Information for 23-AGCTCWSTCTAC (Motif 22)

T G C A C T A G A G T C A C G T A G T C C G A T A T G C A G C T A G T C A C G T C T G A A G T C
Reverse Opposite:
A C T G A G C T C G T A A C T G C T G A T A C G G C T A A C T G G T C A A C T G A G T C A C G T
p-value:1e-22
log p-value:-5.144e+01
Information Content per bp:1.809
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets118.6 +/- 51.2bp
Average Position of motif in Background65.0 +/- 57.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AGCTCWSTCTAC
--CTCTCTCY--
T G C A C T A G A G T C A C G T A G T C C G A T A T G C A G C T A G T C A C G T C T G A A G T C
A C G T A C G T A G T C A G C T A G T C A C G T A G T C A G C T A G T C G A T C A C G T A C G T

Trl/MA0205.2/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGCTCWSTCTAC-
-TCTCTCTCTTNN
T G C A C T A G A G T C A C G T A G T C C G A T A T G C A G C T A G T C A C G T C T G A A G T C A C G T
A C G T A G C T A G T C A C G T G A T C A C G T T A G C G C A T G T A C C G A T A G C T A G C T A G T C

Trl/dmmpmm(Pollard)/fly

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGCTCWSTCTAC
TTGCTCTCTC---
A C G T T G C A C T A G A G T C A C G T A G T C C G A T A T G C A G C T A G T C A C G T C T G A A G T C
A G C T A G C T C A T G A G T C C A G T G T A C C G A T A T G C A G C T A G T C A C G T A C G T A C G T

Trl/dmmpmm(Bigfoot)/fly

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGCTCWSTCTAC
TTNCTCTCTCTCT--
A C G T A C G T A C G T T G C A C T A G A G T C A C G T A G T C C G A T A T G C A G C T A G T C A C G T C T G A A G T C
G A C T C A G T A C G T A G T C C A G T A T G C C A G T A G T C A G C T G T A C G A C T A G T C C G A T A C G T A C G T

GAGA-repeat/Arabidopsis-Promoters/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGCTCWSTCTAC
--CTCTCTCTCY
T G C A C T A G A G T C A C G T A G T C C G A T A T G C A G C T A G T C A C G T C T G A A G T C
A C G T A C G T A T G C G C A T T A G C C G A T T A G C G C A T T A G C G C A T A T G C G A C T

Tb_0252(RRM)/Trypanosoma_brucei-RNCMPT00252-PBM/HughesRNA

Match Rank:6
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:AGCTCWSTCTAC-
------ATCTACT
T G C A C T A G A G T C A C G T A G T C C G A T A T G C A G C T A G T C A C G T C T G A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T A G T C A C G T C G T A A G T C C G A T

Trl/dmmpmm(Down)/fly

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGCTCWSTCTAC
GCTCTCTCTCTC-
A C G T T G C A C T A G A G T C A C G T A G T C C G A T A T G C A G C T A G T C A C G T C T G A A G T C
C A T G G A T C A C G T G A T C C A G T A G T C A G C T G T A C C A G T A G T C A C G T A G T C A C G T

BPC1(BBRBPC)/colamp-BPC1-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGCTCWSTCTAC
TTCTCTCTCYTC
T G C A C T A G A G T C A C G T A G T C C G A T A T G C A G C T A G T C A C G T C T G A A G T C
G C A T G A C T G T A C A C G T A G T C G C A T A G T C G C A T A T G C G A T C C G A T G T A C

SeqBias: GA-repeat

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGCTCWSTCTAC
-TCTCTCTCTC-
T G C A C T A G A G T C A C G T A G T C C G A T A T G C A G C T A G T C A C G T C T G A A G T C
A C G T A G C T A G T C A G C T A G T C A G C T A G T C A G C T A G T C A G C T A G T C A C G T

RBM28(RRM)/Homo_sapiens-RNCMPT00049-PBM/HughesRNA

Match Rank:10
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:AGCTCWSTCTAC--
-------TCTACTC
T G C A C T A G A G T C A C G T A G T C C G A T A T G C A G C T A G T C A C G T C T G A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A G T C A C G T C G T A A G T C C G A T A G T C