Information for 12-CTMTAKCCTWAM (Motif 12)

A G T C A C G T G T A C A C G T C T G A A C T G G T A C A G T C C A G T C G T A C G T A G T C A
Reverse Opposite:
A C G T A C G T C G A T G C T A A C T G A C T G G T A C A G C T G T C A A C T G C G T A A C T G
p-value:1e-22
log p-value:-5.114e+01
Information Content per bp:1.859
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif2.36%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets126.9 +/- 11.1bp
Average Position of motif in Background96.1 +/- 54.1bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HRB27C(RRM)/Drosophila_melanogaster-RNCMPT00093-PBM/HughesRNA

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CTMTAKCCTWAM
---TAACCTA--
A G T C A C G T G T A C A C G T C T G A A C T G G T A C A G T C C A G T C G T A C G T A G T C A
A C G T A C G T A C G T A G C T C G T A G C T A A G T C A G T C A C G T C G T A A C G T A C G T

HRB27C(RRM)/Drosophila_melanogaster-RNCMPT00028-PBM/HughesRNA

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CTMTAKCCTWAM
---TAACCTA--
A G T C A C G T G T A C A C G T C T G A A C T G G T A C A G T C C A G T C G T A C G T A G T C A
A C G T A C G T A C G T A G C T C G T A G C T A A G T C A G T C A C G T C G T A A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTMTAKCCTWAM
AAGATATCCTT--
A C G T A G T C A C G T G T A C A C G T C T G A A C T G G T A C A G T C C A G T C G T A C G T A G T C A
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T

ZmHOX2a(1)(HD-HOX)/Zea mays/AthaMap

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CTMTAKCCTWAM
----GTCCTAA-
A G T C A C G T G T A C A C G T C T G A A C T G G T A C A G T C C A G T C G T A C G T A G T C A
A C G T A C G T A C G T A C G T C T A G A C G T A G T C A G T C A C G T T C G A G C T A A C G T

BPC1(BBRBPC)/colamp-BPC1-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTMTAKCCTWAM
TTCTCTCTCYTC--
A C G T A C G T A G T C A C G T G T A C A C G T C T G A A C T G G T A C A G T C C A G T C G T A C G T A G T C A
G C A T G A C T G T A C A C G T A G T C G C A T A G T C G C A T A T G C G A T C C G A T G T A C A C G T A C G T

AT1G72740(MYBrelated)/colamp-AT1G72740-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTMTAKCCTWAM---
NNWWAMCCTAAHWNN
A G T C A C G T G T A C A C G T C T G A A C T G G T A C A G T C C A G T C G T A C G T A G T C A A C G T A C G T A C G T
C G T A C G A T C G A T C G T A C T G A G T C A A G T C A G T C A C G T C G T A C T G A G C A T C G A T C G A T G C T A

AT1G72740/MA1353.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTMTAKCCTWAM---
CNAAACCCTAAATCN
A G T C A C G T G T A C A C G T C T G A A C T G G T A C A G T C C A G T C G T A C G T A G T C A A C G T A C G T A C G T
T G A C C G A T C G T A C G T A C T G A T G A C G T A C A T G C G A C T C G T A C T G A G C T A G A C T G A T C G A T C

P0510F09.23/MA1030.1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTMTAKCCTWAM-
---AACCCTAGAT
A G T C A C G T G T A C A C G T C T G A A C T G G T A C A G T C C A G T C G T A C G T A G T C A A C G T
A C G T A C G T A C G T G C T A C T G A G T A C G T A C T G A C G C A T C T G A T C A G G T C A G A C T

TBP3/MA1355.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTMTAKCCTWAM-
AATTAAACCCTAATT
A C G T A C G T A G T C A C G T G T A C A C G T C T G A A C T G G T A C A G T C C A G T C G T A C G T A G T C A A C G T
G C T A G C T A G C A T C G A T C G T A G C T A C T G A G T A C A G T C A G T C A C G T C G T A C T G A G C A T G A C T

G3BP2(RRM)/Homo_sapiens-RNCMPT00021-PBM/HughesRNA

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTMTAKCCTWAM
--TCATCCT---
A G T C A C G T G T A C A C G T C T G A A C T G G T A C A G T C C A G T C G T A C G T A G T C A
A C G T A C G T G A C T G A T C C G T A A C G T A G T C A G T C C G A T A C G T A C G T A C G T