Information for 11-AAGAAGAAGC (Motif 8)

G T C A G C T A C T A G G T C A T G C A T C A G T G C A C G T A C T A G G T A C
Reverse Opposite:
C A T G G A T C G C A T A C G T A G T C A C G T C A G T G A T C C G A T C A G T
p-value:1e-7
log p-value:-1.721e+01
Information Content per bp:1.575
Number of Target Sequences with motif123.0
Percentage of Target Sequences with motif50.41%
Number of Background Sequences with motif15588.4
Percentage of Background Sequences with motif33.43%
Average Position of motif in Targets98.3 +/- 57.0bp
Average Position of motif in Background99.5 +/- 64.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PEND/MA0127.1/Jaspar

Match Rank:1
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:AAGAAGAAGC
AATAAGAAGT
G T C A G C T A C T A G G T C A T G C A T C A G T G C A C G T A C T A G G T A C
T G C A C G T A A C G T G C T A T C G A C T A G G C T A G T C A T C A G A G C T

TRA2(RRM)/Drosophila_melanogaster-RNCMPT00078-PBM/HughesRNA

Match Rank:2
Score:0.80
Offset:2
Orientation:forward strand
Alignment:AAGAAGAAGC
--GAAGAAG-
G T C A G C T A C T A G G T C A T G C A T C A G T G C A C G T A C T A G G T A C
A C G T A C G T T C A G C G T A C T G A A T C G C G T A C G T A A T C G A C G T

AZF1/MA0277.1/Jaspar

Match Rank:3
Score:0.75
Offset:0
Orientation:forward strand
Alignment:AAGAAGAAGC
AAAAAGAAA-
G T C A G C T A C T A G G T C A T G C A T C A G T G C A C G T A C T A G G T A C
C G T A C G T A C G T A G T C A C T G A A C T G G T C A C G T A C G T A A C G T

Unknown4/Arabidopsis-Promoters/Homer

Match Rank:4
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-AAGAAGAAGC
RAAGAMGAMG-
A C G T G T C A G C T A C T A G G T C A T G C A T C A G T G C A C G T A C T A G G T A C
C T A G C T G A T G C A C T A G C G T A G T A C C T A G T G C A G T C A T A C G A C G T

PABPN1(RRM)/Homo_sapiens-RNCMPT00157-PBM/HughesRNA

Match Rank:5
Score:0.74
Offset:1
Orientation:forward strand
Alignment:AAGAAGAAGC
-AGAAGAN--
G T C A G C T A C T A G G T C A T G C A T C A G T G C A C G T A C T A G G T A C
A C G T C G T A C T A G C G T A C G T A T C A G C G T A A G T C A C G T A C G T

OSR2/MA1646.1/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AAGAAGAAGC--
AAACAGAAGCAG
G T C A G C T A C T A G G T C A T G C A T C A G T G C A C G T A C T A G G T A C A C G T A C G T
G T C A G T C A T G C A T A G C C T G A T A C G C G T A T C G A C T A G A G T C G T C A T C A G

Stat2/MA1623.1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AAGAAGAAGC-
AGAAACAGAAACT
A C G T A C G T G T C A G C T A C T A G G T C A T G C A T C A G T G C A C G T A C T A G G T A C A C G T
C T G A C T A G C T G A G C T A T C G A T A G C G C T A C T A G T C G A C T G A T C G A T A G C G C A T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAGAAGAAGC-
AAAGRGGAAGTG
A C G T G T C A G C T A C T A G G T C A T G C A T C A G T G C A C G T A C T A G G T A C A C G T
C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G

RLR1/RLR1_YPD/[](Harbison)/Yeast

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AAGAAGAAGC-
AAAGAAGAAAAT
A C G T G T C A G C T A C T A G G T C A T G C A T C A G T G C A C G T A C T A G G T A C A C G T
C T G A C G T A G C T A C T A G C G T A C T G A C T A G C G T A C G T A C G T A C G T A C A G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:10
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----AAGAAGAAGC-
AACAAACAACAAGAG
A C G T A C G T A C G T A C G T G T C A G C T A C T A G G T C A T G C A T C A G T G C A C G T A C T A G G T A C A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G