p-value: | 1e-16 |
log p-value: | -3.812e+01 |
Information Content per bp: | 1.849 |
Number of Target Sequences with motif | 8.0 |
Percentage of Target Sequences with motif | 0.53% |
Number of Background Sequences with motif | 1.8 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 78.1 +/- 39.1bp |
Average Position of motif in Background | 93.8 +/- 6.5bp |
Strand Bias (log2 ratio + to - strand density) | 0.7 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Tb_0251(RRM)/Trypanosoma_brucei-RNCMPT00251-PBM/HughesRNA
Match Rank: | 1 |
Score: | 0.61 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GGCYYTCACRSYCT ---ATTCACA---- |
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hkb/dmmpmm(Noyes)/fly
Match Rank: | 2 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GGCYYTCACRSYCT- ---CNTCACGCCCCC |
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hkb/MA0450.1/Jaspar
Match Rank: | 3 |
Score: | 0.59 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GGCYYTCACRSYCT -----TCACGCCCC |
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FHY3/MA0557.1/Jaspar
Match Rank: | 4 |
Score: | 0.59 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GGCYYTCACRSYCT-- ----CTCACGCGCTCA |
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ZKSCAN5/MA1652.1/Jaspar
Match Rank: | 5 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GGCYYTCACRSYCT-- --NNCTCACCTCCTNN |
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PB0013.1_Eomes_1/Jaspar
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGCYYTCACRSYCT--- NNTTTTCACACCTTNNN |
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GCR1/Literature(Harbison)/Yeast
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGCYYTCACRSYCT GGCTTCCAC----- |
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Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer
Match Rank: | 8 |
Score: | 0.57 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GGCYYTCACRSYCT ----TTMACACCTT |
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FAR1(FAR1)/col-FAR1-DAP-Seq(GSE60143)/Homer
Match Rank: | 9 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGCYYTCACRSYCT TKNNNYYCACGCGCY |
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At_0284(RRM)/Arabidopsis_thaliana-RNCMPT00284-PBM/HughesRNA
Match Rank: | 10 |
Score: | 0.56 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GGCYYTCACRSYCT -----TCACACT-- |
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