Information for 23-ATCTTATTTCAG (Motif 21)

C G T A A C G T A T G C C G A T A C G T C G T A A C G T A C G T A C G T A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C G T A C G T A C G T A A C G T C G T A C G T A A T C G C G T A A C G T
p-value:1e-16
log p-value:-3.812e+01
Information Content per bp:1.960
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif11.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets88.4 +/- 70.3bp
Average Position of motif in Background105.5 +/- 71.5bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA6/MA1104.2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ATCTTATTTCAG
TTATCTTATCTTT-
A C G T A C G T C G T A A C G T A T G C C G A T A C G T C G T A A C G T A C G T A C G T A G T C C G T A A C T G
G C A T G C A T G C T A A G C T A T G C G C A T G C A T C G T A G C A T G A T C G C A T G A C T G C A T A C G T

SIX2/MA1119.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ATCTTATTTCAG--
GTATCAGGTTTCAGNN
A C G T A C G T C G T A A C G T A T G C C G A T A C G T C G T A A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C G T
C T A G C A G T T G C A G C A T G A T C C G T A C A T G C T A G G A C T C A G T C G A T G T A C G C T A A C T G C G A T C G A T

YRR1/MA0439.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ATCTTATTTCAG-
--CTTATCTCCGC
C G T A A C G T A T G C C G A T A C G T C G T A A C G T A C G T A C G T A G T C C G T A A C T G A C G T
A C G T A C G T T A G C G A C T G C A T C G T A G C A T G A T C A G C T A G T C A G T C C T A G A G T C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ATCTTATTTCAG
GKMTCADRTTWC--
A C G T A C G T C G T A A C G T A T G C C G A T A C G T C G T A A C G T A C G T A C G T A G T C C G T A A C T G
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATCTTATTTCAG
GKVTCADRTTWC--
A C G T A C G T C G T A A C G T A T G C C G A T A C G T C G T A A C G T A C G T A C G T A G T C C G T A A C T G
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T

GLN3(MacIsaac)/Yeast

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ATCTTATTTCAG
TATCTTATCT---
A C G T C G T A A C G T A T G C C G A T A C G T C G T A A C G T A C G T A C G T A G T C C G T A A C T G
A G C T C G T A A G C T T G A C G A C T A G C T C T G A A G C T A G T C C A G T A C G T A C G T A C G T

HuR(RRM)/Homo_sapiens-RNCMPT00032-PBM/HughesRNA

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ATCTTATTTCAG
---TTATTTT--
C G T A A C G T A T G C C G A T A C G T C G T A A C G T A C G T A C G T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T C G T A C A G T A C G T A C G T A C G T A C G T A C G T

DIG1/DIG1_YPD/32-STE12(Harbison)/Yeast

Match Rank:8
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:ATCTTATTTCAG
----TGTTTCA-
C G T A A C G T A T G C C G A T A C G T C G T A A C G T A C G T A C G T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A G C T A T C G A G C T G A C T C A G T A G T C C G T A A C G T

Mecom/MA0029.1/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ATCTTATTTCAG
TNTTATCTTATCTT--
A C G T A C G T A C G T A C G T C G T A A C G T A T G C C G A T A C G T C G T A A C G T A C G T A C G T A G T C C G T A A C T G
A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T A C G T A C G T

STE12(MacIsaac)/Yeast

Match Rank:10
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:ATCTTATTTCAG
----TGTTTCA-
C G T A A C G T A T G C C G A T A C G T C G T A A C G T A C G T A C G T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T G A C T C T A G A G C T A G C T G A C T A G T C T C G A A C G T