Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| PABPC1(?)/MEL-PABC1-CLIP-Seq(GSE69755)/Homer | 1e-16 | -3.768e+01 | 0.0000 | 175.0 | 71.72% | 21067.7 | 45.18% | motif file (matrix) |
svg |
2 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-5 | -1.154e+01 | 0.0049 | 64.0 | 26.23% | 7193.0 | 15.43% | motif file (matrix) |
svg |
3 |
| At3g24120(G2like)/col-At3g24120-DAP-Seq(GSE60143)/Homer | 1e-4 | -9.690e+00 | 0.0208 | 126.0 | 51.64% | 18320.2 | 39.29% | motif file (matrix) |
svg |
4 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-3 | -8.802e+00 | 0.0378 | 79.0 | 32.38% | 10330.2 | 22.15% | motif file (matrix) |
svg |
5 |
| SeqBias: GA-repeat | 1e-3 | -8.758e+00 | 0.0378 | 153.0 | 62.70% | 23796.5 | 51.03% | motif file (matrix) |
svg |
6 |
| GATA1(C2C2gata)/colamp-GATA1-DAP-Seq(GSE60143)/Homer | 1e-3 | -7.985e+00 | 0.0571 | 22.0 | 9.02% | 1852.5 | 3.97% | motif file (matrix) |
svg |
7 |
| caudal(Homeobox)/Drosophila-Embryos-ChIP-Chip(modEncode)/Homer | 1e-3 | -7.950e+00 | 0.0571 | 60.0 | 24.59% | 7458.0 | 15.99% | motif file (matrix) |
svg |
8 |
| SeqBias: TA-repeat | 1e-3 | -7.299e+00 | 0.0850 | 179.0 | 73.36% | 29601.9 | 63.48% | motif file (matrix) |
svg |
9 |
| FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer | 1e-3 | -7.058e+00 | 0.0962 | 66.0 | 27.05% | 8710.5 | 18.68% | motif file (matrix) |
svg |
10 |
| GATA11(C2C2gata)/col-GATA11-DAP-Seq(GSE60143)/Homer | 1e-2 | -6.867e+00 | 0.1048 | 21.0 | 8.61% | 1885.2 | 4.04% | motif file (matrix) |
svg |
11 |
| HDG1(Homeobox)/col100-HDG1-DAP-Seq(GSE60143)/Homer | 1e-2 | -6.530e+00 | 0.1334 | 58.0 | 23.77% | 7559.6 | 16.21% | motif file (matrix) |
svg |
12 |
| Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer | 1e-2 | -6.488e+00 | 0.1334 | 124.0 | 50.82% | 19215.2 | 41.21% | motif file (matrix) |
svg |
13 |
| PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer | 1e-2 | -6.468e+00 | 0.1334 | 170.0 | 69.67% | 28136.3 | 60.34% | motif file (matrix) |
svg |
14 |
| Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer | 1e-2 | -6.387e+00 | 0.1334 | 106.0 | 43.44% | 15944.8 | 34.20% | motif file (matrix) |
svg |
15 |
| RAV1(RAV)/colamp-RAV1-DAP-Seq(GSE60143)/Homer | 1e-2 | -6.168e+00 | 0.1405 | 57.0 | 23.36% | 7512.9 | 16.11% | motif file (matrix) |
svg |
16 |
| GATA12(C2C2gata)/col-GATA12-DAP-Seq(GSE60143)/Homer | 1e-2 | -5.641e+00 | 0.2231 | 25.0 | 10.25% | 2659.0 | 5.70% | motif file (matrix) |
svg |
17 |
| Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer | 1e-2 | -5.566e+00 | 0.2265 | 40.0 | 16.39% | 4954.3 | 10.62% | motif file (matrix) |
svg |
18 |
| Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer | 1e-2 | -5.547e+00 | 0.2265 | 58.0 | 23.77% | 7892.3 | 16.93% | motif file (matrix) |
svg |
19 |
| PHV(HB)/col-PHV-DAP-Seq(GSE60143)/Homer | 1e-2 | -5.215e+00 | 0.2878 | 35.0 | 14.34% | 4269.8 | 9.16% | motif file (matrix) |
svg |
20 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-2 | -5.203e+00 | 0.2878 | 77.0 | 31.56% | 11286.2 | 24.20% | motif file (matrix) |
svg |
21 |
| At2g01060(G2like)/colamp-At2g01060-DAP-Seq(GSE60143)/Homer | 1e-2 | -5.188e+00 | 0.2878 | 116.0 | 47.54% | 18342.7 | 39.34% | motif file (matrix) |
svg |
22 |
| PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer | 1e-2 | -5.160e+00 | 0.2878 | 12.0 | 4.92% | 974.9 | 2.09% | motif file (matrix) |
svg |
23 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-2 | -5.052e+00 | 0.2878 | 39.0 | 15.98% | 4948.4 | 10.61% | motif file (matrix) |
svg |
24 |
| MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer | 1e-2 | -4.989e+00 | 0.2878 | 16.0 | 6.56% | 1519.1 | 3.26% | motif file (matrix) |
svg |
25 |
| At5g66730(C2H2)/colamp-At5g66730-DAP-Seq(GSE60143)/Homer | 1e-2 | -4.936e+00 | 0.2891 | 20.0 | 8.20% | 2085.7 | 4.47% | motif file (matrix) |
svg |
26 |
| Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer | 1e-2 | -4.865e+00 | 0.2983 | 90.0 | 36.89% | 13749.6 | 29.49% | motif file (matrix) |
svg |
27 |
| Unknown4/Arabidopsis-Promoters/Homer | 1e-2 | -4.807e+00 | 0.3046 | 27.0 | 11.07% | 3146.8 | 6.75% | motif file (matrix) |
svg |
28 |
| AT2G40260(G2like)/colamp-AT2G40260-DAP-Seq(GSE60143)/Homer | 1e-2 | -4.803e+00 | 0.3046 | 74.0 | 30.33% | 10937.1 | 23.46% | motif file (matrix) |
svg |
29 |
| Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer | 1e-2 | -4.652e+00 | 0.3310 | 45.0 | 18.44% | 6054.7 | 12.98% | motif file (matrix) |
svg |
30 |
| SPL1(SBP)/colamp-SPL1-DAP-Seq(GSE60143)/Homer | 1e-2 | -4.633e+00 | 0.3310 | 75.0 | 30.74% | 11191.0 | 24.00% | motif file (matrix) |
svg |
31 |
| IDD4(C2H2)/col-IDD4-DAP-Seq(GSE60143)/Homer | 1e-2 | -4.630e+00 | 0.3310 | 60.0 | 24.59% | 8585.7 | 18.41% | motif file (matrix) |
svg |