| ont-Crg-CapTrap_HpreCap_0+_Mix...1 |
| ont-Crg-CapTrap_HpreCap_0+_Mix...1 |
| ont-Crg-CapTrap_HpreCap_0+_Mix...1 |
| ont-Crg-CapTrap_HpreCap_0+_WTC...1 |
| ont-Crg-CapTrap_HpreCap_0+_WTC...1 |
| ont-Crg-CapTrap_HpreCap_0+_WTC...1 |
| ont-Crg-CapTrap_MpreCap_0+_F12...1 |
| ont-Crg-CapTrap_MpreCap_0+_F12...1 |
| ont-Crg-CapTrap_MpreCap_0+_F12...1 |
| ont-Ucsc-dRNA_HpreCap_0+_Mix01...1 |
| ont-Ucsc-dRNA_HpreCap_0+_Mix02...1 |
| ont-Ucsc-dRNA_HpreCap_0+_Mix03...1 |
| ont-Ucsc-dRNA_HpreCap_0+_WTC11...1 |
| ont-Ucsc-dRNA_HpreCap_0+_WTC11...1 |
| ont-Ucsc-dRNA_HpreCap_0+_WTC11...1 |
| ont-Ucsc-dRNA_MpreCap_0+_F121-...1 |
| ont-Ucsc-dRNA_MpreCap_0+_F121-...1 |
| ont-Ucsc-dRNA_MpreCap_0+_F121-...1 |
| ont-Ucsc-PcrOnt_HpreCap_1+_Mix...1 |
| ont-Ucsc-PcrOnt_HpreCap_1+_Mix...1 |
| ont-Ucsc-PcrOnt_HpreCap_1+_Mix...1 |
| ont-Ucsc-PcrOnt_HpreCap_1+_WTC...1 |
| ont-Ucsc-PcrOnt_HpreCap_1+_WTC...1 |
| ont-Ucsc-PcrOnt_HpreCap_1+_WTC...1 |
| ont-Ucsc-PcrOnt_MpreCap_1+_F12...1 |
| ont-Ucsc-PcrOnt_MpreCap_1+_F12...1 |
| ont-Ucsc-PcrOnt_MpreCap_1+_F12...1 |
| ont-Ucsc-R2C2_HpreCap_0+_Mix01...1 |
| ont-Ucsc-R2C2_HpreCap_0+_Mix02...1 |
| ont-Ucsc-R2C2_HpreCap_0+_Mix03...1 |
| ont-Ucsc-R2C2_HpreCap_0+_WTC11...1 |
| ont-Ucsc-R2C2_HpreCap_0+_WTC11...1 |
| ont-Ucsc-R2C2_HpreCap_0+_WTC11...1 |
| ont-Ucsc-R2C2_MpreCap_0+_F121-...1 |
| ont-Ucsc-R2C2_MpreCap_0+_F121-...1 |
| ont-Ucsc-R2C2_MpreCap_0+_F121-...1 |
| pacBioSII-Uci-CapTrap_HpreCap_...1 |
| pacBioSII-Uci-CapTrap_HpreCap_...1 |
| pacBioSII-Uci-CapTrap_HpreCap_...1 |
| pacBioSII-Uci-CapTrap_HpreCap_...1 |
| pacBioSII-Uci-CapTrap_HpreCap_...1 |
| pacBioSII-Uci-CapTrap_HpreCap_...1 |
| pacBioSII-Uci-CapTrap_MpreCap_...1 |
| pacBioSII-Uci-CapTrap_MpreCap_...1 |
| pacBioSII-Uci-CapTrap_MpreCap_...1 |
| pacBioSII-Uci-SmartSeq2_HpreCa...1 |
| pacBioSII-Uci-SmartSeq2_HpreCa...1 |
| pacBioSII-Uci-SmartSeq2_HpreCa...1 |
| pacBioSII-Uci-SmartSeq2_HpreCa...1 |
| pacBioSII-Uci-SmartSeq2_HpreCa...1 |
| pacBioSII-Uci-SmartSeq2_HpreCa...1 |
| pacBioSII-Uci-SmartSeq2_HpreCa...1 |
| pacBioSII-Uci-SmartSeq2_HpreCa...1 |
| pacBioSII-Uci-SmartSeq2_HpreCa...1 |
| pacBioSII-Uci-SmartSeq2_HpreCa...1 |
| pacBioSII-Uci-SmartSeq2_HpreCa...1 |
| pacBioSII-Uci-SmartSeq2_HpreCa...1 |
| pacBioSII-Uci-SmartSeq2_HpreCa...1 |
| pacBioSII-Uci-SmartSeq2_HpreCa...1 |
| pacBioSII-Uci-SmartSeq2_HpreCa...1 |
| pacBioSII-Uci-SmartSeq2_MpreCa...1 |
| pacBioSII-Uci-SmartSeq2_MpreCa...1 |
| pacBioSII-Uci-SmartSeq2_MpreCa...1 |
| pacBioSII-Uci-SmartSeq2_MpreCa...1 |
| pacBioSII-Uci-SmartSeq2_MpreCa...1 |
| pacBioSII-Uci-SmartSeq2_MpreCa...1 |
| pacBioSII-Uci-SmartSeq2_MpreCa...1 |
| pacBioSII-Uci-SmartSeq2_MpreCa...1 |
| pacBioSII-Uci-SmartSeq2_MpreCa...1 |
| ONT 36 |
| pacBioSII33 |
| Human45 |
| Mouse24 |
| F121-924 |
| Mix 21 |
| WTC11 24 |
| CapTrap 18 |
| directRNA9 |
| PcrOnt 9 |
| R2C2 9 |
| SmartSeq224 |
| Maxima 33 |
| None 9 |
| PrimeScript II18 |
| SMART MMLV 9 |
| HpreCap45 |
| MpreCap24 |
| 0+51 |
| 1+18 |
| Total69 |
| True69 |
| False69 |
| LRGASP69 |
| sample_name | biosample_id | date sequenced | FASTQ last modified | seq center | seq platform | species | tissue | library prep | reverse transcriptase | capture design | size fraction | cell fraction | capped spike-ins? | bio rep | tech rep | use_matched_HiSeq | subProject | filter_SJ_Qscore | comments | # reads | median read length | mean read length | max read length (FASTQ) | % mapped reads | # HCGM reads | % HCGM reads | % spliced HCGMs | # merged TMs (min. 2 reads) | merge rate | TM median length | TM max length | SIRV Tx Pr | SIRV Tx Sn | % FL TMs | genomic nts covered | # TM nts over intergenic regions | % TM nts over intergenic regions | # TM nts over CDS regions | % TM nts over CDS regions | # TM nts over UTR regions | % TM nts over UTR regions | # TM nts over exons of noncoding transcripts | % TM nts over exons of noncoding transcripts | # TM nts over exons of pseudogenes | % TM nts over exons of pseudogenes | # TM nts over introns | % TM nts over introns | # novel loci | # novel loci per million mapped reads | % novel loci intergenic | # spliced novel loci | % spliced novel loci | # novel loci FL | % novel loci FL | # novel loci on repeats | % novel loci on repeats | median length all TMs (novel loci) | max length all TMs (novel loci) | median length monoexonic TMs (novel loci) | max length monoexonic TMs (novel loci) | median length spliced TMs (novel loci) | max length spliced TMs (novel loci) | # FL novel loci on repeats | % FL novel loci on repeats | median length all TMs (FL novel loci) | max length all TMs (FL novel loci) | median length monoexonic TMs (FL novel loci) | max length monoexonic TMs (FL novel loci) | median length spliced TMs (FL novel loci) | max length spliced TMs (FL novel loci) | # FL spliced novel loci | # FL spliced novel loci per million mapped reads | % FL spliced novel loci |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ont-Crg-CapTrap_MpreCap_0+_F121-901Rep1 | ENCBS648HXY | 2020-09-07 | 2021-02-27 | Crg | ONT | Mouse | F121-9 | CapTrap | PrimeScript II | MpreCap | 0+ | Total | True | 1 | 1 | False | LRGASP | 10 | NA | 16,386,504 | 806 | 1,025 | 11,179 | 98% | 7,307,132 | 45% | 93% | 46,910 | 0.64% | 921 | 5,828 | 10% | 71% | 61% | 20,022,094 | 1,865,027 | 9% | 8,051,145 | 40% | 7,047,675 | 35% | 938,959 | 5% | 361,729 | 2% | 1,757,559 | 9% | 2,923 | 182 | 57% | 1,556 | 53% | 367 | 13% | 2,460 | 84% | 520 | 5,214 | 224 | 5,214 | 636 | 3,489 | 294 | 80% | 646 | 5,214 | 560 | 5,214 | 656 | 3,489 | 239 | 15 | 65% |
| ont-Crg-CapTrap_MpreCap_0+_F121-902Rep1 | ENCBS951CRC | 2020-09-07 | 2021-02-28 | Crg | ONT | Mouse | F121-9 | CapTrap | PrimeScript II | MpreCap | 0+ | Total | True | 2 | 1 | False | LRGASP | 10 | NA | 16,381,186 | 796 | 1,027 | 13,141 | 98% | 7,329,317 | 46% | 92% | 47,075 | 0.64% | 949 | 5,601 | 10% | 72% | 62% | 20,319,885 | 1,821,295 | 9% | 8,282,192 | 41% | 7,206,497 | 35% | 933,020 | 5% | 345,291 | 2% | 1,731,590 | 9% | 2,771 | 173 | 57% | 1,444 | 52% | 348 | 13% | 2,318 | 84% | 520 | 3,315 | 220 | 2,967 | 652 | 3,315 | 270 | 78% | 650 | 3,315 | 552 | 2,440 | 668 | 3,315 | 218 | 14 | 63% |
