Information for 19-CATGTCGGACGT (Motif 19)

A G T C C G T A A G C T A C T G A C G T G T A C A T C G A C T G C G T A A G T C C T A G A C G T
Reverse Opposite:
C G T A A G T C A C T G A C G T A G T C A T G C A C T G C G T A A G T C C T G A A C G T A C T G
p-value:1e-10
log p-value:-2.441e+01
Information Content per bp:1.885
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif3.33%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets108.6 +/- 1.4bp
Average Position of motif in Background8.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DRE1C/MA0985.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CATGTCGGACGT
-ATGTCGGC---
A G T C C G T A A G C T A C T G A C G T G T A C A T C G A C T G C G T A A G T C C T A G A C G T
A C G T C G T A A C G T A C T G A C G T A G T C A C T G A C T G A G C T A C G T A C G T A C G T

ARF3/MA1009.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CATGTCGGACGT
--TGTCGGAA--
A G T C C G T A A G C T A C T G A C G T G T A C A T C G A C T G C G T A A G T C C T A G A C G T
A C G T A C G T A C G T A C T G A G C T G A T C A C T G A T C G T C G A C T G A A C G T A C G T

DREB1A/MA0971.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CATGTCGGACGT
-ATGTCGGCAA-
A G T C C G T A A G C T A C T G A C G T G T A C A T C G A C T G C G T A A G T C C T A G A C G T
A C G T C G T A G A C T C T A G G A C T T G A C A C T G C T A G A G T C T C G A T C A G A C G T

DREB1E/MA0978.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CATGTCGGACGT
-ATGTCGGC---
A G T C C G T A A G C T A C T G A C G T G T A C A T C G A C T G C G T A A G T C C T A G A C G T
A C G T C T G A G A C T C T A G G A C T G A T C A C T G C T A G A G T C A C G T A C G T A C G T

CBF2/MA1217.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CATGTCGGACGT--
NNATGTCGGCNANNN
A C G T A G T C C G T A A G C T A C T G A C G T G T A C A T C G A C T G C G T A A G T C C T A G A C G T A C G T A C G T
G A C T A C T G C G T A G A C T A C T G A C G T A G T C A C T G C T A G A G T C T C G A C T G A G C T A C T A G C T G A

DREB1B/MA1669.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CATGTCGGACGT
NNNATGTCGGCNNN
A C G T A C G T A G T C C G T A A G C T A C T G A C G T G T A C A T C G A C T G C G T A A G T C C T A G A C G T
C G T A G A C T A C T G C G T A G A C T T C A G C G A T A T G C C A T G T C A G G A T C T C G A C T G A G C T A

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CATGTCGGACGT
GCACGTNC-----
A C G T A G T C C G T A A G C T A C T G A C G T G T A C A T C G A C T G C G T A A G T C C T A G A C G T
A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T A C G T A C G T A C G T

CBF4/MA1218.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CATGTCGGACGT
TGATGTCGGCGAA
A C G T A G T C C G T A A G C T A C T G A C G T G T A C A T C G A C T G C G T A A G T C C T A G A C G T
G A C T A C T G C G T A A G C T A C T G A C G T A G T C A C T G C T A G A G T C T C A G C T G A G T C A

DDF1(AP2EREBP)/col-DDF1-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CATGTCGGACGT
-ATGTCGGC---
A G T C C G T A A G C T A C T G A C G T G T A C A T C G A C T G C G T A A G T C C T A G A C G T
A C G T C T G A G A C T A C T G A C G T A G T C A C T G C T A G A G T C A C G T A C G T A C G T

CBF3(AP2EREBP)/colamp-CBF3-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CATGTCGGACGT
NNATGTCGGYNR-
A C G T A G T C C G T A A G C T A C T G A C G T G T A C A T C G A C T G C G T A A G T C C T A G A C G T
A G C T C A G T C G T A G C A T C A T G G C A T A G T C A C T G C T A G G A T C T C G A C T A G A C G T