Information for 8-CAGCAGCGGC (Motif 9)

A G T C G C T A A T C G T G A C T C G A C T A G T A G C T A C G T A C G A T G C
Reverse Opposite:
T A C G A T G C A T G C A T C G A G T C A G C T A C T G T A G C C G A T T C A G
p-value:1e-12
log p-value:-2.952e+01
Information Content per bp:1.702
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif11.18%
Number of Background Sequences with motif1524.8
Percentage of Background Sequences with motif3.37%
Average Position of motif in Targets116.1 +/- 48.8bp
Average Position of motif in Background103.5 +/- 68.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SeqBias: GCW-triplet

Match Rank:1
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-CAGCAGCGGC-
GCAGCAGCAGCA
A C G T A G T C G C T A A T C G T G A C T C G A C T A G T A G C T A C G T A C G A T G C A C G T
A C T G A G T C C G A T A C T G A G T C C G A T A C T G A G T C C G A T A C T G A G T C C G A T

ERF118/MA1671.1/Jaspar

Match Rank:2
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CAGCAGCGGC-
CGGCGGCGGNG
A G T C G C T A A T C G T G A C T C G A C T A G T A G C T A C G T A C G A T G C A C G T
G A T C C T A G T C A G G A T C C A T G T A C G G A T C C A T G T C A G G A T C C A T G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CAGCAGCGGC-
NNAGCAGCTGCT
A C G T A G T C G C T A A T C G T G A C T C G A C T A G T A G C T A C G T A C G A T G C A C G T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CAGCAGCGGC
CAGCAGCTGN
A G T C G C T A A T C G T G A C T C G A C T A G T A G C T A C G T A C G A T G C
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

MYOG/MA0500.2/Jaspar

Match Rank:5
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CAGCAGCGGC--
CAGCAGCTGCTG
A G T C G C T A A T C G T G A C T C G A C T A G T A G C T A C G T A C G A T G C A C G T A C G T
T A G C C T G A T C A G A G T C T C G A A C T G T G A C A G C T T C A G A G T C G A C T A T C G

Ascl2/MA0816.1/Jaspar

Match Rank:6
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CAGCAGCGGC-
-AGCAGCTGCT
A G T C G C T A A T C G T G A C T C G A C T A G T A G C T A C G T A C G A T G C A C G T
A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

NHLH1/MA0048.2/Jaspar

Match Rank:7
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CAGCAGCGGC-
-CGCAGCTGCG
A G T C G C T A A T C G T G A C T C G A C T A G T A G C T A C G T A C G A T G C A C G T
A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer

Match Rank:8
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CAGCAGCGGC-
SSRGCAGCTGCH
A C G T A G T C G C T A A T C G T G A C T C G A C T A G T A G C T A C G T A C G A T G C A C G T
T A C G T A C G C T A G T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A C T

PB0003.1_Ascl2_1/Jaspar

Match Rank:9
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CAGCAGCGGC-----
CTCAGCAGCTGCTACTG
A C G T A C G T A G T C G C T A A T C G T G A C T C G A C T A G T A G C T A C G T A C G A T G C A C G T A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

ZC3H10(Znf)/Homo_sapiens-RNCMPT00085-PBM/HughesRNA

Match Rank:10
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CAGCAGCGGC
--GCAGCGC-
A G T C G C T A A T C G T G A C T C G A C T A G T A G C T A C G T A C G A T G C
A C G T A C G T A T C G T A G C G T C A A C T G A G T C A C T G G T A C A C G T