| ont-Crg-CapTrap_MpreCap_0+_F121-903Rep1 | ENCBS418RDP | 2020-09-10 | 2021-02-28 | Crg | ONT | Mouse | F121-9 | CapTrap | PrimeScript II | MpreCap | 0+ | Total | True | 3 | 1 | False | LRGASP | 10 | NA | 17,930,307 | 780 | 973 | 14,046 | 98% | 8,398,779 | 48% | 93% | 49,049 | 0.58% | 925 | 5,079 | 10% | 71% | 62% | 20,203,427 | 1,921,070 | 10% | 8,251,778 | 41% | 6,992,040 | 35% | 927,487 | 5% | 365,104 | 2% | 1,745,948 | 9% | 3,000 | 170 | 58% | 1,631 | 54% | 388 | 13% | 2,533 | 84% | 515 | 4,142 | 219 | 2,937 | 631 | 4,142 | 301 | 78% | 636 | 4,142 | 553 | 2,937 | 646 | 4,142 | 254 | 14 | 65% |
| ont-Ucsc-dRNA_MpreCap_0+_F121-901Rep1 | ENCBS648HXY | 2020-09-07 | 2021-05-11 | Ucsc | ONT | Mouse | F121-9 | directRNA | None | MpreCap | 0+ | Total | True | 1 | 1 | False | LRGASP | 10 | NA | 958,946 | 920 | 1,220 | 15,784 | 98% | 429,684 | 46% | 95% | 8,395 | 1.95% | 1,474 | 9,086 | 36% | 68% | 66% | 10,392,349 | 231,924 | 2% | 5,624,734 | 54% | 4,205,867 | 40% | 161,126 | 2% | 37,314 | 0% | 131,384 | 1% | 106 | 113 | 63% | 88 | 83% | 17 | 16% | 85 | 80% | 826 | 6,041 | 705 | 3,032 | 830 | 6,041 | 10 | 59% | 751 | 6,041 | 576 | 1,161 | 1,720 | 6,041 | 11 | 12 | 65% |
| ont-Ucsc-dRNA_MpreCap_0+_F121-902Rep1 | ENCBS951CRC | 2020-09-07 | 2021-05-11 | Ucsc | ONT | Mouse | F121-9 | directRNA | None | MpreCap | 0+ | Total | True | 2 | 1 | False | LRGASP | 10 | NA | 2,153,439 | 881 | 1,171 | 17,632 | 95% | 899,232 | 44% | 95% | 13,566 | 1.51% | 1,517 | 11,985 | 25% | 71% | 67% | 15,526,761 | 445,351 | 3% | 8,085,763 | 52% | 6,390,052 | 41% | 270,227 | 2% | 56,456 | 0% | 278,912 | 2% | 212 | 103 | 54% | 169 | 80% | 33 | 16% | 169 | 80% | 730 | 6,893 | 514 | 5,276 | 764 | 6,893 | 27 | 82% | 730 | 5,210 | 632 | 5,210 | 737 | 3,213 | 21 | 10 | 64% |
| ont-Ucsc-dRNA_MpreCap_0+_F121-903Rep1 | ENCBS418RDP | 2020-09-10 | 2021-05-12 | Ucsc | ONT | Mouse | F121-9 | directRNA | None | MpreCap | 0+ | Total | True | 3 | 1 | False | LRGASP | 10 | NA | 863,340 | 897 | 1,203 | 14,850 | 98% | 402,789 | 48% | 96% | 7,949 | 1.97% | 1,505 | 8,305 | 45% | 68% | 64% | 10,326,169 | 198,892 | 2% | 5,643,956 | 55% | 4,186,037 | 41% | 144,736 | 1% | 30,389 | 0% | 122,159 | 1% | 90 | 106 | 61% | 80 | 89% | 14 | 16% | 75 | 83% | 930 | 5,214 | 654 | 5,214 | 940 | 5,210 | 8 | 57% | 496 | 5,214 | 522 | 5,214 | 496 | 2,442 | 8 | 9 | 57% |
| ont-Ucsc-PcrOnt_MpreCap_1+_F121-901Rep1 | ENCBS648HXY | 2020-09-07 | 2021-05-06 | Ucsc | ONT | Mouse | F121-9 | PcrOnt | Maxima | MpreCap | 1+ | Total | True | 1 | 1 | False | LRGASP | 10 | NA | 14,868,929 | 676 | 845 | 46,027 | 79% | 4,919,189 | 42% | 79% | 59,993 | 1.22% | 593 | 11,672 | 10% | 72% | 43% | 25,687,047 | 3,405,681 | 13% | 9,531,206 | 37% | 8,228,308 | 32% | 926,839 | 4% | 278,590 | 1% | 3,316,423 | 13% | 19,768 | 1,678 | 47% | 2,927 | 15% | 275 | 1% | 19,273 | 97% | 200 | 5,381 | 197 | 5,381 | 243 | 5,320 | 228 | 83% | 667 | 5,248 | 518 | 5,248 | 700 | 4,535 | 176 | 15 | 64% |
| ont-Ucsc-PcrOnt_MpreCap_1+_F121-902Rep1 | ENCBS951CRC | 2020-09-07 | 2021-05-06 | Ucsc | ONT | Mouse | F121-9 | PcrOnt | Maxima | MpreCap | 1+ | Total | True | 2 | 1 | False | LRGASP | 10 | NA | 15,391,465 | 641 | 785 | 154,771 | 77% | 4,787,794 | 40% | 84% | 58,346 | 1.22% | 569 | 6,973 | 10% | 72% | 42% | 24,328,933 | 3,275,213 | 13% | 9,166,542 | 38% | 7,618,663 | 31% | 864,557 | 4% | 254,992 | 1% | 3,148,966 | 13% | 18,948 | 1,600 | 46% | 3,236 | 17% | 267 | 1% | 18,398 | 97% | 200 | 6,543 | 197 | 5,318 | 257 | 6,543 | 215 | 81% | 571 | 5,255 | 362 | 5,255 | 624 | 4,743 | 173 | 15 | 65% |
| ont-Ucsc-PcrOnt_MpreCap_1+_F121-903Rep1 | ENCBS418RDP | 2020-09-10 | 2021-05-05 | Ucsc | ONT | Mouse | F121-9 | PcrOnt | Maxima | MpreCap | 1+ | Total | True | 3 | 1 | False | LRGASP | 10 | NA | 26,795,189 | 667 | 812 | 318,722 | 79% | 9,239,859 | 44% | 83% | 95,161 | 1.03% | 638 | 8,353 | 9% | 72% | 42% | 35,578,020 | 5,495,488 | 15% | 12,137,147 | 34% | 10,591,448 | 30% | 1,410,970 | 4% | 349,770 | 1% | 5,593,197 | 16% | 28,332 | 1,335 | 46% | 5,641 | 20% | 425 | 2% | 27,242 | 96% | 203 | 6,875 | 198 | 6,875 | 274 | 6,036 | 327 | 77% | 598 | 6,036 | 417 | 2,966 | 656 | 6,036 | 263 | 12 | 62% |
| ont-Ucsc-R2C2_MpreCap_0+_F121-901Rep1 | ENCBS648HXY | 2020-09-07 | 2021-06-01 | Ucsc | ONT | Mouse | F121-9 | R2C2 | SMART MMLV | MpreCap | 0+ | Total | True | 1 | 1 | False | LRGASP | 10 | NA | 1,188,203 | 1,305 | 1,478 | 12,502 | 99% | 989,986 | 84% | 91% | 18,092 | 1.83% | 1,636 | 8,317 | 54% | 71% | 80% | 20,015,104 | 688,639 | 3% | 10,619,332 | 53% | 7,051,857 | 35% | 555,998 | 3% | 126,902 | 1% | 972,376 | 5% | 1,116 | 945 | 53% | 194 | 17% | 105 | 9% | 1,061 | 95% | 221 | 5,343 | 210 | 5,343 | 862 | 5,296 | 79 | 75% | 818 | 5,210 | 821 | 5,210 | 798 | 3,301 | 51 | 43 | 49% |
| ont-Ucsc-R2C2_MpreCap_0+_F121-902Rep1 | ENCBS951CRC | 2020-09-07 | 2021-06-01 | Ucsc | ONT | Mouse | F121-9 | R2C2 | SMART MMLV | MpreCap | 0+ | Total | True | 2 | 1 | False | LRGASP | 10 | NA | 1,385,825 | 1,315 | 1,485 | 11,731 | 100% | 1,158,168 | 84% | 92% | 19,350 | 1.67% | 1,675 | 9,117 | 55% | 71% | 81% | 20,973,688 | 729,588 | 3% | 11,046,620 | 53% | 7,510,194 | 36% | 557,255 | 3% | 139,656 | 1% | 990,375 | 5% | 941 | 682 | 52% | 219 | 23% | 108 | 11% | 895 | 95% | 244 | 5,302 | 214 | 5,302 | 844 | 5,229 | 91 | 84% | 822 | 5,246 | 894 | 5,246 | 762 | 3,884 | 64 | 46 | 59% |
| ont-Ucsc-R2C2_MpreCap_0+_F121-903Rep1 | ENCBS418RDP | 2020-09-10 | 2021-06-01 | Ucsc | ONT | Mouse | F121-9 | R2C2 | SMART MMLV | MpreCap | 0+ | Total | True | 3 | 1 | False | LRGASP | 10 | NA | 1,278,902 | 1,334 | 1,496 | 17,090 | 100% | 1,074,405 | 84% | 92% | 18,381 | 1.71% | 1,683 | 8,315 | 51% | 69% | 81% | 20,227,039 | 653,374 | 3% | 10,800,379 | 53% | 7,281,131 | 36% | 513,032 | 3% | 138,058 | 1% | 841,065 | 4% | 832 | 653 | 54% | 212 | 25% | 107 | 13% | 774 | 93% | 250 | 5,767 | 213 | 5,767 | 757 | 5,280 | 85 | 79% | 770 | 5,767 | 820 | 5,767 | 704 | 2,940 | 53 | 42 | 50% |
