p-value: | 1e-20 |
log p-value: | -4.681e+01 |
Information Content per bp: | 1.660 |
Number of Target Sequences with motif | 97.0 |
Percentage of Target Sequences with motif | 6.55% |
Number of Background Sequences with motif | 1010.8 |
Percentage of Background Sequences with motif | 2.16% |
Average Position of motif in Targets | 98.5 +/- 44.3bp |
Average Position of motif in Background | 100.0 +/- 61.9bp |
Strand Bias (log2 ratio + to - strand density) | 0.2 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Tb_0230(RRM)/Trypanosoma_brucei-RNCMPT00230-PBM/HughesRNA
Match Rank: | 1 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GAAGGTSCTG AGAAGGAC--- |
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ttk/dmmpmm(Pollard)/fly
Match Rank: | 2 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GAAGGTSCTG-- CAAGGTCCTGGC |
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REF2(RRM)/Drosophila_melanogaster-RNCMPT00059-PBM/HughesRNA
Match Rank: | 3 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GAAGGTSCTG AGAAGGC---- |
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RARG(var.3)/MA1553.1/Jaspar
Match Rank: | 4 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GAAGGTSCTG----- -AAGGTCATGACCTT |
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PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer
Match Rank: | 5 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GAAGGTSCTG--- VAGRACAKNCTGTBC |
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ttk/dmmpmm(Bigfoot)/fly
Match Rank: | 6 |
Score: | 0.60 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GAAGGTSCTG ---GGTCCTG |
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POL008.1_DCE_S_I/Jaspar
Match Rank: | 7 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GAAGGTSCTG NGAAGC----- |
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RARB(var.3)/MA1552.1/Jaspar
Match Rank: | 8 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GAAGGTSCTG----- -AAGGTCATGACCTT |
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ttk/dmmpmm(SeSiMCMC)/fly
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GAAGGTSCTG- ---GGTCCTGC |
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Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer
Match Rank: | 10 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GAAGGTSCTG-- --ACTTCCTGTT |
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