p-value: | 1e-2 |
log p-value: | -5.882e+00 |
Information Content per bp: | 1.909 |
Number of Target Sequences with motif | 22.0 |
Percentage of Target Sequences with motif | 37.29% |
Number of Background Sequences with motif | 10383.2 |
Percentage of Background Sequences with motif | 20.86% |
Average Position of motif in Targets | 101.5 +/- 45.8bp |
Average Position of motif in Background | 100.5 +/- 62.9bp |
Strand Bias (log2 ratio + to - strand density) | 1.2 |
Multiplicity (# of sites on avg that occur together) | 1.32 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
CPO(RRM)/Drosophila_melanogaster-RNCMPT00133-PBM/HughesRNA
Match Rank: | 1 |
Score: | 0.82 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGCACT NTGCACA |
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SNF(RRM)/Drosophila_melanogaster-RNCMPT00145-PBM/HughesRNA
Match Rank: | 2 |
Score: | 0.80 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TGCACT ATTGCACA |
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Pr_0249(RRM)/Phytophthora_ramorum-RNCMPT00249-PBM/HughesRNA
Match Rank: | 3 |
Score: | 0.80 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGCACT TTGCACA |
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Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
Match Rank: | 4 |
Score: | 0.79 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGCACT--- MRSCACTYAA |
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SNRPA(RRM)/Homo_sapiens-RNCMPT00071-PBM/HughesRNA
Match Rank: | 5 |
Score: | 0.79 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGCACT TTGCACA |
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Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
Match Rank: | 6 |
Score: | 0.78 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGCACT--- AAGCACTTAA |
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Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 7 |
Score: | 0.78 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGCACT--- AASCACTCAA |
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MEC-8(RRM)/Caenorhabditis_elegans-RNCMPT00181-PBM/HughesRNA
Match Rank: | 8 |
Score: | 0.78 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGCACT NTGCACA |
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PB0099.1_Zfp691_1/Jaspar
Match Rank: | 9 |
Score: | 0.77 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------TGCACT----- NNNNTGAGCACTGTNNG |
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At5g04390(C2H2)/col200-At5g04390-DAP-Seq(GSE60143)/Homer
Match Rank: | 10 |
Score: | 0.77 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TGCACT NHNTCACT |
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