| pacBioSII-Uci-CapTrap_MpreCap_0+_F121-901Rep1 | ENCBS944CBA | 2021-05-01 | 2021-05-30 | Uci | pacBioSII | Mouse | F121-9 | CapTrap | PrimeScript II | MpreCap | 0+ | Total | True | 1 | 1 | False | LRGASP | 30 | NA | 885,020 | 953 | 1,132 | 8,300 | 98% | 696,231 | 80% | 90% | 11,959 | 1.72% | 1,271 | 5,640 | 82% | 87% | 71% | 11,575,081 | 401,007 | 3% | 6,084,167 | 53% | 4,329,065 | 37% | 291,030 | 3% | 82,383 | 1% | 387,429 | 3% | 737 | 849 | 58% | 154 | 21% | 71 | 10% | 687 | 93% | 206 | 3,489 | 198 | 2,819 | 681 | 3,489 | 62 | 87% | 651 | 3,489 | 682 | 2,322 | 651 | 3,489 | 49 | 56 | 69% |
| pacBioSII-Uci-CapTrap_MpreCap_0+_F121-902Rep1 | ENCBS593PKA | 2021-05-01 | 2021-05-31 | Uci | pacBioSII | Mouse | F121-9 | CapTrap | PrimeScript II | MpreCap | 0+ | Total | True | 2 | 1 | False | LRGASP | 30 | NA | 2,717,322 | 995 | 1,132 | 7,432 | 98% | 2,157,697 | 81% | 91% | 22,567 | 1.05% | 1,247 | 5,731 | 69% | 85% | 65% | 17,051,095 | 941,843 | 6% | 8,188,495 | 48% | 6,246,531 | 37% | 578,762 | 3% | 137,446 | 1% | 958,018 | 6% | 1,763 | 660 | 57% | 394 | 22% | 160 | 9% | 1,634 | 93% | 209 | 5,241 | 197 | 5,241 | 760 | 3,316 | 128 | 80% | 774 | 3,316 | 717 | 2,958 | 778 | 3,316 | 104 | 39 | 65% |
| pacBioSII-Uci-CapTrap_MpreCap_0+_F121-903Rep1 | ENCBS474NOC | 2021-05-01 | 2021-05-30 | Uci | pacBioSII | Mouse | F121-9 | CapTrap | PrimeScript II | MpreCap | 0+ | Total | True | 3 | 1 | False | LRGASP | 30 | NA | 1,382,528 | 1,087 | 1,226 | 7,469 | 99% | 1,115,226 | 82% | 92% | 15,326 | 1.37% | 1,391 | 5,806 | 78% | 87% | 73% | 14,251,902 | 566,037 | 4% | 7,354,199 | 52% | 5,313,399 | 37% | 392,421 | 3% | 98,789 | 1% | 527,057 | 4% | 785 | 575 | 59% | 209 | 27% | 101 | 13% | 724 | 92% | 221 | 3,479 | 202 | 2,819 | 781 | 3,479 | 89 | 88% | 726 | 3,313 | 801 | 2,487 | 675 | 3,313 | 72 | 53 | 71% |
| pacBioSII-Uci-SmartSeq2_MpreCap_0+_F121-901Rep1 | ENCBS944CBA | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Mouse | F121-9 | SmartSeq2 | Maxima | MpreCap | 0+ | Total | True | 1 | 1 | False | LRGASP | 30 | NA | 2,000,515 | 1,658 | 1,969 | 18,171 | 92% | 1,532,477 | 83% | 83% | 34,044 | 2.22% | 1,885 | 14,373 | 79% | 88% | 60% | 37,704,717 | 2,789,902 | 7% | 16,495,845 | 44% | 13,446,429 | 36% | 1,109,353 | 3% | 143,311 | 0% | 3,719,877 | 10% | 9,803 | 5,340 | 50% | 312 | 3% | 103 | 1% | 9,757 | 100% | 192 | 10,290 | 191 | 8,067 | 1,634 | 10,290 | 90 | 87% | 1,712 | 7,314 | 1,063 | 5,767 | 2,353 | 7,314 | 68 | 37 | 66% |
| pacBioSII-Uci-SmartSeq2_MpreCap_0+_F121-901Rep2 | ENCBS944CBA | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Mouse | F121-9 | SmartSeq2 | Maxima | MpreCap | 0+ | Total | True | 1 | 2 | False | LRGASP | 30 | NA | 974,705 | 1,757 | 2,010 | 23,650 | 92% | 754,201 | 84% | 85% | 22,261 | 2.95% | 1,910 | 12,016 | 87% | 88% | 65% | 29,685,399 | 1,690,966 | 6% | 14,196,017 | 48% | 11,091,088 | 37% | 679,052 | 2% | 98,557 | 0% | 1,929,719 | 7% | 5,988 | 6,681 | 49% | 157 | 3% | 68 | 1% | 5,968 | 100% | 192 | 8,066 | 192 | 8,066 | 1,987 | 7,006 | 64 | 94% | 2,414 | 6,085 | 1,234 | 5,609 | 2,567 | 6,085 | 46 | 51 | 68% |
| pacBioSII-Uci-SmartSeq2_MpreCap_0+_F121-901Rep3 | ENCBS944CBA | 2021-05-01 | 2021-07-21 | Uci | pacBioSII | Mouse | F121-9 | SmartSeq2 | Maxima | MpreCap | 0+ | Total | True | 1 | 3 | False | LRGASP | 30 | NA | 1,111,767 | 1,768 | 2,050 | 16,962 | 94% | 898,246 | 86% | 87% | 23,233 | 2.59% | 1,978 | 14,306 | 84% | 87% | 67% | 30,822,232 | 1,794,122 | 6% | 14,647,427 | 48% | 11,544,192 | 37% | 726,811 | 2% | 103,446 | 0% | 2,006,234 | 7% | 5,474 | 5,226 | 49% | 156 | 3% | 62 | 1% | 5,448 | 100% | 193 | 10,032 | 192 | 10,032 | 2,166 | 7,638 | 58 | 94% | 2,418 | 7,638 | 1,125 | 5,063 | 2,683 | 7,638 | 42 | 40 | 68% |
| pacBioSII-Uci-SmartSeq2_MpreCap_0+_F121-902Rep1 | ENCBS593PKA | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Mouse | F121-9 | SmartSeq2 | Maxima | MpreCap | 0+ | Total | True | 2 | 1 | False | LRGASP | 30 | NA | 528,882 | 1,876 | 2,089 | 17,177 | 94% | 425,092 | 86% | 88% | 15,125 | 3.56% | 2,038 | 11,339 | 88% | 87% | 72% | 23,564,994 | 1,080,841 | 5% | 12,025,708 | 51% | 9,095,909 | 39% | 369,604 | 2% | 74,543 | 0% | 918,389 | 4% | 3,164 | 6,375 | 51% | 89 | 3% | 35 | 1% | 3,150 | 100% | 193 | 7,042 | 193 | 7,042 | 2,332 | 6,066 | 31 | 89% | 2,152 | 6,066 | 1,120 | 5,247 | 2,399 | 6,066 | 25 | 50 | 71% |
| pacBioSII-Uci-SmartSeq2_MpreCap_0+_F121-902Rep2 | ENCBS593PKA | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Mouse | F121-9 | SmartSeq2 | Maxima | MpreCap | 0+ | Total | True | 2 | 2 | False | LRGASP | 30 | NA | 841,876 | 1,616 | 1,886 | 18,709 | 91% | 636,757 | 83% | 84% | 19,989 | 3.14% | 1,813 | 11,995 | 87% | 88% | 65% | 26,997,126 | 1,460,616 | 5% | 13,302,983 | 49% | 10,243,452 | 38% | 494,108 | 2% | 99,155 | 0% | 1,396,812 | 5% | 5,536 | 7,244 | 50% | 131 | 2% | 50 | 1% | 5,512 | 100% | 192 | 7,641 | 192 | 7,042 | 1,616 | 7,641 | 46 | 92% | 1,824 | 7,641 | 915 | 5,957 | 1,992 | 7,641 | 37 | 48 | 74% |
| pacBioSII-Uci-SmartSeq2_MpreCap_0+_F121-902Rep3 | ENCBS593PKA | 2021-05-01 | 2021-07-21 | Uci | pacBioSII | Mouse | F121-9 | SmartSeq2 | Maxima | MpreCap | 0+ | Total | True | 2 | 3 | False | LRGASP | 30 | NA | 1,100,177 | 2,419 | 2,556 | 20,468 | 96% | 922,298 | 87% | 91% | 23,438 | 2.54% | 2,483 | 15,551 | 89% | 87% | 72% | 33,191,717 | 1,884,800 | 6% | 15,554,662 | 47% | 12,583,151 | 38% | 778,060 | 2% | 121,488 | 0% | 2,269,556 | 7% | 4,328 | 4,099 | 50% | 153 | 4% | 63 | 1% | 4,306 | 99% | 193 | 7,705 | 193 | 7,128 | 2,418 | 7,705 | 56 | 89% | 2,335 | 7,307 | 1,221 | 5,615 | 2,448 | 7,307 | 44 | 42 | 70% |
