Information for 4-CATCGT (Motif 15)

A G T C G T C A A C G T A G T C A T C G C G A T
Reverse Opposite:
G C T A T A G C A C T G T G C A C A G T C T A G
p-value:1e-12
log p-value:-2.832e+01
Information Content per bp:1.735
Number of Target Sequences with motif484.0
Percentage of Target Sequences with motif57.28%
Number of Background Sequences with motif21427.2
Percentage of Background Sequences with motif44.98%
Average Position of motif in Targets104.1 +/- 50.5bp
Average Position of motif in Background99.9 +/- 65.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.39
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RBP1-LIKE(RRM)/Drosophila_melanogaster-RNCMPT00127-PBM/HughesRNA

Match Rank:1
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CATCGT
ATCAACG-
A C G T A C G T A G T C G T C A A C G T A G T C A T C G C G A T
C G T A C G A T A G T C C G T A C G T A A G T C C T A G A C G T

AGL42/MA1201.1/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:forward strand
Alignment:CATCGT-
CATCATC
A G T C G T C A A C G T A G T C A T C G C G A T A C G T
A G T C C G T A A G C T A G T C C G T A A C G T G A T C

Tb_0216(RRM)/Trypanosoma_brucei-RNCMPT00216-PBM/HughesRNA

Match Rank:3
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CATCGT-
CATTGTN
A G T C G T C A A C G T A G T C A T C G C G A T A C G T
A G T C C G T A A C G T C G A T A C T G A C G T C G T A

RSF1(RRM)/Drosophila_melanogaster-RNCMPT00061-PBM/HughesRNA

Match Rank:4
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CATCGT
TCGTCGT
A C G T A G T C G T C A A C G T A G T C A T C G C G A T
A G C T A G T C A C T G A C G T A G T C A C T G A C G T

DOT6/MA0351.1/Jaspar

Match Rank:5
Score:0.72
Offset:-10
Orientation:forward strand
Alignment:----------CATCGT-----
TTCTGCACCTCATCGCATCCT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C G T A G T C A T C G C G A T A C G T A C G T A C G T A C G T A C G T
C G A T A C G T A G T C A C G T C A T G A G T C C G T A A T G C T A G C A C G T A T G C C G T A C A G T A G T C C A T G T G A C T G C A G A C T A T G C A G T C C A G T

RBM47(RRM)/Gallus_gallus-RNCMPT00279-PBM/HughesRNA

Match Rank:6
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CATCGT
NATCATC--
A C G T A C G T A C G T A G T C G T C A A C G T A G T C A T C G C G A T
G C T A C G T A A C G T A T G C C G T A A C G T A G T C A C G T A C G T

YBX1(CSD)/Homo_sapiens-RNCMPT00116-PBM/HughesRNA

Match Rank:7
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CATCGT
AACATCA-
A C G T A C G T A G T C G T C A A C G T A G T C A T C G C G A T
C G T A G T C A A G T C C G T A A G C T A G T C C T G A A C G T

Rbm4.3(RRM)/Danio_rerio-RNCMPT00248-PBM/HughesRNA

Match Rank:8
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CATCGT-
TCGTCGTN
A C G T A G T C G T C A A C G T A G T C A T C G C G A T A C G T
A C G T A G T C A C T G A G C T A G T C A C T G A G C T A G C T

G3BP2(RRM)/Homo_sapiens-RNCMPT00021-PBM/HughesRNA

Match Rank:9
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CATCGT
TCATCCT
A C G T A G T C G T C A A C G T A G T C A T C G C G A T
G A C T G A T C C G T A A C G T A G T C A G T C C G A T

TOD6/MA0350.1/Jaspar

Match Rank:10
Score:0.71
Offset:-10
Orientation:forward strand
Alignment:----------CATCGT-----
AGGCACAGCTCATCGCGTTTT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C G T A G T C A T C G C G A T A C G T A C G T A C G T A C G T A C G T
C G T A A C T G A C T G G T A C C G T A G A T C C G T A A T C G T A G C A C G T A G T C C G T A A C G T A G T C C A T G T A G C T A C G G A C T G A C T G C A T C A G T