Information for 1-AATAAACT (Motif 1)

C G T A C G T A A C G T C G T A G T C A C G T A G T A C A G C T
Reverse Opposite:
C T G A A C T G A C G T A C G T A C G T C G T A A C G T A C G T
p-value:1e-16
log p-value:-3.821e+01
Information Content per bp:1.904
Number of Target Sequences with motif118.0
Percentage of Target Sequences with motif31.13%
Number of Background Sequences with motif6751.3
Percentage of Background Sequences with motif14.15%
Average Position of motif in Targets119.7 +/- 52.8bp
Average Position of motif in Background98.9 +/- 60.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

zen/dmmpmm(Bigfoot)/fly

Match Rank:1
Score:0.90
Offset:0
Orientation:forward strand
Alignment:AATAAACT
AATAAA--
C G T A C G T A A C G T C G T A G T C A C G T A G T A C A G C T
G T C A C G T A A C G T C G T A C G T A C G T A A C G T A C G T

PABPC1(?)/MEL-PABC1-CLIP-Seq(GSE69755)/Homer

Match Rank:2
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-AATAAACT-
HAATAAAGNN
A C G T C G T A C G T A A C G T C G T A G T C A C G T A G T A C A G C T A C G T
G A T C G C T A C G T A C G A T C G T A G T C A C T G A A T C G C G A T A C G T

cad/dmmpmm(Noyes)/fly

Match Rank:3
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--AATAAACT
NTAATAAA--
A C G T A C G T C G T A C G T A A C G T C G T A G T C A C G T A G T A C A G C T
A T G C A G C T G T C A G T C A G A C T C G T A G C T A C T G A A C G T A C G T

KHDRBS2(KH)/Homo_sapiens-RNCMPT00185-PBM/HughesRNA

Match Rank:4
Score:0.84
Offset:0
Orientation:forward strand
Alignment:AATAAACT
GATAAAA-
C G T A C G T A A C G T C G T A G T C A C G T A G T A C A G C T
C T A G G T C A A G C T C G T A C G T A C G T A G T C A A C G T

KHDRBS3(KH)/Homo_sapiens-RNCMPT00034-PBM/HughesRNA

Match Rank:5
Score:0.82
Offset:0
Orientation:forward strand
Alignment:AATAAACT
GATAAACN
C G T A C G T A A C G T C G T A G T C A C G T A G T A C A G C T
C T A G C G T A A C G T C G T A C G T A C G T A T A G C T A C G

CDX2/MA0465.2/Jaspar

Match Rank:6
Score:0.81
Offset:-4
Orientation:forward strand
Alignment:----AATAAACT
AAGCAATAAAAA
A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A G T C A C G T A G T A C A G C T
C T G A C G T A C T A G G A T C G T C A C T G A A G C T C G T A C G T A G C T A C G T A G C T A

PH0075.1_Hoxd10/Jaspar

Match Rank:7
Score:0.81
Offset:-5
Orientation:forward strand
Alignment:-----AATAAACT----
AATGCAATAAAATTTAT
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A G T C A C G T A G T A C A G C T A C G T A C G T A C G T A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

Antp/dmmpmm(Bigfoot)/fly

Match Rank:8
Score:0.81
Offset:0
Orientation:forward strand
Alignment:AATAAACT
AATAAT--
C G T A C G T A A C G T C G T A G T C A C G T A G T A C A G C T
T G C A C G T A A C G T C T G A C G T A C G A T A C G T A C G T

HOXB13/MA0901.2/Jaspar

Match Rank:9
Score:0.80
Offset:-4
Orientation:forward strand
Alignment:----AATAAACT--
AACCAATAAAATTT
A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A G T C A C G T A G T A C A G C T A C G T A C G T
C G T A C G T A G T A C G A T C G C T A C G T A A C G T C G T A G C T A G C T A G C T A G C A T G C A T G C A T

cad/dmmpmm(Noyes_hd)/fly

Match Rank:10
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--AATAAACT
NTAATAAAAN
A C G T A C G T C G T A C G T A A C G T C G T A G T C A C G T A G T A C A G C T
A T G C G A C T G T C A C G T A A C G T G C T A C G T A C G T A C G T A C T G A