| pacBioSII-Uci-SmartSeq2_MpreCap_0+_F121-903Rep1 | ENCBS474NOC | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Mouse | F121-9 | SmartSeq2 | Maxima | MpreCap | 0+ | Total | True | 3 | 1 | False | LRGASP | 30 | NA | 609,254 | 1,869 | 2,049 | 17,300 | 94% | 491,642 | 86% | 88% | 16,220 | 3.30% | 2,011 | 10,805 | 92% | 88% | 71% | 24,041,056 | 1,117,529 | 5% | 12,174,783 | 51% | 9,279,423 | 39% | 408,229 | 2% | 86,659 | 0% | 974,433 | 4% | 3,499 | 6,116 | 50% | 108 | 3% | 43 | 1% | 3,482 | 100% | 193 | 7,293 | 193 | 7,042 | 2,224 | 7,293 | 39 | 91% | 2,063 | 7,293 | 800 | 2,965 | 2,410 | 7,293 | 34 | 59 | 79% |
| pacBioSII-Uci-SmartSeq2_MpreCap_0+_F121-903Rep2 | ENCBS474NOC | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Mouse | F121-9 | SmartSeq2 | Maxima | MpreCap | 0+ | Total | True | 3 | 2 | False | LRGASP | 30 | NA | 739,415 | 1,949 | 2,140 | 23,622 | 94% | 592,273 | 85% | 88% | 18,463 | 3.12% | 2,075 | 12,020 | 91% | 87% | 69% | 26,978,496 | 1,405,277 | 5% | 13,378,395 | 50% | 10,381,464 | 38% | 474,706 | 2% | 84,751 | 0% | 1,253,903 | 5% | 4,270 | 6,163 | 51% | 118 | 3% | 46 | 1% | 4,249 | 100% | 193 | 8,506 | 192 | 8,506 | 2,464 | 7,285 | 42 | 91% | 2,423 | 7,285 | 912 | 5,399 | 2,571 | 7,285 | 36 | 52 | 78% |
| pacBioSII-Uci-SmartSeq2_MpreCap_0+_F121-903Rep3 | ENCBS474NOC | 2021-05-01 | 2021-07-20 | Uci | pacBioSII | Mouse | F121-9 | SmartSeq2 | Maxima | MpreCap | 0+ | Total | True | 3 | 3 | False | LRGASP | 30 | NA | 721,036 | 2,461 | 2,690 | 18,126 | 97% | 612,023 | 88% | 92% | 18,013 | 2.94% | 2,552 | 14,385 | 90% | 84% | 77% | 29,936,707 | 1,478,008 | 5% | 14,711,926 | 49% | 11,640,386 | 39% | 592,384 | 2% | 96,017 | 0% | 1,417,986 | 5% | 2,643 | 3,797 | 50% | 101 | 4% | 44 | 2% | 2,631 | 100% | 194 | 8,062 | 194 | 8,062 | 2,646 | 7,302 | 41 | 93% | 2,581 | 7,302 | 1,276 | 5,612 | 2,736 | 7,302 | 29 | 42 | 66% |
| ont-Crg-CapTrap_HpreCap_0+_Mix01Rep1 | ali-mortazavi-h1_es_1,ali-mortazavi-h1_de_1 | 2021-01-14 | 2021-03-03 | Crg | ONT | Human | Mix | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 1 | 1 | False | LRGASP | 10 | NA | 19,239,132 | 769 | 982 | 56,243 | 97% | 10,732,162 | 58% | 91% | 68,632 | 0.64% | 909 | 6,694 | 11% | 71% | 57% | 28,893,702 | 1,956,946 | 7% | 9,585,143 | 33% | 10,912,283 | 38% | 2,537,285 | 9% | 353,722 | 1% | 3,548,323 | 12% | 3,266 | 175 | 40% | 1,703 | 52% | 410 | 13% | 2,624 | 80% | 620 | 4,300 | 428 | 3,711 | 698 | 4,300 | 336 | 82% | 678 | 4,300 | 616 | 1,976 | 700 | 4,300 | 278 | 15 | 68% |
| ont-Crg-CapTrap_HpreCap_0+_Mix02Rep1 | ali-mortazavi-h1_es_2,ali-mortazavi-h1_de_2 | 2021-01-11 | 2021-03-02 | Crg | ONT | Human | Mix | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 2 | 1 | False | LRGASP | 10 | NA | 14,689,856 | 819 | 1,044 | 13,737 | 98% | 8,634,828 | 60% | 92% | 61,693 | 0.71% | 965 | 5,757 | 13% | 69% | 59% | 28,148,906 | 1,805,694 | 6% | 9,460,087 | 34% | 10,761,666 | 38% | 2,428,790 | 9% | 339,900 | 1% | 3,352,769 | 12% | 2,632 | 184 | 41% | 1,386 | 53% | 375 | 14% | 2,150 | 82% | 664 | 5,483 | 481 | 5,483 | 741 | 4,991 | 303 | 81% | 721 | 3,822 | 697 | 3,317 | 729 | 3,822 | 254 | 18 | 68% |
| ont-Crg-CapTrap_HpreCap_0+_Mix03Rep1 | ali-mortazavi-h1_es_3,ali-mortazavi-h1_de_3 | 2021-01-11 | 2021-03-03 | Crg | ONT | Human | Mix | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 3 | 1 | False | LRGASP | 10 | NA | 15,954,481 | 806 | 1,024 | 73,416 | 97% | 9,414,183 | 61% | 95% | 67,599 | 0.72% | 961 | 6,866 | 11% | 69% | 60% | 29,216,586 | 2,266,954 | 8% | 9,800,733 | 34% | 10,005,861 | 34% | 2,703,955 | 9% | 324,553 | 1% | 4,114,530 | 14% | 2,847 | 184 | 44% | 1,822 | 64% | 409 | 14% | 2,405 | 84% | 689 | 6,080 | 488 | 3,711 | 739 | 6,080 | 346 | 85% | 739 | 4,311 | 658 | 2,671 | 752 | 4,311 | 301 | 19 | 74% |
| ont-Ucsc-dRNA_HpreCap_0+_Mix01Rep1 | ali-mortazavi-h1_es_1,ali-mortazavi-h1_de_1 | 2021-01-14 | 2021-05-05 | Ucsc | ONT | Human | Mix | directRNA | None | HpreCap | 0+ | Total | True | 1 | 1 | False | LRGASP | 10 | NA | 2,200,320 | 978 | 1,319 | 58,716 | 98% | 1,169,877 | 54% | 97% | 16,926 | 1.45% | 1,626 | 10,098 | 22% | 71% | 64% | 20,120,417 | 344,497 | 2% | 9,812,769 | 49% | 8,867,459 | 44% | 604,588 | 3% | 59,902 | 0% | 431,202 | 2% | 210 | 97 | 47% | 188 | 90% | 28 | 13% | 166 | 79% | 899 | 6,859 | 1,521 | 6,859 | 890 | 6,260 | 21 | 75% | 906 | 2,994 | 381 | 1,172 | 914 | 2,994 | 23 | 11 | 82% |
| ont-Ucsc-dRNA_HpreCap_0+_Mix02Rep1 | ali-mortazavi-h1_es_2,ali-mortazavi-h1_de_2 | 2021-01-11 | 2021-05-05 | Ucsc | ONT | Human | Mix | directRNA | None | HpreCap | 0+ | Total | True | 2 | 1 | False | LRGASP | 10 | NA | 1,336,667 | 986 | 1,314 | 25,211 | 99% | 674,156 | 51% | 96% | 11,772 | 1.75% | 1,553 | 10,027 | 31% | 71% | 65% | 14,556,608 | 215,541 | 1% | 7,362,107 | 51% | 6,354,772 | 44% | 369,753 | 3% | 36,195 | 0% | 218,240 | 1% | 133 | 101 | 50% | 119 | 89% | 21 | 16% | 111 | 83% | 996 | 5,360 | 1,453 | 5,360 | 969 | 4,688 | 17 | 81% | 1,065 | 3,096 | 622 | 1,172 | 1,132 | 3,096 | 15 | 11 | 71% |
| ont-Ucsc-dRNA_HpreCap_0+_Mix03Rep1 | ali-mortazavi-h1_es_3,ali-mortazavi-h1_de_3 | 2021-01-11 | 2021-05-08 | Ucsc | ONT | Human | Mix | directRNA | None | HpreCap | 0+ | Total | True | 3 | 1 | False | LRGASP | 10 | NA | 432,616 | 935 | 1,276 | 18,465 | 98% | 204,467 | 48% | 97% | 4,974 | 2.43% | 1,346 | 8,406 | 49% | 63% | 54% | 6,291,634 | 67,350 | 1% | 3,290,908 | 52% | 2,739,426 | 44% | 130,915 | 2% | 9,346 | 0% | 53,689 | 1% | 61 | 144 | 43% | 53 | 87% | 9 | 15% | 50 | 82% | 916 | 5,360 | 1,255 | 5,360 | 902 | 3,966 | 7 | 78% | 1,502 | 3,094 | 314 | 318 | 1,784 | 3,094 | 7 | 17 | 78% |
| ont-Ucsc-PcrOnt_HpreCap_1+_Mix01Rep1 | ali-mortazavi-h1_es_1,ali-mortazavi-h1_de_1 | 2021-01-14 | 2021-05-05 | Ucsc | ONT | Human | Mix | PcrOnt | Maxima | HpreCap | 1+ | Total | True | 1 | 1 | False | LRGASP | 10 | NA | 20,418,801 | 760 | 921 | 105,505 | 82% | 9,386,083 | 56% | 88% | 78,908 | 0.84% | 914 | 10,916 | 7% | 71% | 62% | 34,166,624 | 2,377,086 | 7% | 12,100,660 | 35% | 13,074,424 | 38% | 2,554,929 | 7% | 314,133 | 1% | 3,745,392 | 11% | 5,427 | 324 | 37% | 2,569 | 47% | 415 | 8% | 4,334 | 80% | 497 | 5,819 | 317 | 5,819 | 643 | 5,573 | 338 | 81% | 683 | 5,573 | 488 | 2,332 | 743 | 5,573 | 271 | 16 | 65% |
