Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| PABPC1(?)/MEL-PABC1-CLIP-Seq(GSE69755)/Homer | 1e-19 | -4.559e+01 | 0.0000 | 264.0 | 68.57% | 21607.1 | 45.15% | motif file (matrix) |
svg |
2 |
| PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer | 1e-5 | -1.317e+01 | 0.0010 | 273.0 | 70.91% | 28442.1 | 59.44% | motif file (matrix) |
svg |
3 |
| HDG1(Homeobox)/col100-HDG1-DAP-Seq(GSE60143)/Homer | 1e-5 | -1.229e+01 | 0.0015 | 96.0 | 24.94% | 7665.6 | 16.02% | motif file (matrix) |
svg |
4 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-4 | -1.122e+01 | 0.0034 | 92.0 | 23.90% | 7444.1 | 15.56% | motif file (matrix) |
svg |
5 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-4 | -1.110e+01 | 0.0034 | 122.0 | 31.69% | 10694.4 | 22.35% | motif file (matrix) |
svg |
6 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-4 | -1.013e+01 | 0.0067 | 69.0 | 17.92% | 5282.2 | 11.04% | motif file (matrix) |
svg |
7 |
| At3g24120(G2like)/col-At3g24120-DAP-Seq(GSE60143)/Homer | 1e-4 | -9.798e+00 | 0.0080 | 192.0 | 49.87% | 19141.4 | 40.00% | motif file (matrix) |
svg |
8 |
| SPL1(SBP)/colamp-SPL1-DAP-Seq(GSE60143)/Homer | 1e-3 | -8.983e+00 | 0.0158 | 128.0 | 33.25% | 11874.2 | 24.81% | motif file (matrix) |
svg |
9 |
| caudal(Homeobox)/Drosophila-Embryos-ChIP-Chip(modEncode)/Homer | 1e-3 | -8.184e+00 | 0.0312 | 89.0 | 23.12% | 7757.5 | 16.21% | motif file (matrix) |
svg |
10 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-3 | -8.132e+00 | 0.0312 | 90.0 | 23.38% | 7877.2 | 16.46% | motif file (matrix) |
svg |
11 |
| HDG7(HB)/col-HDG7-DAP-Seq(GSE60143)/Homer | 1e-3 | -8.008e+00 | 0.0312 | 32.0 | 8.31% | 2052.0 | 4.29% | motif file (matrix) |
svg |
12 |
| ANL2(HB)/col-ANL2-DAP-Seq(GSE60143)/Homer | 1e-3 | -7.963e+00 | 0.0312 | 78.0 | 20.26% | 6630.8 | 13.86% | motif file (matrix) |
svg |
13 |
| EGL-5(Homeobox)/cElegans-L3-EGL5-ChIP-Seq(modEncode)/Homer | 1e-3 | -7.173e+00 | 0.0594 | 136.0 | 35.32% | 13305.3 | 27.80% | motif file (matrix) |
svg |
14 |
| Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer | 1e-3 | -7.083e+00 | 0.0603 | 193.0 | 50.13% | 20122.2 | 42.05% | motif file (matrix) |
svg |
15 |
| Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer | 1e-2 | -6.791e+00 | 0.0753 | 144.0 | 37.40% | 14359.6 | 30.01% | motif file (matrix) |
svg |
16 |
| Unknown4/Arabidopsis-Promoters/Homer | 1e-2 | -6.641e+00 | 0.0821 | 41.0 | 10.65% | 3094.9 | 6.47% | motif file (matrix) |
svg |
17 |
| FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer | 1e-2 | -6.619e+00 | 0.0821 | 97.0 | 25.19% | 9032.3 | 18.88% | motif file (matrix) |
svg |
18 |
| ERF115(AP2EREBP)/colamp-ERF115-DAP-Seq(GSE60143)/Homer | 1e-2 | -6.478e+00 | 0.0859 | 34.0 | 8.83% | 2442.5 | 5.10% | motif file (matrix) |
svg |
19 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-2 | -6.466e+00 | 0.0859 | 121.0 | 31.43% | 11795.7 | 24.65% | motif file (matrix) |
svg |
20 |
| Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer | 1e-2 | -6.376e+00 | 0.0859 | 161.0 | 41.82% | 16511.7 | 34.50% | motif file (matrix) |
svg |
21 |
