Information for 23-AGCAGAAGAAGG (Motif 21)

C G T A A C T G A G T C C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C T G A G T C A C G T
p-value:1e-13
log p-value:-3.060e+01
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets111.7 +/- 37.3bp
Average Position of motif in Background101.2 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TRA2(RRM)/Drosophila_melanogaster-RNCMPT00078-PBM/HughesRNA

Match Rank:1
Score:0.73
Offset:4
Orientation:forward strand
Alignment:AGCAGAAGAAGG
----GAAGAAG-
C G T A A C T G A G T C C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C T G A C T G
A C G T A C G T A C G T A C G T T C A G C G T A C T G A A T C G C G T A C G T A A T C G A C G T

PABPN1(RRM)/Homo_sapiens-RNCMPT00157-PBM/HughesRNA

Match Rank:2
Score:0.68
Offset:3
Orientation:forward strand
Alignment:AGCAGAAGAAGG
---AGAAGAN--
C G T A A C T G A G T C C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C T G A C T G
A C G T A C G T A C G T C G T A C T A G C G T A C G T A T C A G C G T A A G T C A C G T A C G T

Unknown4/Arabidopsis-Promoters/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AGCAGAAGAAGG
-RAAGAMGAMG-
C G T A A C T G A G T C C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C T G A C T G
A C G T C T A G C T G A T G C A C T A G C G T A G T A C C T A G T G C A G T C A T A C G A C G T

REF2(RRM)/Drosophila_melanogaster-RNCMPT00059-PBM/HughesRNA

Match Rank:4
Score:0.67
Offset:6
Orientation:forward strand
Alignment:AGCAGAAGAAGG-
------AGAAGGC
C G T A A C T G A G T C C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A C T A G T C A G G T A C

Tb_0230(RRM)/Trypanosoma_brucei-RNCMPT00230-PBM/HughesRNA

Match Rank:5
Score:0.66
Offset:6
Orientation:forward strand
Alignment:AGCAGAAGAAGG--
------AGAAGGAC
C G T A A C T G A G T C C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G C G T A C G T A A C T G A C T G C T G A T G A C

OSR2/MA1646.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGCAGAAGAAGG
AAACAGAAGCAG-
A C G T C G T A A C T G A G T C C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C T G A C T G
G T C A G T C A T G C A T A G C C T G A T A C G C G T A T C G A C T A G A G T C G T C A T C A G A C G T

PEND/MA0127.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGCAGAAGAAGG
--AATAAGAAGT
C G T A A C T G A G T C C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C T G A C T G
A C G T A C G T T G C A C G T A A C G T G C T A T C G A C T A G G C T A G T C A T C A G A G C T

CUP2/MA0287.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGCAGAAGAAGG
CAGCAAAAATG--
A C G T C G T A A C T G A G T C C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C T G A C T G
A G T C C G T A A C T G G T A C C T G A T C A G C G T A C G T A C T G A C G A T C T A G A C G T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AGCAGAAGAAGG
NNNNGGGGGAAGANGG
A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C T G A C T G
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G

Adf1/dmmpmm(Bergman)/fly

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGCAGAAGAAGG
NACAGAAGCAGC
C G T A A C T G A G T C C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C T G A C T G
C A G T C T A G A G T C C T A G A C T G G T A C C T A G A C T G A T C G C G T A A C T G A G T C