| ont-Ucsc-PcrOnt_HpreCap_1+_Mix02Rep1 | ali-mortazavi-h1_es_2,ali-mortazavi-h1_de_2 | 2021-01-11 | 2021-05-06 | Ucsc | ONT | Human | Mix | PcrOnt | Maxima | HpreCap | 1+ | Total | True | 2 | 1 | False | LRGASP | 10 | NA | 14,645,499 | 768 | 940 | 350,382 | 84% | 6,204,891 | 50% | 88% | 57,438 | 0.93% | 908 | 10,925 | 9% | 72% | 62% | 27,388,614 | 1,648,226 | 6% | 10,309,163 | 38% | 10,788,735 | 39% | 1,976,735 | 7% | 259,219 | 1% | 2,406,536 | 9% | 3,378 | 274 | 39% | 1,778 | 53% | 339 | 10% | 2,716 | 80% | 525 | 5,335 | 312 | 5,335 | 657 | 5,318 | 289 | 85% | 663 | 3,695 | 460 | 2,438 | 698 | 3,695 | 245 | 20 | 72% |
| ont-Ucsc-PcrOnt_HpreCap_1+_Mix03Rep1 | ali-mortazavi-h1_es_3,ali-mortazavi-h1_de_3 | 2021-01-11 | 2021-05-05 | Ucsc | ONT | Human | Mix | PcrOnt | Maxima | HpreCap | 1+ | Total | True | 3 | 1 | False | LRGASP | 10 | NA | 17,863,295 | 742 | 890 | 106,378 | 79% | 7,636,417 | 54% | 88% | 67,409 | 0.88% | 919 | 10,916 | 9% | 71% | 61% | 30,961,711 | 2,052,313 | 7% | 11,164,966 | 36% | 12,077,642 | 39% | 2,299,015 | 7% | 266,184 | 1% | 3,101,591 | 10% | 4,315 | 307 | 39% | 2,085 | 48% | 373 | 9% | 3,456 | 80% | 509 | 7,527 | 312 | 5,745 | 661 | 7,527 | 308 | 83% | 670 | 4,212 | 483 | 2,533 | 711 | 4,212 | 245 | 17 | 66% |
| ont-Ucsc-R2C2_HpreCap_0+_Mix01Rep1 | ali-mortazavi-h1_es_1,ali-mortazavi-h1_de_1 | 2021-01-14 | 2021-06-01 | Ucsc | ONT | Human | Mix | R2C2 | SMART MMLV | HpreCap | 0+ | Total | True | 1 | 1 | False | LRGASP | 10 | NA | 1,002,303 | 1,474 | 1,646 | 14,549 | 100% | 918,327 | 92% | 95% | 19,642 | 2.14% | 1,754 | 8,873 | 54% | 69% | 85% | 20,970,679 | 444,041 | 2% | 10,456,853 | 50% | 7,832,281 | 37% | 1,029,277 | 5% | 84,494 | 0% | 1,123,733 | 5% | 363 | 363 | 44% | 157 | 43% | 77 | 21% | 316 | 87% | 1,022 | 4,571 | 928 | 4,571 | 1,074 | 4,553 | 62 | 81% | 989 | 4,050 | 1,081 | 4,050 | 816 | 3,826 | 35 | 35 | 45% |
| ont-Ucsc-R2C2_HpreCap_0+_Mix02Rep1 | ali-mortazavi-h1_es_2,ali-mortazavi-h1_de_2 | 2021-01-11 | 2021-06-01 | Ucsc | ONT | Human | Mix | R2C2 | SMART MMLV | HpreCap | 0+ | Total | True | 2 | 1 | False | LRGASP | 10 | NA | 987,755 | 1,468 | 1,641 | 17,414 | 100% | 905,875 | 92% | 95% | 19,709 | 2.18% | 1,743 | 8,568 | 55% | 69% | 84% | 21,196,790 | 484,428 | 2% | 10,632,102 | 50% | 7,890,825 | 37% | 1,007,191 | 5% | 79,656 | 0% | 1,102,588 | 5% | 371 | 376 | 46% | 168 | 45% | 87 | 23% | 326 | 88% | 1,016 | 6,645 | 883 | 5,479 | 1,052 | 6,645 | 75 | 86% | 916 | 6,645 | 916 | 2,667 | 902 | 6,645 | 41 | 42 | 47% |
| ont-Ucsc-R2C2_HpreCap_0+_Mix03Rep1 | ali-mortazavi-h1_es_3,ali-mortazavi-h1_de_3 | 2021-01-11 | 2021-06-01 | Ucsc | ONT | Human | Mix | R2C2 | SMART MMLV | HpreCap | 0+ | Total | True | 3 | 1 | False | LRGASP | 10 | NA | 1,268,610 | 1,480 | 1,654 | 13,115 | 100% | 1,168,889 | 92% | 95% | 23,768 | 2.03% | 1,760 | 8,638 | 55% | 71% | 83% | 24,375,394 | 596,562 | 2% | 11,640,489 | 48% | 8,973,339 | 37% | 1,331,533 | 5% | 107,098 | 0% | 1,726,373 | 7% | 497 | 392 | 44% | 207 | 42% | 103 | 21% | 446 | 90% | 954 | 4,873 | 810 | 4,873 | 1,015 | 3,832 | 89 | 86% | 971 | 3,108 | 1,093 | 2,996 | 856 | 3,108 | 49 | 39 | 48% |
| pacBioSII-Uci-CapTrap_HpreCap_0+_Mix01Rep1 | ali-mortazavi-h1_es_1,ali-mortazavi-h1_de_1 | 2021-05-01 | 2021-05-30 | Uci | pacBioSII | Human | Mix | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 1 | 1 | False | LRGASP | 30 | NA | 1,821,660 | 1,112 | 1,234 | 8,604 | 98% | 1,658,506 | 93% | 91% | 24,016 | 1.45% | 1,363 | 6,164 | 78% | 87% | 64% | 19,338,407 | 583,037 | 3% | 8,205,692 | 42% | 8,179,708 | 42% | 1,126,936 | 6% | 102,927 | 1% | 1,140,107 | 6% | 561 | 313 | 48% | 230 | 41% | 102 | 18% | 479 | 85% | 810 | 5,058 | 583 | 3,711 | 975 | 5,058 | 83 | 81% | 812 | 3,180 | 715 | 1,803 | 922 | 3,180 | 65 | 36 | 64% |
| pacBioSII-Uci-CapTrap_HpreCap_0+_Mix02Rep1 | ali-mortazavi-h1_es_2,ali-mortazavi-h1_de_2 | 2021-05-01 | 2021-05-30 | Uci | pacBioSII | Human | Mix | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 2 | 1 | False | LRGASP | 30 | NA | 1,814,575 | 1,153 | 1,279 | 7,811 | 98% | 1,655,164 | 93% | 92% | 24,601 | 1.49% | 1,407 | 6,512 | 84% | 87% | 66% | 19,991,024 | 609,582 | 3% | 8,501,452 | 43% | 8,304,605 | 42% | 1,207,111 | 6% | 104,178 | 1% | 1,264,096 | 6% | 542 | 304 | 49% | 236 | 44% | 103 | 19% | 456 | 84% | 843 | 5,524 | 546 | 5,524 | 998 | 4,706 | 87 | 84% | 899 | 3,181 | 776 | 2,846 | 946 | 3,181 | 63 | 35 | 61% |
| pacBioSII-Uci-CapTrap_HpreCap_0+_Mix03Rep1 | ali-mortazavi-h1_es_3,ali-mortazavi-h1_de_3 | 2021-05-01 | 2021-05-30 | Uci | pacBioSII | Human | Mix | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 3 | 1 | False | LRGASP | 30 | NA | 1,779,814 | 1,134 | 1,264 | 6,835 | 99% | 1,644,229 | 93% | 94% | 25,456 | 1.55% | 1,421 | 5,890 | 79% | 87% | 67% | 20,408,635 | 796,799 | 4% | 8,568,977 | 42% | 7,820,612 | 38% | 1,358,084 | 7% | 118,844 | 1% | 1,745,319 | 9% | 701 | 398 | 47% | 325 | 46% | 128 | 18% | 613 | 87% | 927 | 4,544 | 686 | 4,476 | 1,096 | 4,544 | 112 | 88% | 951 | 3,540 | 809 | 3,273 | 1,022 | 3,540 | 77 | 44 | 60% |
| pacBioSII-Uci-SmartSeq2_HpreCap_0+_Mix01Rep1 | ali-mortazavi-h1_es_1,ali-mortazavi-h1_de_1 | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Human | Mix | SmartSeq2 | Maxima | HpreCap | 0+ | Total | True | 1 | 1 | False | LRGASP | 30 | NA | 1,224,735 | 2,439 | 2,708 | 18,308 | 99% | 1,108,189 | 91% | 92% | 25,492 | 2.30% | 2,834 | 16,509 | 79% | 88% | 86% | 40,147,583 | 1,414,122 | 4% | 17,296,572 | 43% | 16,427,733 | 41% | 1,744,750 | 4% | 115,612 | 0% | 3,148,794 | 8% | 541 | 446 | 43% | 180 | 33% | 77 | 14% | 511 | 94% | 2,097 | 11,308 | 1,738 | 11,308 | 2,520 | 9,398 | 67 | 87% | 2,523 | 6,792 | 1,770 | 6,792 | 2,595 | 4,751 | 39 | 32 | 51% |
