p-value: | 1e-10 |
log p-value: | -2.524e+01 |
Information Content per bp: | 1.554 |
Number of Target Sequences with motif | 9.0 |
Percentage of Target Sequences with motif | 0.60% |
Number of Background Sequences with motif | 8.2 |
Percentage of Background Sequences with motif | 0.02% |
Average Position of motif in Targets | 120.4 +/- 40.6bp |
Average Position of motif in Background | 110.1 +/- 19.6bp |
Strand Bias (log2 ratio + to - strand density) | 0.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PABPC3(RRM)/Homo_sapiens-RNCMPT00153-PBM/HughesRNA
Match Rank: | 1 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GTCTTCCTCAGTAW GGTTTTC-------- |
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Tb_0253(RRM)/Trypanosoma_brucei-RNCMPT00253-PBM/HughesRNA
Match Rank: | 2 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GTCTTCCTCAGTAW -TTTTTCT------ |
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TRA2(RRM)/Drosophila_melanogaster-RNCMPT00078-PBM/HughesRNA
Match Rank: | 3 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GTCTTCCTCAGTAW --CTTCTTC----- |
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RLR1/RLR1_YPD/[](Harbison)/Yeast
Match Rank: | 4 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GTCTTCCTCAGTAW ATTTTCTTCTTT-- |
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eor-1/MA0543.1/Jaspar
Match Rank: | 5 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GTCTTCCTCAGTAW TCTCTGCGTCTCTNN |
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GCR1/Literature(Harbison)/Yeast
Match Rank: | 6 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GTCTTCCTCAGTAW GGCTTCCAC----- |
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Pp_0229(RRM)/Physcomitrella_patens-RNCMPT00229-PBM/HughesRNA
Match Rank: | 7 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTCTTCCTCAGTAW TGTTTTT-------- |
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Initiator/Drosophila-Promoters/Homer
Match Rank: | 8 |
Score: | 0.55 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | GTCTTCCTCAGTAW ------NTCAGTYG |
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PRDM1/MA0508.3/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GTCTTCCTCAGTAW TTCTTTCTCTT--- |
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POU6F1(var.2)/MA1549.1/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GTCTTCCTCAGTAW ----NNCTCATTAT |
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