Information for 2-CTTCTKCAGG (Motif 2)

A T G C G C A T A C G T A G T C G A C T A C T G A T G C C G T A C A T G A T C G
Reverse Opposite:
T A G C G T A C G C A T A T C G T G A C C T G A T C A G T G C A C G T A T A C G
p-value:1e-58
log p-value:-1.337e+02
Information Content per bp:1.604
Number of Target Sequences with motif942.0
Percentage of Target Sequences with motif46.91%
Number of Background Sequences with motif13864.4
Percentage of Background Sequences with motif29.76%
Average Position of motif in Targets99.1 +/- 47.2bp
Average Position of motif in Background99.7 +/- 68.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.46
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOK2/MA0385.1/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CTTCTKCAGG--
-ACCTGCAGGCA
A T G C G C A T A C G T A G T C G A C T A C T G A T G C C G T A C A T G A T C G A C G T A C G T
A C G T G T C A A G T C T G A C C A G T C T A G G A T C C G T A A C T G T A C G T G A C C G T A

PHD1/MA0355.1/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CTTCTKCAGG-
-NGNTGCAGGN
A T G C G C A T A C G T A G T C G A C T A C T G A T G C C G T A C A T G A T C G A C G T
A C G T A C G T A C T G T G A C A G C T C T A G A G T C C T G A A C T G A T C G A C G T

SOK2/SOK2_BUT14/4-SUT1(Harbison)/Yeast

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTTCTKCAGG
TNCCTGCA--
A T G C G C A T A C G T A G T C G A C T A C T G A T G C C G T A C A T G A T C G
A G C T A C G T A T G C T G A C A G C T A C T G G A T C T C G A A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CTTCTKCAGG
--GCTTCC--
A T G C G C A T A C G T A G T C G A C T A C T G A T G C C G T A C A T G A T C G
A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T

SeqBias: GCW-triplet

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTTCTKCAGG-
GCAGCAGCAGCA
A C G T A T G C G C A T A C G T A G T C G A C T A C T G A T G C C G T A C A T G A T C G A C G T
A C T G A G T C C G A T A C T G A G T C C G A T A C T G A G T C C G A T A C T G A G T C C G A T

PHD1/PHD1_BUT90/8-SUT1(Harbison)/Yeast

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CTTCTKCAGG
--GCCGCAGG
A T G C G C A T A C G T A G T C G A C T A C T G A T G C C G T A C A T G A T C G
A C G T A C G T A T C G T A G C A G T C A T C G T G A C T C G A A T C G T A C G

TRA2(RRM)/Drosophila_melanogaster-RNCMPT00078-PBM/HughesRNA

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTTCTKCAGG
CTTCTTC---
A T G C G C A T A C G T A G T C G A C T A C T G A T G C C G T A C A T G A T C G
T A G C A C G T A C G T A T G C A G C T A C G T A G T C A C G T A C G T A C G T

ZBTB26/MA1579.1/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CTTCTKCAGG-
NNNNTTTCTGGAGNN
A C G T A C G T A C G T A C G T A T G C G C A T A C G T A G T C G A C T A C T G A T G C C G T A C A T G A T C G A C G T
C T G A C A G T A G T C A C G T A C G T A G C T C A G T G A T C G A C T T C A G A C T G C G T A C T A G G C A T G T C A

TFAP2A/MA0003.4/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTTCTKCAGG---
ATTGCCTCAGGCCA
A C G T A T G C G C A T A C G T A G T C G A C T A C T G A T G C C G T A C A T G A T C G A C G T A C G T A C G T
T G C A A G C T C A G T A T C G T G A C A G T C A G C T T A G C T C G A T A C G A T C G T A G C G T A C T G C A

WIP5(C2H2)/colamp-WIP5-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTTCTKCAGG-
TDTTCTCMAGGT
A C G T A T G C G C A T A C G T A G T C G A C T A C T G A T G C C G T A C A T G A T C G A C G T
G A C T C A G T G C A T C G A T T G A C A C G T A T G C G T A C C T G A A C T G A C T G A G C T