785 | 3,396 | 522 | 67% | 771 | 3,307 | 810 | 3,307 | 752 | 3,239 | 450 | 49 | 58% |
| pacBioSII-Cshl-CapTrap_HpreCap_0+_EmbBrain01Rep1 | Clontech_636526_HSeBRAIN_1401207A | 2020-09-01 | 2021-06-09 | Cshl | pacBioSII | Human | EmbryoBrain | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 1 | 1 | False | GENCODE | 30 | NA | 3,078,621 | 809 | 977 | 9,398 | 97% | 2,770,543 | 92% | 93% | 28,299 | 1.02% | 1,071 | 5,045 | 84% | 87% | 62% | 17,417,020 | 491,257 | 3% | 6,782,239 | 39% | 7,044,660 | 40% | 1,524,513 | 9% | 105,297 | 1% | 1,469,054 | 8% | 850 | 283 | 42% | 226 | 27% | 153 | 18% | 590 | 69% | 470 | 3,165 | 320 | 3,033 | 767 | 3,165 | 107 | 70% | 642 | 2,262 | 662 | 2,262 | 599 | 1,937 | 59 | 20 | 39% |
| pacBioSII-Cshl-CapTrap_Hv3_0+_EmbBrain01Rep1 | Clontech_636526_HSeBRAIN_1401207A | 2020-09-01 | 2021-05-14 | Cshl | pacBioSII | Human | EmbryoBrain | CapTrap | PrimeScript II | Hv3 | 0+ | Total | True | 1 | 1 | False | GENCODE | 30 | NA | 690,806 | 992 | 1,139 | 5,367 | 99% | 619,150 | 91% | 90% | 12,133 | 1.96% | 1,141 | 4,635 | 92% | 32% | 57% | 7,525,463 | 1,113,019 | 15% | 2,150,368 | 29% | 2,066,461 | 27% | 1,158,478 | 15% | 270,011 | 4% | 767,126 | 10% | 795 | 1,163 | 62% | 349 | 44% | 152 | 19% | 474 | 60% | 950 | 3,659 | 876 | 3,197 | 1,042 | 3,659 | 90 | 59% | 895 | 3,659 | 882 | 3,197 | 928 | 3,659 | 57 | 83 | 38% |
| pacBioSII-Cshl-CapTrap_MpreCap_0+_EmbBrain01Rep1 | CRG_CRG0005_MMeBRAIN_20190130 | 2020-09-01 | 2021-06-10 | Cshl | pacBioSII | Mouse | EmbryoBrain | CapTrap | PrimeScript II | MpreCap | 0+ | Total | True | 1 | 1 | False | GENCODE | 30 | NA | 5,725,147 | 1,204 | 1,305 | 9,383 | 98% | 4,994,734 | 89% | 92% | 50,066 | 1.00% | 1,536 | 6,692 | 84% | 84% | 59% | 36,270,694 | 2,869,784 | 8% | 12,797,591 | 35% | 12,907,174 | 36% | 2,606,542 | 7% | 126,869 | 0% | 4,962,734 | 14% | 2,845 | 509 | 57% | 694 | 24% | 356 | 13% | 2,170 | 76% | 615 | 5,276 | 341 | 5,276 | 1,235 | 4,329 | 261 | 73% | 921 | 4,919 | 880 | 4,919 | 1,023 | 3,664 | 149 | 27 | 42% |
| pacBioSII-Cshl-CapTrap_Mv2_0+_EmbBrain01Rep1 | CRG_CRG0005_MMeBRAIN_20190130 | 2020-09-01 | 2021-05-14 | Cshl | pacBioSII | Mouse | EmbryoBrain | CapTrap | PrimeScript II | Mv2 | 0+ | Total | True | 1 | 1 | False | GENCODE | 30 | NA | 1,220,697 | 1,029 | 1,139 | 6,001 | 99% | 1,044,777 | 86% | 87% | 17,952 | 1.72% | 1,154 | 4,842 | 90% | 28% | 50% | 12,139,188 | 3,618,813 | 30% | 2,974,198 | 25% | 2,754,339 | 23% | 1,446,645 | 12% | 138,206 | 1% | 1,206,987 | 10% | 2,589 | 2,136 | 76% | 1,286 | 50% | 401 | 15% | 1,705 | 66% | 1,007 | 4,574 | 910 | 4,574 | 1,082 | 4,326 | 258 | 64% | 1,011 | 3,801 | 986 | 3,614 | 1,031 | 3,801 | 206 | 170 | 51% |
| ont-Crg-CapTrap_HpreCap_0+_EmbHeart01Rep1 | Clontech_636583_HSeHEART_1005013 | 2020-06-11 | 2020-12-14 | Crg | ONT | Human | EmbryoHeart | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 10,069,760 | 1,263 | 1,289 | 10,170 | 99% | 5,682,654 | 57% | 97% | 27,468 | 0.48% | 866 | 5,342 | 24% | 65% | 72% | 11,635,312 | 375,971 | 3% | 4,753,107 | 41% | 4,534,489 | 39% | 992,888 | 9% | 150,999 | 1% | 827,858 | 7% | 576 | 58 | 35% | 398 | 69% | 143 | 25% | 420 | 73% | 595 | 2,869 | 640 | 2,869 | 588 | 2,640 | 110 | 77% | 652 | 2,458 | 689 | 1,804 | 646 | 2,458 | 92 | 9 | 64% |
| ont-Crg-CapTrap_Hv3_0+_EmbHeart01Rep1 | Clontech_636583_HSeHEART_1005013 | 2020-10-06 | 2020-12-15 | Crg | ONT | Human | EmbryoHeart | CapTrap | PrimeScript II | Hv3 | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 13,400,612 | 984 | 1,148 | 13,524 | 99% | 7,392,388 | 56% | 92% | 56,065 | 0.76% | 835 | 6,231 | 63% | 50% | 53% | 17,024,145 | 3,887,996 | 23% | 3,434,990 | 20% | 3,640,155 | 21% | 2,765,240 | 16% | 612,348 | 4% | 2,683,416 | 16% | 3,685 | 278 | 57% | 2,455 | 67% | 630 | 17% | 2,405 | 65% | 697 | 3,464 | 646 | 2,839 | 709 | 3,464 | 432 | 69% | 704 | 3,458 | 698 | 2,839 | 705 | 3,458 | 426 | 32 | 68% |
| ont-Crg-CapTrap_MpreCap_0+_EmbHeart01Rep1 | CRG_CRG0006_MMeHEART_20190130 | 2020-04-23 | 2020-12-11 | Crg | ONT | Mouse | EmbryoHeart | CapTrap | PrimeScript II | MpreCap | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 12,671,259 | 1,322 | 1,422 | 14,201 | 99% | 6,126,897 | 49% | 96% | 38,012 | 0.62% | 1,038 | 6,201 | 21% | 68% | 69% | 18,084,166 | 1,164,827 | 6% | 7,227,081 | 40% | 6,593,556 | 36% | 1,099,346 | 6% | 262,558 | 1% | 1,736,798 | 10% | 1,305 | 104 | 47% | 784 | 60% | 324 | 25% | 932 | 71% | 704 | 4,985 | 695 | 4,985 | 710 | 3,551 | 231 | 71% | 694 | 3,551 | 744 | 2,439 | 680 | 3,551 | 188 | 15 | 58% |
| ont-Crg-CapTrap_Mv2_0+_EmbHeart01Rep1 | CRG_CRG0006_MMeHEART_20190130 | 2020-05-12 | 2020-12-12 | Crg | ONT | Mouse | EmbryoHeart | CapTrap | PrimeScript II | Mv2 | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 11,935,460 | 1,015 | 1,177 | 14,165 | 99% | 5,849,238 | 50% | 90% | 43,720 | 0.75% | 844 | 4,992 | 60% | 41% | 52% | 15,213,863 | 4,712,427 | 31% | 3,339,120 | 22% | 3,275,018 | 22% | 1,627,315 | 11% | 357,268 | 2% | 1,902,715 | 13% | 4,484 | 381 | 67% | 2,855 | 64% | 708 | 16% | 3,048 | 68% | 746 | 3,353 | 687 | 3,057 | 764 | 3,353 | 490 | 69% | 734 | 2,935 | 722 | 2,823 | 735 | 2,935 | 461 | 39 | 65% |
| pacBioSII-Cshl-CapTrap_HpreCap_0+_EmbHeart01Rep1 | Clontech_636583_HSeHEART_1005013 | 2020-09-01 | 2021-06-09 | Cshl | pacBioSII | Human | EmbryoHeart | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 1 | 1 | False | GENCODE | 30 | NA | 2,509,506 | 800 | 931 | 6,601 | 99% | 2,377,325 | 96% | 97% | 17,294 | 0.73% | 1,117 | 4,785 | 90% | 81% | 74% | 12,625,190 | 223,959 | 2% | 5,907,547 | 47% | 5,055,555 | 40% | 763,943 | 6% | 61,246 | 0% | 612,940 | 5% | 319 | 128 | 40% | 141 | 44% | 95 | 30% | 230 | 72% | 518 | 4,751 | 358 | 2,408 | 634 | 4,751 | 78 | 82% | 671 | 4,751 | 690 | 2,206 | 639 | 4,751 | 55 | 22 | 58% |
| pacBioSII-Cshl-CapTrap_Hv3_0+_EmbHeart01Rep1 | Clontech_636583_HSeHEART_1005013 | 2020-09-01 | 2021-05-14 | Cshl | pacBioSII | Human | EmbryoHeart | CapTrap | PrimeScript II | Hv3 | 0+ | Total | True | 1 | 1 | False | GENCODE | 30 | NA | 1,101,226 | 977 | 1,119 | 5,398 | 99% | 1,016,397 | 93% | 93% | 14,805 | 1.46% | 1,141 | 4,639 | 100% | 25% | 60% | 8,555,300 | 1,250,535 | 15% | 2,534,530 | 30% | 2,275,786 | 27% | 1,308,450 | 15% | 304,086 | 4% | 881,913 | 10% | 839 | 766 | 62% | 511 | 61% | 213 | 25% | 541 | 64% | 913 | 3,974 | 885 | 2,693 | 920 | 3,974 | 143 | 67% | 836 | 2,994 | 954 | 2,268 | 800 | 2,994 | 120 | 110 | 56% |
| pacBioSII-Cshl-CapTrap_MpreCap_0+_EmbHeart01Rep1 | CRG_CRG0006_MMeHEART_20190130 | 2020-09-01 | 2021-06-10 | Cshl | pacBioSII | Mouse | EmbryoHeart | CapTrap | PrimeScript II | MpreCap | 0+ | Total | True | 1 | 1 | False | GENCODE | 30 | NA | 4,634,685 | 1,146 | 1,249 | 8,428 | 99% | 4,125,340 | 90% | 96% | 33,133 | 0.80% | 1,561 | 7,260 | 83% | 78% | 71% | 26,780,797 | 1,436,228 | 5% | 11,178,552 | 42% | 9,451,280 | 35% | 1,608,233 | 6% | 86,072 | 0% | 3,020,432 | 11% | 1,065 | 232 | 55% | 418 | 39% | 263 | 25% | 803 | 75% | 806 | 5,203 | 676 | 5,203 | 991 | 5,095 | 199 | 76% | 891 | 4,968 | 902 | 4,968 | 840 | 3,625 | 134 | 29 | 51% |
| pacBioSII-Cshl-CapTrap_Mv2_0+_EmbHeart01Rep1 | CRG_CRG0006_MMeHEART_20190130 | 2020-09-01 | 2021-05-14 | Cshl | pacBioSII | Mouse | EmbryoHeart | CapTrap | PrimeScript II | Mv2 | 0+ | Total | True | 1 | 1 | False | GENCODE | 30 | NA | 1,374,575 | 986 | 1,082 | 5,785 | 100% | 1,220,328 | 89% | 92% | 14,728 | 1.21% | 1,073 | 5,226 | 100% | 34% | 60% | 9,111,546 | 2,098,748 | 23% | 2,836,401 | 31% | 2,267,547 | 25% | 986,355 | 11% | 107,033 | 1% | 815,462 | 9% | 1,585 | 1,157 | 73% | 937 | 59% | 372 | 23% | 1,092 | 69% | 915 | 4,039 | 906 | 3,642 | 915 | 4,039 | 263 | 71% | 851 | 4,039 | 942 | 2,823 | 818 | 4,039 | 227 | 166 | 61% |
| ont-Crg-CapTrap_HpreCap_0+_EmbLiver01Rep1 | Clontech_636540_HSeLIVER_1405005 | 2020-06-03 | 2020-12-11 | Crg | ONT | Human | EmbryoLiver | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 11,500,843 | 725 | 842 | 12,491 | 99% | 7,141,571 | 63% | 98% | 20,644 | 0.29% | 729 | 4,373 | 25% | 60% | 70% | 8,201,202 | 268,998 | 3% | 3,641,078 | 44% | 2,896,775 | 35% | 713,330 | 9% | 102,379 | 1% | 578,642 | 7% | 563 | 49 | 36% | 384 | 68% | 164 | 29% | 416 | 74% | 488 | 2,315 | 506 | 1,706 | 487 | 2,315 | 127 | 77% | 603 | 1,923 | 636 | 1,455 | 570 | 1,923 | 106 | 9 | 65% |
| ont-Crg-CapTrap_Hv3_0+_EmbLiver01Rep1 | Clontech_636540_HSeLIVER_1405005 | 2020-10-13 | 2020-12-15 | Crg | ONT | Human | EmbryoLiver | CapTrap | PrimeScript II | Hv3 | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 15,330,712 | 782 | 958 | 11,004 | 99% | 8,389,266 | 55% | 94% | 50,207 | 0.60% | 760 | 4,561 | 61% | 41% | 55% | 13,573,236 | 2,968,098 | 22% | 2,910,214 | 21% | 2,715,395 | 20% | 2,152,256 | 16% | 573,731 | 4% | 2,253,542 | 17% | 3,465 | 228 | 55% | 2,239 | 65% | 581 | 17% | 2,261 | 65% | 615 | 2,766 | 548 | 2,689 | 626 | 2,766 | 392 | 67% | 646 | 2,225 | 609 | 2,177 | 666 | 2,225 | 357 | 23 | 61% |
| ont-Crg-CapTrap_MpreCap_0+_EmbLiver01Rep1 | CRG_CRG0007_MMeLIVER_20190130 | 2020-04-27 | 2020-12-10 | Crg | ONT | Mouse | EmbryoLiver | CapTrap | PrimeScript II | MpreCap | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 13,617,934 | 766 | 952 | 11,993 | 99% | 7,615,040 | 57% | 95% | 32,498 | 0.43% | 894 | 5,075 | 17% | 69% | 68% | 14,451,628 | 951,743 | 7% | 6,197,108 | 43% | 4,962,224 | 34% | 862,614 | 6% | 173,671 | 1% | 1,304,268 | 9% | 1,465 | 109 | 50% | 870 | 59% | 374 | 26% | 1,078 | 74% | 586 | 3,316 | 520 | 3,316 | 616 | 3,232 | 266 | 71% | 629 | 2,971 | 592 | 1,812 | 645 | 2,971 | 229 | 17 | 61% |
| ont-Crg-CapTrap_Mv2_0+_EmbLiver01Rep1 | CRG_CRG0007_MMeLIVER_20190130 | 2020-05-20 | 2020-12-12 | Crg | ONT | Mouse | EmbryoLiver | CapTrap | PrimeScript II | Mv2 | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 11,402,174 | 1,056 | 1,195 | 10,791 | 99% | 5,198,753 | 46% | 90% | 41,823 | 0.80% | 855 | 4,926 | 48% | 46% | 52% | 14,902,736 | 4,946,241 | 33% | 3,300,167 | 22% | 2,817,591 | 19% | 1,540,628 | 10% | 374,466 | 3% | 1,923,643 | 13% | 4,991 | 443 | 70% | 2,832 | 57% | 958 | 19% | 3,201 | 64% | 748 | 4,182 | 642 | 4,182 | 785 | 2,955 | 647 | 68% | 779 | 4,182 | 684 | 4,182 | 813 | 2,882 | 559 | 50 | 58% |
| pacBioSII-Cshl-CapTrap_HpreCap_0+_EmbLiver01Rep1 | Clontech_636540_HSeLIVER_1405005 | 2020-09-01 | 2021-06-10 | Cshl | pacBioSII | Human | EmbryoLiver | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 1 | 1 | False | GENCODE | 30 | NA | 4,600,401 | 673 | 818 | 6,865 | 100% | 4,419,750 | 97% | 98% | 18,782 | 0.42% | 1,079 | 4,989 | 84% | 78% | 74% | 12,857,539 | 310,459 | 2% | 6,094,281 | 47% | 4,602,443 | 36% | 901,250 | 7% | 73,173 | 1% | 875,933 | 7% | 477 | 104 | 39% | 235 | 49% | 142 | 30% | 358 | 75% | 540 | 3,107 | 414 | 2,958 | 642 | 3,107 | 104 | 73% | 608 | 2,958 | 577 | 2,958 | 622 | 2,454 | 77 | 17 | 54% |
| pacBioSII-Cshl-CapTrap_Hv3_0+_EmbLiver01Rep1 | Clontech_636540_HSeLIVER_1405005 | 2020-09-01 | 2021-06-09 | Cshl | pacBioSII | Human | EmbryoLiver | CapTrap | PrimeScript II | Hv3 | 0+ | Total | True | 1 | 1 | False | GENCODE | 30 | NA | 2,177,105 | 833 | 972 | 4,809 | 100% | 2,011,400 | 93% | 95% | 19,639 | 0.98% | 966 | 4,561 | 97% | 44% | 58% | 9,185,335 | 1,613,138 | 18% | 2,539,400 | 28% | 2,114,849 | 23% | 1,427,057 | 16% | 313,705 | 3% | 1,177,186 | 13% | 1,415 | 651 | 61% | 844 | 60% | 298 | 21% | 946 | 67% | 777 | 2,762 | 768 | 2,679 | 784 | 2,762 | 210 | 70% | 777 | 2,679 | 829 | 2,679 | 750 | 2,354 | 171 | 79 | 57% |
| pacBioSII-Cshl-CapTrap_MpreCap_0+_EmbLiver01Rep1 | CRG_CRG0007_MMeLIVER_20190130 | 2020-09-01 | 2021-06-10 | Cshl | pacBioSII | Mouse | EmbryoLiver | CapTrap | PrimeScript II | MpreCap | 0+ | Total | True | 1 | 1 | False | GENCODE | 30 | NA | 5,701,518 | 934 | 1,109 | 8,165 | 99% | 5,185,818 | 92% | 96% | 27,636 | 0.53% | 1,330 | 6,955 | 76% | 84% | 72% | 20,314,518 | 1,024,014 | 5% | 9,199,302 | 45% | 6,919,158 | 34% | 1,107,356 | 5% | 89,277 | 0% | 1,975,411 | 10% | 1,108 | 196 | 54% | 495 | 45% | 316 | 29% | 852 | 77% | 691 | 4,861 | 536 | 4,861 | 808 | 3,612 | 241 | 76% | 784 | 3,409 | 685 | 3,172 | 842 | 3,409 | 178 | 31 | 56% |
| pacBioSII-Cshl-CapTrap_Mv2_0+_EmbLiver01Rep1 | CRG_CRG0007_MMeLIVER_20190130 | 2020-09-01 | 2021-05-14 | Cshl | pacBioSII | Mouse | EmbryoLiver | CapTrap | PrimeScript II | Mv2 | 0+ | Total | True | 1 | 1 | False | GENCODE | 30 | NA | 1,252,228 | 918 | 1,048 | 5,470 | 100% | 1,097,913 | 88% | 92% | 14,363 | 1.31% | 1,072 | 5,379 | 90% | 40% | 61% | 8,807,203 | 2,177,010 | 25% | 2,788,794 | 32% | 1,987,604 | 23% | 912,033 | 10% | 120,909 | 1% | 820,853 | 9% | 1,736 | 1,389 | 75% | 958 | 55% | 443 | 26% | 1,150 | 66% | 897 | 4,438 | 799 | 4,140 | 944 | 4,438 | 299 | 67% | 939 | 4,140 | 840 | 4,140 | 985 | 4,104 | 264 | 211 | 60% |