| AT5G25475(ABI3VP1)/col-AT5G25475-DAP-Seq(GSE60143)/Homer | 1e-2 | -6.200e+00 | 0.0972 | 58.0 | 15.06% | 4909.9 | 10.26% | motif file (matrix) |
svg |
22 |
| SeqBias: TA-repeat | 1e-2 | -6.151e+00 | 0.0975 | 273.0 | 70.91% | 30570.0 | 63.88% | motif file (matrix) |
svg |
23 |
| Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer | 1e-2 | -5.910e+00 | 0.1186 | 58.0 | 15.06% | 4974.5 | 10.40% | motif file (matrix) |
svg |
24 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-2 | -5.741e+00 | 0.1346 | 95.0 | 24.68% | 9064.2 | 18.94% | motif file (matrix) |
svg |
25 |
| At5g66730(C2H2)/colamp-At5g66730-DAP-Seq(GSE60143)/Homer | 1e-2 | -5.706e+00 | 0.1346 | 30.0 | 7.79% | 2177.7 | 4.55% | motif file (matrix) |
svg |
26 |
| AT3G51470(DBP)/col-AT3G51470-DAP-Seq(GSE60143)/Homer | 1e-2 | -5.700e+00 | 0.1346 | 88.0 | 22.86% | 8292.0 | 17.33% | motif file (matrix) |
svg |
27 |
| CRF4(AP2EREBP)/colamp-CRF4-DAP-Seq(GSE60143)/Homer | 1e-2 | -5.587e+00 | 0.1396 | 8.0 | 2.08% | 306.0 | 0.64% | motif file (matrix) |
svg |
28 |
| GATA1(C2C2gata)/colamp-GATA1-DAP-Seq(GSE60143)/Homer | 1e-2 | -5.556e+00 | 0.1396 | 27.0 | 7.01% | 1914.9 | 4.00% | motif file (matrix) |
svg |
29 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-2 | -5.413e+00 | 0.1546 | 91.0 | 23.64% | 8715.7 | 18.21% | motif file (matrix) |
svg |
30 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-2 | -5.371e+00 | 0.1559 | 116.0 | 30.13% | 11582.1 | 24.20% | motif file (matrix) |
svg |
31 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-2 | -5.273e+00 | 0.1665 | 134.0 | 34.81% | 13718.0 | 28.67% | motif file (matrix) |
svg |
32 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-2 | -5.226e+00 | 0.1690 | 119.0 | 30.91% | 11981.9 | 25.04% | motif file (matrix) |
svg |
33 |
| RAV1(RAV)/colamp-RAV1-DAP-Seq(GSE60143)/Homer | 1e-2 | -5.202e+00 | 0.1690 | 83.0 | 21.56% | 7883.4 | 16.47% | motif file (matrix) |
svg |
34 |
| IDD4(C2H2)/col-IDD4-DAP-Seq(GSE60143)/Homer | 1e-2 | -5.185e+00 | 0.1690 | 93.0 | 24.16% | 9013.7 | 18.84% | motif file (matrix) |
svg |
35 |
| GATA11(C2C2gata)/col-GATA11-DAP-Seq(GSE60143)/Homer | 1e-2 | -5.068e+00 | 0.1809 | 27.0 | 7.01% | 1988.1 | 4.15% | motif file (matrix) |
svg |
36 |
| ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.046e+00 | 0.1809 | 5.0 | 1.30% | 143.3 | 0.30% | motif file (matrix) |
svg |
37 |
| ERF11(AP2EREBP)/col-ERF11-DAP-Seq(GSE60143)/Homer | 1e-2 | -4.903e+00 | 0.2019 | 16.0 | 4.16% | 992.6 | 2.07% | motif file (matrix) |
svg |
38 |
| PHV(HB)/col-PHV-DAP-Seq(GSE60143)/Homer | 1e-2 | -4.849e+00 | 0.2075 | 50.0 | 12.99% | 4377.5 | 9.15% | motif file (matrix) |
svg |
39 |
| Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer | 1e-2 | -4.827e+00 | 0.2075 | 61.0 | 15.84% | 5566.0 | 11.63% | motif file (matrix) |
svg |
40 |
| HuR(?)/HEK293-HuR-CLIP-Seq(GSE87887)/Homer | 1e-2 | -4.818e+00 | 0.2075 | 280.0 | 72.73% | 32017.4 | 66.91% | motif file (matrix) |
svg |
41 |
| GATA20(C2C2gata)/colamp-GATA20-DAP-Seq(GSE60143)/Homer | 1e-2 | -4.769e+00 | 0.2082 | 124.0 | 32.21% | 12735.9 | 26.61% | motif file (matrix) |
svg |