Information for 12-GGTCTTCATC (Motif 11)

C T A G A T C G C A G T T A G C G A C T G A C T A T G C G C T A G A C T T A G C
Reverse Opposite:
A T C G C T G A C G A T T A C G C T G A C T G A A T C G G T C A A T G C A G T C
p-value:1e-22
log p-value:-5.120e+01
Information Content per bp:1.710
Number of Target Sequences with motif170.0
Percentage of Target Sequences with motif8.47%
Number of Background Sequences with motif1709.7
Percentage of Background Sequences with motif3.67%
Average Position of motif in Targets100.1 +/- 46.3bp
Average Position of motif in Background99.8 +/- 65.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGTCTTCATC-
AGGTCTCTAACC
A C G T C T A G A T C G C A G T T A G C G A C T G A C T A T G C G C T A G A C T T A G C A C G T
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

SNRNP70K(RRM)/Drosophila_melanogaster-RNCMPT00143-PBM/HughesRNA

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GGTCTTCATC
--TCTTGATC
C T A G A T C G C A G T T A G C G A C T G A C T A T G C G C T A G A C T T A G C
A C G T A C G T A C G T A G T C C G A T A C G T A C T G C G T A A C G T A G T C

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GGTCTTCATC
NRRGGGTCTT----
A C G T A C G T A C G T A C G T C T A G A T C G C A G T T A G C G A C T G A C T A T G C G C T A G A C T T A G C
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T

RBM47(RRM)/Gallus_gallus-RNCMPT00279-PBM/HughesRNA

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GGTCTTCATC
---NATCATC
C T A G A T C G C A G T T A G C G A C T G A C T A T G C G C T A G A C T T A G C
A C G T A C G T A C G T G C T A C G T A A C G T A T G C C G T A A C G T A G T C

Pp_0237(RRM)/Physcomitrella_patens-RNCMPT00237-PBM/HughesRNA

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGTCTTCATC
--ACTCCATC
C T A G A T C G C A G T T A G C G A C T G A C T A T G C G C T A G A C T T A G C
A C G T A C G T C G T A G A T C A C G T A G T C A G T C C G T A C G A T G T A C

TRA2(RRM)/Drosophila_melanogaster-RNCMPT00078-PBM/HughesRNA

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GGTCTTCATC
---CTTCTTC
C T A G A T C G C A G T T A G C G A C T G A C T A T G C G C T A G A C T T A G C
A C G T A C G T A C G T T A G C A C G T A C G T A T G C A G C T A C G T A G T C

SNRNP70(RRM)/Homo_sapiens-RNCMPT00070-PBM/HughesRNA

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GGTCTTCATC
---CTTGATC
C T A G A T C G C A G T T A G C G A C T G A C T A T G C G C T A G A C T T A G C
A C G T A C G T A C G T A G T C A C G T A C G T A C T G C G T A C G A T A G T C

HAP3(CCAATHAP3)/col-HAP3-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GGTCTTCATC-
---WTCCATCA
C T A G A T C G C A G T T A G C G A C T G A C T A T G C G C T A G A C T T A G C A C G T
A C G T A C G T A C G T G C A T A C G T A G T C A G T C C G T A A C G T A G T C C G T A

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GGTCTTCATC-
GARTGGTCATCGCCC
A C G T A C G T A C G T A C G T C T A G A T C G C A G T T A G C G A C T G A C T A T G C G C T A G A C T T A G C A C G T
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C

Rbm47(RRM)/Xenopus_tropicalis-RNCMPT00280-PBM/HughesRNA

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GGTCTTCATC
---NATCATC
C T A G A T C G C A G T T A G C G A C T G A C T A T G C G C T A G A C T T A G C
A C G T A C G T A C G T C T G A C G T A A C G T A T G C C G T A A C G T A G T C