Information for 23-GCAACAAACA (Motif 18)

C U A G A G U C G U C A C G U A A G U C C G U A G U C A C G U A A U G C G U C A
Reverse Opposite:
A C G U A U C G A C G U A C G U A C G U A C U G C G A U A C G U U C A G A G U C
p-value:1e-7
log p-value:-1.680e+01
Information Content per bp:1.817
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif3.38%
Number of Background Sequences with motif214.2
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets103.9 +/- 55.3bp
Average Position of motif in Background104.3 +/- 62.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-297 MIMAT0004450 Homo sapiens miR-297 Targets (miRBase)

Match Rank:1
Score:0.63
Offset:-10
Orientation:forward strand
Alignment:----------GCAACAAACA-
CATGCACATGCACACATACAT
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U A G A G U C G U C A C G U A A G U C C G U A G U C A C G U A A U G C G U C A A C G U
A G U C C G U A A C G U A C U G A G U C C G U A A G U C C G U A A C G U A C U G A G U C C G U A A G U C C G U A A G U C C G U A A C G U C G U A A G U C C G U A A C G U

hsa-miR-3120-5p MIMAT0019198 Homo sapiens miR-3120-5p Targets (miRBase)

Match Rank:2
Score:0.61
Offset:-9
Orientation:forward strand
Alignment:---------GCAACAAACA--
TGTACAGCAGGCACAGACAGG
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U A G A G U C G U C A C G U A A G U C C G U A G U C A C G U A A U G C G U C A A C G U A C G U
A C G U A C U G A C G U C G U A A G U C C G U A A C U G A G U C C G U A A C U G A C U G A G U C C G U A A G U C C G U A A C U G C G U A A G U C C G U A A C U G A C U G

hsa-miR-4307 MIMAT0016860 Homo sapiens miR-4307 Targets (miRBase)

Match Rank:3
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------GCAACAAACA--
GGAAACAGGAAAAAACATT
A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U A G A G U C G U C A C G U A A G U C C G U A G U C A C G U A A U G C G U C A A C G U A C G U
A C U G A C U G C G U A C G U A C G U A A G U C C G U A A C U G A C U G C G U A C G U A C G U A C G U A C G U A C G U A A G U C C G U A A C G U A C G U

hsa-miR-567 MIMAT0003231 Homo sapiens miR-567 Targets (miRBase)

Match Rank:4
Score:0.60
Offset:-13
Orientation:forward strand
Alignment:-------------GCAACAAACA
GTTCTGTCCTGGAAGAACATACT
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U A G A G U C G U C A C G U A A G U C C G U A G U C A C G U A A U G C G U C A
A C U G A C G U A C G U A G U C A C G U A C U G A C G U A G U C A G U C A C G U A C U G A C U G C G U A C G U A A C U G C G U A C G U A A G U C C G U A A C G U C G U A A G U C A C G U

hsa-miR-147 MIMAT0000251 Homo sapiens miR-147 Targets (miRBase)

Match Rank:5
Score:0.59
Offset:-11
Orientation:forward strand
Alignment:-----------GCAACAAACA
GCAGAAGCATTTCCACACAC-
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U A G A G U C G U C A C G U A A G U C C G U A G U C A C G U A A U G C G U C A
A C U G A G U C C G U A A C U G C G U A C G U A A C U G A G U C C G U A A C G U A C G U A C G U A G U C A G U C C G U A A G U C C G U A A G U C C G U A A G U C A C G U

hsa-miR-3659 MIMAT0018080 Homo sapiens miR-3659 Targets (miRBase)

Match Rank:6
Score:0.59
Offset:-11
Orientation:forward strand
Alignment:-----------GCAACAAACA
TGCCCTCGTAGACAACACTCA
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U A G A G U C G U C A C G U A A G U C C G U A G U C A C G U A A U G C G U C A
A C G U A C U G A G U C A G U C A G U C A C G U A G U C A C U G A C G U C G U A A C U G C G U A A G U C C G U A C G U A A G U C C G U A A G U C A C G U A G U C C G U A

hsa-miR-943 MIMAT0004986 Homo sapiens miR-943 Targets (miRBase)

Match Rank:7
Score:0.58
Offset:-10
Orientation:forward strand
Alignment:----------GCAACAAACA-
CTGGAGGACGGCAACAGTCAG
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U A G A G U C G U C A C G U A A G U C C G U A G U C A C G U A A U G C G U C A A C G U
A G U C A C G U A C U G A C U G C G U A A C U G A C U G C G U A A G U C A C U G A C U G A G U C C G U A C G U A A G U C C G U A A C U G A C G U A G U C C G U A A C U G

hsa-miR-511 MIMAT0002808 Homo sapiens miR-511 Targets (miRBase)

Match Rank:8
Score:0.58
Offset:-10
Orientation:forward strand
Alignment:----------GCAACAAACA-
TGACTGCAGAGCAAAAGACAC
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U A G A G U C G U C A C G U A A G U C C G U A G U C A C G U A A U G C G U C A A C G U
A C G U A C U G C G U A A G U C A C G U A C U G A G U C C G U A A C U G C G U A A C U G A G U C C G U A C G U A C G U A C G U A A C U G C G U A A G U C C G U A A G U C

hsa-miR-4445 MIMAT0018963 Homo sapiens miR-4445 Targets (miRBase)

Match Rank:9
Score:0.57
Offset:-12
Orientation:forward strand
Alignment:------------GCAACAAACA
TGCACGGCAAAAGAAACAATCT
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U A G A G U C G U C A C G U A A G U C C G U A G U C A C G U A A U G C G U C A
A C G U A C U G A G U C C G U A A G U C A C U G A C U G A G U C C G U A C G U A C G U A C G U A A C U G C G U A C G U A C G U A A G U C C G U A C G U A A C G U A G U C A C G U

hsa-miR-744* MIMAT0004946 Homo sapiens miR-744* Targets (miRBase)

Match Rank:10
Score:0.56
Offset:-15
Orientation:forward strand
Alignment:---------------GCAACAAACA
AGGTTGAGGTTAGTGGCAACAG---
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U A G A G U C G U C A C G U A A G U C C G U A G U C A C G U A A U G C G U C A
C G U A A C U G A C U G A C G U A C G U A C U G C G U A A C U G A C U G A C G U A C G U C G U A A C U G A C G U A C U G A C U G A G U C C G U A C G U A A G U C C G U A A C U G A C G U A C G U A C G U