| pacBioSII-Uci-SmartSeq2_HpreCap_0+_Mix01Rep2 | ali-mortazavi-h1_es_1,ali-mortazavi-h1_de_1 | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Human | Mix | SmartSeq2 | Maxima | HpreCap | 0+ | Total | True | 1 | 2 | False | LRGASP | 30 | NA | 1,422,312 | 2,318 | 2,575 | 19,194 | 99% | 1,296,868 | 92% | 92% | 27,645 | 2.13% | 2,714 | 15,847 | 80% | 88% | 85% | 40,665,611 | 1,503,051 | 4% | 17,230,427 | 42% | 16,659,269 | 41% | 1,862,767 | 5% | 121,415 | 0% | 3,288,682 | 8% | 599 | 424 | 41% | 213 | 36% | 91 | 15% | 577 | 96% | 2,294 | 11,310 | 1,947 | 11,310 | 2,534 | 9,276 | 83 | 91% | 2,185 | 6,792 | 1,736 | 6,792 | 2,409 | 5,999 | 46 | 33 | 51% |
| pacBioSII-Uci-SmartSeq2_HpreCap_0+_Mix02Rep1 | ali-mortazavi-h1_es_2,ali-mortazavi-h1_de_2 | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Human | Mix | SmartSeq2 | Maxima | HpreCap | 0+ | Total | True | 2 | 1 | False | LRGASP | 30 | NA | 1,067,276 | 2,330 | 2,530 | 18,192 | 99% | 979,475 | 92% | 92% | 23,120 | 2.36% | 2,646 | 14,292 | 87% | 88% | 87% | 35,762,968 | 1,117,588 | 3% | 15,854,434 | 44% | 14,929,275 | 42% | 1,455,493 | 4% | 105,970 | 0% | 2,300,208 | 6% | 431 | 406 | 43% | 156 | 36% | 76 | 18% | 406 | 94% | 2,298 | 11,315 | 2,041 | 11,315 | 2,438 | 9,776 | 67 | 88% | 2,239 | 6,739 | 1,904 | 6,739 | 2,466 | 5,313 | 36 | 34 | 47% |
| pacBioSII-Uci-SmartSeq2_HpreCap_0+_Mix02Rep2 | ali-mortazavi-h1_es_2,ali-mortazavi-h1_de_2 | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Human | Mix | SmartSeq2 | Maxima | HpreCap | 0+ | Total | True | 2 | 2 | False | LRGASP | 30 | NA | 1,302,398 | 2,424 | 2,678 | 18,327 | 99% | 1,193,319 | 92% | 92% | 26,943 | 2.26% | 2,794 | 14,293 | 86% | 88% | 87% | 41,231,922 | 1,497,286 | 4% | 17,492,241 | 42% | 16,896,420 | 41% | 1,867,088 | 5% | 125,757 | 0% | 3,353,130 | 8% | 509 | 393 | 40% | 182 | 36% | 73 | 14% | 481 | 94% | 2,485 | 11,315 | 2,335 | 11,315 | 2,576 | 10,364 | 65 | 89% | 2,420 | 7,107 | 2,006 | 7,107 | 2,568 | 6,059 | 39 | 30 | 53% |
| pacBioSII-Uci-SmartSeq2_HpreCap_0+_Mix03Rep1 | ali-mortazavi-h1_es_3,ali-mortazavi-h1_de_3 | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Human | Mix | SmartSeq2 | Maxima | HpreCap | 0+ | Total | True | 3 | 1 | False | LRGASP | 30 | NA | 634,866 | 2,405 | 2,650 | 17,823 | 99% | 578,432 | 92% | 92% | 17,172 | 2.97% | 2,697 | 12,967 | 89% | 87% | 90% | 31,027,075 | 828,209 | 3% | 14,325,402 | 46% | 13,071,605 | 42% | 1,078,884 | 3% | 80,609 | 0% | 1,642,366 | 5% | 287 | 456 | 44% | 106 | 37% | 48 | 17% | 268 | 93% | 2,528 | 11,308 | 2,423 | 11,308 | 2,534 | 9,276 | 43 | 90% | 2,623 | 6,791 | 4,920 | 6,791 | 2,577 | 6,614 | 28 | 44 | 58% |
| pacBioSII-Uci-SmartSeq2_HpreCap_0+_Mix03Rep2 | ali-mortazavi-h1_es_3,ali-mortazavi-h1_de_3 | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Human | Mix | SmartSeq2 | Maxima | HpreCap | 0+ | Total | True | 3 | 2 | False | LRGASP | 30 | NA | 1,077,456 | 2,164 | 2,481 | 18,209 | 99% | 984,278 | 92% | 91% | 23,275 | 2.36% | 2,596 | 14,289 | 87% | 88% | 87% | 36,782,195 | 1,181,702 | 3% | 16,237,639 | 44% | 15,191,466 | 41% | 1,589,388 | 4% | 118,225 | 0% | 2,463,775 | 7% | 489 | 457 | 39% | 175 | 36% | 73 | 15% | 458 | 94% | 2,204 | 11,312 | 2,129 | 11,312 | 2,308 | 10,364 | 65 | 89% | 2,263 | 8,276 | 2,330 | 8,276 | 2,206 | 5,397 | 43 | 40 | 59% |
| ont-Crg-CapTrap_HpreCap_0+_WTC1101Rep1 | ENCBS944CBA | 2020-09-10 | 2021-03-01 | Crg | ONT | Human | WTC11 | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 1 | 1 | False | LRGASP | 10 | NA | 19,311,259 | 767 | 975 | 13,080 | 98% | 11,655,738 | 61% | 96% | 61,635 | 0.53% | 892 | 5,480 | 9% | 69% | 66% | 23,140,331 | 1,553,758 | 7% | 8,148,656 | 35% | 8,442,869 | 36% | 2,223,842 | 10% | 324,971 | 1% | 2,446,235 | 11% | 2,214 | 117 | 45% | 1,402 | 63% | 412 | 19% | 1,787 | 81% | 638 | 3,710 | 455 | 3,710 | 680 | 3,451 | 344 | 83% | 703 | 3,015 | 650 | 1,917 | 720 | 3,015 | 291 | 15 | 71% |
| ont-Crg-CapTrap_HpreCap_0+_WTC1102Rep1 | ENCBS593PKA | 2020-09-14 | 2021-03-01 | Crg | ONT | Human | WTC11 | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 2 | 1 | False | LRGASP | 10 | NA | 13,965,776 | 736 | 939 | 14,209 | 98% | 8,408,854 | 62% | 96% | 48,912 | 0.58% | 874 | 5,880 | 10% | 68% | 66% | 19,579,499 | 1,191,861 | 6% | 7,254,966 | 37% | 7,324,075 | 37% | 1,797,402 | 9% | 249,092 | 1% | 1,762,103 | 9% | 1,780 | 130 | 44% | 1,105 | 62% | 337 | 19% | 1,418 | 80% | 621 | 4,706 | 428 | 3,710 | 674 | 4,706 | 279 | 83% | 677 | 3,036 | 650 | 1,892 | 685 | 3,036 | 234 | 17 | 69% |
| ont-Crg-CapTrap_HpreCap_0+_WTC1103Rep1 | ENCBS474NOC | 2020-09-14 | 2021-03-02 | Crg | ONT | Human | WTC11 | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 3 | 1 | False | LRGASP | 10 | NA | 17,625,268 | 765 | 975 | 11,980 | 98% | 10,901,877 | 63% | 95% | 56,867 | 0.52% | 915 | 5,441 | 10% | 72% | 67% | 21,689,790 | 1,151,264 | 5% | 7,834,287 | 36% | 8,206,632 | 38% | 1,925,342 | 9% | 284,104 | 1% | 2,288,161 | 11% | 1,869 | 108 | 42% | 1,007 | 54% | 330 | 18% | 1,509 | 81% | 620 | 3,720 | 425 | 3,710 | 690 | 3,720 | 277 | 84% | 663 | 3,720 | 622 | 1,968 | 673 | 3,720 | 206 | 12 | 62% |
| ont-Ucsc-dRNA_HpreCap_0+_WTC1101Rep1 | ENCBS944CBA | 2020-09-10 | 2021-05-05 | Ucsc | ONT | Human | WTC11 | directRNA | None | HpreCap | 0+ | Total | True | 1 | 1 | False | LRGASP | 10 | NA | 758,495 | 871 | 1,150 | 14,299 | 99% | 359,805 | 48% | 96% | 7,054 | 1.96% | 1,307 | 7,219 | 46% | 68% | 58% | 8,044,589 | 93,821 | 1% | 4,168,074 | 52% | 3,470,499 | 43% | 210,015 | 3% | 21,439 | 0% | 80,741 | 1% | 88 | 118 | 50% | 78 | 89% | 11 | 12% | 71 | 81% | 750 | 4,560 | 1,086 | 4,560 | 740 | 3,238 | 9 | 82% | 668 | 2,890 | 371 | 961 | 698 | 2,890 | 8 | 11 | 73% |
| ont-Ucsc-dRNA_HpreCap_0+_WTC1102Rep1 | ENCBS593PKA | 2020-09-14 | 2021-05-11 | Ucsc | ONT | Human | WTC11 | directRNA | None | HpreCap | 0+ | Total | True | 2 | 1 | False | LRGASP | 10 | NA | 1,808,049 | 975 | 1,315 | 36,353 | 98% | 878,589 | 50% | 96% | 14,498 | 1.65% | 1,625 | 10,270 | 31% | 69% | 66% | 18,173,877 | 337,022 | 2% | 9,020,114 | 50% | 7,862,854 | 43% | 509,183 | 3% | 60,917 | 0% | 383,787 | 2% | 187 | 106 | 45% | 166 | 89% | 28 | 15% | 155 | 83% | 848 | 6,260 | 1,094 | 5,853 | 840 | 6,260 | 23 | 82% | 822 | 4,297 | 551 | 1,528 | 943 | 4,297 | 20 | 11 | 71% |