| ont-Crg-CapTrap_MpreCap_0+_EmbSC01Rep1 | CRG_CRG0008_MMeESC_20190130 | 2020-04-27 | 2020-12-10 | Crg | ONT | Mouse | EmbryoSC | CapTrap | PrimeScript II | MpreCap | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 16,521,843 | 761 | 940 | 13,899 | 99% | 7,142,053 | 44% | 92% | 43,547 | 0.61% | 907 | 5,578 | 18% | 69% | 65% | 17,584,941 | 1,396,009 | 8% | 7,101,752 | 40% | 6,110,613 | 35% | 934,771 | 5% | 303,769 | 2% | 1,738,027 | 10% | 2,632 | 162 | 52% | 1,187 | 45% | 381 | 14% | 2,181 | 83% | 494 | 5,390 | 236 | 5,390 | 607 | 3,371 | 294 | 77% | 596 | 2,950 | 527 | 2,435 | 616 | 2,950 | 219 | 13 | 57% |
| ont-Crg-CapTrap_Mv2_0+_EmbSC01Rep1 | CRG_CRG0008_MMeESC_20190130 | 2020-05-20 | 2020-12-11 | Crg | ONT | Mouse | EmbryoSC | CapTrap | PrimeScript II | Mv2 | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 9,430,952 | 1,038 | 1,174 | 13,590 | 99% | 3,932,007 | 42% | 87% | 34,164 | 0.87% | 809 | 4,863 | 56% | 57% | 53% | 11,584,567 | 3,039,176 | 26% | 3,102,783 | 27% | 2,748,559 | 24% | 1,079,955 | 9% | 370,269 | 3% | 1,243,825 | 11% | 3,361 | 361 | 68% | 1,966 | 58% | 566 | 17% | 2,348 | 70% | 690 | 3,110 | 566 | 2,817 | 726 | 3,110 | 385 | 68% | 736 | 2,969 | 728 | 2,817 | 742 | 2,969 | 341 | 37 | 60% |
| pacBioSII-Cshl-CapTrap_MpreCap_0+_EmbSC01Rep1 | CRG_CRG0008_MMeESC_20190130 | 2020-09-01 | 2021-06-10 | Cshl | pacBioSII | Mouse | EmbryoSC | CapTrap | PrimeScript II | MpreCap | 0+ | Total | True | 1 | 1 | False | GENCODE | 30 | NA | 3,611,599 | 991 | 1,138 | 7,508 | 99% | 2,878,189 | 81% | 93% | 26,642 | 0.93% | 1,311 | 6,452 | 84% | 82% | 69% | 18,906,933 | 926,422 | 5% | 8,840,905 | 47% | 6,710,067 | 35% | 841,895 | 4% | 97,164 | 1% | 1,490,480 | 8% | 1,559 | 438 | 57% | 361 | 23% | 174 | 11% | 1,408 | 90% | 229 | 5,392 | 203 | 5,392 | 760 | 3,869 | 139 | 80% | 748 | 3,340 | 668 | 2,776 | 813 | 3,340 | 92 | 26 | 53% |
| pacBioSII-Cshl-CapTrap_Mv2_0+_EmbSC01Rep1 | CRG_CRG0008_MMeESC_20190130 | 2020-09-01 | 2021-05-20 | Cshl | pacBioSII | Mouse | EmbryoSC | CapTrap | PrimeScript II | Mv2 | 0+ | Total | True | 1 | 1 | False | GENCODE | 30 | NA | 1,037,312 | 888 | 1,021 | 4,888 | 100% | 863,090 | 83% | 90% | 11,304 | 1.31% | 996 | 4,296 | 90% | 52% | 63% | 6,859,560 | 1,118,678 | 16% | 2,677,267 | 39% | 1,894,531 | 28% | 581,262 | 8% | 121,271 | 2% | 466,551 | 7% | 1,015 | 981 | 74% | 577 | 57% | 236 | 23% | 737 | 73% | 760 | 3,118 | 630 | 2,780 | 823 | 3,118 | 162 | 69% | 849 | 2,849 | 806 | 2,780 | 869 | 2,849 | 153 | 148 | 65% |
| ont-Crg-CapTrap_MpreCap_0+_F121-901Rep1 | ENCBS648HXY | 2020-09-07 | 2021-02-27 | Crg | ONT | Mouse | F121-9 | CapTrap | PrimeScript II | MpreCap | 0+ | Total | True | 1 | 1 | False | LRGASP | 10 | NA | 16,386,504 | 806 | 1,025 | 11,179 | 98% | 7,307,132 | 45% | 93% | 46,910 | 0.64% | 921 | 5,828 | 10% | 71% | 61% | 20,022,094 | 1,865,027 | 9% | 8,051,145 | 40% | 7,047,675 | 35% | 938,959 | 5% | 361,729 | 2% | 1,757,559 | 9% | 2,923 | 182 | 57% | 1,556 | 53% | 367 | 13% | 2,460 | 84% | 520 | 5,214 | 224 | 5,214 | 636 | 3,489 | 294 | 80% | 646 | 5,214 | 560 | 5,214 | 656 | 3,489 | 239 | 15 | 65% |
| ont-Crg-CapTrap_MpreCap_0+_F121-902Rep1 | ENCBS951CRC | 2020-09-07 | 2021-02-28 | Crg | ONT | Mouse | F121-9 | CapTrap | PrimeScript II | MpreCap | 0+ | Total | True | 2 | 1 | False | LRGASP | 10 | NA | 16,381,186 | 796 | 1,027 | 13,141 | 98% | 7,329,317 | 46% | 92% | 47,075 | 0.64% | 949 | 5,601 | 10% | 72% | 62% | 20,319,885 | 1,821,295 | 9% | 8,282,192 | 41% | 7,206,497 | 35% | 933,020 | 5% | 345,291 | 2% | 1,731,590 | 9% | 2,771 | 173 | 57% | 1,444 | 52% | 348 | 13% | 2,318 | 84% | 520 | 3,315 | 220 | 2,967 | 652 | 3,315 | 270 | 78% | 650 | 3,315 | 552 | 2,440 | 668 | 3,315 | 218 | 14 | 63% |
| ont-Crg-CapTrap_MpreCap_0+_F121-903Rep1 | ENCBS418RDP | 2020-09-10 | 2021-02-28 | Crg | ONT | Mouse | F121-9 | CapTrap | PrimeScript II | MpreCap | 0+ | Total | True | 3 | 1 | False | LRGASP | 10 | NA | 17,930,307 | 780 | 973 | 14,046 | 98% | 8,398,779 | 48% | 93% | 49,049 | 0.58% | 925 | 5,079 | 10% | 71% | 62% | 20,203,427 | 1,921,070 | 10% | 8,251,778 | 41% | 6,992,040 | 35% | 927,487 | 5% | 365,104 | 2% | 1,745,948 | 9% | 3,000 | 170 | 58% | 1,631 | 54% | 388 | 13% | 2,533 | 84% | 515 | 4,142 | 219 | 2,937 | 631 | 4,142 | 301 | 78% | 636 | 4,142 | 553 | 2,937 | 646 | 4,142 | 254 | 14 | 65% |
| ont-Ucsc-dRNA_MpreCap_0+_F121-901Rep1 | ENCBS648HXY | 2020-09-07 | 2021-05-11 | Ucsc | ONT | Mouse | F121-9 | directRNA | None | MpreCap | 0+ | Total | True | 1 | 1 | False | LRGASP | 10 | NA | 958,946 | 920 | 1,220 | 15,784 | 98% | 429,684 | 46% | 95% | 8,395 | 1.95% | 1,474 | 9,086 | 36% | 68% | 66% | 10,392,349 | 231,924 | 2% | 5,624,734 | 54% | 4,205,867 | 40% | 161,126 | 2% | 37,314 | 0% | 131,384 | 1% | 106 | 113 | 63% | 88 | 83% | 17 | 16% | 85 | 80% | 826 | 6,041 | 705 | 3,032 | 830 | 6,041 | 10 | 59% | 751 | 6,041 | 576 | 1,161 | 1,720 | 6,041 | 11 | 12 | 65% |
| ont-Ucsc-dRNA_MpreCap_0+_F121-902Rep1 | ENCBS951CRC | 2020-09-07 | 2021-05-11 | Ucsc | ONT | Mouse | F121-9 | directRNA | None | MpreCap | 0+ | Total | True | 2 | 1 | False | LRGASP | 10 | NA | 2,153,439 | 881 | 1,171 | 17,632 | 95% | 899,232 | 44% | 95% | 13,566 | 1.51% | 1,517 | 11,985 | 25% | 71% | 67% | 15,526,761 | 445,351 | 3% | 8,085,763 | 52% | 6,390,052 | 41% | 270,227 | 2% | 56,456 | 0% | 278,912 | 2% | 212 | 103 | 54% | 169 | 80% | 33 | 16% | 169 | 80% | 730 | 6,893 | 514 | 5,276 | 764 | 6,893 | 27 | 82% | 730 | 5,210 | 632 | 5,210 | 737 | 3,213 | 21 | 10 | 64% |
| ont-Ucsc-dRNA_MpreCap_0+_F121-903Rep1 | ENCBS418RDP | 2020-09-10 | 2021-05-12 | Ucsc | ONT | Mouse | F121-9 | directRNA | None | MpreCap | 0+ | Total | True | 3 | 1 | False | LRGASP | 10 | NA | 863,340 | 897 | 1,203 | 14,850 | 98% | 402,789 | 48% | 96% | 7,949 | 1.97% | 1,505 | 8,305 | 45% | 68% | 64% | 10,326,169 | 198,892 | 2% | 5,643,956 | 55% | 4,186,037 | 41% | 144,736 | 1% | 30,389 | 0% | 122,159 | 1% | 90 | 106 | 61% | 80 | 89% | 14 | 16% | 75 | 83% | 930 | 5,214 | 654 | 5,214 | 940 | 5,210 | 8 | 57% | 496 | 5,214 | 522 | 5,214 | 496 | 2,442 | 8 | 9 | 57% |
| ont-Ucsc-PcrOnt_MpreCap_1+_F121-901Rep1 | ENCBS648HXY | 2020-09-07 | 2021-05-06 | Ucsc | ONT | Mouse | F121-9 | PcrOnt | Maxima | MpreCap | 1+ | Total | True | 1 | 1 | False | LRGASP | 10 | NA | 14,868,929 | 676 | 845 | 46,027 | 79% | 4,919,189 | 42% | 79% | 59,993 | 1.22% | 593 | 11,672 | 10% | 72% | 43% | 25,687,047 | 3,405,681 | 13% | 9,531,206 | 37% | 8,228,308 | 32% | 926,839 | 4% | 278,590 | 1% | 3,316,423 | 13% | 19,768 | 1,678 | 47% | 2,927 | 15% | 275 | 1% | 19,273 | 97% | 200 | 5,381 | 197 | 5,381 | 243 | 5,320 | 228 | 83% | 667 | 5,248 | 518 | 5,248 | 700 | 4,535 | 176 | 15 | 64% |
| ont-Ucsc-PcrOnt_MpreCap_1+_F121-902Rep1 | ENCBS951CRC | 2020-09-07 | 2021-05-06 | Ucsc | ONT | Mouse | F121-9 | PcrOnt | Maxima | MpreCap | 1+ | Total | True | 2 | 1 | False | LRGASP | 10 | NA | 15,391,465 | 641 | 785 | 154,771 | 77% | 4,787,794 | 40% | 84% | 58,346 | 1.22% | 569 | 6,973 | 10% | 72% | 42% | 24,328,933 | 3,275,213 | 13% | 9,166,542 | 38% | 7,618,663 | 31% | 864,557 | 4% | 254,992 | 1% | 3,148,966 | 13% | 18,948 | 1,600 | 46% | 3,236 | 17% | 267 | 1% | 18,398 | 97% | 200 | 6,543 | 197 | 5,318 | 257 | 6,543 | 215 | 81% | 571 | 5,255 | 362 | 5,255 | 624 | 4,743 | 173 | 15 | 65% |
| ont-Ucsc-PcrOnt_MpreCap_1+_F121-903Rep1 | ENCBS418RDP | 2020-09-10 | 2021-05-05 | Ucsc | ONT | Mouse | F121-9 | PcrOnt | Maxima | MpreCap | 1+ | Total | True | 3 | 1 | False | LRGASP | 10 | NA | 26,795,189 | 667 | 812 | 318,722 | 79% | 9,239,859 | 44% | 83% | 95,161 | 1.03% | 638 | 8,353 | 9% | 72% | 42% | 35,578,020 | 5,495,488 | 15% | 12,137,147 | 34% | 10,591,448 | 30% | 1,410,970 | 4% | 349,770 | 1% | 5,593,197 | 16% | 28,332 | 1,335 | 46% | 5,641 | 20% | 425 | 2% | 27,242 | 96% | 203 | 6,875 | 198 | 6,875 | 274 | 6,036 | 327 | 77% | 598 | 6,036 | 417 | 2,966 | 656 | 6,036 | 263 | 12 | 62% |
| ont-Ucsc-R2C2_MpreCap_0+_F121-901Rep1 | ENCBS648HXY | 2020-09-07 | 2021-06-01 | Ucsc | ONT | Mouse | F121-9 | R2C2 | SMART MMLV | MpreCap | 0+ | Total | True | 1 | 1 | False | LRGASP | 10 | NA | 1,188,203 | 1,305 | 1,478 | 12,502 | 99% | 989,986 | 84% | 91% | 18,092 | 1.83% | 1,636 | 8,317 | 54% | 71% | 80% | 20,015,104 | 688,639 | 3% | 10,619,332 | 53% | 7,051,857 | 35% | 555,998 | 3% | 126,902 | 1% | 972,376 | 5% | 1,116 | 945 | 53% | 194 | 17% | 105 | 9% | 1,061 | 95% | 221 | 5,343 | 210 | 5,343 | 862 | 5,296 | 79 | 75% | 818 | 5,210 | 821 | 5,210 | 798 | 3,301 | 51 | 43 | 49% |
| ont-Ucsc-R2C2_MpreCap_0+_F121-902Rep1 | ENCBS951CRC | 2020-09-07 | 2021-06-01 | Ucsc | ONT | Mouse | F121-9 | R2C2 | SMART MMLV | MpreCap | 0+ | Total | True | 2 | 1 | False | LRGASP | 10 | NA | 1,385,825 | 1,315 | 1,485 | 11,731 | 100% | 1,158,168 | 84% | 92% | 19,350 | 1.67% | 1,675 | 9,117 | 55% | 71% | 81% | 20,973,688 | 729,588 | 3% | 11,046,620 | 53% | 7,510,194 | 36% | 557,255 | 3% | 139,656 | 1% | 990,375 | 5% | 941 | 682 | 52% | 219 | 23% | 108 | 11% | 895 | 95% | 244 | 5,302 | 214 | 5,302 | 844 | 5,229 | 91 | 84% | 822 | 5,246 | 894 | 5,246 | 762 | 3,884 | 64 | 46 | 59% |
| ont-Ucsc-R2C2_MpreCap_0+_F121-903Rep1 | ENCBS418RDP | 2020-09-10 | 2021-06-01 | Ucsc | ONT | Mouse | F121-9 | R2C2 | SMART MMLV | MpreCap | 0+ | Total | True | 3 | 1 | False | LRGASP | 10 | NA | 1,278,902 | 1,334 | 1,496 | 17,090 | 100% | 1,074,405 | 84% | 92% | 18,381 | 1.71% | 1,683 | 8,315 | 51% | 69% | 81% | 20,227,039 | 653,374 | 3% | 10,800,379 | 53% | 7,281,131 | 36% | 513,032 | 3% | 138,058 | 1% | 841,065 | 4% | 832 | 653 | 54% | 212 | 25% | 107 | 13% | 774 | 93% | 250 | 5,767 | 213 | 5,767 | 757 | 5,280 | 85 | 79% | 770 | 5,767 | 820 | 5,767 | 704 | 2,940 | 53 | 42 | 50% |
| pacBioSII-Uci-CapTrap_MpreCap_0+_F121-901Rep1 | ENCBS944CBA | 2021-05-01 | 2021-05-30 | Uci | pacBioSII | Mouse | F121-9 | CapTrap | PrimeScript II | MpreCap | 0+ | Total | True | 1 | 1 | False | LRGASP | 30 | NA | 885,020 | 953 | 1,132 | 8,300 | 98% | 696,231 | 80% | 90% | 11,959 | 1.72% | 1,271 | 5,640 | 82% | 87% | 71% | 11,575,081 | 401,007 | 3% | 6,084,167 | 53% | 4,329,065 | 37% | 291,030 | 3% | 82,383 | 1% | 387,429 | 3% | 737 | 849 | 58% | 154 | 21% | 71 | 10% | 687 | 93% | 206 | 3,489 | 198 | 2,819 | 681 | 3,489 | 62 | 87% | 651 | 3,489 | 682 | 2,322 | 651 | 3,489 | 49 | 56 | 69% |
| pacBioSII-Uci-CapTrap_MpreCap_0+_F121-902Rep1 | ENCBS593PKA | 2021-05-01 | 2021-05-31 | Uci | pacBioSII | Mouse | F121-9 | CapTrap | PrimeScript II | MpreCap | 0+ | Total | True | 2 | 1 | False | LRGASP | 30 | NA | 2,717,322 | 995 | 1,132 | 7,432 | 98% | 2,157,697 | 81% | 91% | 22,567 | 1.05% | 1,247 | 5,731 | 69% | 85% | 65% | 17,051,095 | 941,843 | 6% | 8,188,495 | 48% | 6,246,531 | 37% | 578,762 | 3% | 137,446 | 1% | 958,018 | 6% | 1,763 | 660 | 57% | 394 | 22% | 160 | 9% | 1,634 | 93% | 209 | 5,241 | 197 | 5,241 | 760 | 3,316 | 128 | 80% | 774 | 3,316 | 717 | 2,958 | 778 | 3,316 | 104 | 39 | 65% |
| pacBioSII-Uci-CapTrap_MpreCap_0+_F121-903Rep1 | ENCBS474NOC | 2021-05-01 | 2021-05-30 | Uci | pacBioSII | Mouse | F121-9 | CapTrap | PrimeScript II | MpreCap | 0+ | Total | True | 3 | 1 | False | LRGASP | 30 | NA | 1,382,528 | 1,087 | 1,226 | 7,469 | 99% | 1,115,226 | 82% | 92% | 15,326 | 1.37% | 1,391 | 5,806 | 78% | 87% | 73% | 14,251,902 | 566,037 | 4% | 7,354,199 | 52% | 5,313,399 | 37% | 392,421 | 3% | 98,789 | 1% | 527,057 | 4% | 785 | 575 | 59% | 209 | 27% | 101 | 13% | 724 | 92% | 221 | 3,479 | 202 | 2,819 | 781 | 3,479 | 89 | 88% | 726 | 3,313 | 801 | 2,487 | 675 | 3,313 | 72 | 53 | 71% |
| pacBioSII-Uci-SmartSeq2_MpreCap_0+_F121-901Rep1 | ENCBS944CBA | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Mouse | F121-9 | SmartSeq2 | Maxima | MpreCap | 0+ | Total | True | 1 | 1 | False | LRGASP | 30 | NA | 2,000,515 | 1,658 | 1,969 | 18,171 | 92% | 1,532,477 | 83% | 83% | 34,044 | 2.22% | 1,885 | 14,373 | 79% | 88% | 60% | 37,704,717 | 2,789,902 | 7% | 16,495,845 | 44% | 13,446,429 | 36% | 1,109,353 | 3% | 143,311 | 0% | 3,719,877 | 10% | 9,803 | 5,340 | 50% | 312 | 3% | 103 | 1% | 9,757 | 100% | 192 | 10,290 | 191 | 8,067 | 1,634 | 10,290 | 90 | 87% | 1,712 | 7,314 | 1,063 | 5,767 | 2,353 | 7,314 | 68 | 37 | 66% |
| pacBioSII-Uci-SmartSeq2_MpreCap_0+_F121-901Rep2 | ENCBS944CBA | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Mouse | F121-9 | SmartSeq2 | Maxima | MpreCap | 0+ | Total | True | 1 | 2 | False | LRGASP | 30 | NA | 974,705 | 1,757 | 2,010 | 23,650 | 92% | 754,201 | 84% | 85% | 22,261 | 2.95% | 1,910 | 12,016 | 87% | 88% | 65% | 29,685,399 | 1,690,966 | 6% | 14,196,017 | 48% | 11,091,088 | 37% | 679,052 | 2% | 98,557 | 0% | 1,929,719 | 7% | 5,988 | 6,681 | 49% | 157 | 3% | 68 | 1% | 5,968 | 100% | 192 | 8,066 | 192 | 8,066 | 1,987 | 7,006 | 64 | 94% | 2,414 | 6,085 | 1,234 | 5,609 | 2,567 | 6,085 | 46 | 51 | 68% |
