Information for 8-TAGAAGAAGA (Motif 7)

A G C T T G C A T A C G C T G A C G T A C T A G C G T A C G T A A C T G G T C A
Reverse Opposite:
C A G T T G A C G C A T C G A T G A T C G C A T A G C T A T G C A C G T T C G A
p-value:1e-10
log p-value:-2.476e+01
Information Content per bp:1.708
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif12.97%
Number of Background Sequences with motif1655.6
Percentage of Background Sequences with motif3.63%
Average Position of motif in Targets96.2 +/- 53.2bp
Average Position of motif in Background102.1 +/- 67.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TRA2(RRM)/Drosophila_melanogaster-RNCMPT00078-PBM/HughesRNA

Match Rank:1
Score:0.86
Offset:2
Orientation:forward strand
Alignment:TAGAAGAAGA
--GAAGAAG-
A G C T T G C A T A C G C T G A C G T A C T A G C G T A C G T A A C T G G T C A
A C G T A C G T T C A G C G T A C T G A A T C G C G T A C G T A A T C G A C G T

PABPN1(RRM)/Homo_sapiens-RNCMPT00157-PBM/HughesRNA

Match Rank:2
Score:0.78
Offset:4
Orientation:forward strand
Alignment:TAGAAGAAGA-
----AGAAGAN
A G C T T G C A T A C G C T G A C G T A C T A G C G T A C G T A A C T G G T C A A C G T
A C G T A C G T A C G T A C G T C G T A C T A G C G T A C G T A T C A G C G T A A G T C

Unknown4/Arabidopsis-Promoters/Homer

Match Rank:3
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:TAGAAGAAGA--
--RAAGAMGAMG
A G C T T G C A T A C G C T G A C G T A C T A G C G T A C G T A A C T G G T C A A C G T A C G T
A C G T A C G T C T A G C T G A T G C A C T A G C G T A G T A C C T A G T G C A G T C A T A C G

SFL1/MA0377.1/Jaspar

Match Rank:4
Score:0.71
Offset:-7
Orientation:forward strand
Alignment:-------TAGAAGAAGA----
TAGAGAATAGAAGAAATAAAA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T G C A T A C G C T G A C G T A C T A G C G T A C G T A A C T G G T C A A C G T A C G T A C G T A C G T
G C A T G T C A T C A G G T C A C T A G G T C A C T G A G A C T T G C A C T A G G C T A C T G A A C T G T C G A G C T A G T C A G C A T C T G A C G T A C G T A G C T A

LIN28A(CSD,Znf)/Homo_sapiens-RNCMPT00036-PBM/HughesRNA

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TAGAAGAAGA
-NGGAGAA--
A G C T T G C A T A C G C T G A C G T A C T A G C G T A C G T A A C T G G T C A
A C G T G T A C A C T G A C T G C G T A A C T G C G T A C T G A A C G T A C G T

REF2(RRM)/Drosophila_melanogaster-RNCMPT00059-PBM/HughesRNA

Match Rank:6
Score:0.69
Offset:4
Orientation:forward strand
Alignment:TAGAAGAAGA-
----AGAAGGC
A G C T T G C A T A C G C T G A C G T A C T A G C G T A C G T A A C T G G T C A A C G T
A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A C T A G T C A G G T A C

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TAGAAGAAGA
-NGAAGC---
A G C T T G C A T A C G C T G A C G T A C T A G C G T A C G T A A C T G G T C A
A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T

SRSF2(RRM)/Homo_sapiens-RNCMPT00072-PBM/HughesRNA

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TAGAAGAAGA
-AGGAGANG-
A G C T T G C A T A C G C T G A C G T A C T A G C G T A C G T A A C T G G T C A
A C G T C G T A A C T G A C T G C G T A A C T G C G T A C T A G C T A G A C G T

KAN2(G2like)/colamp-KAN2-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TAGAAGAAGA-
---RAGAATAT
A G C T T G C A T A C G C T G A C G T A C T A G C G T A C G T A A C T G G T C A A C G T
A C G T A C G T A C G T C T G A T C G A A C T G G T C A C G T A A C G T C T G A G C A T

RLR1/RLR1_YPD/[](Harbison)/Yeast

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TAGAAGAAGA-
AAAGAAGAAAAT
A C G T A G C T T G C A T A C G C T G A C G T A C T A G C G T A C G T A A C T G G T C A A C G T
C T G A C G T A G C T A C T A G C G T A C T G A C T A G C G T A C G T A C G T A C G T A C A G T