Information for 13-AAATAA (Motif 28)

C G T A C G T A C G T A A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A C G T A C G T A C G T
p-value:1e-1
log p-value:-4.564e+00
Information Content per bp:1.530
Number of Target Sequences with motif312.0
Percentage of Target Sequences with motif20.74%
Number of Background Sequences with motif8564.0
Percentage of Background Sequences with motif18.37%
Average Position of motif in Targets81.7 +/- 68.0bp
Average Position of motif in Background101.2 +/- 61.0bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.35
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HuR(RRM)/Homo_sapiens-RNCMPT00032-PBM/HughesRNA

Match Rank:1
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-AAATAA
AAAATAA
A C G T C G T A C G T A C G T A A C G T C G T A C G T A
T C G A C G T A C G T A G T C A G C A T C G T A C G T A

Antp/dmmpmm(Bigfoot)/fly

Match Rank:2
Score:0.84
Offset:1
Orientation:forward strand
Alignment:AAATAA-
-AATAAT
C G T A C G T A C G T A A C G T C G T A C G T A A C G T
A C G T T G C A C G T A A C G T C T G A C G T A C G A T

eve/dmmpmm(Down)/fly

Match Rank:3
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:AAATAA-
AAATNAT
C G T A C G T A C G T A A C G T C G T A C G T A A C G T
G T C A G T C A G C T A C G A T G C A T C T G A G C A T

Tv_0226(RRM)/Trichomonas_vaginalis-RNCMPT00226-PBM/HughesRNA

Match Rank:4
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-AAATAA-
NCAATAAN
A C G T C G T A C G T A C G T A A C G T C G T A C G T A A C G T
T G C A A G T C C G T A C G T A A C G T C G T A C G T A C A T G

PABPC1(?)/MEL-PABC1-CLIP-Seq(GSE69755)/Homer

Match Rank:5
Score:0.82
Offset:0
Orientation:forward strand
Alignment:AAATAA----
HAATAAAGNN
C G T A C G T A C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T
G A T C G C T A C G T A C G A T C G T A G T C A C T G A A T C G C G A T A C G T

bin/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--AAATAA
ATAAATA-
A C G T A C G T C G T A C G T A C G T A A C G T C G T A C G T A
C T A G A C G T C G T A C G T A C G T A A C G T C G T A A C G T

zen/dmmpmm(Bigfoot)/fly

Match Rank:7
Score:0.80
Offset:1
Orientation:forward strand
Alignment:AAATAA-
-AATAAA
C G T A C G T A C G T A A C G T C G T A C G T A A C G T
A C G T G T C A C G T A A C G T C G T A C G T A C G T A

ap/dmmpmm(Bigfoot)/fly

Match Rank:8
Score:0.80
Offset:1
Orientation:forward strand
Alignment:AAATAA-
-AATNAT
C G T A C G T A C G T A A C G T C G T A C G T A A C G T
A C G T C G T A C G T A A C G T C G A T C T G A C G A T

ZC3H14(Znf)/Homo_sapiens-RNCMPT00086-PBM/HughesRNA

Match Rank:9
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:AAATAA-
AAACAAA
C G T A C G T A C G T A A C G T C G T A C G T A A C G T
C G T A G T C A G T C A G T A C G T C A C G T A G T C A

ap/dmmpmm(SeSiMCMC)/fly

Match Rank:10
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:AAATAA--
-AATNATA
C G T A C G T A C G T A A C G T C G T A C G T A A C G T A C G T
A C G T C G T A C G T A A G C T G C T A C T G A G C A T T C G A