| pacBioSII-Uci-SmartSeq2_MpreCap_0+_F121-901Rep3 | ENCBS944CBA | 2021-05-01 | 2021-07-21 | Uci | pacBioSII | Mouse | F121-9 | SmartSeq2 | Maxima | MpreCap | 0+ | Total | True | 1 | 3 | False | LRGASP | 30 | NA | 1,111,767 | 1,768 | 2,050 | 16,962 | 94% | 898,246 | 86% | 87% | 23,233 | 2.59% | 1,978 | 14,306 | 84% | 87% | 67% | 30,822,232 | 1,794,122 | 6% | 14,647,427 | 48% | 11,544,192 | 37% | 726,811 | 2% | 103,446 | 0% | 2,006,234 | 7% | 5,474 | 5,226 | 49% | 156 | 3% | 62 | 1% | 5,448 | 100% | 193 | 10,032 | 192 | 10,032 | 2,166 | 7,638 | 58 | 94% | 2,418 | 7,638 | 1,125 | 5,063 | 2,683 | 7,638 | 42 | 40 | 68% |
| pacBioSII-Uci-SmartSeq2_MpreCap_0+_F121-902Rep1 | ENCBS593PKA | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Mouse | F121-9 | SmartSeq2 | Maxima | MpreCap | 0+ | Total | True | 2 | 1 | False | LRGASP | 30 | NA | 528,882 | 1,876 | 2,089 | 17,177 | 94% | 425,092 | 86% | 88% | 15,125 | 3.56% | 2,038 | 11,339 | 88% | 87% | 72% | 23,564,994 | 1,080,841 | 5% | 12,025,708 | 51% | 9,095,909 | 39% | 369,604 | 2% | 74,543 | 0% | 918,389 | 4% | 3,164 | 6,375 | 51% | 89 | 3% | 35 | 1% | 3,150 | 100% | 193 | 7,042 | 193 | 7,042 | 2,332 | 6,066 | 31 | 89% | 2,152 | 6,066 | 1,120 | 5,247 | 2,399 | 6,066 | 25 | 50 | 71% |
| pacBioSII-Uci-SmartSeq2_MpreCap_0+_F121-902Rep2 | ENCBS593PKA | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Mouse | F121-9 | SmartSeq2 | Maxima | MpreCap | 0+ | Total | True | 2 | 2 | False | LRGASP | 30 | NA | 841,876 | 1,616 | 1,886 | 18,709 | 91% | 636,757 | 83% | 84% | 19,989 | 3.14% | 1,813 | 11,995 | 87% | 88% | 65% | 26,997,126 | 1,460,616 | 5% | 13,302,983 | 49% | 10,243,452 | 38% | 494,108 | 2% | 99,155 | 0% | 1,396,812 | 5% | 5,536 | 7,244 | 50% | 131 | 2% | 50 | 1% | 5,512 | 100% | 192 | 7,641 | 192 | 7,042 | 1,616 | 7,641 | 46 | 92% | 1,824 | 7,641 | 915 | 5,957 | 1,992 | 7,641 | 37 | 48 | 74% |
| pacBioSII-Uci-SmartSeq2_MpreCap_0+_F121-902Rep3 | ENCBS593PKA | 2021-05-01 | 2021-07-21 | Uci | pacBioSII | Mouse | F121-9 | SmartSeq2 | Maxima | MpreCap | 0+ | Total | True | 2 | 3 | False | LRGASP | 30 | NA | 1,100,177 | 2,419 | 2,556 | 20,468 | 96% | 922,298 | 87% | 91% | 23,438 | 2.54% | 2,483 | 15,551 | 89% | 87% | 72% | 33,191,717 | 1,884,800 | 6% | 15,554,662 | 47% | 12,583,151 | 38% | 778,060 | 2% | 121,488 | 0% | 2,269,556 | 7% | 4,328 | 4,099 | 50% | 153 | 4% | 63 | 1% | 4,306 | 99% | 193 | 7,705 | 193 | 7,128 | 2,418 | 7,705 | 56 | 89% | 2,335 | 7,307 | 1,221 | 5,615 | 2,448 | 7,307 | 44 | 42 | 70% |
| pacBioSII-Uci-SmartSeq2_MpreCap_0+_F121-903Rep1 | ENCBS474NOC | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Mouse | F121-9 | SmartSeq2 | Maxima | MpreCap | 0+ | Total | True | 3 | 1 | False | LRGASP | 30 | NA | 609,254 | 1,869 | 2,049 | 17,300 | 94% | 491,642 | 86% | 88% | 16,220 | 3.30% | 2,011 | 10,805 | 92% | 88% | 71% | 24,041,056 | 1,117,529 | 5% | 12,174,783 | 51% | 9,279,423 | 39% | 408,229 | 2% | 86,659 | 0% | 974,433 | 4% | 3,499 | 6,116 | 50% | 108 | 3% | 43 | 1% | 3,482 | 100% | 193 | 7,293 | 193 | 7,042 | 2,224 | 7,293 | 39 | 91% | 2,063 | 7,293 | 800 | 2,965 | 2,410 | 7,293 | 34 | 59 | 79% |
| pacBioSII-Uci-SmartSeq2_MpreCap_0+_F121-903Rep2 | ENCBS474NOC | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Mouse | F121-9 | SmartSeq2 | Maxima | MpreCap | 0+ | Total | True | 3 | 2 | False | LRGASP | 30 | NA | 739,415 | 1,949 | 2,140 | 23,622 | 94% | 592,273 | 85% | 88% | 18,463 | 3.12% | 2,075 | 12,020 | 91% | 87% | 69% | 26,978,496 | 1,405,277 | 5% | 13,378,395 | 50% | 10,381,464 | 38% | 474,706 | 2% | 84,751 | 0% | 1,253,903 | 5% | 4,270 | 6,163 | 51% | 118 | 3% | 46 | 1% | 4,249 | 100% | 193 | 8,506 | 192 | 8,506 | 2,464 | 7,285 | 42 | 91% | 2,423 | 7,285 | 912 | 5,399 | 2,571 | 7,285 | 36 | 52 | 78% |
| pacBioSII-Uci-SmartSeq2_MpreCap_0+_F121-903Rep3 | ENCBS474NOC | 2021-05-01 | 2021-07-20 | Uci | pacBioSII | Mouse | F121-9 | SmartSeq2 | Maxima | MpreCap | 0+ | Total | True | 3 | 3 | False | LRGASP | 30 | NA | 721,036 | 2,461 | 2,690 | 18,126 | 97% | 612,023 | 88% | 92% | 18,013 | 2.94% | 2,552 | 14,385 | 90% | 84% | 77% | 29,936,707 | 1,478,008 | 5% | 14,711,926 | 49% | 11,640,386 | 39% | 592,384 | 2% | 96,017 | 0% | 1,417,986 | 5% | 2,643 | 3,797 | 50% | 101 | 4% | 44 | 2% | 2,631 | 100% | 194 | 8,062 | 194 | 8,062 | 2,646 | 7,302 | 41 | 93% | 2,581 | 7,302 | 1,276 | 5,612 | 2,736 | 7,302 | 29 | 42 | 66% |
| ont-Crg-CapTrap_HpreCap_0+_Heart01Rep1 | AM7966_HSaHEART_1866106 | 2018-10-05 | 2020-12-04 | Crg | ONT | Human | Heart | CapTrap | PrimeScript II | HpreCap | 0+ | Total | False | 1 | 1 | True | GENCODE-BENCHMARK | 10 | NA | 295,021 | 700 | 794 | 6,065 | 100% | 126,210 | 43% | 96% | 2,224 | 1.76% | 677 | 3,099 | NA | 0% | 74% | 1,384,329 | 16,659 | 1% | 704,966 | 51% | 566,482 | 41% | 60,225 | 4% | 14,458 | 1% | 21,539 | 2% | 31 | 105 | 52% | 26 | 84% | 6 | 19% | 27 | 87% | 433 | 1,864 | 366 | 767 | 442 | 1,864 | 4 | 67% | 366 | 724 | 338 | 366 | 499 | 724 | 4 | 14 | 67% |
| ont-Crg-CapTrap_HpreCap_0+_Heart02Rep1 | Ambion_AM7966_HSaHEART_1906770 | 2020-05-25 | 2020-12-11 | Crg | ONT | Human | Heart | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 2 | 1 | False | GENCODE | 10 | NA | 14,354,114 | 858 | 950 | 14,064 | 99% | 8,436,179 | 59% | 97% | 37,743 | 0.45% | 858 | 4,962 | 17% | 71% | 71% | 14,950,138 | 634,773 | 4% | 6,102,610 | 41% | 5,749,862 | 38% | 1,250,112 | 8% | 161,837 | 1% | 1,050,944 | 7% | 1,068 | 75 | 36% | 776 | 73% | 88 | 8% | 795 | 74% | 558 | 3,111 | 435 | 2,364 | 578 | 3,111 | 73 | 83% | 612 | 3,111 | 698 | 2,364 | 593 | 3,111 | 64 | 4 | 73% |
| ont-Crg-CapTrap_Hv3_0+_Heart02Rep1 | Ambion_AM7966_HSaHEART_1906770 | 2020-09-21 | 2020-12-14 | Crg | ONT | Human | Heart | CapTrap | PrimeScript II | Hv3 | 0+ | Total | True | 2 | 1 | False | GENCODE | 10 | NA | 8,962,005 | 1,216 | 1,316 | 12,278 | 99% | 4,690,850 | 53% | 94% | 41,256 | 0.88% | 832 | 4,453 | 52% | 48% | 57% | 12,853,419 | 2,765,878 | 22% | 3,119,415 | 24% | 2,928,671 | 23% | 1,992,382 | 16% | 527,477 | 4% | 1,519,596 | 12% | 2,631 | 295 | 58% | 1,937 | 74% | 427 | 16% | 1,713 | 65% | 719 | 3,018 | 670 | 3,018 | 729 | 2,916 | 302 | 71% | 738 | 2,916 | 696 | 2,045 | 744 | 2,916 | 305 | 34 | 71% |
| ont-Crg-CapTrap_MpreCap_0+_Heart01Rep1 | CRG_CRG0002_MMaHEART_20180919 | 2020-04-30 | 2020-12-11 | Crg | ONT | Mouse | Heart | CapTrap | PrimeScript II | MpreCap | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 8,850,662 | 1,368 | 1,457 | 12,877 | 99% | 4,663,257 | 53% | 95% | 28,930 | 0.62% | 976 | 4,564 | 20% | 69% | 67% | 13,828,640 | 917,714 | 7% | 5,540,033 | 40% | 5,373,444 | 39% | 752,113 | 5% | 179,096 | 1% | 1,066,240 | 8% | 1,145 | 131 | 50% | 729 | 64% | 289 | 25% | 810 | 71% | 673 | 3,342 | 647 | 3,342 | 678 | 2,876 | 221 | 76% | 699 | 2,862 | 748 | 2,639 | 684 | 2,862 | 195 | 22 | 67% |
| ont-Crg-CapTrap_Mv2_0+_Heart01Rep1 | CRG_CRG0002_MMaHEART_20180919 | 2020-06-17 | 2020-12-12 | Crg | ONT | Mouse | Heart | CapTrap | PrimeScript II | Mv2 | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 6,306,325 | 1,107 | 1,193 | 12,720 | 99% | 3,063,222 | 49% | 87% | 31,456 | 1.03% | 771 | 4,079 | 64% | 44% | 48% | 11,691,145 | 4,038,614 | 35% | 2,505,501 | 21% | 2,460,100 | 21% | 1,206,164 | 10% | 274,713 | 2% | 1,206,053 | 10% | 4,762 | 763 | 74% | 2,090 | 44% | 779 | 16% | 2,598 | 55% | 687 | 3,399 | 610 | 3,255 | 727 | 3,399 | 459 | 59% | 707 | 3,244 | 686 | 2,322 | 713 | 3,244 | 371 | 59 | 48% |
| ont-Crg-Smarter_HpreCap_0+_Heart01Rep1 | AM7966_HSaHEART_1866106 | 2019-04-10 | 2020-12-14 | Crg | ONT | Human | Heart | SMARTer | SMARTScribe | HpreCap | 0+ | Total | False | 1 | 1 | True | GENCODE-BENCHMARK | 10 | NA | 412,734 | 818 | 960 | 24,073 | 91% | 158,564 | 42% | 24% | 4,259 | 2.69% | 530 | 4,101 | 42% | 34% | 32% | 2,461,871 | 71,413 | 3% | 417,572 | 17% | 1,768,418 | 72% | 87,395 | 4% | 19,689 | 1% | 97,384 | 4% | 242 | 641 | 42% | 10 | 4% | 30 | 12% | 203 | 84% | 474 | 2,495 | 470 | 2,495 | 652 | 954 | 26 | 87% | 864 | 1,760 | 953 | 1,760 | 409 | 747 | 3 | 8 | 10% |
| ont-Cshl-CapTrap_HpreCap_0+_Heart01Rep1 | AM7966_HSaHEART_1866106 | 2018-09-03 | 2020-12-16 | Cshl | ONT | Human | Heart | CapTrap | PrimeScript II | HpreCap | 0+ | Total | False | 1 | 1 | True | GENCODE-BENCHMARK | 10 | NA | 6,103,458 | 853 | 932 | 12,715 | 99% | 3,419,924 | 57% | 97% | 15,127 | 0.44% | 880 | 4,573 | NA | 0% | 66% | 9,428,314 | 258,524 | 3% | 4,084,937 | 43% | 4,016,477 | 43% | 595,056 | 6% | 74,930 | 1% | 398,390 | 4% | 371 | 61 | 46% | 235 | 63% | 93 | 25% | 292 | 79% | 554 | 3,286 | 506 | 2,011 | 578 | 3,286 | 74 | 80% | 626 | 3,286 | 638 | 1,123 | 589 | 3,286 | 68 | 11 | 73% |
| ont-Cshl-dRNA_HpreCap_0+_Heart01Rep1 | AM7966_HSaHEART_1866106 | 2018-09-03 | 2020-12-05 | Cshl | ONT | Human | Heart | directRNA | None | HpreCap | 0+ | Total | False | 1 | 1 | True | GENCODE-BENCHMARK | 10 | NA | 685,718 | 515 | 618 | 5,998 | 93% | 154,264 | 24% | 98% | 2,310 | 1.50% | 781 | 3,551 | 51% | 43% | 16% | 1,819,589 | 7,498 | 0% | 1,010,590 | 56% | 734,063 | 40% | 54,120 | 3% | 3,510 | 0% | 9,808 | 1% | 18 | 28 | 50% | 13 | 72% | 5 | 28% | 9 | 50% | 429 | 944 | 352 | 498 | 474 | 944 | 1 | 20% | 352 | 498 | 352 | 498 | NA | NA | 0 | 0 | 0% |
| ont-Cshl-Smarter_HpreCap_0+_Heart01Rep1 | AM7966_HSaHEART_1866106 | 2018-09-03 | 2020-12-07 | Cshl | ONT | Human | Heart | SMARTer | SMARTScribe | HpreCap | 0+ | Total | False | 1 | 1 | True | GENCODE-BENCHMARK | 10 | NA | 5,219,754 | 617 | 736 | 10,010 | 94% | 3,031,187 | 62% | 38% | 24,121 | 0.80% | 709 | 6,368 | 39% | 60% | 30% | 15,182,663 | 871,531 | 6% | 3,637,243 | 24% | 8,415,078 | 55% | 727,066 | 5% | 90,667 | 1% | 1,441,078 | 9% | 3,438 | 704 | 31% | 164 | 5% | 221 | 6% | 2,851 | 83% | 533 | 4,456 | 529 | 4,456 | 588 | 2,997 | 196 | 89% | 802 | 3,049 | 836 | 3,049 | 686 | 2,997 | 38 | 8 | 17% |
| pacBio-Cshl-CapTrap_HpreCap_0+_Heart01Rep1 | AM7966_HSaHEART_1866106 | 2018-09-03 | 2019-02-14 | Cshl | pacBioSI | Human | Heart | CapTrap | PrimeScript II | HpreCap | 0+ | Total | False | 1 | 1 | True | GENCODE-BENCHMARK | 10 | NA | 463,193 | 998 | 1,142 | 8,715 | 100% | 428,064 | 92% | 98% | 5,841 | 1.36% | 1,215 | 5,009 | NA | 0% | 85% | 5,744,226 | 59,753 | 1% | 3,055,133 | 53% | 2,360,964 | 41% | 163,368 | 3% | 16,456 | 0% | 88,552 | 2% | 51 | 110 | 61% | 39 | 76% | 18 | 35% | 40 | 78% | 827 | 2,181 | 807 | 1,062 | 827 | 2,181 | 16 | 89% | 894 | 2,181 | 830 | 1,062 | 1,041 | 2,181 | 13 | 28 | 72% |
| pacBio-Cshl-Smarter_HpreCap_0+_Heart01Rep1 | AM7966_HSaHEART_1866106 | 2018-09-03 | 2019-02-14 | Cshl | pacBioSI | Human | Heart | SMARTer | SMARTScribe | HpreCap | 0+ | Total | False | 1 | 1 | True | GENCODE-BENCHMARK | 10 | NA | 503,212 | 1,065 | 1,195 | 11,417 | 100% | 459,643 | 91% | 62% | 8,553 | 1.86% | 1,132 | 5,525 | 75% | 65% | 56% | 8,416,045 | 260,961 | 3% | 3,071,388 | 36% | 4,366,659 | 52% | 266,122 | 3% | 19,885 | 0% | 431,030 | 5% | 542 | 1,079 | 35% | 36 | 7% | 78 | 14% | 520 | 96% | 1,022 | 4,427 | 1,022 | 4,427 | 1,085 | 3,099 | 74 | 95% | 1,162 | 3,099 | 1,132 | 2,535 | 1,541 | 3,099 | 9 | 18 | 12% |
| pacBioSII-Cshl-CapTrap_HpreCap_0+_Heart02Rep1 | Ambion_AM7966_HSaHEART_1906770 | 2020-09-01 | 2021-06-09 | Cshl | pacBioSII | Human | Heart | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 2 | 1 | False | GENCODE | 30 | NA | 3,138,944 | 908 | 1,015 | 7,600 | 100% | 3,012,851 | 96% | 98% | 19,048 | 0.63% | 1,169 | 5,465 | 83% | 85% | 77% | 13,578,681 | 332,699 | 2% | 6,454,002 | 48% | 5,360,685 | 39% | 821,600 | 6% | 63,422 | 0% | 546,273 | 4% | 351 | 112 | 46% | 237 | 68% | 103 | 29% | 279 | 79% | 674 | 3,103 | 640 | 2,193 | 689 | 3,103 | 84 | 82% | 722 | 3,103 | 741 | 1,906 | 713 | 3,103 | 64 | 20 | 62% |
| pacBioSII-Cshl-CapTrap_Hv3_0+_Heart02Rep1 | Ambion_AM7966_HSaHEART_1906770 | 2020-09-01 | 2021-06-10 | Cshl | pacBioSII | Human | Heart | CapTrap | PrimeScript II | Hv3 | 0+ | Total | True | 2 | 1 | False | GENCODE | 30 | NA | 2,237,466 | 991 | 1,119 | 5,700 | 100% | 2,098,356 | 94% | 95% | 21,021 | 1.00% | 1,103 | 5,343 | 95% | 53% | 60% | 11,269,242 | 1,848,239 | 16% | 3,494,692 | 31% | 2,894,244 | 26% | 1,631,269 | 14% | 367,525 | 3% | 1,033,273 | 9% | 1,234 | 553 | 64% | 829 | 67% | 243 | 20% | 833 | 68% | 915 | 3,235 | 890 | 3,188 | 918 | 3,235 | 174 | 72% | 864 | 3,011 | 918 | 2,405 | 841 | 3,011 | 167 | 75 | 69% |
