Information for 16-GGAVTTTTAAAC (Motif 16)

A C T G A C T G C G T A T G A C A C G T A C G T C G A T C G A T G T C A C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C G T G T A C A G T C
p-value:1e-9
log p-value:-2.156e+01
Information Content per bp:1.841
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif4.35%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.3 +/- 44.1bp
Average Position of motif in Background147.2 +/- 37.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GGAVTTTTAAAC
NNATTGGACTTTNGNN-
A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A T G A C A C G T A C G T C G A T C G A T G T C A C G T A C G T A A G T C
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C A C G T

Unknown6/Drosophila-Promoters/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GGAVTTTTAAAC
--AATTTTAAAA
A C T G A C T G C G T A T G A C A C G T A C G T C G A T C G A T G T C A C G T A C G T A A G T C
A C G T A C G T C G T A G C T A C G A T A C G T A G C T A G C T C T G A G T C A C G T A G C T A

At2g41835(C2H2)/col-At2g41835-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GGAVTTTTAAAC
----TTTTCAAA
A C T G A C T G C G T A T G A C A C G T A C G T C G A T C G A T G T C A C G T A C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C G T A C G T A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GGAVTTTTAAAC--
----TTTGAAACCG
A C T G A C T G C G T A T G A C A C G T A C G T C G A T C G A T G T C A C G T A C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

AT-GTL1/MA1661.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGAVTTTTAAAC--
--NNTTTTAACCNT
A C T G A C T G C G T A T G A C A C G T A C G T C G A T C G A T G T C A C G T A C G T A A G T C A C G T A C G T
A C G T A C G T G C T A G C A T G C A T G C A T C G A T G C A T G C T A G T C A G A T C G A T C C G T A G C A T

TCX2(CPP)/colamp-TCX2-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGAVTTTTAAAC-
-NNWWTTYRAAHN
A C T G A C T G C G T A T G A C A C G T A C G T C G A T C G A T G T C A C G T A C G T A A G T C A C G T
A C G T G C A T A T C G C G T A C G A T A C G T A C G T A G C T C T A G C G T A C G T A G A T C G C T A

TSO1(CPP)/col-TSO1-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGAVTTTTAAAC
-RAATTTRAAW-
A C T G A C T G C G T A T G A C A C G T A C G T C G A T C G A T G T C A C G T A C G T A A G T C
A C G T T C G A C T G A C G T A G C A T C G A T A G C T T C G A T G C A T G C A G C A T A C G T

dHNF4(NR)/Fly-HNF4-ChIP-Seq(GSE73675)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGAVTTTTAAAC
AKTGGACTTTGGACC
A C G T A C G T A C G T A C T G A C T G C G T A T G A C A C G T A C G T C G A T C G A T G T C A C G T A C G T A A G T C
T C G A A C G T G A C T T A C G T C A G G T C A G T A C A C G T C G A T A C G T C T A G T C A G G T C A G T A C A G T C

LYS14/MA0325.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGAVTTTTAAAC
CCGGAATT------
A C G T A C G T A C T G A C T G C G T A T G A C A C G T A C G T C G A T C G A T G T C A C G T A C G T A A G T C
T A G C A T G C A C T G A C T G C G T A C G T A C G A T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

ct/MA0218.1/Jaspar

Match Rank:10
Score:0.59
Offset:6
Orientation:forward strand
Alignment:GGAVTTTTAAAC
------TTGAAC
A C T G A C T G C G T A T G A C A C G T A C G T C G A T C G A T G T C A C G T A C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C G T A A T G C