Information for 20-TCCGCGTGCAGA (Motif 20)

A C G T A G T C A T G C A C T G A G T C A C T G A C G T A C T G A G T C C T G A A C T G C G T A
Reverse Opposite:
A C G T A G T C A G C T A C T G G T A C C G T A A G T C A C T G A G T C A T C G A C T G C G T A
p-value:1e-9
log p-value:-2.279e+01
Information Content per bp:1.944
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif3.33%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets82.8 +/- 28.9bp
Average Position of motif in Background38.5 +/- 61.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CMTA3/MA0970.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TCCGCGTGCAGA
-CCGCGTTAC--
A C G T A G T C A T G C A C T G A G T C A C T G A C G T A C T G A G T C C T G A A C T G C G T A
A C G T T G A C G T A C C T A G G A T C C T A G G A C T G A C T T C G A A G T C A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TCCGCGTGCAGA--
GGGCCGTGTGCAAAAA
A C G T A C G T A C G T A G T C A T G C A C T G A G T C A C T G A C G T A C T G A G T C C T G A A C T G C G T A A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

CMTA2/MA0969.1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TCCGCGTGCAGA
AAACCGCGT-----
A C G T A C G T A C G T A G T C A T G C A C T G A G T C A C T G A C G T A C T G A G T C C T G A A C T G C G T A
C G T A G C T A C G T A T A G C G T A C T C A G G A T C C A T G A C G T A C G T A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TCCGCGTGCAGA
--TGCGTG----
A C G T A G T C A T G C A C T G A G T C A C T G A C G T A C T G A G T C C T G A A C T G C G T A
A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T

PB0111.1_Bhlhb2_2/Jaspar

Match Rank:5
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------TCCGCGTGCAGA----
ACCGCCNTCCACGTGTANNGACA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T G C A C T G A G T C A C T G A C G T A C T G A G T C C T G A A C T G C G T A A C G T A C G T A C G T A C G T
C G T A G A T C G A T C C A T G T A G C G A T C G A C T C A G T T G A C G T A C C T G A A G T C T C A G G A C T A C T G A C G T G T C A C T G A G A C T T A C G C T G A G A T C C T G A

CG33714(RRM)/Drosophila_melanogaster-RNCMPT00009-PBM/HughesRNA

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCCGCGTGCAGA
-NGGCGTG----
A C G T A G T C A T G C A C T G A G T C A C T G A C G T A C T G A G T C C T G A A C T G C G T A
A C G T A T C G A T C G A C T G A G T C A C T G A G C T A C T G A C G T A C G T A C G T A C G T

MTF1/MA0863.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TCCGCGTGCAGA
GTGCCGTGTGCAAA
A C G T A C G T A C G T A G T C A T G C A C T G A G T C A C T G A C G T A C T G A G T C C T G A A C T G C G T A
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

MYC/MA0147.3/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCCGCGTGCAGA
GGCCACGTGCCC-
A C G T A C G T A G T C A T G C A C T G A G T C A C T G A C G T A C T G A G T C C T G A A C T G C G T A
T A C G T A C G T A G C T G A C C T G A A G T C T C A G A G C T A T C G A T G C A G T C A T G C A C G T

nit-4/MA1435.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCCGCGTGCAGA
CTCCGCGGAG---
A C G T A C G T A G T C A T G C A C T G A G T C A C T G A C G T A C T G A G T C C T G A A C T G C G T A
G A T C A G C T A G T C A G T C A T C G A G T C A C T G A C T G T C G A A C T G A C G T A C G T A C G T

PHYPADRAFT_48267/MA1021.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCCGCGTGCAGA
-CCACGTGC---
A C G T A G T C A T G C A C T G A G T C A C T G A C G T A C T G A G T C C T G A A C T G C G T A
A C G T A G T C A G T C C G T A A G T C C T A G A C G T A C T G G A T C A C G T A C G T A C G T