Information for 9-MAAAAAGCAATW (Motif 9)

G T A C C G T A G T C A T G C A C G T A C T G A A T C G G T A C T C G A C T G A A C G T C G A T
Reverse Opposite:
G C T A G T C A A G C T A G C T C A T G A T G C G A C T G C A T A C G T A C G T A C G T C A T G
p-value:1e-23
log p-value:-5.374e+01
Information Content per bp:1.679
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif5.90%
Number of Background Sequences with motif139.6
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets109.5 +/- 51.1bp
Average Position of motif in Background96.0 +/- 57.6bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AZF1/MA0277.1/Jaspar

Match Rank:1
Score:0.83
Offset:1
Orientation:forward strand
Alignment:MAAAAAGCAATW
-AAAAAGAAA--
G T A C C G T A G T C A T G C A C G T A C T G A A T C G G T A C T C G A C T G A A C G T C G A T
A C G T C G T A C G T A C G T A G T C A C T G A A C T G G T C A C G T A C G T A A C G T A C G T

AT2G28810(C2C2dof)/colamp-AT2G28810-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.80
Offset:0
Orientation:forward strand
Alignment:MAAAAAGCAATW
VAAAAAGTWA--
G T A C C G T A G T C A T G C A C G T A C T G A A T C G G T A C T C G A C T G A A C G T C G A T
T A C G T C G A C G T A C G T A C G T A C T G A A C T G A C G T C G T A T C G A A C G T A C G T

Hnrnpr(RRM)/Xenopus_tropicalis-RNCMPT00289-PBM/HughesRNA

Match Rank:3
Score:0.80
Offset:0
Orientation:forward strand
Alignment:MAAAAAGCAATW
AAAAAAG-----
G T A C C G T A G T C A T G C A C G T A C T G A A T C G G T A C T C G A C T G A A C G T C G A T
G T C A C G T A C G T A C G T A C G T A G T C A A C T G A C G T A C G T A C G T A C G T A C G T

At3g45610(C2C2dof)/col-At3g45610-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:MAAAAAGCAATW
SAAAAAGTWA--
G T A C C G T A G T C A T G C A C G T A C T G A A T C G G T A C T C G A C T G A A C G T C G A T
A T G C C G T A C G T A C G T A C G T A C G T A A C T G A C G T C G A T C T G A A C G T A C G T

BBX31(Orphan)/col-BBX31-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.79
Offset:0
Orientation:forward strand
Alignment:MAAAAAGCAATW
NAAAAAGTDA--
G T A C C G T A G T C A T G C A C G T A C T G A A T C G G T A C T C G A C T G A A C G T C G A T
T C G A C T G A C G T A C G T A C G T A C G T A A C T G A C G T C G A T C T G A A C G T A C G T

dof24(C2C2dof)/col-dof24-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:MAAAAAGCAATW
CAAAAAGKWA--
G T A C C G T A G T C A T G C A C G T A C T G A A T C G G T A C T C G A C T G A A C G T C G A T
A G T C C T G A C G T A C G T A C G T A C G T A A C T G A C G T C G A T T C G A A C G T A C G T

Syncrip(RRM)/Xenopus_tropicalis-RNCMPT00281-PBM/HughesRNA

Match Rank:7
Score:0.78
Offset:0
Orientation:forward strand
Alignment:MAAAAAGCAATW
CAAAAAG-----
G T A C C G T A G T C A T G C A C G T A C T G A A T C G G T A C T C G A C T G A A C G T C G A T
G T A C G T C A C G T A C G T A C G T A C G T A C A T G A C G T A C G T A C G T A C G T A C G T

CPEB2(RRM)/Homo_sapiens-RNCMPT00012-PBM/HughesRNA

Match Rank:8
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:MAAAAAGCAATW
AAAAAAG-----
G T A C C G T A G T C A T G C A C G T A C T G A A T C G G T A C T C G A C T G A A C G T C G A T
G T C A C G T A C G T A C G T A C G T A C G T A C T A G A C G T A C G T A C G T A C G T A C G T

OBP3(C2C2dof)/col-OBP3-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:MAAAAAGCAATW
-AAAAAGTWRN-
G T A C C G T A G T C A T G C A C G T A C T G A A T C G G T A C T C G A C T G A A C G T C G A T
A C G T C T G A C G T A C G T A C G T A C G T A A C T G A G C T C G T A C T G A G C T A A C G T

AT1G47655(C2C2dof)/colamp-AT1G47655-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:MAAAAAGCAATW
SAAAAAGTDR--
G T A C C G T A G T C A T G C A C G T A C T G A A T C G G T A C T C G A C T G A A C G T C G A T
T A G C T G C A C G T A C G T A C G T A C G T A A C T G A G C T C G T A C T A G A C G T A C G T