| pacBioSII-Cshl-CapTrap_MpreCap_0+_Heart01Rep1 | CRG_CRG0002_MMaHEART_20180919 | 2020-09-01 | 2021-06-10 | Cshl | pacBioSII | Mouse | Heart | CapTrap | PrimeScript II | MpreCap | 0+ | Total | True | 1 | 1 | False | GENCODE | 30 | NA | 5,006,707 | 979 | 1,105 | 9,274 | 99% | 4,548,771 | 92% | 95% | 27,815 | 0.61% | 1,306 | 6,058 | 83% | 84% | 66% | 20,524,536 | 1,285,679 | 6% | 8,516,813 | 41% | 7,810,544 | 38% | 1,049,707 | 5% | 82,582 | 0% | 1,779,211 | 9% | 1,273 | 256 | 56% | 572 | 45% | 296 | 23% | 950 | 75% | 720 | 3,857 | 605 | 3,857 | 811 | 3,629 | 220 | 74% | 773 | 3,857 | 787 | 3,857 | 763 | 3,439 | 178 | 36 | 60% |
| pacBioSII-Cshl-CapTrap_Mv2_0+_Heart01Rep1 | CRG_CRG0002_MMaHEART_20180919 | 2020-09-01 | 2021-05-14 | Cshl | pacBioSII | Mouse | Heart | CapTrap | PrimeScript II | Mv2 | 0+ | Total | True | 1 | 1 | False | GENCODE | 30 | NA | 1,204,304 | 862 | 986 | 5,686 | 100% | 1,057,885 | 88% | 89% | 14,571 | 1.38% | 936 | 4,924 | 88% | 32% | 55% | 8,509,681 | 2,293,772 | 27% | 2,469,701 | 29% | 2,063,198 | 24% | 869,527 | 10% | 107,703 | 1% | 705,780 | 8% | 2,099 | 1,748 | 77% | 990 | 47% | 498 | 24% | 1,266 | 60% | 781 | 3,506 | 726 | 3,023 | 820 | 3,506 | 305 | 61% | 766 | 3,120 | 745 | 3,023 | 772 | 3,120 | 261 | 217 | 52% |
| ont-Crg-CapTrap_HpreCap_0+_HEK293T01Rep1 | CRG_CRG0009_HeK293T_20200504 | 2020-07-08 | 2020-12-13 | Crg | ONT | Human | HEK293T | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 5,382,437 | 783 | 958 | 9,684 | 98% | 1,870,580 | 35% | 93% | 19,423 | 1.04% | 776 | 4,111 | 40% | 59% | 67% | 8,603,719 | 316,045 | 4% | 3,227,352 | 38% | 3,594,116 | 42% | 848,049 | 10% | 133,707 | 2% | 484,450 | 6% | 568 | 107 | 38% | 329 | 58% | 136 | 24% | 422 | 74% | 594 | 3,385 | 538 | 2,096 | 618 | 3,385 | 104 | 76% | 652 | 3,029 | 708 | 1,374 | 618 | 3,029 | 75 | 14 | 55% |
| ont-Crg-CapTrap_HpreCap_0+_HEK293T01Rep2 | CRG_CRG0009_HeK293T_20200504 | 2020-07-08 | 2020-12-13 | Crg | ONT | Human | HEK293T | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 1 | 2 | False | GENCODE | 10 | NA | 6,527,975 | 776 | 949 | 16,196 | 99% | 2,275,620 | 35% | 93% | 22,003 | 0.97% | 776 | 4,441 | 34% | 59% | 66% | 9,593,803 | 378,323 | 4% | 3,484,560 | 36% | 4,026,450 | 42% | 948,443 | 10% | 150,355 | 2% | 605,672 | 6% | 698 | 108 | 43% | 369 | 53% | 182 | 26% | 504 | 72% | 579 | 2,834 | 478 | 2,255 | 622 | 2,834 | 136 | 75% | 642 | 2,834 | 653 | 1,807 | 641 | 2,834 | 92 | 14 | 51% |
| ont-Crg-CapTrap_HpreCap_0+_HEK293T01Rep3 | CRG_CRG0009_HeK293T_20200504 | 2020-09-01 | 2020-12-13 | Crg | ONT | Human | HEK293T | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 1 | 3 | False | GENCODE | 10 | NA | 6,865,221 | 828 | 1,022 | 13,203 | 99% | 3,528,167 | 52% | 94% | 29,792 | 0.84% | 890 | 5,417 | 35% | 68% | 69% | 13,628,862 | 532,887 | 4% | 5,189,956 | 38% | 5,471,943 | 40% | 1,286,291 | 9% | 190,991 | 1% | 956,794 | 7% | 827 | 122 | 42% | 440 | 53% | 207 | 25% | 622 | 75% | 608 | 3,039 | 508 | 2,222 | 650 | 3,039 | 159 | 77% | 650 | 3,039 | 666 | 1,684 | 646 | 3,039 | 111 | 16 | 54% |
| ont-Crg-CapTrap_HpreCap_0+_HEK293T01Rep4 | CRG_CRG0009_HeK293T_20200504 | 2020-10-19 | 2020-12-14 | Crg | ONT | Human | HEK293T | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 1 | 4 | False | GENCODE | 10 | NA | 2,245,691 | 1,230 | 1,334 | 12,984 | 99% | 716,540 | 32% | 93% | 10,775 | 1.50% | 852 | 4,134 | 52% | 50% | 70% | 5,877,531 | 141,609 | 2% | 2,384,161 | 41% | 2,550,845 | 43% | 488,294 | 8% | 99,170 | 2% | 213,452 | 4% | 216 | 97 | 40% | 128 | 59% | 74 | 34% | 158 | 73% | 649 | 1,816 | 600 | 1,816 | 661 | 1,612 | 56 | 76% | 656 | 1,816 | 658 | 1,816 | 654 | 1,601 | 39 | 18 | 53% |
| ont-Crg-CapTrap_HpreCap_0+_HEK293T01Rep5 | CRG_CRG0009_HeK293T_20200504 | 2020-12-21 | 2021-01-21 | Crg | ONT | Human | HEK293T | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 1 | 5 | False | GENCODE | 10 | NA | 11,138,647 | 1,351 | 1,448 | 14,590 | 99% | 6,055,545 | 55% | 94% | 43,947 | 0.73% | 985 | 5,868 | 28% | 68% | 69% | 19,490,801 | 1,004,852 | 5% | 6,592,860 | 34% | 7,596,978 | 39% | 1,964,120 | 10% | 318,132 | 2% | 2,013,859 | 10% | 1,357 | 123 | 41% | 664 | 49% | 307 | 23% | 1,070 | 79% | 683 | 3,073 | 631 | 3,073 | 714 | 3,038 | 244 | 79% | 708 | 3,038 | 754 | 2,180 | 682 | 3,038 | 154 | 14 | 50% |
| ont-Crg-CapTrap_HpreCap_0+_HEK293T02Rep1 | CRG_CRG0009_HeK293T_20200811 | 2020-11-30 | 2020-12-18 | Crg | ONT | Human | HEK293T | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 2 | 1 | False | GENCODE | 10 | NA | 10,925,623 | 1,173 | 1,266 | 11,148 | 99% | 5,435,385 | 50% | 94% | 40,351 | 0.74% | 907 | 6,160 | 27% | 62% | 69% | 16,767,613 | 702,982 | 4% | 5,828,617 | 35% | 6,727,111 | 40% | 1,598,997 | 10% | 255,058 | 2% | 1,654,848 | 10% | 1,151 | 107 | 39% | 538 | 47% | 245 | 21% | 838 | 73% | 612 | 3,042 | 516 | 2,167 | 667 | 3,042 | 178 | 73% | 668 | 3,042 | 679 | 1,817 | 667 | 3,042 | 113 | 10 | 46% |
| ont-Crg-CapTrap_HpreCap_0+_HEK293T02Rep2 | CRG_CRG0009_HeK293T_20200811 | 2020-11-30 | 2020-12-19 | Crg | ONT | Human | HEK293T | CapTrap | Marathon | HpreCap | 0+ | Total | True | 2 | 2 | False | GENCODE | 10 | NA | 16,394,077 | 1,229 | 1,333 | 24,541 | 99% | 9,233,532 | 57% | 93% | 64,700 | 0.70% | 973 | 6,878 | 18% | 69% | 67% | 26,410,890 | 1,682,989 | 6% | 7,973,518 | 30% | 10,041,566 | 38% | 2,598,570 | 10% | 344,485 | 1% | 3,769,762 | 14% | 2,613 | 161 | 38% | 968 | 37% | 409 | 16% | 2,047 | 78% | 673 | 5,770 | 622 | 5,770 | 705 | 3,487 | 320 | 78% | 713 | 3,041 | 712 | 2,528 | 713 | 3,041 | 227 | 14 | 56% |
| ont-Crg-CapTrap_HpreCap_0+_HEK293T02Rep3 | CRG_CRG0009_HeK293T_20200811 | 2021-02-08 | 2021-02-15 | Crg | ONT | Human | HEK293T | CapTrap | Maxima | HpreCap | 0+ | Total | True | 2 | 3 | False | GENCODE | 10 | NA | 8,614,387 | 1,137 | 1,214 | 10,967 | 98% | 4,558,649 | 54% | 94% | 36,708 | 0.81% | 842 | 5,124 | 37% | 28% | 65% | 15,387,667 | 594,826 | 4% | 6,117,532 | 40% | 5,460,608 | 35% | 1,394,678 | 9% | 231,681 | 2% | 1,588,342 | 10% | 1,061 | 125 | 38% | 453 | 43% | 228 | 21% | 771 | 73% | 588 | 3,638 | 490 | 2,364 | 641 | 3,638 | 166 | 73% | 648 | 2,190 | 640 | 2,190 | 652 | 1,558 | 110 | 13 | 48% |
| ont-Crg-CapTrap_HpreCap_0+_HEK293T02Rep4 | CRG_CRG0009_HeK293T_20200811 | 2021-02-08 | 2021-02-14 | Crg | ONT | Human | HEK293T | CapTrap | Marathon | HpreCap | 0+ | Total | True | 2 | 4 | False | GENCODE | 10 | NA | 10,259,740 | 1,183 | 1,255 | 11,882 | 100% | 5,097,494 | 50% | 94% | 40,320 | 0.79% | 876 | 5,733 | 32% | 68% | 66% | 17,715,092 | 915,658 | 5% | 5,541,901 | 31% | 7,343,462 | 41% | 1,710,889 | 10% | 266,795 | 2% | 1,936,387 | 11% | 1,508 | 148 | 38% | 638 | 42% | 272 | 18% | 1,163 | 77% | 658 | 3,352 | 641 | 2,980 | 670 | 3,352 | 198 | 73% | 671 | 2,069 | 694 | 2,052 | 670 | 2,069 | 150 | 15 | 55% |
| ont-Crg-CapTrap_HpreCap_0+_HEK293T02Rep5 | CRG_CRG0009_HeK293T_20200811 | 2021-03-01 | 2021-03-06 | Crg | ONT | Human | HEK293T | CapTrap | SuperScript II | HpreCap | 0+ | Total | True | 2 | 5 | False | GENCODE | 10 | NA | 8,873,279 | 1,026 | 1,180 | 37,519 | 99% | 4,137,176 | 47% | 97% | 32,505 | 0.79% | 902 | 6,306 | 24% | 69% | 71% | 13,858,676 | 610,703 | 4% | 5,161,420 | 37% | 5,098,350 | 37% | 1,403,655 | 10% | 209,701 | 2% | 1,374,847 | 10% | 886 | 101 | 40% | 513 | 58% | 206 | 23% | 639 | 72% | 620 | 3,041 | 554 | 2,343 | 647 | 3,041 | 151 | 73% | 647 | 3,041 | 650 | 2,186 | 646 | 3,041 | 112 | 13 | 54% |
| ont-Crg-CapTrap_HpreCap_0+_HEK293T02Rep6 | CRG_CRG0009_HeK293T_20200811 | 2021-03-01 | 2021-03-06 | Crg | ONT | Human | HEK293T | CapTrap | Marathon | HpreCap | 0+ | Total | True | 2 | 6 | False | GENCODE | 10 | NA | 12,392,274 | 750 | 921 | 12,842 | 99% | 5,252,176 | 43% | 88% | 41,605 | 0.79% | 779 | 4,860 | 22% | 66% | 61% | 17,235,033 | 1,015,428 | 6% | 5,057,470 | 29% | 7,235,564 | 42% | 1,682,311 | 10% | 229,769 | 1% | 2,014,491 | 12% | 2,464 | 200 | 38% | 679 | 28% | 330 | 13% | 1,879 | 76% | 491 | 3,562 | 417 | 2,961 | 585 | 3,562 | 247 | 75% | 624 | 3,165 | 610 | 3,165 | 630 | 3,106 | 149 | 12 | 45% |
| ont-Crg-CapTrap_HpreCap_0+_HEK293T02Rep7 | CRG_CRG0009_HeK293T_20200811 | 2021-03-08 | 2021-03-19 | Crg | ONT | Human | HEK293T | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 2 | 7 | False | GENCODE | 10 | NA | 15,662,716 | 794 | 988 | 16,717 | 99% | 7,059,474 | 46% | 93% | 47,892 | 0.68% | 838 | 6,233 | 23% | 69% | 67% | 19,044,003 | 1,163,178 | 6% | 6,128,249 | 32% | 6,885,173 | 36% | 1,971,212 | 10% | 285,743 | 2% | 2,610,448 | 14% | 2,147 | 139 | 37% | 956 | 45% | 477 | 22% | 1,566 | 73% | 567 | 5,418 | 484 | 5,418 | 614 | 3,452 | 346 | 73% | 646 | 3,452 | 615 | 2,249 | 659 | 3,452 | 217 | 14 | 45% |
| ont-Crg-CapTrap_HpreCap_0+_HEK293T02Rep8 | CRG_CRG0009_HeK293T_20200811 | 2021-05-31 | 2021-06-07 | Crg | ONT | Human | HEK293T | CapTrap | Marathon | HpreCap | 0+ | Total | True | 2 | 8 | False | GENCODE | 10 | NA | 11,456,461 | 797 | 981 | 19,774 | 99% | 5,793,068 | 51% | 88% | 46,913 | 0.81% | 806 | 5,070 | 22% | 71% | 58% | 20,240,149 | 1,091,331 | 5% | 5,951,974 | 29% | 8,851,904 | 44% | 1,807,414 | 9% | 253,250 | 1% | 2,284,276 | 11% | 2,707 | 238 | 38% | 696 | 26% | 343 | 13% | 2,063 | 76% | 508 | 3,531 | 448 | 3,531 | 590 | 3,041 | 248 | 72% | 617 | 3,531 | 647 | 3,531 | 602 | 3,041 | 163 | 14 | 48% |
| ont-Crg-CapTrap_HpreCap_1+_HEK293T01Rep1 | CRG_CRG0009_HeK293T_20200504 | 2021-01-04 | 2021-01-11 | Crg | ONT | Human | HEK293T | CapTrap | PrimeScript II | HpreCap | 1+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 8,695,672 | 1,417 | 1,488 | 17,172 | 95% | 3,634,034 | 44% | 93% | 47,872 | 1.32% | 1,472 | 7,214 | 29% | 71% | 68% | 28,463,176 | 1,547,891 | 5% | 8,611,171 | 30% | 11,112,901 | 39% | 2,681,296 | 9% | 253,982 | 1% | 4,255,935 | 15% | 1,646 | 198 | 39% | 709 | 43% | 253 | 15% | 1,306 | 79% | 790 | 4,995 | 410 | 3,890 | 1,124 | 4,995 | 203 | 80% | 891 | 3,242 | 874 | 2,679 | 934 | 3,242 | 137 | 16 | 54% |
| ont-Crg-CapTrap_HpreCap_1+_HEK293T02Rep1 | CRG_CRG0009_HeK293T_20200811 | 2021-03-08 | 2021-03-17 | Crg | ONT | Human | HEK293T | CapTrap | Marathon | HpreCap | 1+ | Total | True | 2 | 1 | False | GENCODE | 10 | NA | 11,204,637 | 1,399 | 1,584 | 14,515 | 99% | 4,960,431 | 45% | 91% | 61,659 | 1.24% | 1,324 | 8,154 | 21% | 71% | 64% | 35,003,984 | 2,301,606 | 7% | 9,186,478 | 26% | 13,902,210 | 40% | 3,194,898 | 9% | 332,800 | 1% | 6,085,992 | 17% | 2,406 | 217 | 38% | 737 | 31% | 275 | 11% | 2,050 | 85% | 1,093 | 4,485 | 1,113 | 4,485 | 1,052 | 4,008 | 231 | 84% | 1,008 | 4,485 | 1,014 | 4,485 | 1,008 | 3,466 | 150 | 14 | 55% |
| ont-Crg-CapTrap_Hv3_0+_HEK293T02Rep10 | CRG_CRG0009_HeK293T_20200811 | 2022-01-17 | 2022-02-14 | Crg | ONT | Human | HEK293T | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 2 | 10 | False | GENCODE | 10 | NA | 11,836,773 | 866 | 916 | 65,659 | 90% | 6,189,701 | 58% | 91% | 40,040 | 0.65% | 700 | 5,290 | 31% | 63% | 59% | 16,435,916 | 929,429 | 6% | 5,985,241 | 36% | 5,703,342 | 35% | 1,665,077 | 10% | 186,544 | 1% | 1,966,283 | 12% | 2,343 | 219 | 36% | 946 | 40% | 403 | 17% | 1,646 | 70% | 448 | 2,808 | 355 | 2,208 | 539 | 2,808 | 280 | 69% | 542 | 2,208 | 511 | 2,208 | 564 | 2,044 | 192 | 18 | 48% |
| ont-Crg-CapTrap_Hv3_0+_HEK293T02Rep4 | CRG_CRG0009_HeK293T_20200811 | 2021-10-19 | 2021-10-31 | Crg | ONT | Human | HEK293T | CapTrap | PrimeScript II | Hv3 | 0+ | Total | True | 2 | 4 | False | GENCODE | 10 | NA | 7,610,050 | 1,053 | 1,216 | 12,814 | 97% | 3,935,658 | 53% | 89% | 40,281 | 1.02% | 842 | 5,079 | 73% | 35% | 54% | 13,145,157 | 2,308,784 | 18% | 3,139,694 | 24% | 3,578,150 | 27% | 1,885,992 | 14% | 472,319 | 4% | 1,760,218 | 13% | 2,170 | 293 | 56% | 1,254 | 58% | 348 | 16% | 1,372 | 63% | 728 | 3,453 | 624 | 3,021 | 762 | 3,453 | 237 | 68% | 748 | 3,453 | 719 | 3,021 | 766 | 3,453 | 220 | 30 | 63% |
| ont-Crg-CapTrap_Hv3_0+_HEK293T02Rep9 | CRG_CRG0009_HeK293T_20200811 | 2022-01-17 | 2022-02-14 | Crg | ONT | Human | HEK293T | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 2 | 9 | False | GENCODE | 10 | NA | 11,713,999 | 870 | 922 | 65,652 | 91% | 6,191,626 | 58% | 91% | 40,046 | 0.65% | 701 | 5,290 | 30% | 63% | 59% | 16,415,177 | 935,321 | 6% | 5,983,495 | 36% | 5,688,636 | 35% | 1,658,956 | 10% | 183,714 | 1% | 1,965,055 | 12% | 2,344 | 220 | 35% | 948 | 40% | 404 | 17% | 1,641 | 70% | 449 | 2,808 | 357 | 2,208 | 533 | 2,808 | 280 | 69% | 544 | 2,208 | 516 | 2,208 | 564 | 2,044 | 193 | 18 | 48% |
