p-value: | 1e-30 |
log p-value: | -7.091e+01 |
Information Content per bp: | 1.891 |
Number of Target Sequences with motif | 18.0 |
Percentage of Target Sequences with motif | 1.05% |
Number of Background Sequences with motif | 4.8 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 115.0 +/- 21.9bp |
Average Position of motif in Background | 60.9 +/- 47.8bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Tv_0259(RRM)/Trichomonas_vaginalis-RNCMPT00259-PBM/HughesRNA
Match Rank: | 1 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ATCATGGCCACG ACCATGN----- |
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pho/dmmpmm(Pollard)/fly
Match Rank: | 2 |
Score: | 0.62 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---ATCATGGCCACG GCCGTTATGGCTTC- |
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SKN7/MA0381.1/Jaspar
Match Rank: | 3 |
Score: | 0.62 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | ATCATGGCCACG ---NTGGCC--- |
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pho/MA1460.1/Jaspar
Match Rank: | 4 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | ATCATGGCCACG -AAATGGCCGCC |
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SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer
Match Rank: | 5 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | ATCATGGCCACG --CAAGGHCANV |
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Plagl1/MA1615.1/Jaspar
Match Rank: | 6 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | ATCATGGCCACG--- --NNTGGCCCCAGNN |
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RFX3/MA0798.2/Jaspar
Match Rank: | 7 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -ATCATGGCCACG- TNCCATAGCAACNN |
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Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer
Match Rank: | 8 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ATCATGGCCACG NTCAAGGTCA-- |
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PB0055.1_Rfx4_1/Jaspar
Match Rank: | 9 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -ATCATGGCCACG-- TACCATAGCAACGGT |
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NR5A1/MA1540.1/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ATCATGGCCACG GTCAAGGTCAC- |
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