Information for 19-AAGGCGAATT (Motif 18)

C G T A C G T A A C T G A C T G A G T C A C T G C G T A G T C A A G C T C G A T
Reverse Opposite:
C G T A C T G A A C G T A C G T A G T C C T A G A G T C A G T C C G A T A C G T
p-value:1e-9
log p-value:-2.301e+01
Information Content per bp:1.884
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif2.41%
Number of Background Sequences with motif64.6
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets96.5 +/- 46.9bp
Average Position of motif in Background101.0 +/- 77.5bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELB/MA1117.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AAGGCGAATT-
NNGGGGAATNC
C G T A C G T A A C T G A C T G A G T C A C T G C G T A G T C A A G C T C G A T A C G T
A T G C G T A C A T C G C A T G C A T G C T A G C T G A G C T A G C A T G A C T G A T C

RO3G_00049(RRM)/Rhizopus_oryzae-RNCMPT00205-PBM/HughesRNA

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AAGGCGAATT
-AGGGGAA--
C G T A C G T A A C T G A C T G A G T C A C T G C G T A G T C A A G C T C G A T
A C G T C T G A C A T G A C T G A C T G A C T G C T G A C G T A A C G T A C G T

STB1/STB1_YPD/1-SWI4,1-SWI6(Harbison)/Yeast

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAGGCGAATT
AAACGCGAAA-
A C G T C G T A C G T A A C T G A C T G A G T C A C T G C G T A G T C A A G C T C G A T
T C G A C T G A C T G A A G T C T C A G T G A C T A C G T C G A T G C A G C T A A C G T

SWI4/MA0401.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AAGGCGAATT
-ACGCGAAA-
C G T A C G T A A C T G A C T G A G T C A C T G C G T A G T C A A G C T C G A T
A C G T C G T A A G T C C T A G A G T C A C T G C G T A C G T A C G T A A C G T

LIN28A(CSD,Znf)/Homo_sapiens-RNCMPT00036-PBM/HughesRNA

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AAGGCGAATT
-NGGAGAA--
C G T A C G T A A C T G A C T G A G T C A C T G C G T A G T C A A G C T C G A T
A C G T G T A C A C T G A C T G C G T A A C T G C G T A C T G A A C G T A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAGGCGAATT-
AAAGRGGAAGTG
A C G T C G T A C G T A A C T G A C T G A G T C A C T G C G T A G T C A A G C T C G A T A C G T
C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G

ttk/MA0460.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAGGCGAATT
AAGGATAAT-
C G T A C G T A A C T G A C T G A G T C A C T G C G T A G T C A A G C T C G A T
T G C A C G T A A C T G A C T G C G T A A G C T C G T A C G T A A G C T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAGGCGAATT--
TTAAGAGGAAGTTA
A C G T A C G T C G T A C G T A A C T G A C T G A G T C A C T G C G T A G T C A A G C T C G A T A C G T A C G T
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C

YY2/MA0748.2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAGGCGAATT
AGATGGCGGCG-
A C G T A C G T C G T A C G T A A C T G A C T G A G T C A C T G C G T A G T C A A G C T C G A T
G T C A T A C G T C G A A G C T T A C G C T A G G A T C A T C G T A C G G T A C T A C G A C G T

NDD1(MacIsaac)/Yeast

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAGGCGAATT
AAAGGGGAAA-
A C G T C G T A C G T A A C T G A C T G A G T C A C T G C G T A G T C A A G C T C G A T
T C G A C T G A C T G A T C A G C T A G C T A G A T C G T G C A T C G A C T G A A C G T