| ont-Crg-CapTrapR2C2_HpreCap_0+_HEK293T02Rep10 | CRG_CRG0009_HeK293T_20200811 | 2022-01-17 | 2022-02-14 | Crg | ONT | Human | HEK293T | CapTrapR2C2 | PrimeScript II | HpreCap | 0+ | Total | True | 2 | 10 | False | GENCODE | 10 | NA | 11,836,773 | 866 | 916 | 65,659 | 90% | 6,189,701 | 58% | 91% | 40,040 | 0.65% | 700 | 5,290 | 31% | 63% | 59% | 16,435,916 | 929,429 | 6% | 5,985,241 | 36% | 5,703,342 | 35% | 1,665,077 | 10% | 186,544 | 1% | 1,966,283 | 12% | 2,343 | 219 | 36% | 946 | 40% | 403 | 17% | 1,646 | 70% | 448 | 2,808 | 355 | 2,208 | 539 | 2,808 | 280 | 69% | 542 | 2,208 | 511 | 2,208 | 564 | 2,044 | 192 | 18 | 48% |
| ont-Crg-CapTrapR2C2_HpreCap_0+_HEK293T02Rep11 | CRG_CRG0009_HeK293T_20200811 | 2022-01-17 | 2022-04-04 | Crg | ONT | Human | HEK293T | CapTrapR2C2 | PrimeScript II | HpreCap | 0+ | Total | True | 2 | 11 | False | GENCODE | 10 | NA | 10,562,545 | 855 | 904 | 77,334 | 89% | 5,031,669 | 53% | 92% | 36,403 | 0.72% | 686 | 4,738 | 26% | 60% | 59% | 13,864,308 | 763,550 | 6% | 5,095,019 | 37% | 4,888,194 | 35% | 1,421,478 | 10% | 173,508 | 1% | 1,522,559 | 11% | 1,875 | 199 | 35% | 890 | 47% | 346 | 18% | 1,293 | 69% | 457 | 2,483 | 364 | 2,208 | 525 | 2,483 | 237 | 68% | 540 | 2,208 | 517 | 2,208 | 560 | 1,481 | 169 | 18 | 49% |
| ont-Crg-CapTrapR2C2_HpreCap_0+_HEK293T02Rep9 | CRG_CRG0009_HeK293T_20200811 | 2022-01-17 | 2022-02-14 | Crg | ONT | Human | HEK293T | CapTrapR2C2 | PrimeScript II | HpreCap | 0+ | Total | True | 2 | 9 | False | GENCODE | 10 | NA | 11,713,999 | 870 | 922 | 65,652 | 91% | 6,191,626 | 58% | 91% | 40,046 | 0.65% | 701 | 5,290 | 30% | 63% | 59% | 16,415,177 | 935,321 | 6% | 5,983,495 | 36% | 5,688,636 | 35% | 1,658,956 | 10% | 183,714 | 1% | 1,965,055 | 12% | 2,344 | 220 | 35% | 948 | 40% | 404 | 17% | 1,641 | 70% | 449 | 2,808 | 357 | 2,208 | 533 | 2,808 | 280 | 69% | 544 | 2,208 | 516 | 2,208 | 564 | 2,044 | 193 | 18 | 48% |
| ont-Crg-Rt_HpreCap_0+_HEK293T02Rep1 | CRG_CRG0009_HeK293T_20200811 | 2020-12-14 | 2020-12-30 | Crg | ONT | Human | HEK293T | Rt | PrimeScript II | HpreCap | 0+ | Total | False | 2 | 1 | False | GENCODE | 10 | NA | 8,853,043 | 954 | 1,123 | 11,903 | 95% | 4,119,110 | 49% | 83% | 39,057 | 0.95% | 811 | 4,840 | NA | 0% | 57% | 16,285,393 | 551,496 | 3% | 5,377,493 | 33% | 7,993,606 | 49% | 1,213,410 | 7% | 190,269 | 1% | 959,119 | 6% | 1,345 | 160 | 39% | 376 | 28% | 157 | 12% | 977 | 73% | 469 | 3,044 | 359 | 2,531 | 627 | 3,044 | 124 | 79% | 660 | 3,044 | 662 | 1,831 | 654 | 3,044 | 82 | 10 | 52% |
| ont-Crg-Rt_HpreCap_0+_HEK293T02Rep2 | CRG_CRG0009_HeK293T_20200811 | 2020-12-14 | 2020-12-31 | Crg | ONT | Human | HEK293T | Rt | Marathon | HpreCap | 0+ | Total | False | 2 | 2 | False | GENCODE | 10 | NA | 12,307,735 | 1,054 | 1,250 | 11,673 | 99% | 6,068,732 | 50% | 85% | 66,886 | 1.10% | 1,053 | 14,890 | NA | 0% | 51% | 37,046,527 | 2,618,598 | 7% | 10,538,971 | 28% | 14,594,098 | 39% | 3,410,670 | 9% | 377,849 | 1% | 5,506,341 | 15% | 4,645 | 382 | 38% | 929 | 20% | 363 | 8% | 3,888 | 84% | 684 | 4,512 | 658 | 4,512 | 733 | 3,634 | 276 | 76% | 752 | 3,468 | 757 | 2,635 | 752 | 3,468 | 175 | 14 | 48% |
| ont-Crg-Rt_HpreCap_0+_HEK293T02Rep3 | CRG_CRG0009_HeK293T_20200608 | 2020-12-21 | 2020-12-30 | Crg | ONT | Human | HEK293T | Rt | SuperScript II | HpreCap | 0+ | Total | False | 2 | 3 | False | GENCODE | 10 | NA | 7,671,462 | 932 | 1,065 | 20,306 | 94% | 3,591,675 | 50% | 85% | 35,331 | 0.98% | 770 | 5,151 | NA | 0% | 53% | 16,264,665 | 605,008 | 4% | 5,368,143 | 33% | 7,948,850 | 49% | 1,255,374 | 8% | 177,472 | 1% | 909,818 | 6% | 1,482 | 206 | 40% | 438 | 30% | 190 | 13% | 1,118 | 75% | 520 | 2,531 | 459 | 2,531 | 609 | 2,486 | 147 | 77% | 643 | 1,979 | 660 | 1,979 | 638 | 1,461 | 99 | 14 | 52% |
| ont-Crg-Rt_HpreCap_0+_HEK293T02Rep4 | CRG_CRG0009_HeK293T_20200811 | 2021-02-01 | 2021-02-07 | Crg | ONT | Human | HEK293T | Rt | PrimeScript II | HpreCap | 0+ | Total | False | 2 | 4 | False | GENCODE | 10 | NA | 8,857,569 | 694 | 842 | 13,084 | 92% | 3,645,813 | 45% | 77% | 35,106 | 0.96% | 719 | 4,466 | NA | 0% | 49% | 15,284,312 | 498,972 | 3% | 4,839,707 | 32% | 7,795,025 | 51% | 1,073,402 | 7% | 161,537 | 1% | 915,669 | 6% | 1,667 | 204 | 39% | 356 | 21% | 142 | 9% | 1,200 | 72% | 407 | 2,533 | 331 | 2,533 | 568 | 2,479 | 111 | 78% | 627 | 1,460 | 632 | 1,450 | 623 | 1,460 | 69 | 8 | 49% |
| ont-Crg-Rt_HpreCap_0+_HEK293T02Rep5 | CRG_CRG0009_HeK293T_20200811 | 2021-02-01 | 2021-02-07 | Crg | ONT | Human | HEK293T | Rt | Maxima | HpreCap | 0+ | Total | False | 2 | 5 | False | GENCODE | 10 | NA | 7,555,652 | 644 | 754 | 11,064 | 92% | 3,186,303 | 46% | 70% | 36,406 | 1.14% | 618 | 5,128 | NA | 0% | 39% | 16,094,731 | 497,242 | 3% | 5,575,263 | 35% | 7,982,915 | 50% | 943,092 | 6% | 190,718 | 1% | 905,501 | 6% | 2,144 | 310 | 36% | 288 | 13% | 98 | 5% | 1,583 | 74% | 379 | 1,853 | 357 | 1,853 | 481 | 1,628 | 65 | 66% | 575 | 1,410 | 558 | 1,410 | 592 | 1,157 | 43 | 6 | 44% |
| ont-Crg-CapTrap_HpreCap_0+_iPSC01Rep1 | Cambridge_HSiPSC_20190130 | 2020-06-03 | 2020-12-12 | Crg | ONT | Human | iPSC | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 10,651,251 | 746 | 917 | 13,771 | 99% | 5,462,351 | 52% | 95% | 36,651 | 0.67% | 783 | 4,970 | 25% | 63% | 67% | 14,458,549 | 737,975 | 5% | 5,400,136 | 37% | 5,504,447 | 38% | 1,438,000 | 10% | 214,427 | 1% | 1,163,564 | 8% | 1,378 | 131 | 42% | 850 | 62% | 311 | 23% | 1,058 | 77% | 587 | 3,129 | 459 | 2,526 | 623 | 3,129 | 248 | 80% | 612 | 2,526 | 619 | 2,526 | 609 | 2,068 | 194 | 18 | 62% |
| ont-Crg-CapTrap_Hv3_0+_iPSC01Rep1 | Cambridge_HSiPSC_20190130 | 2020-10-13 | 2020-12-15 | Crg | ONT | Human | iPSC | CapTrap | PrimeScript II | Hv3 | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 11,737,183 | 887 | 1,082 | 12,136 | 98% | 6,234,135 | 54% | 90% | 54,986 | 0.88% | 779 | 5,346 | 64% | 37% | 53% | 15,752,529 | 3,596,584 | 23% | 3,343,186 | 21% | 3,522,577 | 22% | 2,390,114 | 15% | 572,915 | 4% | 2,327,153 | 15% | 3,786 | 328 | 55% | 2,529 | 67% | 582 | 15% | 2,558 | 68% | 666 | 3,468 | 616 | 3,468 | 678 | 3,282 | 422 | 73% | 698 | 3,282 | 737 | 2,545 | 692 | 3,282 | 399 | 35 | 69% |
| pacBioSII-Cshl-CapTrap_HpreCap_0+_iPSC01Rep1 | Cambridge_HSiPSC_20190130 | 2020-09-01 | 2021-06-10 | Cshl | pacBioSII | Human | iPSC | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 1 | 1 | False | GENCODE | 30 | NA | 4,045,445 | 842 | 1,015 | 8,211 | 99% | 3,751,958 | 94% | 95% | 32,578 | 0.87% | 1,136 | 6,422 | 80% | 81% | 70% | 21,221,308 | 745,676 | 4% | 8,836,846 | 42% | 8,185,016 | 39% | 1,778,398 | 8% | 124,786 | 1% | 1,550,586 | 7% | 1,078 | 269 | 45% | 456 | 42% | 267 | 25% | 864 | 80% | 649 | 3,561 | 465 | 3,561 | 722 | 3,123 | 218 | 82% | 714 | 2,634 | 753 | 2,634 | 694 | 2,150 | 136 | 34 | 51% |
| pacBioSII-Cshl-CapTrap_Hv3_0+_iPSC01Rep1 | Cambridge_HSiPSC_20190130 | 2020-09-01 | 2021-05-14 | Cshl | pacBioSII | Human | iPSC | CapTrap | PrimeScript II | Hv3 | 0+ | Total | True | 1 | 1 | False | GENCODE | 30 | NA | 609,397 | 931 | 1,080 | 5,554 | 99% | 557,235 | 92% | 92% | 9,794 | 1.76% | 1,010 | 5,340 | 100% | 13% | 64% | 6,225,040 | 713,355 | 11% | 2,180,461 | 35% | 1,851,920 | 30% | 859,377 | 14% | 200,477 | 3% | 419,450 | 7% | 577 | 953 | 64% | 313 | 54% | 169 | 29% | 362 | 63% | 793 | 3,126 | 776 | 3,126 | 797 | 2,952 | 106 | 63% | 765 | 2,952 | 826 | 2,525 | 718 | 2,952 | 97 | 160 | 57% |
| ont-Crg-CapTrap_HpreCap_0+_Liver01Rep1 | Ambion_AM7960_HSaLIVER_1817952 | 2020-05-28 | 2020-12-12 | Crg | ONT | Human | Liver | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 14,179,293 | 901 | 1,120 | 12,637 | 99% | 8,898,498 | 63% | 97% | 30,978 | 0.35% | 901 | 4,627 | 13% | 69% | 73% | 12,342,513 | 436,374 | 4% | 5,330,182 | 43% | 4,635,539 | 38% | 986,303 | 8% | 149,397 | 1% | 804,718 | 7% | 643 | 46 | 39% | 489 | 76% | 168 | 26% | 508 | 79% | 619 | 2,544 | 546 | 2,395 | 629 | 2,544 | 145 | 86% | 651 | 2,544 | 701 | 2,395 | 629 | 2,544 | 120 | 9 | 71% |
| ont-Crg-CapTrap_Hv3_0+_Liver01Rep1 | Ambion_AM7960_HSaLIVER_1817952 | 2020-09-28 | 2020-12-15 | Crg | ONT | Human | Liver | CapTrap | PrimeScript II | Hv3 | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 12,640,902 | 1,030 | 1,190 | 12,791 | 99% | 6,947,319 | 56% | 95% | 51,486 | 0.74% | 868 | 5,339 | 46% | 54% | 61% | 14,763,635 | 2,435,496 | 16% | 4,259,740 | 29% | 3,748,181 | 25% | 2,023,588 | 14% | 536,592 | 4% | 1,760,038 | 12% | 2,515 | 201 | 55% | 1,710 | 68% | 503 | 20% | 1,634 | 65% | 669 | 3,190 | 583 | 2,942 | 693 | 3,190 | 340 | 68% | 687 | 2,728 | 621 | 2,315 | 706 | 2,728 | 325 | 26 | 65% |
| ont-Crg-CapTrap_MpreCap_0+_Liver01Rep1 | CRG_CRG0003_MMaLIVER_20180919 | 2020-05-05 | 2020-12-10 | Crg | ONT | Mouse | Liver | CapTrap | PrimeScript II | MpreCap | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 10,100,816 | 1,020 | 1,104 | 11,957 | 99% | 5,333,608 | 53% | 96% | 25,705 | 0.48% | 899 | 4,782 | 26% | 60% | 66% | 10,411,016 | 709,193 | 7% | 4,561,016 | 44% | 3,709,868 | 36% | 515,269 | 5% | 119,284 | 1% | 796,386 | 8% | 1,047 | 105 | 55% | 623 | 60% | 272 | 26% | 733 | 70% | 555 | 3,592 | 440 | 3,341 | 594 | 3,592 | 196 | 72% | 652 | 3,592 | 633 | 1,970 | 659 | 3,592 | 170 | 17 | 62% |
| ont-Crg-CapTrap_Mv2_0+_Liver01Rep1 | CRG_MMaLIVER1_20200824 | 2020-08-24 | 2020-12-13 | Crg | ONT | Mouse | Liver | CapTrap | PrimeScript II | Mv2 | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 9,704,478 | 1,116 | 1,214 | 9,524 | 99% | 4,482,025 | 47% | 91% | 40,585 | 0.91% | 813 | 4,188 | 64% | 41% | 52% | 12,150,336 | 3,786,956 | 31% | 2,988,033 | 25% | 2,463,378 | 20% | 1,190,381 | 10% | 299,657 | 2% | 1,421,931 | 12% | 3,804 | 395 | 68% | 2,295 | 60% | 735 | 19% | 2,422 | 64% | 712 | 3,631 | 626 | 3,631 | 732 | 3,111 | 472 | 64% | 738 | 3,075 | 688 | 3,075 | 744 | 2,615 | 431 | 45 | 59% |
| pacBioSII-Cshl-CapTrap_HpreCap_0+_Liver01Rep1 | Ambion_AM7960_HSaLIVER_1817952 | 2020-09-01 | 2021-06-12 | Cshl | pacBioSII | Human | Liver | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 1 | 1 | False | GENCODE | 30 | NA | 2,586,438 | 852 | 1,016 | 6,103 | 99% | 2,479,667 | 96% | 98% | 13,073 | 0.53% | 1,132 | 5,395 | 80% | 85% | 81% | 9,795,136 | 172,569 | 2% | 5,069,586 | 52% | 3,742,892 | 38% | 479,581 | 5% | 47,385 | 0% | 283,123 | 3% | 175 | 68 | 48% | 112 | 64% | 73 | 42% | 139 | 79% | 626 | 2,949 | 573 | 2,949 | 632 | 2,314 | 62 | 85% | 656 | 2,314 | 685 | 1,980 | 640 | 2,314 | 50 | 19 | 68% |
| pacBioSII-Cshl-CapTrap_Hv3_0+_Liver01Rep1 | Ambion_AM7960_HSaLIVER_1817952 | 2020-09-01 | 2021-06-10 | Cshl | pacBioSII | Human | Liver | CapTrap | PrimeScript II | Hv3 | 0+ | Total | True | 1 | 1 | False | GENCODE | 30 | NA | 3,127,329 | 954 | 1,053 | 5,556 | 100% | 2,770,483 | 89% | 95% | 24,492 | 0.88% | 1,050 | 5,339 | 94% | 71% | 64% | 12,799,319 | 1,554,981 | 12% | 4,629,841 | 36% | 3,624,916 | 28% | 1,531,565 | 12% | 325,448 | 3% | 1,132,568 | 9% | 1,185 | 380 | 60% | 768 | 65% | 286 | 24% | 806 | 68% | 797 | 3,176 | 718 | 2,846 | 820 | 3,176 | 207 | 72% | 833 | 2,955 | 816 | 2,485 | 846 | 2,955 | 187 | 60 | 65% |
| pacBioSII-Cshl-CapTrap_MpreCap_0+_Liver01Rep1 | CRG_CRG0003_MMaLIVER_20180919 | 2020-09-01 | 2021-06-10 | Cshl | pacBioSII | Mouse | Liver | CapTrap | PrimeScript II | MpreCap | 0+ | Total | True | 1 | 1 | False | GENCODE | 30 | NA | 4,892,397 | 974 | 1,115 | 5,628 | 99% | 4,660,872 | 96% | 97% | 19,580 | 0.42% | 1,226 | 4,959 | 83% | 71% | 72% | 13,078,121 | 715,416 | 5% | 6,128,127 | 47% | 4,641,446 | 35% | 557,469 | 4% | 62,407 | 0% | 973,256 | 7% | 730 | 150 | 61% | 349 | 48% | 229 | 31% | 549 | 75% | 674 | 2,797 | 504 | 2,714 | 748 | 2,797 | 162 | 71% | 769 | 2,565 | 712 | 2,477 | 774 | 2,565 | 136 | 28 | 59% |
| pacBioSII-Cshl-CapTrap_Mv2_0+_Liver01Rep1 | CRG_CRG0003_MMaLIVER_20180919 | 2020-09-01 | 2021-05-14 | Cshl | pacBioSII | Mouse | Liver | CapTrap | PrimeScript II | Mv2 | 0+ | Total | True | 1 | 1 | False | GENCODE | 30 | NA | 946,411 | 968 | 1,051 | 5,755 | 100% | 846,882 | 90% | 93% | 12,360 | 1.46% | 1,002 | 4,897 | 95% | 29% | 61% | 7,070,229 | 1,607,975 | 23% | 2,435,044 | 34% | 1,688,415 | 24% | 673,390 | 10% | 99,303 | 1% | 566,102 | 8% | 1,267 | 1,341 | 75% | 778 | 61% | 355 | 28% | 854 | 67% | 844 | 4,462 | 791 | 3,188 | 860 | 4,462 | 233 | 66% | 852 | 3,074 | 850 | 3,074 | 856 | 2,814 | 227 | 240 | 64% |
| ont-Crg-CapTrap_HpreCap_0+_Mix01Rep1 | ali-mortazavi-h1_es_1,ali-mortazavi-h1_de_1 | 2021-01-14 | 2021-03-03 | Crg | ONT | Human | Mix | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 1 | 1 | False | LRGASP | 10 | NA | 19,239,132 | 769 | 982 | 56,243 | 97% | 10,732,162 | 58% | 91% | 68,632 | 0.64% | 909 | 6,694 | 11% | 71% | 57% | 28,893,702 | 1,956,946 | 7% | 9,585,143 | 33% | 10,912,283 | 38% | 2,537,285 | 9% | 353,722 | 1% | 3,548,323 | 12% | 3,266 | 175 | 40% | 1,703 | 52% | 410 | 13% | 2,624 | 80% | 620 | 4,300 | 428 | 3,711 | 698 | 4,300 | 336 | 82% | 678 | 4,300 | 616 | 1,976 | 700 | 4,300 | 278 | 15 | 68% |
