Information for 23-CTGAAAATAAAG (Motif 19)

A G T C A C G T A C T G C G T A C G T A C G T A C G T A A C G T C G T A C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C C G T A A C T G
p-value:1e-9
log p-value:-2.158e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets165.0 +/- 14.1bp
Average Position of motif in Background154.4 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PABPC1(?)/MEL-PABC1-CLIP-Seq(GSE69755)/Homer

Match Rank:1
Score:0.74
Offset:4
Orientation:forward strand
Alignment:CTGAAAATAAAG--
----HAATAAAGNN
A G T C A C G T A C T G C G T A C G T A C G T A C G T A A C G T C G T A C G T A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G C T A C G T A C G A T C G T A G T C A C T G A A T C G C G A T A C G T

zen/dmmpmm(Down)/fly

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CTGAAAATAAAG
ATAAAAATAAA-
A G T C A C G T A C T G C G T A C G T A C G T A C G T A A C G T C G T A C G T A C G T A A C T G
G C T A C A G T C G T A C G T A G T C A T G C A C T G A G A C T C G T A T G C A G C T A A C G T

HuR(RRM)/Homo_sapiens-RNCMPT00032-PBM/HughesRNA

Match Rank:3
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:CTGAAAATAAAG
---AAAATAA--
A G T C A C G T A C T G C G T A C G T A C G T A C G T A A C G T C G T A C G T A C G T A A C T G
A C G T A C G T A C G T T C G A C G T A C G T A G T C A G C A T C G T A C G T A A C G T A C G T

Mef2/dmmpmm(Papatsenko)/fly

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CTGAAAATAAAG
CTAAAAATAA--
A G T C A C G T A C T G C G T A C G T A C G T A C G T A A C G T C G T A C G T A C G T A A C T G
A G T C A G C T C G T A C G T A C G T A C G T A C G T A A C G T C G T A T C G A A C G T A C G T

MEF2A/MA0052.4/Jaspar

Match Rank:5
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CTGAAAATAAAG-
TTCTAAAAATAGAAA
A C G T A C G T A G T C A C G T A C T G C G T A C G T A C G T A C G T A A C G T C G T A C G T A C G T A A C T G A C G T
C G A T C A G T G A T C G A C T C G T A C G T A C G T A C G T A C G T A G C A T C T G A C T A G G T C A G C T A G C T A

zen/dmmpmm(Bigfoot)/fly

Match Rank:6
Score:0.70
Offset:5
Orientation:forward strand
Alignment:CTGAAAATAAAG
-----AATAAA-
A G T C A C G T A C T G C G T A C G T A C G T A C G T A A C G T C G T A C G T A C G T A A C T G
A C G T A C G T A C G T A C G T A C G T G T C A C G T A A C G T C G T A C G T A C G T A A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CTGAAAATAAAG
DCYAAAAATAGM-
A C G T A G T C A C G T A C T G C G T A C G T A C G T A C G T A A C G T C G T A C G T A C G T A A C T G
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T

ZC3H14(Znf)/Homo_sapiens-RNCMPT00086-PBM/HughesRNA

Match Rank:8
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:CTGAAAATAAAG
----AAACAAA-
A G T C A C G T A C T G C G T A C G T A C G T A C G T A A C G T C G T A C G T A C G T A A C T G
A C G T A C G T A C G T A C G T C G T A G T C A G T C A G T A C G T C A C G T A G T C A A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTGAAAATAAAG
CCAAAAATAG--
A G T C A C G T A C T G C G T A C G T A C G T A C G T A A C G T C G T A C G T A C G T A A C T G
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T

RLM1(MacIsaac)/Yeast

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTGAAAATAAAG
TCTATAAATA---
A C G T A G T C A C G T A C T G C G T A C G T A C G T A C G T A A C G T C G T A C G T A C G T A A C T G
G A C T T A G C A G C T G C T A G C A T G T C A G T C A C G T A G C A T C T G A A C G T A C G T A C G T