Information for 1-TAGTTGCAGAKRCT (Motif 1)

G A C T C G T A A C T G C A G T C G A T T A C G G T A C C G T A A T C G G T C A C A T G T C A G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C G T A C A C G T A T G C A C G T A C T G A G T C C G T A G C T A T A G C A C G T C T G A
p-value:1e-8
log p-value:-1.866e+01
Information Content per bp:1.724
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif8.47%
Number of Background Sequences with motif55.7
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets94.0 +/- 55.5bp
Average Position of motif in Background92.1 +/- 58.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CG14718(RRM)/Drosophila_melanogaster-RNCMPT00006-PBM/HughesRNA

Match Rank:1
Score:0.63
Offset:5
Orientation:forward strand
Alignment:TAGTTGCAGAKRCT
-----CCAGATGN-
G A C T C G T A A C T G C A G T C G A T T A C G G T A C C G T A A T C G G T C A C A T G T C A G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G T A C A G T C C G T A A C T G C G T A A C G T A T C G T A G C A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TAGTTGCAGAKRCT
----AGCAGCTGCT
G A C T C G T A A C T G C A G T C G A T T A C G G T A C C G T A A T C G G T C A C A T G T C A G A G T C A C G T
A C G T A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TAGTTGCAGAKRCT
----TCCAGATGTT
G A C T C G T A A C T G C A G T C G A T T A C G G T A C C G T A A T C G G T C A C A T G T C A G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T

Ptf1a/MA1618.1/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TAGTTGCAGAKRCT--
---AAACAGATGTTTA
G A C T C G T A A C T G C A G T C G A T T A C G G T A C C G T A A T C G G T C A C A T G T C A G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T G C A T G C A G A T C T C G A A C T G T G C A G A C T C T A G A C G T A G C T A C G T G T C A

HAND2/MA1638.1/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TAGTTGCAGAKRCT
----ACCAGATGGC
G A C T C G T A A C T G C A G T C G A T T A C G G T A C C G T A A T C G G T C A C A T G T C A G A G T C A C G T
A C G T A C G T A C G T A C G T C T G A T G A C A T G C T C G A A C T G T C G A A G C T T C A G A C T G G A T C

Tal1

Match Rank:6
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TAGTTGCAGAKRCT
------CAGATG--
G A C T C G T A A C T G C A G T C G A T T A C G G T A C C G T A A T C G G T C A C A T G T C A G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TAGTTGCAGAKRCT---
NNNNAGCAGCTGCTGAN
G A C T C G T A A C T G C A G T C G A T T A C G G T A C C G T A A T C G G T C A C A T G T C A G A G T C A C G T A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TAGTTGCAGAKRCT-----
----AGATGCTRCTRCCHT
G A C T C G T A A C T G C A G T C G A T T A C G G T A C C G T A A T C G G T C A C A T G T C A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TAGTTGCAGAKRCT
--SSRGCAGCTGCH
G A C T C G T A A C T G C A G T C G A T T A C G G T A C C G T A A T C G G T C A C A T G T C A G A G T C A C G T
A C G T A C G T T A C G T A C G C T A G T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A C T

LHY(Myb)/Seedling-LHY-ChIP-Seq(GSE52175)/Homer

Match Rank:10
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:TAGTTGCAGAKRCT---
-------AGATATTTHT
G A C T C G T A A C T G C A G T C G A T T A C G G T A C C G T A A T C G G T C A C A T G T C A G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A A G C T A G C T G C A T G C T A G C A T