| ont-Crg-CapTrap_HpreCap_0+_Mix02Rep1 | ali-mortazavi-h1_es_2,ali-mortazavi-h1_de_2 | 2021-01-11 | 2021-03-02 | Crg | ONT | Human | Mix | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 2 | 1 | False | LRGASP | 10 | NA | 14,689,856 | 819 | 1,044 | 13,737 | 98% | 8,634,828 | 60% | 92% | 61,693 | 0.71% | 965 | 5,757 | 13% | 69% | 59% | 28,148,906 | 1,805,694 | 6% | 9,460,087 | 34% | 10,761,666 | 38% | 2,428,790 | 9% | 339,900 | 1% | 3,352,769 | 12% | 2,632 | 184 | 41% | 1,386 | 53% | 375 | 14% | 2,150 | 82% | 664 | 5,483 | 481 | 5,483 | 741 | 4,991 | 303 | 81% | 721 | 3,822 | 697 | 3,317 | 729 | 3,822 | 254 | 18 | 68% |
| ont-Crg-CapTrap_HpreCap_0+_Mix03Rep1 | ali-mortazavi-h1_es_3,ali-mortazavi-h1_de_3 | 2021-01-11 | 2021-03-03 | Crg | ONT | Human | Mix | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 3 | 1 | False | LRGASP | 10 | NA | 15,954,481 | 806 | 1,024 | 73,416 | 97% | 9,414,183 | 61% | 95% | 67,599 | 0.72% | 961 | 6,866 | 11% | 69% | 60% | 29,216,586 | 2,266,954 | 8% | 9,800,733 | 34% | 10,005,861 | 34% | 2,703,955 | 9% | 324,553 | 1% | 4,114,530 | 14% | 2,847 | 184 | 44% | 1,822 | 64% | 409 | 14% | 2,405 | 84% | 689 | 6,080 | 488 | 3,711 | 739 | 6,080 | 346 | 85% | 739 | 4,311 | 658 | 2,671 | 752 | 4,311 | 301 | 19 | 74% |
| ont-Ucsc-dRNA_HpreCap_0+_Mix01Rep1 | ali-mortazavi-h1_es_1,ali-mortazavi-h1_de_1 | 2021-01-14 | 2021-05-05 | Ucsc | ONT | Human | Mix | directRNA | None | HpreCap | 0+ | Total | True | 1 | 1 | False | LRGASP | 10 | NA | 2,200,320 | 978 | 1,319 | 58,716 | 98% | 1,169,877 | 54% | 97% | 16,926 | 1.45% | 1,626 | 10,098 | 22% | 71% | 64% | 20,120,417 | 344,497 | 2% | 9,812,769 | 49% | 8,867,459 | 44% | 604,588 | 3% | 59,902 | 0% | 431,202 | 2% | 210 | 97 | 47% | 188 | 90% | 28 | 13% | 166 | 79% | 899 | 6,859 | 1,521 | 6,859 | 890 | 6,260 | 21 | 75% | 906 | 2,994 | 381 | 1,172 | 914 | 2,994 | 23 | 11 | 82% |
| ont-Ucsc-dRNA_HpreCap_0+_Mix02Rep1 | ali-mortazavi-h1_es_2,ali-mortazavi-h1_de_2 | 2021-01-11 | 2021-05-05 | Ucsc | ONT | Human | Mix | directRNA | None | HpreCap | 0+ | Total | True | 2 | 1 | False | LRGASP | 10 | NA | 1,336,667 | 986 | 1,314 | 25,211 | 99% | 674,156 | 51% | 96% | 11,772 | 1.75% | 1,553 | 10,027 | 31% | 71% | 65% | 14,556,608 | 215,541 | 1% | 7,362,107 | 51% | 6,354,772 | 44% | 369,753 | 3% | 36,195 | 0% | 218,240 | 1% | 133 | 101 | 50% | 119 | 89% | 21 | 16% | 111 | 83% | 996 | 5,360 | 1,453 | 5,360 | 969 | 4,688 | 17 | 81% | 1,065 | 3,096 | 622 | 1,172 | 1,132 | 3,096 | 15 | 11 | 71% |
| ont-Ucsc-dRNA_HpreCap_0+_Mix03Rep1 | ali-mortazavi-h1_es_3,ali-mortazavi-h1_de_3 | 2021-01-11 | 2021-05-08 | Ucsc | ONT | Human | Mix | directRNA | None | HpreCap | 0+ | Total | True | 3 | 1 | False | LRGASP | 10 | NA | 432,616 | 935 | 1,276 | 18,465 | 98% | 204,467 | 48% | 97% | 4,974 | 2.43% | 1,346 | 8,406 | 49% | 63% | 54% | 6,291,634 | 67,350 | 1% | 3,290,908 | 52% | 2,739,426 | 44% | 130,915 | 2% | 9,346 | 0% | 53,689 | 1% | 61 | 144 | 43% | 53 | 87% | 9 | 15% | 50 | 82% | 916 | 5,360 | 1,255 | 5,360 | 902 | 3,966 | 7 | 78% | 1,502 | 3,094 | 314 | 318 | 1,784 | 3,094 | 7 | 17 | 78% |
| ont-Ucsc-PcrOnt_HpreCap_1+_Mix01Rep1 | ali-mortazavi-h1_es_1,ali-mortazavi-h1_de_1 | 2021-01-14 | 2021-05-05 | Ucsc | ONT | Human | Mix | PcrOnt | Maxima | HpreCap | 1+ | Total | True | 1 | 1 | False | LRGASP | 10 | NA | 20,418,801 | 760 | 921 | 105,505 | 82% | 9,386,083 | 56% | 88% | 78,908 | 0.84% | 914 | 10,916 | 7% | 71% | 62% | 34,166,624 | 2,377,086 | 7% | 12,100,660 | 35% | 13,074,424 | 38% | 2,554,929 | 7% | 314,133 | 1% | 3,745,392 | 11% | 5,427 | 324 | 37% | 2,569 | 47% | 415 | 8% | 4,334 | 80% | 497 | 5,819 | 317 | 5,819 | 643 | 5,573 | 338 | 81% | 683 | 5,573 | 488 | 2,332 | 743 | 5,573 | 271 | 16 | 65% |
| ont-Ucsc-PcrOnt_HpreCap_1+_Mix02Rep1 | ali-mortazavi-h1_es_2,ali-mortazavi-h1_de_2 | 2021-01-11 | 2021-05-06 | Ucsc | ONT | Human | Mix | PcrOnt | Maxima | HpreCap | 1+ | Total | True | 2 | 1 | False | LRGASP | 10 | NA | 14,645,499 | 768 | 940 | 350,382 | 84% | 6,204,891 | 50% | 88% | 57,438 | 0.93% | 908 | 10,925 | 9% | 72% | 62% | 27,388,614 | 1,648,226 | 6% | 10,309,163 | 38% | 10,788,735 | 39% | 1,976,735 | 7% | 259,219 | 1% | 2,406,536 | 9% | 3,378 | 274 | 39% | 1,778 | 53% | 339 | 10% | 2,716 | 80% | 525 | 5,335 | 312 | 5,335 | 657 | 5,318 | 289 | 85% | 663 | 3,695 | 460 | 2,438 | 698 | 3,695 | 245 | 20 | 72% |
| ont-Ucsc-PcrOnt_HpreCap_1+_Mix03Rep1 | ali-mortazavi-h1_es_3,ali-mortazavi-h1_de_3 | 2021-01-11 | 2021-05-05 | Ucsc | ONT | Human | Mix | PcrOnt | Maxima | HpreCap | 1+ | Total | True | 3 | 1 | False | LRGASP | 10 | NA | 17,863,295 | 742 | 890 | 106,378 | 79% | 7,636,417 | 54% | 88% | 67,409 | 0.88% | 919 | 10,916 | 9% | 71% | 61% | 30,961,711 | 2,052,313 | 7% | 11,164,966 | 36% | 12,077,642 | 39% | 2,299,015 | 7% | 266,184 | 1% | 3,101,591 | 10% | 4,315 | 307 | 39% | 2,085 | 48% | 373 | 9% | 3,456 | 80% | 509 | 7,527 | 312 | 5,745 | 661 | 7,527 | 308 | 83% | 670 | 4,212 | 483 | 2,533 | 711 | 4,212 | 245 | 17 | 66% |
| ont-Ucsc-R2C2_HpreCap_0+_Mix01Rep1 | ali-mortazavi-h1_es_1,ali-mortazavi-h1_de_1 | 2021-01-14 | 2021-06-01 | Ucsc | ONT | Human | Mix | R2C2 | SMART MMLV | HpreCap | 0+ | Total | True | 1 | 1 | False | LRGASP | 10 | NA | 1,002,303 | 1,474 | 1,646 | 14,549 | 100% | 918,327 | 92% | 95% | 19,642 | 2.14% | 1,754 | 8,873 | 54% | 69% | 85% | 20,970,679 | 444,041 | 2% | 10,456,853 | 50% | 7,832,281 | 37% | 1,029,277 | 5% | 84,494 | 0% | 1,123,733 | 5% | 363 | 363 | 44% | 157 | 43% | 77 | 21% | 316 | 87% | 1,022 | 4,571 | 928 | 4,571 | 1,074 | 4,553 | 62 | 81% | 989 | 4,050 | 1,081 | 4,050 | 816 | 3,826 | 35 | 35 | 45% |
| ont-Ucsc-R2C2_HpreCap_0+_Mix02Rep1 | ali-mortazavi-h1_es_2,ali-mortazavi-h1_de_2 | 2021-01-11 | 2021-06-01 | Ucsc | ONT | Human | Mix | R2C2 | SMART MMLV | HpreCap | 0+ | Total | True | 2 | 1 | False | LRGASP | 10 | NA | 987,755 | 1,468 | 1,641 | 17,414 | 100% | 905,875 | 92% | 95% | 19,709 | 2.18% | 1,743 | 8,568 | 55% | 69% | 84% | 21,196,790 | 484,428 | 2% | 10,632,102 | 50% | 7,890,825 | 37% | 1,007,191 | 5% | 79,656 | 0% | 1,102,588 | 5% | 371 | 376 | 46% | 168 | 45% | 87 | 23% | 326 | 88% | 1,016 | 6,645 | 883 | 5,479 | 1,052 | 6,645 | 75 | 86% | 916 | 6,645 | 916 | 2,667 | 902 | 6,645 | 41 | 42 | 47% |
| ont-Ucsc-R2C2_HpreCap_0+_Mix03Rep1 | ali-mortazavi-h1_es_3,ali-mortazavi-h1_de_3 | 2021-01-11 | 2021-06-01 | Ucsc | ONT | Human | Mix | R2C2 | SMART MMLV | HpreCap | 0+ | Total | True | 3 | 1 | False | LRGASP | 10 | NA | 1,268,610 | 1,480 | 1,654 | 13,115 | 100% | 1,168,889 | 92% | 95% | 23,768 | 2.03% | 1,760 | 8,638 | 55% | 71% | 83% | 24,375,394 | 596,562 | 2% | 11,640,489 | 48% | 8,973,339 | 37% | 1,331,533 | 5% | 107,098 | 0% | 1,726,373 | 7% | 497 | 392 | 44% | 207 | 42% | 103 | 21% | 446 | 90% | 954 | 4,873 | 810 | 4,873 | 1,015 | 3,832 | 89 | 86% | 971 | 3,108 | 1,093 | 2,996 | 856 | 3,108 | 49 | 39 | 48% |
| pacBioSII-Uci-CapTrap_HpreCap_0+_Mix01Rep1 | ali-mortazavi-h1_es_1,ali-mortazavi-h1_de_1 | 2021-05-01 | 2021-05-30 | Uci | pacBioSII | Human | Mix | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 1 | 1 | False | LRGASP | 30 | NA | 1,821,660 | 1,112 | 1,234 | 8,604 | 98% | 1,658,506 | 93% | 91% | 24,016 | 1.45% | 1,363 | 6,164 | 78% | 87% | 64% | 19,338,407 | 583,037 | 3% | 8,205,692 | 42% | 8,179,708 | 42% | 1,126,936 | 6% | 102,927 | 1% | 1,140,107 | 6% | 561 | 313 | 48% | 230 | 41% | 102 | 18% | 479 | 85% | 810 | 5,058 | 583 | 3,711 | 975 | 5,058 | 83 | 81% | 812 | 3,180 | 715 | 1,803 | 922 | 3,180 | 65 | 36 | 64% |
| pacBioSII-Uci-CapTrap_HpreCap_0+_Mix02Rep1 | ali-mortazavi-h1_es_2,ali-mortazavi-h1_de_2 | 2021-05-01 | 2021-05-30 | Uci | pacBioSII | Human | Mix | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 2 | 1 | False | LRGASP | 30 | NA | 1,814,575 | 1,153 | 1,279 | 7,811 | 98% | 1,655,164 | 93% | 92% | 24,601 | 1.49% | 1,407 | 6,512 | 84% | 87% | 66% | 19,991,024 | 609,582 | 3% | 8,501,452 | 43% | 8,304,605 | 42% | 1,207,111 | 6% | 104,178 | 1% | 1,264,096 | 6% | 542 | 304 | 49% | 236 | 44% | 103 | 19% | 456 | 84% | 843 | 5,524 | 546 | 5,524 | 998 | 4,706 | 87 | 84% | 899 | 3,181 | 776 | 2,846 | 946 | 3,181 | 63 | 35 | 61% |
| pacBioSII-Uci-CapTrap_HpreCap_0+_Mix03Rep1 | ali-mortazavi-h1_es_3,ali-mortazavi-h1_de_3 | 2021-05-01 | 2021-05-30 | Uci | pacBioSII | Human | Mix | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 3 | 1 | False | LRGASP | 30 | NA | 1,779,814 | 1,134 | 1,264 | 6,835 | 99% | 1,644,229 | 93% | 94% | 25,456 | 1.55% | 1,421 | 5,890 | 79% | 87% | 67% | 20,408,635 | 796,799 | 4% | 8,568,977 | 42% | 7,820,612 | 38% | 1,358,084 | 7% | 118,844 | 1% | 1,745,319 | 9% | 701 | 398 | 47% | 325 | 46% | 128 | 18% | 613 | 87% | 927 | 4,544 | 686 | 4,476 | 1,096 | 4,544 | 112 | 88% | 951 | 3,540 | 809 | 3,273 | 1,022 | 3,540 | 77 | 44 | 60% |
| pacBioSII-Uci-SmartSeq2_HpreCap_0+_Mix01Rep1 | ali-mortazavi-h1_es_1,ali-mortazavi-h1_de_1 | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Human | Mix | SmartSeq2 | Maxima | HpreCap | 0+ | Total | True | 1 | 1 | False | LRGASP | 30 | NA | 1,224,735 | 2,439 | 2,708 | 18,308 | 99% | 1,108,189 | 91% | 92% | 25,492 | 2.30% | 2,834 | 16,509 | 79% | 88% | 86% | 40,147,583 | 1,414,122 | 4% | 17,296,572 | 43% | 16,427,733 | 41% | 1,744,750 | 4% | 115,612 | 0% | 3,148,794 | 8% | 541 | 446 | 43% | 180 | 33% | 77 | 14% | 511 | 94% | 2,097 | 11,308 | 1,738 | 11,308 | 2,520 | 9,398 | 67 | 87% | 2,523 | 6,792 | 1,770 | 6,792 | 2,595 | 4,751 | 39 | 32 | 51% |
| pacBioSII-Uci-SmartSeq2_HpreCap_0+_Mix01Rep2 | ali-mortazavi-h1_es_1,ali-mortazavi-h1_de_1 | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Human | Mix | SmartSeq2 | Maxima | HpreCap | 0+ | Total | True | 1 | 2 | False | LRGASP | 30 | NA | 1,422,312 | 2,318 | 2,575 | 19,194 | 99% | 1,296,868 | 92% | 92% | 27,645 | 2.13% | 2,714 | 15,847 | 80% | 88% | 85% | 40,665,611 | 1,503,051 | 4% | 17,230,427 | 42% | 16,659,269 | 41% | 1,862,767 | 5% | 121,415 | 0% | 3,288,682 | 8% | 599 | 424 | 41% | 213 | 36% | 91 | 15% | 577 | 96% | 2,294 | 11,310 | 1,947 | 11,310 | 2,534 | 9,276 | 83 | 91% | 2,185 | 6,792 | 1,736 | 6,792 | 2,409 | 5,999 | 46 | 33 | 51% |
| pacBioSII-Uci-SmartSeq2_HpreCap_0+_Mix02Rep1 | ali-mortazavi-h1_es_2,ali-mortazavi-h1_de_2 | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Human | Mix | SmartSeq2 | Maxima | HpreCap | 0+ | Total | True | 2 | 1 | False | LRGASP | 30 | NA | 1,067,276 | 2,330 | 2,530 | 18,192 | 99% | 979,475 | 92% | 92% | 23,120 | 2.36% | 2,646 | 14,292 | 87% | 88% | 87% | 35,762,968 | 1,117,588 | 3% | 15,854,434 | 44% | 14,929,275 | 42% | 1,455,493 | 4% | 105,970 | 0% | 2,300,208 | 6% | 431 | 406 | 43% | 156 | 36% | 76 | 18% | 406 | 94% | 2,298 | 11,315 | 2,041 | 11,315 | 2,438 | 9,776 | 67 | 88% | 2,239 | 6,739 | 1,904 | 6,739 | 2,466 | 5,313 | 36 | 34 | 47% |
| pacBioSII-Uci-SmartSeq2_HpreCap_0+_Mix02Rep2 | ali-mortazavi-h1_es_2,ali-mortazavi-h1_de_2 | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Human | Mix | SmartSeq2 | Maxima | HpreCap | 0+ | Total | True | 2 | 2 | False | LRGASP | 30 | NA | 1,302,398 | 2,424 | 2,678 | 18,327 | 99% | 1,193,319 | 92% | 92% | 26,943 | 2.26% | 2,794 | 14,293 | 86% | 88% | 87% | 41,231,922 | 1,497,286 | 4% | 17,492,241 | 42% | 16,896,420 | 41% | 1,867,088 | 5% | 125,757 | 0% | 3,353,130 | 8% | 509 | 393 | 40% | 182 | 36% | 73 | 14% | 481 | 94% | 2,485 | 11,315 | 2,335 | 11,315 | 2,576 | 10,364 | 65 | 89% | 2,420 | 7,107 | 2,006 | 7,107 | 2,568 | 6,059 | 39 | 30 | 53% |
| pacBioSII-Uci-SmartSeq2_HpreCap_0+_Mix03Rep1 | ali-mortazavi-h1_es_3,ali-mortazavi-h1_de_3 | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Human | Mix | SmartSeq2 | Maxima | HpreCap | 0+ | Total | True | 3 | 1 | False | LRGASP | 30 | NA | 634,866 | 2,405 | 2,650 | 17,823 | 99% | 578,432 | 92% | 92% | 17,172 | 2.97% | 2,697 | 12,967 | 89% | 87% | 90% | 31,027,075 | 828,209 | 3% | 14,325,402 | 46% | 13,071,605 | 42% | 1,078,884 | 3% | 80,609 | 0% | 1,642,366 | 5% | 287 | 456 | 44% | 106 | 37% | 48 | 17% | 268 | 93% | 2,528 | 11,308 | 2,423 | 11,308 | 2,534 | 9,276 | 43 | 90% | 2,623 | 6,791 | 4,920 | 6,791 | 2,577 | 6,614 | 28 | 44 | 58% |
| pacBioSII-Uci-SmartSeq2_HpreCap_0+_Mix03Rep2 | ali-mortazavi-h1_es_3,ali-mortazavi-h1_de_3 | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Human | Mix | SmartSeq2 | Maxima | HpreCap | 0+ | Total | True | 3 | 2 | False | LRGASP | 30 | NA | 1,077,456 | 2,164 | 2,481 | 18,209 | 99% | 984,278 | 92% | 91% | 23,275 | 2.36% | 2,596 | 14,289 | 87% | 88% | 87% | 36,782,195 | 1,181,702 | 3% | 16,237,639 | 44% | 15,191,466 | 41% | 1,589,388 | 4% | 118,225 | 0% | 2,463,775 | 7% | 489 | 457 | 39% | 175 | 36% | 73 | 15% | 458 | 94% | 2,204 | 11,312 | 2,129 | 11,312 | 2,308 | 10,364 | 65 | 89% | 2,263 | 8,276 | 2,330 | 8,276 | 2,206 | 5,397 | 43 | 40 | 59% |
