Information for 4-TCATCGCG (Motif 8)

A C G T A G T C C T G A A C G T A G T C C T A G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C C T A G G T C A A G C T A C T G C G T A
p-value:1e-3
log p-value:-8.678e+00
Information Content per bp:1.857
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif10.81%
Number of Background Sequences with motif982.6
Percentage of Background Sequences with motif2.11%
Average Position of motif in Targets116.4 +/- 51.3bp
Average Position of motif in Background95.4 +/- 76.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TOD6/MA0350.1/Jaspar

Match Rank:1
Score:0.78
Offset:-9
Orientation:forward strand
Alignment:---------TCATCGCG----
AGGCACAGCTCATCGCGTTTT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T G A A C G T A G T C C T A G A G T C A C T G A C G T A C G T A C G T A C G T
C G T A A C T G A C T G G T A C C G T A G A T C C G T A A T C G T A G C A C G T A G T C C G T A A C G T A G T C C A T G T A G C T A C G G A C T G A C T G C A T C A G T

CDC5(MYB)/Arabidopsis thaliana/AthaMap

Match Rank:2
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---TCATCGCG
GGCTCAGCGCG
A C G T A C G T A C G T A C G T A G T C C T G A A C G T A G T C C T A G A G T C A C T G
T C A G T A C G A G T C G A C T G A T C C G T A C A T G T A G C T A C G A T G C T A C G

CDC5/MA0579.1/Jaspar

Match Rank:3
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---TCATCGCG
GGCTCAGCGCG
A C G T A C G T A C G T A C G T A G T C C T G A A C G T A G T C C T A G A G T C A C T G
T C A G T A C G A G T C G A C T G A T C C G T A C A T G T A G C T A C G A T G C T A C G

TOD6?/SacCer-Promoters/Homer

Match Rank:4
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---TCATCGCG
AKCTCATCGC-
A C G T A C G T A C G T A C G T A G T C C T G A A C G T A G T C C T A G A G T C A C T G
G T C A A C T G T A G C A C G T A T G C T C G A C A G T T G A C C A T G G T A C A C G T

CHA4(MacIsaac)/Yeast

Match Rank:5
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TCATCGCG
CTCATCGCA
A C G T A C G T A G T C C T G A A C G T A G T C C T A G A G T C A C T G
G A T C C A G T A T G C T C G A A G C T A G T C A C T G A G T C C G T A

DOT6/MA0351.1/Jaspar

Match Rank:6
Score:0.74
Offset:-9
Orientation:forward strand
Alignment:---------TCATCGCG----
TTCTGCACCTCATCGCATCCT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T G A A C G T A G T C C T A G A G T C A C T G A C G T A C G T A C G T A C G T
C G A T A C G T A G T C A C G T C A T G A G T C C G T A A T G C T A G C A C G T A T G C C G T A C A G T A G T C C A T G T G A C T G C A G A C T A T G C A G T C C A G T

RBP1-LIKE(RRM)/Drosophila_melanogaster-RNCMPT00127-PBM/HughesRNA

Match Rank:7
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TCATCGCG
ATCAACG--
A C G T A C G T A G T C C T G A A C G T A G T C C T A G A G T C A C T G
C G T A C G A T A G T C C G T A C G T A A G T C C T A G A C G T A C G T

RSC3/MA0374.1/Jaspar

Match Rank:8
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TCATCGCG
-NNGCGCG
A C G T A G T C C T G A A C G T A G T C C T A G A G T C A C T G
A C G T A T G C A T G C T C A G A G T C A C T G A G T C T A C G

MBP1/MA0329.1/Jaspar

Match Rank:9
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TCATCGCG-
--NNCGCGT
A C G T A G T C C T G A A C G T A G T C C T A G A G T C A C T G A C G T
A C G T A C G T A C G T C G T A A T G C C T A G A G T C A C T G G A C T

FUS(RRM)/Homo_sapiens-RNCMPT00018-PBM/HughesRNA

Match Rank:10
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TCATCGCG--
---GCGCGCA
A C G T A G T C C T G A A C G T A G T C C T A G A G T C A C T G A C G T A C G T
A C G T A C G T A C G T C T A G A G T C A C T G A G T C A C T G G A T C C G T A