Information for 1-TCAACGACCTTA (Motif 1)

A C G T A G T C C G T A C G T A A G T C A C T G C G T A A G T C A G T C A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C T G A C T G A C G T A G T C A C T G A C G T A C G T A C T G C G T A
p-value:1e-28
log p-value:-6.481e+01
Information Content per bp:1.530
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif2.91%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets134.6 +/- 52.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2::RXRA/MA1147.1/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----TCAACGACCTTA
GGGGTCAATGACCTN-
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C T G C G T A A G T C A G T C A C G T A C G T C G T A
T C A G T C A G C A T G C A T G A C G T A T G C T C G A G C T A A G C T T C A G T C G A G T A C G T A C A G C T A G T C A C G T

NR1H4::RXRA/MA1146.1/Jaspar

Match Rank:2
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TCAACGACCTTA
NAGGTCAATGACCTC-
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C T G C G T A A G T C A G T C A C G T A C G T C G T A
T C G A T C G A C A T G C A T G A C G T A G T C T C G A C G T A G A C T T C A G T G C A G T A C G A T C A G C T A G T C A C G T

NR2F1(var.3)/MA1538.1/Jaspar

Match Rank:3
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TCAACGACCTTA
AAGGTCANTGACCTT-
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C T G C G T A A G T C A G T C A C G T A C G T C G T A
C T G A C T G A A C T G T C A G A C G T A G T C T C G A T G C A A G C T T C A G T G C A G A T C T G A C G A C T G A C T A C G T

NR1H4/MA1110.1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TCAACGACCTTA
TCAATGACCTA-
A C G T A G T C C G T A C G T A A G T C A C T G C G T A A G T C A G T C A C G T A C G T C G T A
A C G T A G T C C G T A C T G A A G C T C T A G G T C A G T A C G T A C A G C T G C T A A C G T

NR2F6(var.3)/MA1539.1/Jaspar

Match Rank:5
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TCAACGACCTTA
AAGGTCANTGACCTT-
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C T G C G T A A G T C A G T C A C G T A C G T C G T A
C T G A T C G A C A T G C A T G A C G T A G T C T C G A T A C G G A C T T C A G T G C A G T A C G T A C A G C T G A C T A C G T

CG2950(KH)/Drosophila_melanogaster-RNCMPT00007-PBM/HughesRNA

Match Rank:6
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TCAACGACCTTA
-CAACGAN----
A C G T A G T C C G T A C G T A A G T C A C T G C G T A A G T C A G T C A C G T A C G T C G T A
A C G T A G T C C T G A C G T A A G T C A C T G C G T A T G C A A C G T A C G T A C G T A C G T

MYB30(MYB)/colamp-MYB30-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TCAACGACCTTA
CCAACTACCT--
A C G T A G T C C G T A C G T A A G T C A C T G C G T A A G T C A G T C A C G T A C G T C G T A
G A T C G A T C C G T A G T C A G A T C G A C T C T G A G T A C G A T C G C A T A C G T A C G T

MYB94(MYB)/col-MYB94-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TCAACGACCTTA
TMCCAACYACCW--
A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C T G C G T A A G T C A G T C A C G T A C G T C G T A
A G C T G T A C G A T C G A T C C G T A G T C A A G T C G A C T C G T A G T A C G A T C G C A T A C G T A C G T

DREB2(AP2EREBP)/col-DREB2-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TCAACGACCTTA
TMACCGACATWA
A C G T A G T C C G T A C G T A A G T C A C T G C G T A A G T C A G T C A C G T A C G T C G T A
G C A T T G A C C T G A A G T C A G T C A C T G G T C A A G T C G C T A G A C T G C T A C T G A

MYB96(MYB)/colamp-MYB96-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TCAACGACCTTA
CCAACYACCW--
A C G T A G T C C G T A C G T A A G T C A C T G C G T A A G T C A G T C A C G T A C G T C G T A
G A T C A G T C C G T A G T C A A G T C G A C T C T G A G T A C G A T C G C T A A C G T A C G T