Information for 17-CATATGATGAATGA (Motif 21)

A G T C G C T A A G C T C G T A C G A T C T A G C G T A C G A T A C T G C G T A C G T A A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C G T C A A C G T A C G T A G T C C G T A C G A T G A T C C G T A A C G T C T G A C A G T A C T G
p-value:1e-10
log p-value:-2.496e+01
Information Content per bp:1.881
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets71.4 +/- 44.4bp
Average Position of motif in Background185.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CATATGATGAATGA
NNTNTCATGAATGT
A G T C G C T A A G C T C G T A C G A T C T A G C G T A C G A T A C T G C G T A C G T A A C G T A C T G C G T A
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

TARDBP(RRM)/Homo_sapiens-RNCMPT00076-PBM/HughesRNA

Match Rank:2
Score:0.67
Offset:7
Orientation:forward strand
Alignment:CATATGATGAATGA-
-------NGAATGAN
A G T C G C T A A G C T C G T A C G A T C T A G C G T A C G A T A C T G C G T A C G T A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G C T G A C G T A A C G T A C T G C G T A C T A G

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CATATGATGAATGA-----
---ACTATGAATGAATGAT
A G T C G C T A A G C T C G T A C G A T C T A G C G T A C G A T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

WUS1(Homeobox)/colamp-WUS1-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.64
Offset:7
Orientation:reverse strand
Alignment:CATATGATGAATGA---
-------TGAATGAWTG
A G T C G C T A A G C T C G T A C G A T C T A G C G T A C G A T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T T C A G G C T A G C T A C G A T C T A G G T C A G C T A C G A T C A T G

ZNF24/MA1124.1/Jaspar

Match Rank:5
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CATATGATGAATGA---
----GAATGAATGAATG
A G T C G C T A A G C T C G T A C G A T C T A G C G T A C G A T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T C G A C T G A A G C T C T A G C T G A T C G A A G C T C T A G T C G A C T G A A G C T C T A G

AT/dmmpmm(Papatsenko)/fly

Match Rank:6
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:CATATGATGAATGA--
------ATGAACGAAT
A G T C G C T A A G C T C G T A C G A T C T A G C G T A C G A T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A C G T A G T A C A C T G C G T A C G T A C G A T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CATATGATGAATGA-
---ATGATKGATGRC
A G T C G C T A A G C T C G T A C G A T C T A G C G T A C G A T A C T G C G T A C G T A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

PB0170.1_Sox17_2/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CATATGATGAATGA----
-NTTNTATGAATGTGNNC
A G T C G C T A A G C T C G T A C G A T C T A G C G T A C G A T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

LIN-39(Homeobox)/cElegans.L3-LIN39-ChIP-Seq(modEncode)/Homer

Match Rank:9
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CATATGATGAATGA
---ATGATTRATG-
A G T C G C T A A G C T C G T A C G A T C T A G C G T A C G A T A C T G C G T A C G T A A C G T A C T G C G T A
A C G T A C G T A C G T C G T A C G A T C T A G G T C A G A C T C G A T C T A G C G T A A C G T C A T G A C G T

PH0150.1_Pou4f3/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CATATGATGAATGA----
--AGTTATTAATGAGGTC
A G T C G C T A A G C T C G T A C G A T C T A G C G T A C G A T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G C T A T C A G C A G T G C A T C G T A G A C T C G A T C G T A C G T A G A C T C A T G G T C A C T A G A C T G G A C T G A T C