| ont-Ucsc-dRNA_HpreCap_0+_WTC1103Rep1 | ENCBS474NOC | 2020-09-14 | 2021-05-05 | Ucsc | ONT | Human | WTC11 | directRNA | None | HpreCap | 0+ | Total | True | 3 | 1 | False | LRGASP | 10 | NA | 421,886 | 828 | 1,069 | 13,578 | 99% | 209,237 | 50% | 96% | 4,674 | 2.23% | 1,192 | 6,332 | 57% | 66% | 59% | 5,091,597 | 38,566 | 1% | 2,755,297 | 54% | 2,141,443 | 42% | 116,878 | 2% | 10,029 | 0% | 29,384 | 1% | 34 | 82 | 56% | 31 | 91% | 5 | 15% | 25 | 74% | 758 | 2,504 | 1,026 | 1,284 | 730 | 2,504 | 3 | 60% | 698 | 1,026 | 675 | 1,026 | 698 | 888 | 3 | 7 | 60% |
| ont-Ucsc-PcrOnt_HpreCap_1+_WTC1101Rep1 | ENCBS944CBA | 2020-09-10 | 2021-05-05 | Ucsc | ONT | Human | WTC11 | PcrOnt | Maxima | HpreCap | 1+ | Total | True | 1 | 1 | False | LRGASP | 10 | NA | 10,939,622 | 741 | 892 | 102,027 | 84% | 4,910,935 | 54% | 86% | 40,820 | 0.83% | 851 | 12,322 | 11% | 72% | 61% | 19,223,136 | 1,035,886 | 5% | 7,398,970 | 38% | 7,972,191 | 41% | 1,321,277 | 7% | 192,574 | 1% | 1,302,238 | 7% | 1,969 | 215 | 43% | 971 | 49% | 194 | 10% | 1,567 | 80% | 554 | 5,745 | 305 | 5,745 | 681 | 4,661 | 160 | 82% | 682 | 3,754 | 386 | 1,537 | 728 | 3,754 | 144 | 16 | 74% |
| ont-Ucsc-PcrOnt_HpreCap_1+_WTC1102Rep1 | ENCBS593PKA | 2020-09-14 | 2021-05-06 | Ucsc | ONT | Human | WTC11 | PcrOnt | Maxima | HpreCap | 1+ | Total | True | 2 | 1 | False | LRGASP | 10 | NA | 16,644,242 | 739 | 885 | 92,287 | 83% | 7,811,310 | 57% | 83% | 64,683 | 0.83% | 847 | 10,409 | 8% | 72% | 55% | 29,038,461 | 2,107,815 | 7% | 9,893,276 | 34% | 11,524,569 | 40% | 2,096,816 | 7% | 265,287 | 1% | 3,150,698 | 11% | 4,827 | 349 | 37% | 2,011 | 42% | 333 | 7% | 3,859 | 80% | 486 | 6,583 | 309 | 5,840 | 671 | 6,583 | 278 | 83% | 696 | 4,507 | 394 | 2,440 | 734 | 4,507 | 235 | 17 | 71% |
| ont-Ucsc-PcrOnt_HpreCap_1+_WTC1103Rep1 | ENCBS474NOC | 2020-09-14 | 2021-05-06 | Ucsc | ONT | Human | WTC11 | PcrOnt | Maxima | HpreCap | 1+ | Total | True | 3 | 1 | False | LRGASP | 10 | NA | 23,610,671 | 798 | 990 | 154,772 | 85% | 11,992,484 | 59% | 86% | 90,865 | 0.76% | 988 | 12,321 | 7% | 72% | 60% | 38,266,102 | 2,935,555 | 8% | 12,310,157 | 32% | 14,364,599 | 38% | 2,873,644 | 8% | 330,372 | 1% | 5,451,775 | 14% | 6,724 | 334 | 37% | 2,638 | 39% | 378 | 6% | 5,518 | 82% | 467 | 6,214 | 315 | 6,214 | 686 | 5,387 | 309 | 82% | 713 | 6,040 | 534 | 6,040 | 765 | 4,510 | 231 | 11 | 61% |
| ont-Ucsc-R2C2_HpreCap_0+_WTC1101Rep1 | ENCBS944CBA | 2020-09-10 | 2021-06-01 | Ucsc | ONT | Human | WTC11 | R2C2 | SMART MMLV | HpreCap | 0+ | Total | True | 1 | 1 | False | LRGASP | 10 | NA | 1,098,954 | 1,317 | 1,480 | 11,146 | 100% | 998,794 | 91% | 94% | 20,253 | 2.03% | 1,617 | 10,368 | 54% | 71% | 82% | 21,051,532 | 533,958 | 3% | 10,549,115 | 50% | 7,696,884 | 37% | 1,061,981 | 5% | 123,444 | 1% | 1,086,150 | 5% | 487 | 444 | 47% | 198 | 41% | 101 | 21% | 430 | 88% | 902 | 5,372 | 885 | 5,372 | 912 | 3,869 | 86 | 85% | 935 | 3,717 | 1,015 | 2,562 | 834 | 3,717 | 56 | 51 | 55% |
| ont-Ucsc-R2C2_HpreCap_0+_WTC1102Rep1 | ENCBS593PKA | 2020-09-14 | 2021-06-01 | Ucsc | ONT | Human | WTC11 | R2C2 | SMART MMLV | HpreCap | 0+ | Total | True | 2 | 1 | False | LRGASP | 10 | NA | 1,008,873 | 1,293 | 1,462 | 10,514 | 100% | 912,864 | 91% | 93% | 19,060 | 2.09% | 1,579 | 8,217 | 51% | 71% | 82% | 19,874,759 | 487,700 | 2% | 10,077,853 | 51% | 7,320,904 | 37% | 901,249 | 5% | 101,901 | 1% | 985,152 | 5% | 488 | 485 | 43% | 202 | 41% | 89 | 18% | 433 | 89% | 887 | 5,197 | 867 | 5,197 | 906 | 3,689 | 70 | 79% | 890 | 3,032 | 1,018 | 2,562 | 850 | 3,032 | 45 | 45 | 51% |
| ont-Ucsc-R2C2_HpreCap_0+_WTC1103Rep1 | ENCBS474NOC | 2020-09-14 | 2021-06-01 | Ucsc | ONT | Human | WTC11 | R2C2 | SMART MMLV | HpreCap | 0+ | Total | True | 3 | 1 | False | LRGASP | 10 | NA | 1,177,885 | 1,359 | 1,516 | 23,265 | 100% | 1,085,350 | 92% | 94% | 20,999 | 1.93% | 1,636 | 8,217 | 54% | 71% | 83% | 21,002,538 | 446,954 | 2% | 10,447,800 | 50% | 7,837,927 | 37% | 1,024,299 | 5% | 87,749 | 0% | 1,157,809 | 6% | 441 | 375 | 41% | 162 | 37% | 79 | 18% | 394 | 89% | 925 | 4,571 | 825 | 4,571 | 996 | 3,624 | 68 | 86% | 1,047 | 3,624 | 1,174 | 2,560 | 874 | 3,624 | 38 | 32 | 48% |
| pacBioSII-Uci-CapTrap_HpreCap_0+_WTC1101Rep1 | ENCBS944CBA | 2021-05-01 | 2021-05-21 | Uci | pacBioSII | Human | WTC11 | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 1 | 1 | False | LRGASP | 30 | NA | 1,752,254 | 1,019 | 1,161 | 6,751 | 98% | 1,598,189 | 93% | 95% | 20,071 | 1.26% | 1,258 | 5,329 | 71% | 87% | 73% | 14,854,270 | 427,491 | 3% | 6,841,723 | 46% | 5,939,612 | 40% | 903,723 | 6% | 89,412 | 1% | 652,309 | 4% | 445 | 259 | 50% | 226 | 51% | 118 | 27% | 375 | 84% | 692 | 4,724 | 446 | 4,724 | 811 | 3,039 | 104 | 88% | 754 | 2,839 | 597 | 1,754 | 824 | 2,839 | 71 | 41 | 60% |
| pacBioSII-Uci-CapTrap_HpreCap_0+_WTC1102Rep1 | ENCBS593PKA | 2021-05-01 | 2021-05-21 | Uci | pacBioSII | Human | WTC11 | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 2 | 1 | False | LRGASP | 30 | NA | 2,061,266 | 873 | 1,026 | 7,611 | 97% | 1,856,388 | 93% | 94% | 20,731 | 1.12% | 1,085 | 5,695 | 66% | 87% | 70% | 13,959,523 | 415,267 | 3% | 6,309,627 | 45% | 5,621,529 | 40% | 901,239 | 6% | 84,656 | 1% | 627,205 | 4% | 560 | 279 | 51% | 268 | 48% | 137 | 24% | 459 | 82% | 655 | 3,710 | 337 | 3,710 | 746 | 2,903 | 114 | 83% | 692 | 2,903 | 584 | 1,752 | 733 | 2,903 | 86 | 43 | 63% |