| ont-Crg-CapTrap_Hv3_0+_Placenta01Rep1 | CRG_CRG0014_HSPlacenta_pool_20211119 | 2021-12-27 | 2022-01-22 | Crg | ONT | Human | Placenta | CapTrap | PrimeScript II | Hv3 | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 9,484,051 | 1,254 | 1,360 | 16,239 | 99% | 4,877,442 | 52% | 93% | 48,323 | 0.99% | 899 | 4,646 | 53% | 57% | 54% | 16,171,495 | 4,190,173 | 26% | 3,250,372 | 20% | 3,154,259 | 20% | 2,459,878 | 15% | 712,402 | 4% | 2,404,411 | 15% | 3,426 | 365 | 58% | 2,419 | 71% | 658 | 19% | 2,421 | 71% | 800 | 3,159 | 720 | 3,159 | 812 | 2,864 | 485 | 74% | 806 | 2,859 | 741 | 2,401 | 829 | 2,859 | 464 | 49 | 71% |
| ont-Crg-CapTrap_Hv3_0+_Testis01Rep1 | Zyagen_HR401_HSTestis_20140513 | 2021-11-08 | 2021-11-16 | Crg | ONT | Human | Testis | CapTrap | PrimeScript II | Hv3 | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 4,011,709 | 923 | 1,073 | 11,246 | 99% | 2,129,480 | 54% | 91% | 58,930 | 2.77% | 674 | 3,939 | 48% | 40% | 34% | 18,744,217 | 6,895,458 | 37% | 2,355,552 | 13% | 2,126,908 | 11% | 3,358,281 | 18% | 833,279 | 4% | 3,174,739 | 17% | 7,389 | 1,863 | 62% | 5,756 | 78% | 885 | 12% | 5,268 | 71% | 612 | 2,491 | 578 | 2,389 | 617 | 2,491 | 713 | 81% | 663 | 2,389 | 658 | 2,389 | 663 | 2,194 | 649 | 164 | 73% |
| ont-Crg-CapTrap_Hv3_0+_Testis01Rep2 | Zyagen_HR401_HSTestis_20140513 | 2021-11-08 | 2022-02-03 | Crg | ONT | Human | Testis | CapTrap | PrimeScript II | Hv3 | 0+ | Total | True | 1 | 2 | False | GENCODE | 10 | NA | 4,819,278 | 957 | 1,109 | 241,586 | 99% | 2,809,803 | 59% | 86% | 77,572 | 2.76% | 684 | 3,939 | 62% | 47% | 32% | 24,493,198 | 9,475,815 | 39% | 2,797,365 | 11% | 2,697,492 | 11% | 3,989,734 | 16% | 1,031,928 | 4% | 4,500,864 | 18% | 10,085 | 2,108 | 61% | 6,910 | 69% | 1,186 | 12% | 7,070 | 70% | 621 | 2,620 | 578 | 2,620 | 631 | 2,548 | 954 | 80% | 670 | 2,391 | 673 | 2,391 | 670 | 2,194 | 813 | 170 | 69% |
| ont-Crg-CapTrap_Hv3_0+_Testis01Rep3 | Zyagen_HR401_HSTestis_20140513 | 2021-11-08 | 2022-02-07 | Crg | ONT | Human | Testis | CapTrap | PrimeScript II | Hv3 | 0+ | Total | True | 1 | 3 | False | GENCODE | 10 | NA | 4,819,278 | 957 | 1,109 | 241,586 | 99% | 2,809,803 | 59% | 86% | 77,572 | 2.76% | 684 | 3,939 | 62% | 47% | 32% | 24,493,198 | 9,475,815 | 39% | 2,797,365 | 11% | 2,697,492 | 11% | 3,989,734 | 16% | 1,031,928 | 4% | 4,500,864 | 18% | 10,085 | 2,108 | 61% | 6,910 | 69% | 1,186 | 12% | 7,070 | 70% | 621 | 2,620 | 578 | 2,620 | 631 | 2,548 | 954 | 80% | 670 | 2,391 | 673 | 2,391 | 670 | 2,194 | 813 | 170 | 69% |
| ont-Crg-CapTrap_Hv3_0+_Testis01Rep4 | Zyagen_HR401_HSTestis_20140513 | 2021-11-08 | 2022-02-09 | Crg | ONT | Human | Testis | CapTrap | PrimeScript II | Hv3 | 0+ | Total | True | 1 | 4 | False | GENCODE | 10 | NA | 4,670,142 | 926 | 1,075 | 34,612 | 99% | 2,889,794 | 62% | 92% | 77,466 | 2.68% | 697 | 4,390 | 52% | 44% | 34% | 23,350,964 | 8,818,581 | 38% | 2,861,757 | 12% | 2,543,485 | 11% | 3,917,193 | 17% | 975,316 | 4% | 4,234,632 | 18% | 8,788 | 1,900 | 61% | 6,803 | 77% | 1,052 | 12% | 6,373 | 73% | 626 | 2,491 | 591 | 2,456 | 631 | 2,491 | 857 | 81% | 678 | 2,388 | 681 | 2,388 | 678 | 2,194 | 773 | 167 | 73% |
| ont-Crg-CapTrap_Hv3_0+_Testis01Rep5 | Zyagen_HR401_HSTestis_20140513 | 2021-11-08 | 2022-04-01 | Crg | ONT | Human | Testis | CapTrap | PrimeScript II | Hv3 | 0+ | Total | True | 1 | 5 | False | GENCODE | 10 | NA | 5,609,572 | 7 | 7 | 7 | 80% | 1,993,856 | 44% | 91% | 56,328 | 2.83% | 730 | 3,860 | 55% | 38% | 35% | 19,331,204 | 7,084,338 | 37% | 2,424,345 | 13% | 2,204,001 | 11% | 3,448,070 | 18% | 868,001 | 4% | 3,302,449 | 17% | 6,955 | 1,541 | 62% | 5,370 | 77% | 888 | 13% | 5,135 | 74% | 674 | 2,491 | 651 | 2,388 | 677 | 2,491 | 733 | 83% | 712 | 2,388 | 708 | 2,388 | 712 | 2,098 | 641 | 142 | 72% |
| ont-Crg-CapTrap_Mv2_0+_Testis01Rep1 | Zyagen_MR401C57_MMTestis_20210504 | 2021-06-14 | 2021-06-19 | Crg | ONT | Mouse | Testis | CapTrap | PrimeScript II | Mv2 | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 4,387,516 | 867 | 1,015 | 13,757 | 99% | 2,346,967 | 54% | 86% | 56,588 | 2.41% | 654 | 3,704 | 75% | 18% | 34% | 16,449,979 | 8,218,231 | 50% | 2,467,349 | 15% | 1,660,147 | 10% | 1,689,025 | 10% | 400,272 | 2% | 2,014,955 | 12% | 9,692 | 2,225 | 69% | 7,418 | 77% | 1,396 | 14% | 6,799 | 70% | 614 | 3,196 | 513 | 3,196 | 626 | 2,817 | 1,042 | 75% | 658 | 2,947 | 635 | 2,947 | 660 | 2,348 | 1,089 | 250 | 78% |
| ont-Crg-CapTrap_Hv3_0+_TpoolA01Rep1 | CRG_CRG0012_HSTissue_pool_20210316 | 2021-06-08 | 2021-06-17 | Crg | ONT | Human | TpoolA | CapTrap | PrimeScript II | Hv3 | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 3,504,968 | 871 | 1,043 | 12,778 | 97% | 1,555,340 | 46% | 92% | 24,056 | 1.55% | 778 | 3,920 | 66% | 52% | 57% | 8,511,071 | 1,726,004 | 20% | 2,042,148 | 24% | 1,834,108 | 22% | 1,576,733 | 19% | 363,799 | 4% | 968,279 | 11% | 1,965 | 579 | 61% | 1,442 | 73% | 468 | 24% | 1,180 | 60% | 634 | 2,772 | 583 | 1,873 | 645 | 2,772 | 299 | 64% | 632 | 2,369 | 621 | 1,868 | 636 | 2,369 | 314 | 93 | 67% |
| ont-Crg-CapTrap_Mv2_0+_TpoolB01Rep1 | CRG_CRG0013_MMTissue_pool_20210316 | 2021-06-14 | 2021-06-19 | Crg | ONT | Mouse | TpoolB | CapTrap | PrimeScript II | Mv2 | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 6,136,691 | 725 | 873 | 10,115 | 98% | 3,092,434 | 51% | 86% | 58,652 | 1.90% | 591 | 3,702 | 64% | 37% | 37% | 16,867,720 | 8,289,484 | 49% | 2,279,610 | 14% | 1,882,419 | 11% | 2,038,222 | 12% | 400,607 | 2% | 1,977,378 | 12% | 11,377 | 1,884 | 72% | 7,769 | 68% | 1,949 | 17% | 7,151 | 63% | 551 | 2,898 | 456 | 2,898 | 571 | 2,344 | 1,332 | 68% | 595 | 2,898 | 550 | 2,898 | 598 | 1,918 | 1,397 | 231 | 72% |
| ont-Crg-CapTrap_HpreCap_0+_WBlood01Rep1 | CRG_HSaWBLOOD_20191127 | 2020-05-28 | 2020-12-12 | Crg | ONT | Human | WBlood | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 14,039,743 | 1,087 | 1,173 | 15,690 | 100% | 7,825,552 | 56% | 98% | 32,994 | 0.42% | 871 | 4,832 | 16% | 68% | 75% | 12,240,751 | 657,224 | 5% | 4,820,073 | 39% | 4,133,434 | 34% | 1,246,862 | 10% | 237,676 | 2% | 1,145,482 | 9% | 997 | 71 | 35% | 807 | 81% | 342 | 34% | 801 | 80% | 656 | 2,447 | 619 | 1,752 | 668 | 2,447 | 297 | 87% | 689 | 2,253 | 652 | 1,735 | 696 | 2,253 | 263 | 19 | 77% |
| ont-Crg-CapTrap_Hv3_0+_WBlood01Rep1 | CRG_HSaWBLOOD_20191127 | 2020-09-28 | 2020-12-13 | Crg | ONT | Human | WBlood | CapTrap | PrimeScript II | Hv3 | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 7,098,836 | 676 | 807 | 9,311 | 99% | 3,540,978 | 51% | 95% | 34,226 | 0.97% | 683 | 3,865 | 44% | 46% | 59% | 8,920,500 | 1,722,573 | 19% | 2,329,067 | 26% | 2,025,170 | 23% | 1,381,973 | 15% | 363,328 | 4% | 1,098,389 | 12% | 2,205 | 315 | 52% | 1,619 | 73% | 554 | 25% | 1,377 | 62% | 560 | 2,625 | 458 | 1,790 | 583 | 2,625 | 363 | 66% | 593 | 2,625 | 499 | 1,486 | 614 | 2,625 | 366 | 52 | 66% |
| ont-Crg-CapTrap_MpreCap_0+_WBlood01Rep1 | CRG_CRG0004_MMaWBLOOD_20200109 | 2020-05-05 | 2020-12-10 | Crg | ONT | Mouse | WBlood | CapTrap | PrimeScript II | MpreCap | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 11,483,034 | 765 | 868 | 9,377 | 99% | 7,573,852 | 66% | 99% | 16,719 | 0.22% | 779 | 4,170 | 20% | 65% | 66% | 7,144,635 | 549,637 | 8% | 3,055,154 | 43% | 2,359,439 | 33% | 476,472 | 7% | 95,057 | 1% | 608,876 | 9% | 953 | 83 | 54% | 614 | 64% | 277 | 29% | 728 | 76% | 530 | 2,746 | 392 | 2,746 | 583 | 2,669 | 201 | 73% | 560 | 2,038 | 522 | 1,606 | 592 | 2,038 | 166 | 15 | 60% |
| ont-Crg-CapTrap_Mv2_0+_WBlood01Rep1 | CRG_MMaWBLOOD1_20200824 | 2020-08-24 | 2020-12-14 | Crg | ONT | Mouse | WBlood | CapTrap | PrimeScript II | Mv2 | 0+ | Total | True | 1 | 1 | False | GENCODE | 10 | NA | 11,153,345 | 1,064 | 1,139 | 9,660 | 99% | 5,298,117 | 48% | 93% | 40,118 | 0.76% | 765 | 3,896 | 36% | 53% | 51% | 11,178,394 | 3,855,581 | 34% | 2,319,811 | 21% | 1,907,049 | 17% | 1,282,897 | 11% | 332,029 | 3% | 1,481,027 | 13% | 4,136 | 374 | 67% | 2,475 | 60% | 905 | 22% | 2,727 | 66% | 658 | 2,951 | 548 | 2,951 | 687 | 2,847 | 631 | 70% | 694 | 2,951 | 626 | 2,951 | 714 | 2,588 | 540 | 49 | 60% |
| pacBioSII-Cshl-CapTrap_HpreCap_0+_WBlood01Rep1 | CRG_HSaWBLOOD_20191127 | 2020-09-01 | 2021-06-09 | Cshl | pacBioSII | Human | WBlood | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 1 | 1 | False | GENCODE | 30 | NA | 4,494,420 | 715 | 849 | 6,806 | 99% | 4,143,425 | 93% | 97% | 21,054 | 0.51% | 1,044 | 4,828 | 75% | 85% | 79% | 12,634,081 | 459,296 | 4% | 5,676,685 | 45% | 4,550,019 | 36% | 1,050,399 | 8% | 92,580 | 1% | 805,102 | 6% | 619 | 139 | 43% | 401 | 65% | 283 | 46% | 491 | 79% | 602 | 3,074 | 442 | 2,679 | 645 | 3,074 | 235 | 83% | 643 | 2,679 | 528 | 2,679 | 688 | 2,028 | 191 | 43 | 67% |
| pacBioSII-Cshl-CapTrap_Hv3_0+_WBlood01Rep1 | CRG_HSaWBLOOD_20191127 | 2020-09-01 | 2021-05-14 | Cshl | pacBioSII | Human | WBlood | CapTrap | PrimeScript II | Hv3 | 0+ | Total | True | 1 | 1 | False | GENCODE | 30 | NA | 790,371 | 832 | 957 | 5,745 | 100% | 696,643 | 89% | 95% | 9,765 | 1.40% | 925 | 4,566 | 88% | 32% | 70% | 5,386,057 | 607,587 | 11% | 1,988,977 | 37% | 1,521,082 | 28% | 730,483 | 14% | 166,627 | 3% | 371,301 | 7% | 543 | 690 | 60% | 356 | 66% | 207 | 38% | 335 | 62% | 686 | 2,420 | 641 | 1,846 | 699 | 2,420 | 134 | 65% | 669 | 2,278 | 655 | 1,846 | 677 | 2,278 | 133 | 169 | 64% |
| pacBioSII-Cshl-CapTrap_MpreCap_0+_WBlood01Rep1 | CRG_CRG0004_MMaWBLOOD_20200109 | 2020-09-01 | 2021-06-10 | Cshl | pacBioSII | Mouse | WBlood | CapTrap | PrimeScript II | MpreCap | 0+ | Total | True | 1 | 1 | False | GENCODE | 30 | NA | 6,499,317 | 715 | 784 | 5,442 | 99% | 6,100,762 | 95% | 99% | 17,893 | 0.29% | 1,089 | 4,464 | 77% | 85% | 70% | 11,789,334 | 816,334 | 7% | 5,253,917 | 45% | 3,875,353 | 33% | 726,354 | 6% | 71,423 | 1% | 1,045,953 | 9% | 1,043 | 162 | 58% | 568 | 54% | 336 | 32% | 825 | 79% | 665 | 3,404 | 435 | 2,776 | 762 | 3,404 | 253 | 75% | 672 | 3,404 | 628 | 2,427 | 706 | 3,404 | 187 | 29 | 56% |
| pacBioSII-Cshl-CapTrap_Mv2_0+_WBlood01Rep1 | CRG_MMaWBLOOD1_20200824 | 2020-09-01 | 2021-05-14 | Cshl | pacBioSII | Mouse | WBlood | CapTrap | PrimeScript II | Mv2 | 0+ | Total | True | 1 | 1 | False | GENCODE | 30 | NA | 1,040,276 | 845 | 968 | 5,066 | 100% | 855,583 | 82% | 94% | 11,732 | 1.37% | 953 | 4,297 | 94% | 47% | 59% | 6,024,112 | 1,548,927 | 26% | 1,751,704 | 29% | 1,272,711 | 21% | 753,653 | 13% | 111,468 | 2% | 585,649 | 10% | 1,298 | 1,251 | 74% | 787 | 61% | 385 | 30% | 879 | 68% | 779 | 3,110 | 681 | 2,368 | 814 | 3,110 | 260 | 68% | 781 | 2,489 | 725 | 2,256 | 803 | 2,489 | 237 | 228 | 62% |
| ont-Crg-CapTrap_HpreCap_0+_WTC1101Rep1 | ENCBS944CBA | 2020-09-10 | 2021-03-01 | Crg | ONT | Human | WTC11 | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 1 | 1 | False | LRGASP | 10 | NA | 19,311,259 | 767 | 975 | 13,080 | 98% | 11,655,738 | 61% | 96% | 61,635 | 0.53% | 892 | 5,480 | 9% | 69% | 66% | 23,140,331 | 1,553,758 | 7% | 8,148,656 | 35% | 8,442,869 | 36% | 2,223,842 | 10% | 324,971 | 1% | 2,446,235 | 11% | 2,214 | 117 | 45% | 1,402 | 63% | 412 | 19% | 1,787 | 81% | 638 | 3,710 | 455 | 3,710 | 680 | 3,451 | 344 | 83% | 703 | 3,015 | 650 | 1,917 | 720 | 3,015 | 291 | 15 | 71% |
| ont-Crg-CapTrap_HpreCap_0+_WTC1102Rep1 | ENCBS593PKA | 2020-09-14 | 2021-03-01 | Crg | ONT | Human | WTC11 | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 2 | 1 | False | LRGASP | 10 | NA | 13,965,776 | 736 | 939 | 14,209 | 98% | 8,408,854 | 62% | 96% | 48,912 | 0.58% | 874 | 5,880 | 10% | 68% | 66% | 19,579,499 | 1,191,861 | 6% | 7,254,966 | 37% | 7,324,075 | 37% | 1,797,402 | 9% | 249,092 | 1% | 1,762,103 | 9% | 1,780 | 130 | 44% | 1,105 | 62% | 337 | 19% | 1,418 | 80% | 621 | 4,706 | 428 | 3,710 | 674 | 4,706 | 279 | 83% | 677 | 3,036 | 650 | 1,892 | 685 | 3,036 | 234 | 17 | 69% |
| ont-Crg-CapTrap_HpreCap_0+_WTC1103Rep1 | ENCBS474NOC | 2020-09-14 | 2021-03-02 | Crg | ONT | Human | WTC11 | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 3 | 1 | False | LRGASP | 10 | NA | 17,625,268 | 765 | 975 | 11,980 | 98% | 10,901,877 | 63% | 95% | 56,867 | 0.52% | 915 | 5,441 | 10% | 72% | 67% | 21,689,790 | 1,151,264 | 5% | 7,834,287 | 36% | 8,206,632 | 38% | 1,925,342 | 9% | 284,104 | 1% | 2,288,161 | 11% | 1,869 | 108 | 42% | 1,007 | 54% | 330 | 18% | 1,509 | 81% | 620 | 3,720 | 425 | 3,710 | 690 | 3,720 | 277 | 84% | 663 | 3,720 | 622 | 1,968 | 673 | 3,720 | 206 | 12 | 62% |
