Information for 2-CAGATC (Motif 6)

G T A C C G T A A C T G C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A G T C C G A T A C T G
p-value:1e-3
log p-value:-8.006e+00
Information Content per bp:1.896
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif37.19%
Number of Background Sequences with motif10962.8
Percentage of Background Sequences with motif23.08%
Average Position of motif in Targets103.1 +/- 53.3bp
Average Position of motif in Background99.0 +/- 65.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZmHOX2a(2)(HD-HOX)/Zea mays/AthaMap

Match Rank:1
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:CAGATC-
CAGATCA
G T A C C G T A A C T G C G T A A C G T A G T C A C G T
T G A C T G C A A C T G C G T A A C G T A G T C G C T A

ECM23/MA0293.1/Jaspar

Match Rank:2
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-CAGATC----
AAAGATCTAAA
A C G T G T A C C G T A A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C G T
T G C A T G C A T G C A C T A G C G T A C G A T A G T C A G C T G C T A T C G A T G C A

GATA10/MA1013.1/Jaspar

Match Rank:3
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:CAGATC--
CAGATCTA
G T A C C G T A A C T G C G T A A C G T A G T C A C G T A C G T
A G T C T C G A A C T G C G T A A C G T A G T C A G C T G T C A

GATA11/MA1014.1/Jaspar

Match Rank:4
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:CAGATC--
CAGATCTA
G T A C C G T A A C T G C G T A A C G T A G T C A C G T A C G T
T A G C C G T A A C T G C G T A A C G T A G T C A G C T G C T A

GAT4/MA0302.1/Jaspar

Match Rank:5
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-CAGATC----
AAAGATCTAAA
A C G T G T A C C G T A A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C G T
T C G A G C T A C T G A C T A G C G T A A C G T A G T C G A C T T C G A T G C A G T C A

GATA14(C2C2gata)/col-GATA14-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:CAGATC----
CAGATCTGRT
G T A C C G T A A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C G T
A G T C C T G A T C A G T G C A A G C T A G T C A G C T T C A G C T G A C G A T

GATA8/MA1017.1/Jaspar

Match Rank:7
Score:0.87
Offset:0
Orientation:forward strand
Alignment:CAGATC---
CAGATCTAG
G T A C C G T A A C T G C G T A A C G T A G T C A C G T A C G T A C G T
A T G C T G C A T C A G C G T A G A C T A G T C A G C T T C G A T C A G

GATA20(C2C2gata)/colamp-GATA20-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.87
Offset:-2
Orientation:reverse strand
Alignment:--CAGATC--
KNHNGATCNA
A C G T A C G T G T A C C G T A A C T G C G T A A C G T A G T C A C G T A C G T
C A G T G T A C G C A T G A T C T C A G C T G A C G A T A G T C C T A G C G T A

GATA15(C2C2gata)/col-GATA15-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-CAGATC-
KATGATCA
A C G T G T A C C G T A A C T G C G T A A C G T A G T C A C G T
C A G T G C T A G C A T T A C G C T G A C A G T T A G C C T G A

AGP1(GATA)/Nicotiana tabacum/AthaMap

Match Rank:10
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-CAGATC---
TCAGATCTAC
A C G T G T A C C G T A A C T G C G T A A C G T A G T C A C G T A C G T A C G T
G A C T A G T C C G T A A C T G C G T A A C G T A G T C A G C T C T G A A C G T