Information for 10-GCTGGAGATGAT (Motif 10)

A C T G A G T C A C G T A C T G A C T G C T G A A C T G C G T A C G A T A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T G T A C C G T A A C G T A G T C A G C T A G T C A G T C C G T A A C T G A G T C
p-value:1e-23
log p-value:-5.311e+01
Information Content per bp:1.953
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.83%
Number of Background Sequences with motif7.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets149.4 +/- 28.9bp
Average Position of motif in Background98.0 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RBM47(RRM)/Gallus_gallus-RNCMPT00279-PBM/HughesRNA

Match Rank:1
Score:0.67
Offset:6
Orientation:forward strand
Alignment:GCTGGAGATGAT-
------GATGATN
A C T G A G T C A C G T A C T G A C T G C T G A A C T G C G T A C G A T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A T C G C G T A C G A T C G A T

RIN(RRM)/Drosophila_melanogaster-RNCMPT00138-PBM/HughesRNA

Match Rank:2
Score:0.67
Offset:5
Orientation:forward strand
Alignment:GCTGGAGATGAT-
-----AGATGATG
A C T G A G T C A C G T A C T G A C T G C T G A A C T G C G T A C G A T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T A G C G T A A C G T A C T G C T G A G C A T C T A G

Rbm47(RRM)/Xenopus_tropicalis-RNCMPT00280-PBM/HughesRNA

Match Rank:3
Score:0.66
Offset:6
Orientation:forward strand
Alignment:GCTGGAGATGAT-
------GATGATN
A C T G A G T C A C G T A C T G A C T G C T G A A C T G C G T A C G A T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A T C G C G T A C G A T G A C T

ACE2/MA0267.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCTGGAGATGAT
TGCTGGT------
A C G T A C T G A G T C A C G T A C T G A C T G C T G A A C T G C G T A C G A T A C T G C G T A A C G T
A C G T A C T G A G T C A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SAMD4A(SAM)/Homo_sapiens-RNCMPT00063-PBM/HughesRNA

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCTGGAGATGAT
GCTGGNC-----
A C T G A G T C A C G T A C T G A C T G C T G A A C T G C G T A C G A T A C T G C G T A A C G T
A C T G A G T C C A G T A C T G A C T G G T C A G T A C A C G T A C G T A C G T A C G T A C G T

AGL42/MA1201.1/Jaspar

Match Rank:6
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:GCTGGAGATGAT-
------GATGATG
A C T G A G T C A C G T A C T G A C T G C T G A A C T G C G T A C G A T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A C G T A C T G C T G A A C G T A C T G

AT2G31460(REMB3)/col-AT2G31460-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GCTGGAGATGAT
WNWARWDGAAATGAT
A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C T G C T G A A C T G C G T A C G A T A C T G C G T A A C G T
G C A T C G T A G C A T C G T A T C G A C G T A C T G A A C T G C G T A C G T A C G T A A C G T A C T G G T C A G C A T

SRSF2(RRM)/Homo_sapiens-RNCMPT00072-PBM/HughesRNA

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCTGGAGATGAT
--AGGAGANG--
A C T G A G T C A C G T A C T G A C T G C T G A A C T G C G T A C G A T A C T G C G T A A C G T
A C G T A C G T C G T A A C T G A C T G C G T A A C T G C G T A C T A G C T A G A C G T A C G T

ZKSCAN5/MA1652.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCTGGAGATGAT--
GGAGGAGGTGAGAA
A C T G A G T C A C G T A C T G A C T G C T G A A C T G C G T A C G A T A C T G C G T A A C G T A C G T A C G T
C T A G T C A G C T G A C T A G T C A G T G C A C T A G C T A G A G C T T C A G T C G A C A T G T C G A T C G A

SWI5(MacIsaac)/Yeast

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCTGGAGATGAT
TGCTGGTT-----
A C G T A C T G A G T C A C G T A C T G A C T G C T G A A C T G C G T A C G A T A C T G C G T A A C G T
A C G T T C A G A G T C A C G T C A T G T C A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T