Information for 3-GTGTTT (Motif 7)

A C T G A C G T A C T G A C G T A C G T C G A T
Reverse Opposite:
C G T A C G T A C G T A A G T C C G T A A G T C
p-value:1e-3
log p-value:-7.938e+00
Information Content per bp:1.935
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif47.93%
Number of Background Sequences with motif15534.4
Percentage of Background Sequences with motif32.70%
Average Position of motif in Targets97.7 +/- 53.7bp
Average Position of motif in Background100.3 +/- 65.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

mirr/MA0233.1/Jaspar

Match Rank:1
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:GTGTTT
-TGTTT
A C T G A C G T A C T G A C G T A C G T C G A T
A C G T A C G T A C T G A C G T G C A T C G A T

ara/MA0210.1/Jaspar

Match Rank:2
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:GTGTTT
-TGTTA
A C T G A C G T A C T G A C G T A C G T C G A T
A C G T A C G T A C T G A C G T C G A T G C T A

caup/MA0217.1/Jaspar

Match Rank:3
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:GTGTTT
-TGTTA
A C T G A C G T A C T G A C G T A C G T C G A T
A C G T A C G T A C T G A C G T G C A T G C T A

Mirr/dmmpmm(Noyes_hd)/fly

Match Rank:4
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-GTGTTT---
NNTGTTTTTT
A C G T A C T G A C G T A C T G A C G T A C G T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G A C G T G C A T C G A T A C G T G A C T C G A T

daf-16/MA1446.1/Jaspar

Match Rank:5
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--GTGTTT----
NNGTGTTTACNN
A C G T A C G T A C T G A C G T A C T G A C G T A C G T C G A T A C G T A C G T A C G T A C G T
C G A T G A C T C A T G G A C T C T A G C G A T C A G T A C G T C T G A A G T C G C T A G C A T

slp1/MA0458.1/Jaspar

Match Rank:6
Score:0.81
Offset:0
Orientation:forward strand
Alignment:GTGTTT-----
TTGTTTACATT
A C T G A C G T A C T G A C G T A C G T C G A T A C G T A C G T A C G T A C G T A C G T
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C T C G A G A C T C G A T

slp1/dmmpmm(Noyes)/fly

Match Rank:7
Score:0.81
Offset:0
Orientation:forward strand
Alignment:GTGTTT-----
NTGTTTACATT
A C T G A C G T A C T G A C G T A C G T C G A T A C G T A C G T A C G T A C G T A C G T
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C T C G A G A C T C G A T

ara/dmmpmm(Noyes_hd)/fly

Match Rank:8
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-GTGTTT---
NNTGTTATTN
A C G T A C T G A C G T A C T G A C G T A C G T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G A C G T C G A T G C T A C G A T A C G T G A C T

Caup/dmmpmm(Noyes_hd)/fly

Match Rank:9
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-GTGTTT---
NNTGTTATTG
A C G T A C T G A C G T A C T G A C G T A C G T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G A C G T G C A T G C T A G C A T G C A T C A T G

BRUNOL4(RRM)/Homo_sapiens-RNCMPT00004-PBM/HughesRNA

Match Rank:10
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-GTGTTT
TGTGTGT
A C G T A C T G A C G T A C T G A C G T A C G T C G A T
A C G T A C T G A C G T A C T G A C G T A C T G A C G T