Information for 6-GCAGGAGC (Motif 15)

C T A G G A T C C G T A A T C G T C A G T C G A A C T G A T G C
Reverse Opposite:
T A C G T G A C A G C T A G T C T A G C G C A T C T A G G A T C
p-value:1e-3
log p-value:-8.793e+00
Information Content per bp:1.594
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif17.50%
Number of Background Sequences with motif4558.8
Percentage of Background Sequences with motif9.76%
Average Position of motif in Targets70.2 +/- 54.9bp
Average Position of motif in Background98.0 +/- 63.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF4/MA0830.2/Jaspar

Match Rank:1
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---GCAGGAGC--
NNGGCAGGTGCNN
A C G T A C G T A C G T C T A G G A T C C G T A A T C G T C A G T C G A A C T G A T G C A C G T A C G T
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G A G C T A T C G A T G C G T A C T A C G

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:2
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---GCAGGAGC--
NNGGCAGGTGCNN
A C G T A C G T A C G T C T A G G A T C C G T A A T C G T C A G T C G A A C T G A T G C A C G T A C G T
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G G A C T T A C G A T G C G C A T T A C G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGAGC--
SDGCAGGTGCNS
A C G T A C G T C T A G G A T C C G T A A T C G T C A G T C G A A C T G A T G C A C G T A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:4
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGAGC-
NNGCAGGTGNN
A C G T A C G T C T A G G A T C C G T A A T C G T C A G T C G A A C T G A T G C A C G T
T A G C T C A G T C A G A G T C T C G A A T C G T A C G A G C T T C A G A T G C A T C G

TCF3/MA0522.3/Jaspar

Match Rank:5
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGAGC-
NNGCAGGTGNN
A C G T A C G T C T A G G A T C C G T A A T C G T C A G T C G A A C T G A T G C A C G T
T A C G A T C G T C A G A G T C T C G A A T C G T A C G A G C T T A C G A T G C A T C G

ttk/dmmpmm(Papatsenko)/fly

Match Rank:6
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GCAGGAGC
GCCAGGACC
A C G T C T A G G A T C C G T A A T C G T C A G T C G A A C T G A T G C
T A C G A T C G T G A C C T G A A C T G A C T G C G T A A G T C G T A C

SOK2/SOK2_BUT14/4-SUT1(Harbison)/Yeast

Match Rank:7
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GCAGGAGC
TGCAGGNA-
A C G T C T A G G A T C C G T A A T C G T C A G T C G A A C T G A T G C
A G C T C T A G G T A C C T G A A C T G T A C G T G C A T C G A A C G T

SRSF9(RRM)/Homo_sapiens-RNCMPT00074-PBM/HughesRNA

Match Rank:8
Score:0.76
Offset:2
Orientation:forward strand
Alignment:GCAGGAGC-
--AGGAGCA
C T A G G A T C C G T A A T C G T C A G T C G A A C T G A T G C A C G T
A C G T A C G T C G T A C A T G C T A G C G T A T A C G G T A C C T G A

ttk/dmmpmm(SeSiMCMC)/fly

Match Rank:9
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GCAGGAGC
GCAGGACC
C T A G G A T C C G T A A T C G T C A G T C G A A C T G A T G C
A T C G G T A C C T G A A C T G A C T G C G T A A G T C G T A C

OSR2/MA1646.1/Jaspar

Match Rank:10
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--GCAGGAGC--
AAACAGAAGCAG
A C G T A C G T C T A G G A T C C G T A A T C G T C A G T C G A A C T G A T G C A C G T A C G T
G T C A G T C A T G C A T A G C C T G A T A C G C G T A T C G A C T A G A G T C G T C A T C A G