Information for 21-GGCAAAGAATAA (Motif 21)

A C T G A C T G A G T C C G T A C G T A C G T A C T A G C G T A C G T A A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A C G T A C G T A G T C A C G T A C G T A C G T A C T G A G T C A G T C
p-value:1e-8
log p-value:-1.931e+01
Information Content per bp:1.961
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif5.80%
Number of Background Sequences with motif13.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets125.5 +/- 51.1bp
Average Position of motif in Background98.7 +/- 62.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2/dmmpmm(Papatsenko)/fly

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GGCAAAGAATAA
--CTAAAAATAA
A C T G A C T G A G T C C G T A C G T A C G T A C T A G C G T A C G T A A C G T C G T A C G T A
A C G T A C G T A G T C A G C T C G T A C G T A C G T A C G T A C G T A A C G T C G T A T C G A

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GGCAAAGAATAA---
AACAAACAACAAGAG
A C T G A C T G A G T C C G T A C G T A C G T A C T A G C G T A C G T A A C G T C G T A C G T A A C G T A C G T A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

KANADI1(Myb)/Seedling-KAN1-ChIP-Seq(GSE48081)/Homer

Match Rank:3
Score:0.66
Offset:4
Orientation:forward strand
Alignment:GGCAAAGAATAA--
----ARGAATAWWN
A C T G A C T G A G T C C G T A C G T A C G T A C T A G C G T A C G T A A C G T C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T C G A A C T G G T C A C G T A A C G T C G T A C G A T G C A T G A T C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGCAAAGAATAA-
-GCTAAAAATAGC
A C T G A C T G A G T C C G T A C G T A C G T A C T A G C G T A C G T A A C G T C G T A C G T A A C G T
A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

RALY(RRM)/Homo_sapiens-RNCMPT00159-PBM/HughesRNA

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GGCAAAGAATAA
--CAAAAAA---
A C T G A C T G A G T C C G T A C G T A C G T A C T A G C G T A C G T A A C G T C G T A C G T A
A C G T A C G T T G A C T G C A C G T A C G T A C G T A C G T A C G T A A C G T A C G T A C G T

KAN2/MA1383.1/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GGCAAAGAATAA------
---AAAGAATATTCTAAN
A C T G A C T G A G T C C G T A C G T A C G T A C T A G C G T A C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A C T G A C A T G C G T A C G T A A C G T C G T A C G A T C G A T G T A C A G C T C G T A C G T A C G A T

PFI1435w(RRM)/Plasmodium_falciparum-RNCMPT00202-PBM/HughesRNA

Match Rank:7
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GGCAAAGAATAA
--CAAAAAA---
A C T G A C T G A G T C C G T A C G T A C G T A C T A G C G T A C G T A A C G T C G T A C G T A
A C G T A C G T G T A C G T C A G T C A C G T A G T C A G T C A C G T A A C G T A C G T A C G T

VRN1(ABI3VP1)/col-VRN1-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GGCAAAGAATAA-
---AAAAAAAAAA
A C T G A C T G A G T C C G T A C G T A C G T A C T A G C G T A C G T A A C G T C G T A C G T A A C G T
A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A

SeqBias: polyA-repeat

Match Rank:9
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GGCAAAGAATAA-
---AAAAAAAAAA
A C T G A C T G A G T C C G T A C G T A C G T A C T A G C G T A C G T A A C G T C G T A C G T A A C G T
A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A

Smp_067420(RRM)/Schistosoma_mansoni-RNCMPT00232-PBM/HughesRNA

Match Rank:10
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GGCAAAGAATAA
---AAAAAAT--
A C T G A C T G A G T C C G T A C G T A C G T A C T A G C G T A C G T A A C G T C G T A C G T A
A C G T A C G T A C G T T C G A C G T A C G T A G T C A C G T A C G T A G C A T A C G T A C G T