Information for 9-AGCTGTCA (Motif 19)

C G T A A C T G A T G C A G C T T C A G A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G G T C A A G T C C T G A A T C G A G T C A C G T
p-value:1e-7
log p-value:-1.827e+01
Information Content per bp:1.881
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif17.83%
Number of Background Sequences with motif3458.7
Percentage of Background Sequences with motif7.60%
Average Position of motif in Targets108.7 +/- 53.9bp
Average Position of motif in Background102.0 +/- 63.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0169.1_Tgif1/Jaspar

Match Rank:1
Score:0.90
Offset:-4
Orientation:reverse strand
Alignment:----AGCTGTCA-----
NNNCAGCTGTCAATATN
A C G T A C G T A C G T A C G T C G T A A C T G A T G C A G C T T C A G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

PH0170.1_Tgif2/Jaspar

Match Rank:2
Score:0.89
Offset:-4
Orientation:forward strand
Alignment:----AGCTGTCA----
AACTAGCTGTCAATAC
A C G T A C G T A C G T A C G T C G T A A C T G A T G C A G C T T C A G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

unc-62/MA0918.1/Jaspar

Match Rank:3
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-AGCTGTCA---
GAGCTGTCATTT
A C G T C G T A A C T G A T G C A G C T T C A G A C G T A G T C C G T A A C G T A C G T A C G T
A C T G C G T A T A C G G T A C A C G T A C T G A C G T G T A C C G T A A G C T A C G T A C G T

PH0102.1_Meis1/Jaspar

Match Rank:4
Score:0.87
Offset:-4
Orientation:forward strand
Alignment:----AGCTGTCA----
AACGAGCTGTCAATAC
A C G T A C G T A C G T A C G T C G T A A C T G A T G C A G C T T C A G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

PH0104.1_Meis2/Jaspar

Match Rank:5
Score:0.85
Offset:-4
Orientation:forward strand
Alignment:----AGCTGTCA----
AAAGACCTGTCAATAC
A C G T A C G T A C G T A C G T C G T A A C T G A T G C A G C T T C A G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

bZIP52/MA1343.1/Jaspar

Match Rank:6
Score:0.85
Offset:-5
Orientation:reverse strand
Alignment:-----AGCTGTCA-
TNACCAGCTGTCAN
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A T G C A G C T T C A G A C G T A G T C C G T A A C G T
C G A T C A T G T G C A G T A C T G A C T C G A T A C G A G T C A C G T A C T G A C G T G T A C C T G A G C T A

PH0105.1_Meis3/Jaspar

Match Rank:7
Score:0.85
Offset:-4
Orientation:forward strand
Alignment:----AGCTGTCA----
AATTACCTGTCAATAC
A C G T A C G T A C G T A C G T C G T A A C T G A T G C A G C T T C A G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

PH0140.1_Pknox1/Jaspar

Match Rank:8
Score:0.84
Offset:-4
Orientation:forward strand
Alignment:----AGCTGTCA----
AAAGACCTGTCAATCC
A C G T A C G T A C G T A C G T C G T A A C T G A T G C A G C T T C A G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:AGCTGTCA-
-GCTGTCAA
C G T A A C T G A T G C A G C T T C A G A C G T A G T C C G T A A C G T
A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.82
Offset:-4
Orientation:forward strand
Alignment:----AGCTGTCA----
AAGCACCTGTCAATAT
A C G T A C G T A C G T A C G T C G T A A C T G A T G C A G C T T C A G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T