Information for 21-GTCGTCTACT (Motif 20)

A C T G A C G T A G T C C T A G A G C T A G T C A C G T C G T A G T A C A G C T
Reverse Opposite:
C T G A A C T G G C A T G T C A C T A G C T G A A G T C A C T G C G T A A G T C
p-value:1e-7
log p-value:-1.769e+01
Information Content per bp:1.803
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif5.46%
Number of Background Sequences with motif417.3
Percentage of Background Sequences with motif0.92%
Average Position of motif in Targets90.4 +/- 49.1bp
Average Position of motif in Background99.4 +/- 70.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SRSF7(RRM,Znf)/Homo_sapiens-RNCMPT00073-PBM/HughesRNA

Match Rank:1
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--GTCGTCTACT
NCGTCGTC----
A C G T A C G T A C T G A C G T A G T C C T A G A G C T A G T C A C G T C G T A G T A C A G C T
A G T C A G T C A C T G A C G T A G T C A C T G A C G T A G T C A C G T A C G T A C G T A C G T

RBM45(RRM)/Homo_sapiens-RNCMPT00241-PBM/HughesRNA

Match Rank:2
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-GTCGTCTACT
TGTCGTC----
A C G T A C T G A C G T A G T C C T A G A G C T A G T C A C G T C G T A G T A C A G C T
A C G T A C T G A G C T G T A C A T C G A C G T A G T C A C G T A C G T A C G T A C G T

PB0179.1_Sp100_2/Jaspar

Match Rank:3
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---GTCGTCTACT--
TCCGTCGCTTAAAAG
A C G T A C G T A C G T A C T G A C G T A G T C C T A G A G C T A G T C A C G T C G T A G T A C A G C T A C G T A C G T
A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

IDD2/MA1373.1/Jaspar

Match Rank:4
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----GTCGTCTACT-
TTTTGTCGTTTTNTN
A C G T A C G T A C G T A C G T A C T G A C G T A G T C C T A G A G C T A G T C A C G T C G T A G T A C A G C T A C G T
C G A T A G C T A C G T A G C T A C T G A C G T A G T C A C T G A C G T A G C T C G A T G C A T T A C G A G C T C A T G

RSF1(RRM)/Drosophila_melanogaster-RNCMPT00061-PBM/HughesRNA

Match Rank:5
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GTCGTCTACT
TCGTCGT-----
A C G T A C G T A C T G A C G T A G T C C T A G A G C T A G T C A C G T C G T A G T A C A G C T
A G C T A G T C A C T G A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T

IDD5/MA1370.1/Jaspar

Match Rank:6
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----GTCGTCTACT-
TTTTTGTCGTTTTGTG
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C T A G A G C T A G T C A C G T C G T A G T A C A G C T A C G T
C G A T C G A T A G C T A C G T A G C T A C T G A G C T A G T C A C T G A C G T A G C T C G A T G C A T A T C G G A C T C A T G

NUC(C2H2)/col-NUC-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----GTCGTCTACT-
TTTTGTCGTTTTBTD
A C G T A C G T A C G T A C G T A C T G A C G T A G T C C T A G A G C T A G T C A C G T C G T A G T A C A G C T A C G T
G C A T A G C T A G C T A G C T A C T G A C G T A G T C A C T G A C G T G A C T C G A T G C A T A T C G A G C T C A T G

Rbm4.3(RRM)/Danio_rerio-RNCMPT00248-PBM/HughesRNA

Match Rank:8
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GTCGTCTACT
TCGTCGTN----
A C G T A C G T A C T G A C G T A G T C C T A G A G C T A G T C A C G T C G T A G T A C A G C T
A C G T A G T C A C T G A G C T A G T C A C T G A G C T A G C T A C G T A C G T A C G T A C G T

FXR1(KH)/Homo_sapiens-RNCMPT00161-PBM/HughesRNA

Match Rank:9
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GTCGTCTACT
TTGTCATT----
A C G T A C G T A C T G A C G T A G T C C T A G A G C T A G T C A C G T C G T A G T A C A G C T
A C G T A G C T A C T G A G C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

CG2950(KH)/Drosophila_melanogaster-RNCMPT00007-PBM/HughesRNA

Match Rank:10
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GTCGTCTACT
NTCGTTG---
A C T G A C G T A G T C C T A G A G C T A G T C A C G T C G T A G T A C A G C T
A C G T A C G T A G T C A C T G A C G T A G C T A C T G A C G T A C G T A C G T