Information for 3-ACTGGATAAACC (Motif 3)

C G T A A G T C A C G T A C T G A C T G C G T A A C G T C G T A C G T A C G T A A T G C A G T C
Reverse Opposite:
C T A G A T C G A C G T A C G T A C G T C G T A A C G T G T A C A G T C C G T A A C T G A C G T
p-value:1e-26
log p-value:-6.012e+01
Information Content per bp:1.930
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif3.20%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.9 +/- 22.3bp
Average Position of motif in Background98.9 +/- 59.9bp
Strand Bias (log2 ratio + to - strand density)3.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AT5G61620(MYBrelated)/colamp-AT5G61620-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:ACTGGATAAACC
--TGGATAAG--
C G T A A G T C A C G T A C T G A C T G C G T A A C G T C G T A C G T A C G T A A T G C A G T C
A C G T A C G T G C A T T C A G A C T G C G T A A C G T G T C A C G T A C T A G A C G T A C G T

At5g47390(MYBrelated)/col-At5g47390-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:ACTGGATAAACC
--TGGATAAG--
C G T A A G T C A C G T A C T G A C T G C G T A A C G T C G T A C G T A C G T A A T G C A G T C
A C G T A C G T G A C T C T A G A C T G C G T A A C G T G T C A C G T A C A T G A C G T A C G T

KHDRBS3(KH)/Homo_sapiens-RNCMPT00034-PBM/HughesRNA

Match Rank:3
Score:0.74
Offset:4
Orientation:forward strand
Alignment:ACTGGATAAACC
----GATAAACN
C G T A A G T C A C G T A C T G A C T G C G T A A C G T C G T A C G T A C G T A A T G C A G T C
A C G T A C G T A C G T A C G T C T A G C G T A A C G T C G T A C G T A C G T A T A G C T A C G

At1g74840/MA1397.1/Jaspar

Match Rank:4
Score:0.73
Offset:0
Orientation:forward strand
Alignment:ACTGGATAAACC
AATGGATAAGG-
C G T A A G T C A C G T A C T G A C T G C G T A A C G T C G T A C G T A C G T A A T G C A G T C
C G T A C G T A G A C T C T A G A C T G C G T A A C G T G C T A C T G A C T A G C T A G A C G T

At1g74840(MYBrelated)/col100-At1g74840-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-ACTGGATAAACC
AWWTGGATAADR-
A C G T C G T A A G T C A C G T A C T G A C T G C G T A A C G T C G T A C G T A C G T A A T G C A G T C
C G T A C G A T C G T A G C A T C T A G A C T G C G T A A C G T T G C A C T G A C T A G C T G A A C G T

At1g19000(MYBrelated)/colamp-At1g19000-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.71
Offset:0
Orientation:forward strand
Alignment:ACTGGATAAACC
WWTGGATAADDT
C G T A A G T C A C G T A C T G A C T G C G T A A C G T C G T A C G T A C G T A A T G C A G T C
C G A T C G T A G C A T C T A G A C T G C G T A A C G T G T C A C G T A C T A G C T A G G C A T

AT4G00250(GeBP)/col-AT4G00250-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ACTGGATAAACC
WDTGGATAAKRT
C G T A A G T C A C G T A C T G A C T G C G T A A C G T C G T A C G T A C G T A A T G C A G T C
C G T A C G T A G A C T C T A G A C T G C G T A A C G T T C G A C T G A C A T G C T A G G C A T

AT5G56840(MYBrelated)/colamp-AT5G56840-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.70
Offset:2
Orientation:forward strand
Alignment:ACTGGATAAACC
--TGGATAAGGT
C G T A A G T C A C G T A C T G A C T G C G T A A C G T C G T A C G T A C G T A A T G C A G T C
A C G T A C G T G C A T C T A G C T A G C G T A A G C T C G T A C T G A C A T G C T A G G C A T

At1g19000/MA1400.1/Jaspar

Match Rank:9
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ACTGGATAAACC-
AAATGGATAAGGTT
A C G T C G T A A G T C A C G T A C T G A C T G C G T A A C G T C G T A C G T A C G T A A T G C A G T C A C G T
C G T A C G T A C G T A G A C T C T A G A C T G C G T A A C G T G T C A C T G A C A T G T C A G G C A T C G A T

KHDRBS2(KH)/Homo_sapiens-RNCMPT00185-PBM/HughesRNA

Match Rank:10
Score:0.68
Offset:4
Orientation:forward strand
Alignment:ACTGGATAAACC
----GATAAAA-
C G T A A G T C A C G T A C T G A C T G C G T A A C G T C G T A C G T A C G T A A T G C A G T C
A C G T A C G T A C G T A C G T C T A G G T C A A G C T C G T A C G T A C G T A G T C A A C G T