Information for 20-GGCAAWCAAGTA (Motif 17)

A C T G A C T G A G T C C G T A C G T A C G A T A G T C C G T A C G T A A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C T G G T A C A G T C
p-value:1e-10
log p-value:-2.412e+01
Information Content per bp:1.944
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets97.1 +/- 68.4bp
Average Position of motif in Background91.1 +/- 57.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

slbo/dmmpmm(Down)/fly

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GGCAAWCAAGTA
-GCAATCAA---
A C T G A C T G A G T C C G T A C G T A C G A T A G T C C G T A C G T A A C T G A C G T C G T A
A C G T C T A G G A T C T G C A G C T A C G A T G T A C C T G A C T G A A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GGCAAWCAAGTA
-CCAATCAA---
A C T G A C T G A G T C C G T A C G T A C G A T A G T C C G T A C G T A A C T G A C G T C G T A
A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GGCAAWCAAGTA
--TAATCAATTA
A C T G A C T G A G T C C G T A C G T A C G A T A G T C C G T A C G T A A C T G A C G T C G T A
A C G T A C G T C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A

onecut/MA0235.1/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GGCAAWCAAGTA
--AAATCAA---
A C T G A C T G A G T C C G T A C G T A C G A T A G T C C G T A C G T A A C T G A C G T C G T A
A C G T A C G T G C T A C G T A C G T A A C G T A G T C C G T A C T G A A C G T A C G T A C G T

sna/dmmpmm(Bigfoot)/fly

Match Rank:5
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GGCAAWCAAGTA-
----ANCAGGTGG
A C T G A C T G A G T C C G T A C G T A C G A T A G T C C G T A C G T A A C T G A C G T C G T A A C G T
A C G T A C G T A C G T A C G T G T C A C T A G A G T C C T G A C T A G A C T G A C G T C A T G T C A G

Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGCAAWCAAGTA
RGCAATNAAA--
A C T G A C T G A G T C C G T A C G T A C G A T A G T C C G T A C G T A A C T G A C G T C G T A
C T A G T A C G G A T C G T C A T G C A A C G T T G C A G C T A T C G A T G C A A C G T A C G T

onecut/dmmpmm(Noyes_hd)/fly

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGCAAWCAAGTA
-CAAATCAANN-
A C T G A C T G A G T C C G T A C G T A C G A T A G T C C G T A C G T A A C T G A C G T C G T A
A C G T A G T C G C T A C G T A C G T A A C G T A G T C C G T A C T G A A C G T C T A G A C G T

SNRNP70(RRM)/Homo_sapiens-RNCMPT00070-PBM/HughesRNA

Match Rank:8
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GGCAAWCAAGTA
---GATCAAG--
A C T G A C T G A G T C C G T A C G T A C G A T A G T C C G T A C G T A A C T G A C G T C G T A
A C G T A C G T A C G T C T A G C G T A A C G T A G T C C G T A C G T A C T A G A C G T A C G T

FKH1/FKH1_YPD/53-FKH1,53-FKH2(Harbison)/Yeast

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGCAAWCAAGTA
-GTAAACAA---
A C T G A C T G A G T C C G T A C G T A C G A T A G T C C G T A C G T A A C T G A C G T C G T A
A C G T T C A G A G C T T G C A T G C A T C G A G A T C T G C A C T G A A C G T A C G T A C G T

PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGCAAWCAAGTA
-GCAAACAM---
A C T G A C T G A G T C C G T A C G T A C G A T A G T C C G T A C G T A A C T G A C G T C G T A
A C G T C T A G A G T C C G T A G T C A C G T A A G T C C G T A G T A C A C G T A C G T A C G T