Information for 20-AGGCCCGCTA (Motif 16)

C G T A A T C G A C T G A T G C A G T C A G T C A C T G A T G C A C G T C G T A
Reverse Opposite:
A C G T C G T A A T C G A G T C A C T G A C T G A T C G A G T C A T G C A C G T
p-value:1e-10
log p-value:-2.483e+01
Information Content per bp:1.933
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets70.2 +/- 53.3bp
Average Position of motif in Background145.4 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ROX1(MacIsaac)/Yeast

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AGGCCCGCTA
ANAAGCCCGC--
A C G T A C G T C G T A A T C G A C T G A T G C A G T C A G T C A C T G A T G C A C G T C G T A
C T G A C T G A G T C A C T G A A T C G G T A C T G A C A G T C A T C G T A G C A C G T A C G T

TEA1/MA0405.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGGCCCGCTA
ATGCCCGC--
C G T A A T C G A C T G A T G C A G T C A G T C A C T G A T G C A C G T C G T A
C T G A G C A T A T C G A G C T A T G C A G T C A C T G G T A C A C G T A C G T

STP3/MA0396.1/Jaspar

Match Rank:3
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:AGGCCCGCTA--
---TGCGCTAGC
C G T A A T C G A C T G A T G C A G T C A G T C A C T G A T G C A C G T C G T A A C G T A C G T
A C G T A C G T A C G T G C A T T A C G A G T C A C T G A G T C A C G T C G T A T A C G G A T C

SAMD4A(SAM)/Homo_sapiens-RNCMPT00063-PBM/HughesRNA

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGGCCCGCTA
-GNCCAGC--
C G T A A T C G A C T G A T G C A G T C A G T C A C T G A T G C A C G T C G T A
A C G T A C T G C A G T A G T C A G T C G T C A A C T G A G T C A C G T A C G T

Vts1p(SAM)/Saccharomyces_cerevisiae-RNCMPT00111-PBM/HughesRNA

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGGCCCGCTA
-GGCCAGCN-
C G T A A T C G A C T G A T G C A G T C A G T C A C T G A T G C A C G T C G T A
A C G T A T C G C A T G A G T C A G T C G T C A A C T G A G T C T C G A A C G T

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGGCCCGCTA
-GGCGCGCT-
C G T A A T C G A C T G A T G C A G T C A G T C A C T G A T G C A C G T C G T A
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AGGCCCGCTA
TWVGGTCCGC--
A C G T A C G T C G T A A T C G A C T G A T G C A G T C A G T C A C T G A T G C A C G T C G T A
A G C T C G A T T A C G A T C G A T C G C A G T A G T C A G T C A C T G T A G C A C G T A C G T

STP4/MA0397.1/Jaspar

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AGGCCCGCTA--
---TGCGCTATC
C G T A A T C G A C T G A T G C A G T C A G T C A C T G A T G C A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A G C T T A C G A G T C A C T G A G T C A C G T C G T A A C G T G A T C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGGCCCGCTA
AGGCCTNG--
C G T A A T C G A C T G A T G C A G T C A G T C A C T G A T G C A C G T C G T A
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AGGCCCGCTA-
ATAAAGGCGCGCGAT
A C G T A C G T A C G T A C G T C G T A A T C G A C T G A T G C A G T C A G T C A C T G A T G C A C G T C G T A A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T