p-value: | 1e-2 |
log p-value: | -6.176e+00 |
Information Content per bp: | 1.938 |
Number of Target Sequences with motif | 21.0 |
Percentage of Target Sequences with motif | 27.63% |
Number of Background Sequences with motif | 6736.5 |
Percentage of Background Sequences with motif | 14.45% |
Average Position of motif in Targets | 119.9 +/- 45.2bp |
Average Position of motif in Background | 99.8 +/- 61.9bp |
Strand Bias (log2 ratio + to - strand density) | 0.5 |
Multiplicity (# of sites on avg that occur together) | 1.48 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Tv_0259(RRM)/Trichomonas_vaginalis-RNCMPT00259-PBM/HughesRNA
Match Rank: | 1 |
Score: | 0.82 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CATGGC NCATGGT |
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YY2/MA0748.2/Jaspar
Match Rank: | 2 |
Score: | 0.76 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CATGGC---- AGATGGCGGCG |
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pho/MA1460.1/Jaspar
Match Rank: | 3 |
Score: | 0.75 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CATGGC---- AAATGGCCGCC |
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pho/dmmpmm(Bergman)/fly
Match Rank: | 4 |
Score: | 0.75 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CATGGC AATGGC |
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LEC2/MA0581.1/Jaspar
Match Rank: | 5 |
Score: | 0.74 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----CATGGC ATGTGCATGNN |
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RIM101/MA0368.1/Jaspar
Match Rank: | 6 |
Score: | 0.74 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CATGGC- CTTGGCG |
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EIF-2ALPHA(S1)/Drosophila_melanogaster-RNCMPT00273-PBM/HughesRNA
Match Rank: | 7 |
Score: | 0.73 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CATGGC AGCATGC- |
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AtLEC2(ABI3/VP1)/Arabidopsis thaliana/AthaMap
Match Rank: | 8 |
Score: | 0.73 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CATGGC TTTGCATGGA |
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A2BP1(RRM)/Drosophila_melanogaster-RNCMPT00123-PBM/HughesRNA
Match Rank: | 9 |
Score: | 0.72 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CATGGC NTGCATGC- |
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MXI1/MA1108.2/Jaspar
Match Rank: | 10 |
Score: | 0.71 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CATGGC GACACATGGC |
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