p-value: | 1e-6 |
log p-value: | -1.429e+01 |
Information Content per bp: | 1.857 |
Number of Target Sequences with motif | 13.0 |
Percentage of Target Sequences with motif | 3.38% |
Number of Background Sequences with motif | 278.9 |
Percentage of Background Sequences with motif | 0.58% |
Average Position of motif in Targets | 99.6 +/- 58.6bp |
Average Position of motif in Background | 103.6 +/- 62.5bp |
Strand Bias (log2 ratio + to - strand density) | 0.4 |
Multiplicity (# of sites on avg that occur together) | 1.08 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PABPC3(RRM)/Homo_sapiens-RNCMPT00153-PBM/HughesRNA
Match Rank: | 1 |
Score: | 0.75 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CATCGGTTTT- ----GGTTTTC |
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PH0044.1_Homez/Jaspar
Match Rank: | 2 |
Score: | 0.73 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CATCGGTTTT--- AAAACATCGTTTTTAAG |
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MYB70/MA1393.2/Jaspar
Match Rank: | 3 |
Score: | 0.71 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CATCGGTTTT NTAACGGTTAN |
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AT1G76870/MA1367.1/Jaspar
Match Rank: | 4 |
Score: | 0.71 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CATCGGTTTT---- TNCCGGTTTTNNTT |
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ONECUT2/MA0756.1/Jaspar
Match Rank: | 5 |
Score: | 0.69 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CATCGGTTTT-- ATTATCGATTTTTT |
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MYB73(MYB)/col-MYB73-DAP-Seq(GSE60143)/Homer
Match Rank: | 6 |
Score: | 0.69 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CATCGGTTTT--- NDHDDCNGTTDNNNN |
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prd/dmmpmm(Down)/fly
Match Rank: | 7 |
Score: | 0.68 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CATCGGTTTT ---CAGTTT- |
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MYB81(MYB)/col-MYB81-DAP-Seq(GSE60143)/Homer
Match Rank: | 8 |
Score: | 0.68 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CATCGGTTTT NNWAWCSGTTWN |
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ONECUT3/MA0757.1/Jaspar
Match Rank: | 9 |
Score: | 0.67 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CATCGGTTTT-- NTTATTGATTTTTT |
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GRHL1/MA0647.1/Jaspar
Match Rank: | 10 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CATCGGTTTT NAAACCGGTTTT |
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