Information for 8-CAKSCCAWMCTCAA (Motif 11)

A G T C C G T A A C G T A T G C A G T C A G T C C G T A C G T A G T C A A G T C A C G T A G T C G T C A C G T A
Reverse Opposite:
A C G T A C G T A C T G C G T A A C T G A C G T C G A T A C G T A C T G A C T G A T C G G T C A A C G T C T A G
p-value:1e-13
log p-value:-3.080e+01
Information Content per bp:1.883
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets124.2 +/- 50.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CAKSCCAWMCTCAA
NNNTCCATCCCATAANN--
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A T G C A G T C A G T C C G T A C G T A G T C A A G T C A C G T A G T C G T C A C G T A
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A A C G T A C G T

RUNX3/MA0684.2/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CAKSCCAWMCTCAA--
----AAAACCTCAAAT
A G T C C G T A A C G T A T G C A G T C A G T C C G T A C G T A G T C A A G T C A C G T A G T C G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G C T A T C G A C T G A G A T C T G A C C G A T T G A C G C T A C T G A G C T A G A C T

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAKSCCAWMCTCAA
ACTATGCCAACCTACC
A C G T A C G T A G T C C G T A A C G T A T G C A G T C A G T C C G T A C G T A G T C A A G T C A C G T A G T C G T C A C G T A
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

ZNF449/MA1656.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAKSCCAWMCTCAA
CCAAGCCCAACCAG--
A C G T A C G T A G T C C G T A A C G T A T G C A G T C A G T C C G T A C G T A G T C A A G T C A C G T A G T C G T C A C G T A
G T A C T G A C T G C A G C T A C T A G T A G C G T A C G T A C G C T A C T G A T G A C G T A C G T C A T A C G A C G T A C G T

CG7804(RRM)/Drosophila_melanogaster-RNCMPT00146-PBM/HughesRNA

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CAKSCCAWMCTCAA
----CCACACT---
A G T C C G T A A C G T A T G C A G T C A G T C C G T A C G T A G T C A A G T C A C G T A G T C G T C A C G T A
A C G T A C G T A C G T A C G T A G T C G T A C C G T A A G T C G T C A G T A C C G A T A C G T A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CAKSCCAWMCTCAA----
--TGCCAAAATAAACANN
A G T C C G T A A C G T A T G C A G T C A G T C C G T A C G T A G T C A A G T C A C G T A G T C G T C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

z/dmmpmm(SeSiMCMC)/fly

Match Rank:7
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:CAKSCCAWMCTCAA
-------CACTCAA
A G T C C G T A A C G T A T G C A G T C A G T C C G T A C G T A G T C A A G T C A C G T A G T C G T C A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A A G T C A C G T A G T C T C G A G C T A

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAKSCCAWMCTCAA
-ATGCCAACC----
A G T C C G T A A C G T A T G C A G T C A G T C C G T A C G T A G T C A A G T C A C G T A G T C G T C A C G T A
A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T

CG11360(KH)/Drosophila_melanogaster-RNCMPT00129-PBM/HughesRNA

Match Rank:9
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CAKSCCAWMCTCAA
-----TATACTCT-
A G T C C G T A A C G T A T G C A G T C A G T C C G T A C G T A G T C A A G T C A C G T A G T C G T C A C G T A
A C G T A C G T A C G T A C G T A C G T A G C T C G T A G C A T G C T A A G T C G C A T A G T C C G A T A C G T

NKX2-5/MA0063.2/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CAKSCCAWMCTCAA--
-----ACCACTCAAAA
A G T C C G T A A C G T A T G C A G T C A G T C C G T A C G T A G T C A A G T C A C G T A G T C G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A