| pacBioSII-Uci-CapTrap_HpreCap_0+_WTC1103Rep1 | ENCBS474NOC | 2021-05-01 | 2021-05-31 | Uci | pacBioSII | Human | WTC11 | CapTrap | PrimeScript II | HpreCap | 0+ | Total | True | 3 | 1 | False | LRGASP | 30 | NA | 2,453,678 | 1,027 | 1,169 | 6,681 | 98% | 2,254,474 | 94% | 95% | 24,457 | 1.08% | 1,298 | 5,409 | 63% | 87% | 73% | 16,610,526 | 425,700 | 3% | 7,338,042 | 44% | 6,724,317 | 40% | 1,090,318 | 7% | 92,951 | 1% | 939,198 | 6% | 448 | 186 | 49% | 204 | 46% | 99 | 22% | 382 | 85% | 734 | 3,710 | 432 | 3,710 | 888 | 3,421 | 84 | 85% | 794 | 3,122 | 748 | 2,131 | 926 | 3,122 | 54 | 22 | 55% |
| pacBioSII-Uci-SmartSeq2_HpreCap_0+_WTC1101Rep1 | ENCBS944CBA | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Human | WTC11 | SmartSeq2 | Maxima | HpreCap | 1+ | Total | True | 1 | 1 | False | LRGASP | 30 | NA | 495,763 | 2,369 | 2,644 | 20,704 | 99% | 455,786 | 92% | 92% | 13,786 | 3.02% | 2,630 | 11,308 | 92% | 85% | 91% | 25,973,283 | 633,505 | 2% | 12,457,557 | 48% | 11,093,987 | 43% | 734,318 | 3% | 51,873 | 0% | 1,002,043 | 4% | 184 | 373 | 47% | 72 | 39% | 29 | 16% | 175 | 95% | 2,888 | 11,308 | 3,712 | 11,308 | 2,698 | 9,166 | 28 | 97% | 2,676 | 6,737 | 5,176 | 6,737 | 2,592 | 4,506 | 17 | 34 | 59% |
| pacBioSII-Uci-SmartSeq2_HpreCap_0+_WTC1101Rep2 | ENCBS944CBA | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Human | WTC11 | SmartSeq2 | Maxima | HpreCap | 1+ | Total | True | 1 | 2 | False | LRGASP | 30 | NA | 1,298,880 | 2,766 | 3,048 | 19,928 | 99% | 1,194,927 | 93% | 91% | 27,508 | 2.30% | 3,038 | 16,504 | 91% | 88% | 87% | 43,327,747 | 1,667,296 | 4% | 18,226,746 | 42% | 17,674,631 | 41% | 1,891,660 | 4% | 164,534 | 0% | 3,702,880 | 9% | 406 | 315 | 44% | 176 | 43% | 62 | 15% | 381 | 94% | 2,974 | 12,822 | 3,336 | 12,822 | 2,892 | 11,531 | 55 | 89% | 2,622 | 12,016 | 4,207 | 12,016 | 2,586 | 5,624 | 40 | 31 | 65% |
| pacBioSII-Uci-SmartSeq2_HpreCap_0+_WTC1101Rep3 | ENCBS944CBA | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Human | WTC11 | SmartSeq2 | Maxima | HpreCap | 1+ | Total | True | 1 | 3 | False | LRGASP | 30 | NA | 676,492 | 2,181 | 2,468 | 21,694 | 99% | 617,583 | 92% | 91% | 16,568 | 2.68% | 2,537 | 11,314 | 87% | 88% | 89% | 28,278,048 | 680,907 | 2% | 13,304,167 | 47% | 12,049,636 | 43% | 916,682 | 3% | 71,712 | 0% | 1,254,944 | 4% | 248 | 369 | 46% | 86 | 35% | 24 | 10% | 231 | 93% | 2,182 | 11,314 | 1,735 | 11,314 | 2,462 | 6,666 | 22 | 92% | 2,760 | 6,040 | 4,488 | 6,040 | 2,612 | 4,506 | 15 | 22 | 62% |
| pacBioSII-Uci-SmartSeq2_HpreCap_0+_WTC1102Rep1 | ENCBS944CBA | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Human | WTC11 | SmartSeq2 | Maxima | HpreCap | 1+ | Total | True | 2 | 1 | False | LRGASP | 30 | NA | 306,455 | 1,973 | 2,244 | 14,735 | 99% | 279,674 | 92% | 90% | 10,235 | 3.66% | 2,294 | 11,308 | 92% | 87% | 91% | 19,296,043 | 373,353 | 2% | 9,922,596 | 51% | 8,116,057 | 42% | 409,565 | 2% | 28,235 | 0% | 446,237 | 2% | 144 | 474 | 51% | 71 | 49% | 24 | 17% | 133 | 92% | 2,161 | 11,308 | 2,224 | 11,308 | 1,910 | 11,122 | 21 | 88% | 1,728 | 6,740 | 1,624 | 6,740 | 1,728 | 4,309 | 13 | 43 | 54% |
| pacBioSII-Uci-SmartSeq2_HpreCap_0+_WTC1102Rep2 | ENCBS944CBA | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Human | WTC11 | SmartSeq2 | Maxima | HpreCap | 1+ | Total | True | 2 | 2 | False | LRGASP | 30 | NA | 667,161 | 1,700 | 1,900 | 16,047 | 98% | 600,023 | 91% | 88% | 15,684 | 2.61% | 2,100 | 8,832 | 79% | 87% | 86% | 23,422,653 | 561,522 | 2% | 11,413,489 | 49% | 9,833,427 | 42% | 711,400 | 3% | 65,209 | 0% | 837,606 | 4% | 366 | 557 | 47% | 136 | 37% | 60 | 16% | 339 | 93% | 1,090 | 8,233 | 847 | 8,233 | 1,347 | 6,578 | 53 | 88% | 1,100 | 6,743 | 1,220 | 6,743 | 1,084 | 4,506 | 39 | 59 | 65% |
| pacBioSII-Uci-SmartSeq2_HpreCap_0+_WTC1102Rep3 | ENCBS944CBA | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Human | WTC11 | SmartSeq2 | Maxima | HpreCap | 1+ | Total | True | 2 | 3 | False | LRGASP | 30 | NA | 695,166 | 1,655 | 1,866 | 14,631 | 98% | 621,277 | 91% | 88% | 16,108 | 2.59% | 2,069 | 9,007 | 80% | 88% | 85% | 23,957,097 | 560,464 | 2% | 11,688,883 | 49% | 10,064,736 | 42% | 738,416 | 3% | 65,810 | 0% | 838,788 | 4% | 423 | 620 | 46% | 123 | 29% | 52 | 12% | 390 | 92% | 835 | 6,740 | 375 | 6,719 | 1,203 | 6,740 | 46 | 88% | 1,318 | 6,040 | 1,426 | 6,040 | 1,147 | 4,506 | 27 | 40 | 52% |
| pacBioSII-Uci-SmartSeq2_HpreCap_0+_WTC1103Rep1 | ENCBS944CBA | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Human | WTC11 | SmartSeq2 | Maxima | HpreCap | 1+ | Total | True | 3 | 1 | False | LRGASP | 30 | NA | 727,372 | 2,128 | 2,385 | 15,358 | 99% | 665,658 | 92% | 91% | 17,728 | 2.66% | 2,498 | 14,293 | 92% | 88% | 88% | 29,521,301 | 811,371 | 3% | 13,851,544 | 47% | 12,479,647 | 42% | 993,644 | 3% | 72,470 | 0% | 1,312,625 | 4% | 295 | 409 | 49% | 125 | 42% | 53 | 18% | 275 | 93% | 2,065 | 11,308 | 1,946 | 11,308 | 2,198 | 9,276 | 46 | 87% | 1,606 | 6,740 | 1,621 | 6,740 | 1,590 | 4,506 | 32 | 44 | 60% |
| pacBioSII-Uci-SmartSeq2_HpreCap_0+_WTC1103Rep2 | ENCBS944CBA | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Human | WTC11 | SmartSeq2 | Maxima | HpreCap | 1+ | Total | True | 3 | 2 | False | LRGASP | 30 | NA | 813,624 | 2,091 | 2,334 | 15,998 | 99% | 743,200 | 92% | 91% | 18,717 | 2.52% | 2,474 | 11,708 | 87% | 87% | 88% | 29,960,069 | 883,342 | 3% | 13,891,386 | 46% | 12,637,068 | 42% | 1,032,879 | 3% | 87,534 | 0% | 1,427,860 | 5% | 330 | 410 | 48% | 128 | 39% | 58 | 18% | 305 | 92% | 1,910 | 11,308 | 1,523 | 11,308 | 2,214 | 11,010 | 55 | 95% | 1,542 | 6,740 | 1,482 | 6,740 | 1,730 | 6,233 | 33 | 41 | 57% |
| pacBioSII-Uci-SmartSeq2_HpreCap_0+_WTC1103Rep3 | ENCBS944CBA | 2021-05-01 | 2021-06-17 | Uci | pacBioSII | Human | WTC11 | SmartSeq2 | Maxima | HpreCap | 1+ | Total | True | 3 | 3 | False | LRGASP | 30 | NA | 1,422,895 | 2,327 | 2,667 | 20,832 | 100% | 1,310,939 | 93% | 92% | 27,283 | 2.08% | 2,750 | 16,509 | 84% | 87% | 87% | 40,036,098 | 1,440,026 | 4% | 17,043,965 | 43% | 16,361,990 | 41% | 1,783,079 | 4% | 114,763 | 0% | 3,292,275 | 8% | 459 | 324 | 43% | 161 | 35% | 61 | 13% | 441 | 96% | 2,551 | 13,382 | 2,306 | 11,314 | 2,629 | 13,382 | 58 | 95% | 2,713 | 6,792 | 2,359 | 6,792 | 2,891 | 6,720 | 30 | 21 | 49% |