Information for 7-AGCCTGTGGA (Motif 6)

G T C A T A C G G T A C A G T C C G A T A C T G G A C T C T A G C T A G C G T A
Reverse Opposite:
A C G T G A T C A G T C C T G A A G T C C G T A C T A G C A T G A T G C A C G T
p-value:1e-18
log p-value:-4.368e+01
Information Content per bp:1.780
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif3.24%
Number of Background Sequences with motif290.9
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets83.2 +/- 44.4bp
Average Position of motif in Background105.0 +/- 64.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MET28/MA0332.1/Jaspar

Match Rank:1
Score:0.76
Offset:3
Orientation:forward strand
Alignment:AGCCTGTGGA
---CTGTGG-
G T C A T A C G G T A C A G T C C G A T A C T G G A C T C T A G C T A G C G T A
A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C T G A C T G A C G T

MET28(MacIsaac)/Yeast

Match Rank:2
Score:0.76
Offset:3
Orientation:forward strand
Alignment:AGCCTGTGGA
---CTGTGG-
G T C A T A C G G T A C A G T C C G A T A C T G G A C T C T A G C T A G C G T A
A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C T G A C T G A C G T

MET31/Literature(Harbison)/Yeast

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AGCCTGTGGA
AAACTGTGG-
G T C A T A C G G T A C A G T C C G A T A C T G G A C T C T A G C T A G C G T A
C G T A C G T A C G T A A G T C A C G T A C T G A C G T A C T G A C T G A C G T

MET32/Literature(Harbison)/Yeast

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AGCCTGTGGA
AAACTGTGG-
G T C A T A C G G T A C A G T C C G A T A C T G G A C T C T A G C T A G C G T A
C G T A C G T A C G T A A G T C A C G T A C T G A C G T A C T G A C T G A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.71
Offset:5
Orientation:reverse strand
Alignment:AGCCTGTGGA-
-----GTGGAT
G T C A T A C G G T A C A G T C C G A T A C T G G A C T C T A G C T A G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.68
Offset:2
Orientation:forward strand
Alignment:AGCCTGTGGA----
--NNTGTGGATTSS
G T C A T A C G G T A C A G T C C G A T A C T G G A C T C T A G C T A G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

RDR1/MA0360.1/Jaspar

Match Rank:7
Score:0.67
Offset:4
Orientation:forward strand
Alignment:AGCCTGTGGA--
----TGCGGAAC
G T C A T A C G G T A C A G T C C G A T A C T G G A C T C T A G C T A G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G A G T C A C T G A C T G C G T A C G T A G T A C

MET4/MA0335.1/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGCCTGTGGA
-AACTGTGG-
G T C A T A C G G T A C A G T C C G A T A C T G G A C T C T A G C T A G C G T A
A C G T C G T A T C G A A G T C A C G T A C T G A C G T A C T G A C T G A C G T

MET4(MacIsaac)/Yeast

Match Rank:9
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGCCTGTGGA
-AACTGTGG-
G T C A T A C G G T A C A G T C C G A T A C T G G A C T C T A G C T A G C G T A
A C G T C G T A T C G A A G T C A C G T A C T G A C G T A C T G A C T G A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:10
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:AGCCTGTGGA-----
----TGTGGATTNNN
G T C A T A C G G T A C A G T C C G A T A C T G G A C T C T A G C T A G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A