p-value: | 1e-2 |
log p-value: | -6.355e+00 |
Information Content per bp: | 1.941 |
Number of Target Sequences with motif | 19.0 |
Percentage of Target Sequences with motif | 15.70% |
Number of Background Sequences with motif | 3567.8 |
Percentage of Background Sequences with motif | 7.51% |
Average Position of motif in Targets | 98.7 +/- 54.5bp |
Average Position of motif in Background | 100.0 +/- 71.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.1 |
Multiplicity (# of sites on avg that occur together) | 1.42 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
CBF4(AP2EREBP)/colamp-CBF4-DAP-Seq(GSE60143)/Homer
Match Rank: | 1 |
Score: | 0.75 |
Offset: | -7 |
Orientation: | reverse strand |
Alignment: | -------AGTCGC-- NNNNNNWHGTCGGYN |
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CBF3(AP2EREBP)/colamp-CBF3-DAP-Seq(GSE60143)/Homer
Match Rank: | 2 |
Score: | 0.73 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AGTCGC--- NNATGTCGGYNR |
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CBF2(AP2EREBP)/colamp-CBF2-DAP-Seq(GSE60143)/Homer
Match Rank: | 3 |
Score: | 0.72 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------AGTCGC--- NNNNNATGTCGGYVR |
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CBF1(AP2EREBP)/colamp-CBF1-DAP-Seq(GSE60143)/Homer
Match Rank: | 4 |
Score: | 0.71 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AGTCGC-- NATGTCGGYR |
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DREB1A/MA0971.1/Jaspar
Match Rank: | 5 |
Score: | 0.69 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGTCGC--- ATGTCGGCAA |
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AT1G77200(AP2EREBP)/colamp-AT1G77200-DAP-Seq(GSE60143)/Homer
Match Rank: | 6 |
Score: | 0.68 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AGTCGC- HWDTGTCGGT |
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PB0179.1_Sp100_2/Jaspar
Match Rank: | 7 |
Score: | 0.67 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AGTCGC------- TCCGTCGCTTAAAAG |
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CBF1/MA1224.1/Jaspar
Match Rank: | 8 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AGTCGC---- NATGTCGGCGAN |
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At4g16750(AP2EREBP)/col-At4g16750-DAP-Seq(GSE60143)/Homer
Match Rank: | 9 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AGTCGC-- TDTGTCGGTD |
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DEAR3(AP2EREBP)/colamp-DEAR3-DAP-Seq(GSE60143)/Homer
Match Rank: | 10 |
Score: | 0.66 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------AGTCGC--- NNNNNWTGTCGGTGV |
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