| ont-Ucsc-dRNA_HpreCap_0+_WTC1101Rep1 | ENCBS944CBA | 2020-09-10 | 2021-05-05 | Ucsc | ONT | Human | WTC11 | directRNA | None | HpreCap | 0+ | Total | True | 1 | 1 | False | LRGASP | 10 | NA | 758,495 | 871 | 1,150 | 14,299 | 99% | 359,805 | 48% | 96% | 7,054 | 1.96% | 1,307 | 7,219 | 46% | 68% | 58% | 8,044,589 | 93,821 | 1% | 4,168,074 | 52% | 3,470,499 | 43% | 210,015 | 3% | 21,439 | 0% | 80,741 | 1% | 88 | 118 | 50% | 78 | 89% | 11 | 12% | 71 | 81% | 750 | 4,560 | 1,086 | 4,560 | 740 | 3,238 | 9 | 82% | 668 | 2,890 | 371 | 961 | 698 | 2,890 | 8 | 11 | 73% |
| ont-Ucsc-dRNA_HpreCap_0+_WTC1102Rep1 | ENCBS593PKA | 2020-09-14 | 2021-05-11 | Ucsc | ONT | Human | WTC11 | directRNA | None | HpreCap | 0+ | Total | True | 2 | 1 | False | LRGASP | 10 | NA | 1,808,049 | 975 | 1,315 | 36,353 | 98% | 878,589 | 50% | 96% | 14,498 | 1.65% | 1,625 | 10,270 | 31% | 69% | 66% | 18,173,877 | 337,022 | 2% | 9,020,114 | 50% | 7,862,854 | 43% | 509,183 | 3% | 60,917 | 0% | 383,787 | 2% | 187 | 106 | 45% | 166 | 89% | 28 | 15% | 155 | 83% | 848 | 6,260 | 1,094 | 5,853 | 840 | 6,260 | 23 | 82% | 822 | 4,297 | 551 | 1,528 | 943 | 4,297 | 20 | 11 | 71% |
| ont-Ucsc-dRNA_HpreCap_0+_WTC1103Rep1 | ENCBS474NOC | 2020-09-14 | 2021-05-05 | Ucsc | ONT | Human | WTC11 | directRNA | None | HpreCap | 0+ | Total | True | 3 | 1 | False | LRGASP | 10 | NA | 421,886 | 828 | 1,069 | 13,578 | 99% | 209,237 | 50% | 96% | 4,674 | 2.23% | 1,192 | 6,332 | 57% | 66% | 59% | 5,091,597 | 38,566 | 1% | 2,755,297 | 54% | 2,141,443 | 42% | 116,878 | 2% | 10,029 | 0% | 29,384 | 1% | 34 | 82 | 56% | 31 | 91% | 5 | 15% | 25 | 74% | 758 | 2,504 | 1,026 | 1,284 | 730 | 2,504 | 3 | 60% | 698 | 1,026 | 675 | 1,026 | 698 | 888 | 3 | 7 | 60% |
| ont-Ucsc-PcrOnt_HpreCap_1+_WTC1101Rep1 | ENCBS944CBA | 2020-09-10 | 2021-05-05 | Ucsc | ONT | Human | WTC11 | PcrOnt | Maxima | HpreCap | 1+ | Total | True | 1 | 1 | False | LRGASP | 10 | NA | 10,939,622 | 741 | 892 | 102,027 | 84% | 4,910,935 | 54% | 86% | 40,820 | 0.83% | 851 | 12,322 | 11% | 72% | 61% | 19,223,136 | 1,035,886 | 5% | 7,398,970 | 38% | 7,972,191 | 41% | 1,321,277 | 7% | 192,574 | 1% | 1,302,238 | 7% | 1,969 | 215 | 43% | 971 | 49% | 194 | 10% | 1,567 | 80% | 554 | 5,745 | 305 | 5,745 | 681 | 4,661 | 160 | 82% | 682 | 3,754 | 386 | 1,537 | 728 | 3,754 | 144 | 16 | 74% |
| ont-Ucsc-PcrOnt_HpreCap_1+_WTC1102Rep1 | ENCBS593PKA | 2020-09-14 | 2021-05-06 | Ucsc | ONT | Human | WTC11 | PcrOnt | Maxima | HpreCap | 1+ | Total | True | 2 | 1 | False | LRGASP | 10 | NA | 16,644,242 | 739 | 885 | 92,287 | 83% | 7,811,310 | 57% | 83% | 64,683 | 0.83% | 847 | 10,409 | 8% | 72% | 55% | 29,038,461 | 2,107,815 | 7% | 9,893,276 | 34% | 11,524,569 | 40% | 2,096,816 | 7% | 265,287 | 1% | 3,150,698 | 11% | 4,827 | 349 | 37% | 2,011 | 42% | 333 | 7% | 3,859 | 80% | 486 | 6,583 | 309 | 5,840 | 671 | 6,583 | 278 | 83% | 696 | 4,507 | 394 | 2,440 | 734 | 4,507 | 235 | 17 | 71% |
| ont-Ucsc-PcrOnt_HpreCap_1+_WTC1103Rep1 | ENCBS474NOC | 2020-09-14 | 2021-05-06 | Ucsc | ONT | Human | WTC11 | PcrOnt | Maxima | HpreCap | 1+ | Total | True | 3 | 1 | False | LRGASP | 10 | NA | 23,610,671 | 798 | 990 | 154,772 | 85% | 11,992,484 | 59% | 86% | 90,865 | 0.76% | 988 | 12,321 | 7% | 72% | 60% | 38,266,102 | 2,935,555 | 8% | 12,310,157 | 32% | 14,364,599 | 38% | 2,873,644 | 8% | 330,372 | 1% | 5,451,775 | 14% | 6,724 | 334 | 37% | 2,638 | 39% | 378 | 6% | 5,518 | 82% | 467 | 6,214 | 315 | 6,214 | 686 | 5,387 | 309 | 82% | 713 | 6,040 | 534 | 6,040 | 765 | 4,510 | 231 | 11 | 61% |
| ont-Ucsc-R2C2_HpreCap_0+_WTC1101Rep1 | ENCBS944CBA | 2020-09-10 | 2021-06-01 | Ucsc | ONT | Human | WTC11 | R2C2 | SMART MMLV | HpreCap | 0+ | Total | True | 1 | 1 | False | LRGASP | 10 | NA | 1,098,954 | 1,317 | 1,480 | 11,146 | 100% | 998,794 | 91% | 94% | 20,253 | 2.03% | 1,617 | 10,368 | 54% | 71% | 82% | 21,051,532 | 533,958 | 3% | 10,549,115 | 50% | 7,696,884 | 37% | 1,061,981 | 5% | 123,444 | 1% | 1,086,150 | 5% | 487 | 444 | 47% | 198 | 41% | 101 | 21% | 430 | 88% | 902 | 5,372 | 885 | 5,372 | 912 | 3,869 | 86 | 85% | 935 | 3,717 | 1,015 | 2,562 | 834 | 3,717 | 56 | 51 | 55% |
| ont-Ucsc-R2C2_HpreCap_0+_WTC1102Rep1 | ENCBS593PKA | 2020-09-14 | 2021-06-01 | Ucsc | ONT | Human | WTC11 | R2C2 | SMART MMLV | HpreCap | 0+ | Total | True | 2 | 1 | False | LRGASP | 10 | NA | 1,008,873 | 1,293 | 1,462 | 10,514 | 100% | 912,864 | 91% | 93% | 19,060 | 2.09% | 1,579 | 8,217 | 51% | 71% | 82% | 19,874,759 | 487,700 | 2% | 10,077,853 | 51% | 7,320,904 | 37% | 901,249 | 5% | 101,901 | 1% | 985,152 | 5% | 488 | 485 | 43% | 202 | 41% | 89 | 18% | 433 | 89% | 887 | 5,197 | 867 | 5,197 | 906 | 3,689 | 70 | 79% | 890 | 3,032 | 1,018 | 2,562 | 850 | 3,032 | 45 | 45 | 51% |
| ont-Ucsc-R2C2_HpreCap_0+_WTC1103Rep1 | ENCBS474NOC | 2020-09-14 | 2021-06-01 | Ucsc | ONT | Human | WTC11 | R2C2 | SMART MMLV | HpreCap | 0+ | Total | True | 3 | 1 | False | LRGASP | 10 | NA | 1,177,885 | 1,359 | 1,516 | 23,265 | 100% | 1,085,350 | 92% | 94% | 20,999 | 1.93% | 1,636 | 8,217 | 54% | 71% | 83% | 21,002,538 | 446,954 | 2% | 10,447,800 | 50% | 7,837,927 | 37% | 1,024,299 | 5% | 87,749 | 0% | 1,157,809 | 6% | 441 | 375 | 41% | 162 | 37% | 79 | 18% | 394 | 89% | 925 | 4,571 | 825 | 4,571 | 996 | 3,624 | 68 | 86% | 1,047 | 3,624 | 1,174 | 2,560 | 874 | 3,624 | 38 | 32 | 48% |
| pacBioSII-Uci-CapTrap_HpreCap_0+_WTC1101Rep1 | ENCBS944CBA | 2021-05-01 | 2021-05-21 | Uci | pacBioSII | Human | WTC11 | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 1 | 1 | False | LRGASP | 30 | NA | 1,752,254 | 1,019 | 1,161 | 6,751 | 98% | 1,598,189 | 93% | 95% | 20,071 | 1.26% | 1,258 | 5,329 | 71% | 87% | 73% | 14,854,270 | 427,491 | 3% | 6,841,723 | 46% | 5,939,612 | 40% | 903,723 | 6% | 89,412 | 1% | 652,309 | 4% | 445 | 259 | 50% | 226 | 51% | 118 | 27% | 375 | 84% | 692 | 4,724 | 446 | 4,724 | 811 | 3,039 | 104 | 88% | 754 | 2,839 | 597 | 1,754 | 824 | 2,839 | 71 | 41 | 60% |
| pacBioSII-Uci-CapTrap_HpreCap_0+_WTC1102Rep1 | ENCBS593PKA | 2021-05-01 | 2021-05-21 | Uci | pacBioSII | Human | WTC11 | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 2 | 1 | False | LRGASP | 30 | NA | 2,061,266 | 873 | 1,026 | 7,611 | 97% | 1,856,388 | 93% | 94% | 20,731 | 1.12% | 1,085 | 5,695 | 66% | 87% | 70% | 13,959,523 | 415,267 | 3% | 6,309,627 | 45% | 5,621,529 | 40% | 901,239 | 6% | 84,656 | 1% | 627,205 | 4% | 560 | 279 | 51% | 268 | 48% | 137 | 24% | 459 | 82% | 655 | 3,710 | 337 | 3,710 | 746 | 2,903 | 114 | 83% | 692 | 2,903 | 584 | 1,752 | 733 | 2,903 | 86 | 43 | 63% |
| pacBioSII-Uci-CapTrap_HpreCap_0+_WTC1103Rep1 | ENCBS474NOC | 2021-05-01 | 2021-05-31 | Uci | pacBioSII | Human | WTC11 | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 3 | 1 | False | LRGASP | 30 | NA | 2,453,678 | 1,027 | 1,169 | 6,681 | 98% | 2,254,474 | 94% | 95% | 24,457 | 1.08% | 1,298 | 5,409 | 63% | 87% | 73% | 16,610,526 | 425,700 | 3% | 7,338,042 | 44% | 6,724,317 | 40% | 1,090,318 | 7% | 92,951 | 1% | 939,198 | 6% | 448 | 186 | 49% | 204 | 46% | 99 | 22% | 382 | 85% | 734 | 3,710 | 432 | 3,710 | 888 | 3,421 | 84 | 85% | 794 | 3,122 | 748 | 2,131 | 926 | 3,122 | 54 | 22 | 55% |
| pacBioSII-Uci-SmartSeq2_HpreCap_0+_WTC1101Rep1 | ENCBS944CBA | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Human | WTC11 | SmartSeq2 | Maxima | HpreCap | 1+ | Total | True | 1 | 1 | False | LRGASP | 30 | NA | 495,763 | 2,369 | 2,644 | 20,704 | 99% | 455,786 | 92% | 92% | 13,786 | 3.02% | 2,630 | 11,308 | 92% | 85% | 91% | 25,973,283 | 633,505 | 2% | 12,457,557 | 48% | 11,093,987 | 43% | 734,318 | 3% | 51,873 | 0% | 1,002,043 | 4% | 184 | 373 | 47% | 72 | 39% | 29 | 16% | 175 | 95% | 2,888 | 11,308 | 3,712 | 11,308 | 2,698 | 9,166 | 28 | 97% | 2,676 | 6,737 | 5,176 | 6,737 | 2,592 | 4,506 | 17 | 34 | 59% |
| pacBioSII-Uci-SmartSeq2_HpreCap_0+_WTC1101Rep2 | ENCBS944CBA | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Human | WTC11 | SmartSeq2 | Maxima | HpreCap | 1+ | Total | True | 1 | 2 | False | LRGASP | 30 | NA | 1,298,880 | 2,766 | 3,048 | 19,928 | 99% | 1,194,927 | 93% | 91% | 27,508 | 2.30% | 3,038 | 16,504 | 91% | 88% | 87% | 43,327,747 | 1,667,296 | 4% | 18,226,746 | 42% | 17,674,631 | 41% | 1,891,660 | 4% | 164,534 | 0% | 3,702,880 | 9% | 406 | 315 | 44% | 176 | 43% | 62 | 15% | 381 | 94% | 2,974 | 12,822 | 3,336 | 12,822 | 2,892 | 11,531 | 55 | 89% | 2,622 | 12,016 | 4,207 | 12,016 | 2,586 | 5,624 | 40 | 31 | 65% |
| pacBioSII-Uci-SmartSeq2_HpreCap_0+_WTC1101Rep3 | ENCBS944CBA | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Human | WTC11 | SmartSeq2 | Maxima | HpreCap | 1+ | Total | True | 1 | 3 | False | LRGASP | 30 | NA | 676,492 | 2,181 | 2,468 | 21,694 | 99% | 617,583 | 92% | 91% | 16,568 | 2.68% | 2,537 | 11,314 | 87% | 88% | 89% | 28,278,048 | 680,907 | 2% | 13,304,167 | 47% | 12,049,636 | 43% | 916,682 | 3% | 71,712 | 0% | 1,254,944 | 4% | 248 | 369 | 46% | 86 | 35% | 24 | 10% | 231 | 93% | 2,182 | 11,314 | 1,735 | 11,314 | 2,462 | 6,666 | 22 | 92% | 2,760 | 6,040 | 4,488 | 6,040 | 2,612 | 4,506 | 15 | 22 | 62% |
| pacBioSII-Uci-SmartSeq2_HpreCap_0+_WTC1102Rep1 | ENCBS944CBA | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Human | WTC11 | SmartSeq2 | Maxima | HpreCap | 1+ | Total | True | 2 | 1 | False | LRGASP | 30 | NA | 306,455 | 1,973 | 2,244 | 14,735 | 99% | 279,674 | 92% | 90% | 10,235 | 3.66% | 2,294 | 11,308 | 92% | 87% | 91% | 19,296,043 | 373,353 | 2% | 9,922,596 | 51% | 8,116,057 | 42% | 409,565 | 2% | 28,235 | 0% | 446,237 | 2% | 144 | 474 | 51% | 71 | 49% | 24 | 17% | 133 | 92% | 2,161 | 11,308 | 2,224 | 11,308 | 1,910 | 11,122 | 21 | 88% | 1,728 | 6,740 | 1,624 | 6,740 | 1,728 | 4,309 | 13 | 43 | 54% |
| pacBioSII-Uci-SmartSeq2_HpreCap_0+_WTC1102Rep2 | ENCBS944CBA | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Human | WTC11 | SmartSeq2 | Maxima | HpreCap | 1+ | Total | True | 2 | 2 | False | LRGASP | 30 | NA | 667,161 | 1,700 | 1,900 | 16,047 | 98% | 600,023 | 91% | 88% | 15,684 | 2.61% | 2,100 | 8,832 | 79% | 87% | 86% | 23,422,653 | 561,522 | 2% | 11,413,489 | 49% | 9,833,427 | 42% | 711,400 | 3% | 65,209 | 0% | 837,606 | 4% | 366 | 557 | 47% | 136 | 37% | 60 | 16% | 339 | 93% | 1,090 | 8,233 | 847 | 8,233 | 1,347 | 6,578 | 53 | 88% | 1,100 | 6,743 | 1,220 | 6,743 | 1,084 | 4,506 | 39 | 59 | 65% |
| pacBioSII-Uci-SmartSeq2_HpreCap_0+_WTC1102Rep3 | ENCBS944CBA | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Human | WTC11 | SmartSeq2 | Maxima | HpreCap | 1+ | Total | True | 2 | 3 | False | LRGASP | 30 | NA | 695,166 | 1,655 | 1,866 | 14,631 | 98% | 621,277 | 91% | 88% | 16,108 | 2.59% | 2,069 | 9,007 | 80% | 88% | 85% | 23,957,097 | 560,464 | 2% | 11,688,883 | 49% | 10,064,736 | 42% | 738,416 | 3% | 65,810 | 0% | 838,788 | 4% | 423 | 620 | 46% | 123 | 29% | 52 | 12% | 390 | 92% | 835 | 6,740 | 375 | 6,719 | 1,203 | 6,740 | 46 | 88% | 1,318 | 6,040 | 1,426 | 6,040 | 1,147 | 4,506 | 27 | 40 | 52% |
| pacBioSII-Uci-SmartSeq2_HpreCap_0+_WTC1103Rep1 | ENCBS944CBA | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Human | WTC11 | SmartSeq2 | Maxima | HpreCap | 1+ | Total | True | 3 | 1 | False | LRGASP | 30 | NA | 727,372 | 2,128 | 2,385 | 15,358 | 99% | 665,658 | 92% | 91% | 17,728 | 2.66% | 2,498 | 14,293 | 92% | 88% | 88% | 29,521,301 | 811,371 | 3% | 13,851,544 | 47% | 12,479,647 | 42% | 993,644 | 3% | 72,470 | 0% | 1,312,625 | 4% | 295 | 409 | 49% | 125 | 42% | 53 | 18% | 275 | 93% | 2,065 | 11,308 | 1,946 | 11,308 | 2,198 | 9,276 | 46 | 87% | 1,606 | 6,740 | 1,621 | 6,740 | 1,590 | 4,506 | 32 | 44 | 60% |
| pacBioSII-Uci-SmartSeq2_HpreCap_0+_WTC1103Rep2 | ENCBS944CBA | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Human | WTC11 | SmartSeq2 | Maxima | HpreCap | 1+ | Total | True | 3 | 2 | False | LRGASP | 30 | NA | 813,624 | 2,091 | 2,334 | 15,998 | 99% | 743,200 | 92% | 91% | 18,717 | 2.52% | 2,474 | 11,708 | 87% | 87% | 88% | 29,960,069 | 883,342 | 3% | 13,891,386 | 46% | 12,637,068 | 42% | 1,032,879 | 3% | 87,534 | 0% | 1,427,860 | 5% | 330 | 410 | 48% | 128 | 39% | 58 | 18% | 305 | 92% | 1,910 | 11,308 | 1,523 | 11,308 | 2,214 | 11,010 | 55 | 95% | 1,542 | 6,740 | 1,482 | 6,740 | 1,730 | 6,233 | 33 | 41 | 57% |
| pacBioSII-Uci-SmartSeq2_HpreCap_0+_WTC1103Rep3 | ENCBS944CBA | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Human | WTC11 | SmartSeq2 | Maxima | HpreCap | 1+ | Total | True | 3 | 3 | False | LRGASP | 30 | NA | 1,422,895 | 2,327 | 2,667 | 20,832 | 100% | 1,310,939 | 93% | 92% | 27,283 | 2.08% | 2,750 | 16,509 | 84% | 87% | 87% | 40,036,098 | 1,440,026 | 4% | 17,043,965 | 43% | 16,361,990 | 41% | 1,783,079 | 4% | 114,763 | 0% | 3,292,275 | 8% | 459 | 324 | 43% | 161 | 35% | 61 | 13% | 441 | 96% | 2,551 | 13,382 | 2,306 | 11,314 | 2,629 | 13,382 | 58 | 95% | 2,713 | 6,792 | 2,359 | 6,792 | 2,891 | 6,720 | 30 | 21 | 49% |