Information for 9-ATCATGGCCACG (Motif 8)

G T C A A C G T A G T C C T G A A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C T G
Reverse Opposite:
G T A C A C T G C G A T A C T G A C T G G T A C A G T C C G T A A G C T A C T G C G T A A C G T
p-value:1e-30
log p-value:-7.091e+01
Information Content per bp:1.891
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets115.0 +/- 21.9bp
Average Position of motif in Background60.9 +/- 47.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tv_0259(RRM)/Trichomonas_vaginalis-RNCMPT00259-PBM/HughesRNA

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATCATGGCCACG
ACCATGN-----
G T C A A C G T A G T C C T G A A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C T G
C G T A A G T C A G T C C G T A A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

pho/dmmpmm(Pollard)/fly

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATCATGGCCACG
GCCGTTATGGCTTC-
A C G T A C G T A C G T G T C A A C G T A G T C C T G A A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C T G
C T A G A T G C A G T C C A T G A C G T G A C T C T G A A C G T A C T G A C T G A G T C A C G T A C G T G T A C A C G T

SKN7/MA0381.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:ATCATGGCCACG
---NTGGCC---
G T C A A C G T A G T C C T G A A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C T G
A C G T A C G T A C G T G T C A A G C T A T C G A C T G A G T C A G T C A C G T A C G T A C G T

pho/MA1460.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ATCATGGCCACG
-AAATGGCCGCC
G T C A A C G T A G T C C T G A A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C T G
A C G T G T C A C T G A T G C A A G C T A T C G A C T G G T A C A T G C C T A G G T A C A G T C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ATCATGGCCACG
--CAAGGHCANV
G T C A A C G T A G T C C T G A A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C T G
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Plagl1/MA1615.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ATCATGGCCACG---
--NNTGGCCCCAGNN
G T C A A C G T A G T C C T G A A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A T G C T A G C A G C T T A C G C A T G A T G C A T G C A G T C A T G C C G T A A T C G A T C G A T C G

RFX3/MA0798.2/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ATCATGGCCACG-
TNCCATAGCAACNN
A C G T G T C A A C G T A G T C C T G A A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C T G A C G T
G A C T C A T G A G T C G A T C G T C A A G C T C T G A C T A G G A T C C T G A T C G A G A T C T G A C T C A G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATCATGGCCACG
NTCAAGGTCA--
G T C A A C G T A G T C C T G A A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C T G
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ATCATGGCCACG--
TACCATAGCAACGGT
A C G T G T C A A C G T A G T C C T G A A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C T G A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

NR5A1/MA1540.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATCATGGCCACG
GTCAAGGTCAC-
G T C A A C G T A G T C C T G A A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C T G
A C T G G A C T A T G C C T G A C G T A A C T G A C T G G A C T A G T C C T G A G A T C A C G T