Information for 24-CGTGCTGATC (Motif 19)

A G T C A C T G A C G T A C T G A G T C A G C T A C T G C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A G T C C T G A A C T G A G T C G T C A A G T C A C T G
p-value:1e-7
log p-value:-1.732e+01
Information Content per bp:1.950
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif15.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets70.9 +/- 35.6bp
Average Position of motif in Background95.0 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CGTGCTGATC
CCTGCTGAGH
A G T C A C T G A C G T A C T G A G T C A G C T A C T G C G T A A C G T A G T C
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

SWI5/Literature(Harbison)/Yeast

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CGTGCTGATC
--GGCTGA--
A G T C A C T G A C G T A C T G A G T C A G C T A C T G C G T A A C G T A G T C
A C G T A C G T A C G T A C T G A G T C A C G T A C T G C T A G A C G T A C G T

GATA15(C2C2gata)/col-GATA15-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:CGTGCTGATC---
-----TGATCATM
A G T C A C T G A C G T A C T G A G T C A G C T A C T G C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A T C G G T C A G A C T A T G C C G T A C G A T G T C A

ZmHOX2a(2)(HD-HOX)/Zea mays/AthaMap

Match Rank:4
Score:0.66
Offset:5
Orientation:forward strand
Alignment:CGTGCTGATC--
-----TGATCTG
A G T C A C T G A C G T A C T G A G T C A G C T A C T G C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C T G C G T A A C G T A G T C A C G T A C T G

GATA20(C2C2gata)/colamp-GATA20-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CGTGCTGATC--
--KNHNGATCNA
A G T C A C T G A C G T A C T G A G T C A G C T A C T G C G T A A C G T A G T C A C G T A C G T
A C G T A C G T C A G T G T A C G C A T G A T C T C A G C T G A C G A T A G T C C T A G C G T A

GATA15/MA1016.1/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CGTGCTGATC--
---TATGATCAG
A G T C A C T G A C G T A C T G A G T C A G C T A C T G C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A G C T C T G A G A C T T C A G C G T A G C A T A T G C C T G A T C A G

YPR013C/MA0434.1/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CGTGCTGATC-
--TGTAGATCA
A G T C A C T G A C G T A C T G A G T C A G C T A C T G C G T A A C G T A G T C A C G T
A C G T A C G T A G C T A C T G G A C T G T C A C T A G C G T A A C G T A G T C G T C A

ACE2/ACE2_YPD/2-SWI5(Harbison)/Yeast

Match Rank:8
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CGTGCTGATC
--TGCTGGT-
A G T C A C T G A C G T A C T G A G T C A G C T A C T G C G T A A C G T A G T C
A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C T G A C G T A C G T

ZNF341/MA1655.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CGTGCTGATC--
NNGGCTGTTCCN
A G T C A C T G A C G T A C T G A G T C A G C T A C T G C G T A A C G T A G T C A C G T A C G T
A T C G A G C T C A T G T A C G T A G C A G C T T A C G G A C T A C G T A T G C G A T C G T A C

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CGTGCTGATC
NNCCTGCTGNG-
A C G T A C G T A G T C A C T G A C G T A C T G A G T C A G C T A C T G C G T A A C G T A G T C
A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G A C G T