Information for 17-AAAAAAAAAAAAAA (Motif 21)

C T G A G C T A G C T A C G T A G T C A T C G A T G C A T G C A T G C A T G C A G T C A T G C A T G C A C G T A
Reverse Opposite:
G C A T A C G T A C G T C A G T A C G T A C G T A C G T A C G T A G C T C A G T C G A T C G A T C G A T G A C T
p-value:1e-10
log p-value:-2.406e+01
Information Content per bp:1.617
Number of Target Sequences with motif158.0
Percentage of Target Sequences with motif18.70%
Number of Background Sequences with motif5252.3
Percentage of Background Sequences with motif11.03%
Average Position of motif in Targets71.0 +/- 61.9bp
Average Position of motif in Background101.2 +/- 60.7bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VRN1(ABI3VP1)/col-VRN1-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.78
Offset:4
Orientation:reverse strand
Alignment:AAAAAAAAAAAAAA
----AAAAAAAAAA
C T G A G C T A G C T A C G T A G T C A T C G A T G C A T G C A T G C A T G C A G T C A T G C A T G C A C G T A
A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A

SeqBias: polyA-repeat

Match Rank:2
Score:0.78
Offset:4
Orientation:forward strand
Alignment:AAAAAAAAAAAAAA
----AAAAAAAAAA
C T G A G C T A G C T A C G T A G T C A T C G A T G C A T G C A T G C A T G C A G T C A T G C A T G C A C G T A
A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A

OBP3/MA1274.1/Jaspar

Match Rank:3
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--AAAAAAAAAAAAAA-----
AAAAAAAAAANAAAAAGTAAA
A C G T A C G T C T G A G C T A G C T A C G T A G T C A T C G A T G C A T G C A T G C A T G C A G T C A T G C A T G C A C G T A A C G T A C G T A C G T A C G T A C G T
C G T A C G T A T C G A C T G A C G T A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C G T A C G T A C T G A C T G A T C A G G C A T C G T A C T G A T C G A

IDD5(C2H2)/colamp-IDD5-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:AAAAAAAAAAAAAA-
MAVAAAAAGACAAAA
C T G A G C T A G C T A C G T A G T C A T C G A T G C A T G C A T G C A T G C A G T C A T G C A T G C A C G T A A C G T
G T C A C T G A T C A G C G T A G C T A T C G A T G C A T G C A C T A G G T C A A G T C C G T A C G T A T C G A C G T A

AT3G45610/MA1270.1/Jaspar

Match Rank:5
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AAAAAAAAAAAAAA-----
AAAAAAANNAAAAAGTAAA
C T G A G C T A G C T A C G T A G T C A T C G A T G C A T G C A T G C A T G C A G T C A T G C A T G C A C G T A A C G T A C G T A C G T A C G T A C G T
T C G A C G T A C G T A C T G A G C T A C T G A C T G A C T A G A T G C C T G A C G T A C G T A G T C A C G T A A C T G A C G T C G T A C T G A G T C A

AT1G69570/MA1268.1/Jaspar

Match Rank:6
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------AAAAAAAAAAAAAA-------
AAAAAAAAAAAAAAGAAAAAGTGAAAA
A C G T A C G T A C G T A C G T A C G T A C G T C T G A G C T A G C T A C G T A G T C A T C G A T G C A T G C A T G C A T G C A G T C A T G C A T G C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C T G A C T G A C G T A C G T A C T G A C T G A C T A G C T G A C G T A C G T A C T G A C T G A A C T G G C A T C T A G G T C A G C T A C G T A C G T A

SGR5/MA1159.1/Jaspar

Match Rank:7
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AAAAAAAAAAAAAA
AAAAAAAGACAAAAA
A C G T C T G A G C T A G C T A C G T A G T C A T C G A T G C A T G C A T G C A T G C A G T C A T G C A T G C A C G T A
G C T A T C G A C T G A C G T A C G T A T C G A C G T A C T A G G T C A A T G C T C G A G C T A C G T A G C T A G C T A

PB0182.1_Srf_2/Jaspar

Match Rank:8
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----AAAAAAAAAAAAAA
GTTAAAAAAAAAAATTA-
A C G T A C G T A C G T A C G T C T G A G C T A G C T A C G T A G T C A T C G A T G C A T G C A T G C A T G C A G T C A T G C A T G C A C G T A
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T A C G T

ZNF384/MA1125.1/Jaspar

Match Rank:9
Score:0.70
Offset:2
Orientation:forward strand
Alignment:AAAAAAAAAAAAAA
--TTTAAAAAAAAA
C T G A G C T A G C T A C G T A G T C A T C G A T G C A T G C A T G C A T G C A G T C A T G C A T G C A C G T A
A C G T A C G T C G A T G C A T C G A T G T C A C G T A G C T A C G T A C G T A G C T A G C T A G C T A G C T A

COG1/MA1279.1/Jaspar

Match Rank:10
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AAAAAAAAAAAAAA-------
AAAAAAAAGAAAAAGTGAAAA
C T G A G C T A G C T A C G T A G T C A T C G A T G C A T G C A T G C A T G C A G T C A T G C A T G C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A C G T A C T G A C T G A C T G A C T G A C T A G C T G A G C T A G T C A C T G A C T G A A C T G C A G T C T A G G T C A G C T A G C T A C T G A