Information for 3-TGATGARGACAC (Motif 3)

A C G T A C T G G T C A A C G T A C T G C G T A C T A G C T A G C G T A A T G C G T C A A G T C
Reverse Opposite:
A C T G A C G T A T C G A C G T A G T C A G T C C G A T A G T C G T C A A C G T G T A C C G T A
p-value:1e-15
log p-value:-3.645e+01
Information Content per bp:1.826
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif7.50%
Number of Background Sequences with motif30.6
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets160.6 +/- 15.4bp
Average Position of motif in Background92.6 +/- 53.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZML2(C2C2gata)/col-ZML2-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGATGARGACAC
GATGATGATG----
A C G T A C G T A C G T A C T G G T C A A C G T A C T G C G T A C T A G C T A G C G T A A T G C G T C A A G T C
C T A G C T G A C G A T T C A G C T G A C A G T A T C G C T G A C A G T A T C G A C G T A C G T A C G T A C G T

AGL42/MA1201.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGATGARGACAC
GATGATG-------
A C G T A C G T A C G T A C T G G T C A A C G T A C T G C G T A C T A G C T A G C G T A A T G C G T C A A G T C
C T A G C G T A A C G T A C T G C T G A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RBM47(RRM)/Gallus_gallus-RNCMPT00279-PBM/HughesRNA

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGATGARGACAC
-GATGATN----
A C G T A C T G G T C A A C G T A C T G C G T A C T A G C T A G C G T A A T G C G T C A A G T C
A C G T A C T G C G T A A C G T A T C G C G T A C G A T C G A T A C G T A C G T A C G T A C G T

TGA10/MA1346.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGATGARGACAC-
GATGATGACGTCACT
A C G T A C G T A C G T A C T G G T C A A C G T A C T G C G T A C T A G C T A G C G T A A T G C G T C A A G T C A C G T
C T A G C G T A G A C T T A C G T G C A A C G T C A T G C T G A A G T C C T A G G C A T T A G C C T G A A G T C G A C T

HAP3(CCAATHAP3)/col-HAP3-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGATGARGACAC
TGATGGAW----
A C G T A C T G G T C A A C G T A C T G C G T A C T A G C T A G C G T A A T G C G T C A A G T C
A C G T A C T G C G T A A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C G T A C G T

skn-1/MA0547.1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TGATGARGACAC
AAAATGATGACAATT-
A C G T A C G T A C G T A C G T A C G T A C T G G T C A A C G T A C T G C G T A C T A G C T A G C G T A A T G C G T C A A G T C
T C G A C T G A C T G A C G T A G A C T A T C G G T C A C G A T A C T G C G T A G A T C C G T A C G T A C G A T C G A T A C G T

TGA4/MA1335.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGATGARGACAC
TGATGACGTCA-
A C G T A C T G G T C A A C G T A C T G C G T A C T A G C T A G C G T A A T G C G T C A A G T C
G A C T T C A G T G C A A C G T A C T G C T G A A G T C C T A G G C A T T A G C C T G A A C G T

AARE(HLH)/mES-cMyc-ChIP-Seq/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGATGARGACAC
TGATGCAATC--
A C G T A C T G G T C A A C G T A C T G C G T A C T A G C T A G C G T A A T G C G T C A A G T C
A C G T T A C G C G T A A G C T A C T G G T A C C G T A G T C A A G C T G A T C A C G T A C G T

TGA3/MA1336.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGATGARGACAC-
ATGATGACGTCATN
A C G T A C G T A C T G G T C A A C G T A C T G C G T A C T A G C T A G C G T A A T G C G T C A A G T C A C G T
G C T A G C A T T C A G T G C A G C A T A C T G C T G A A G T C C T A G A C G T T G A C C G T A A G C T G A T C

Rbm47(RRM)/Xenopus_tropicalis-RNCMPT00280-PBM/HughesRNA

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGATGARGACAC
-GATGATN----
A C G T A C T G G T C A A C G T A C T G C G T A C T A G C T A G C G T A A T G C G T C A A G T C
A C G T A C T G C G T A A C G T A T C G C G T A C G A T G A C T A C G T A C G T A C G T A C G T