Information for 1-GGTTTATT (Motif 1)

C T A G C A T G A C G T A G C T C A G T C G T A A C G T A G C T
Reverse Opposite:
C T G A C G T A A C G T G T C A C T G A T G C A G T A C G A T C
p-value:1e-14
log p-value:-3.351e+01
Information Content per bp:1.848
Number of Target Sequences with motif94.0
Percentage of Target Sequences with motif39.17%
Number of Background Sequences with motif8209.3
Percentage of Background Sequences with motif17.58%
Average Position of motif in Targets120.4 +/- 50.1bp
Average Position of motif in Background100.8 +/- 62.0bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

zen/dmmpmm(Bigfoot)/fly

Match Rank:1
Score:0.92
Offset:2
Orientation:reverse strand
Alignment:GGTTTATT
--TTTATT
C T A G C A T G A C G T A G C T C A G T C G T A A C G T A G C T
A C G T A C G T A C G T A C G T C G A T C G T A C G A T A C G T

PABPC1(?)/MEL-PABC1-CLIP-Seq(GSE69755)/Homer

Match Rank:2
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-GGTTTATT-
NNCTTTATTD
A C G T C T A G C A T G A C G T A G C T C A G T C G T A A C G T A G C T A C G T
T G C A G C T A T A G C G A C T C A G T G C A T G C T A G C A T C G A T C T A G

cad/dmmpmm(Noyes)/fly

Match Rank:3
Score:0.88
Offset:2
Orientation:reverse strand
Alignment:GGTTTATT--
--TTTATTAN
C T A G C A T G A C G T A G C T C A G T C G T A A C G T A G C T A C G T A C G T
A C G T A C G T G A C T C G A T C G A T C G T A A C G T C A G T C T G A A T C G

KHDRBS3(KH)/Homo_sapiens-RNCMPT00034-PBM/HughesRNA

Match Rank:4
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:GGTTTATT
NGTTTATC
C T A G C A T G A C G T A G C T C A G T C G T A A C G T A G C T
A T G C A T C G A C G T A C G T A C G T C G T A A C G T A G T C

KHDRBS2(KH)/Homo_sapiens-RNCMPT00185-PBM/HughesRNA

Match Rank:5
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:GGTTTATT
-TTTTATC
C T A G C A T G A C G T A G C T C A G T C G T A A C G T A G C T
A C G T C A G T C G A T A C G T C G A T C T G A A C G T A G T C

HOXD13/MA0909.2/Jaspar

Match Rank:6
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:GGTTTATT---
GTTTTATTGGG
C T A G C A T G A C G T A G C T C A G T C G T A A C G T A G C T A C G T A C G T A C G T
A C T G A C G T A C G T A G C T A C G T C G T A A G C T A C G T A C T G A T C G A T C G

Antp/dmmpmm(Bigfoot)/fly

Match Rank:7
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:GGTTTATT
--ATTATT
C T A G C A T G A C G T A G C T C A G T C G T A A C G T A G C T
A C G T A C G T C G T A A C G T A G C T C G T A A C G T A C G T

CDX2/MA0465.2/Jaspar

Match Rank:8
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GGTTTATT----
NTTTTATTGCNN
C T A G C A T G A C G T A G C T C A G T C G T A A C G T A G C T A C G T A C G T A C G T A C G T
C G A T G C A T C G A T G C A T G C A T T C G A G A C T C A G T C T A G G A T C G C A T G A C T

HOXA13/MA0650.2/Jaspar

Match Rank:9
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GGTTTATT---
GTTTTATTGGN
C T A G C A T G A C G T A G C T C A G T C G T A A C G T A G C T A C G T A C G T A C G T
C A T G C A G T A C G T A G C T A G C T C G T A A C G T A C G T C T A G A T C G A C T G

Tv_0226(RRM)/Trichomonas_vaginalis-RNCMPT00226-PBM/HughesRNA

Match Rank:10
Score:0.82
Offset:2
Orientation:reverse strand
Alignment:GGTTTATT--
--NTTATTGN
C T A G C A T G A C G T A G C T C A G T C G T A A C G T A G C T A C G T A C G T
A C G T A C G T G T A C A C G T A C G T C G T A A C G T A C G T C T A G A C G T