Information for 9-ACCTTCAAAAAC (Motif 9)

G T C A A G T C A G T C A C G T A G C T A G T C C G T A C G T A C G T A C G T A C T G A A G T C
Reverse Opposite:
A C T G A G C T C G A T A C G T A C G T A C G T C T A G C T G A G T C A A C T G A C T G A C G T
p-value:1e-10
log p-value:-2.462e+01
Information Content per bp:1.832
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif10.14%
Number of Background Sequences with motif76.7
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets93.7 +/- 50.6bp
Average Position of motif in Background100.2 +/- 60.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RLM1(MacIsaac)/Yeast

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ACCTTCAAAAAC
-TCTATAAATA-
G T C A A G T C A G T C A C G T A G C T A G T C C G T A C G T A C G T A C G T A C T G A A G T C
A C G T G A C T T A G C A G C T G C T A G C A T G T C A G T C A C G T A G C A T C T G A A C G T

Sf3b4(RRM)/Danio_rerio-RNCMPT00224-PBM/HughesRNA

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:ACCTTCAAAAAC
----NCAAAAG-
G T C A A G T C A G T C A C G T A G C T A G T C C G T A C G T A C G T A C G T A C T G A A G T C
A C G T A C G T A C G T A C G T C A G T A G T C C G T A C G T A C G T A C G T A A C T G A C G T

ARF18/MA1689.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ACCTTCAAAAAC
ACCCGACAAAAAT
A C G T G T C A A G T C A G T C A C G T A G C T A G T C C G T A C G T A C G T A C G T A C T G A A G T C
C G T A T A G C G A T C T G A C C T A G T C G A A T G C T G C A T C G A T C G A T C G A C G T A C G A T

E2F7/MA0758.1/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ACCTTCAAAAAC
TTTTCCCGCCAAAA--
A C G T A C G T A C G T A C G T G T C A A G T C A G T C A C G T A G C T A G T C C G T A C G T A C G T A C G T A C T G A A G T C
C G A T C G A T A G C T A G C T A T G C A T G C A G T C T C A G A G T C A T G C C G T A C G T A G C T A C G T A A C G T A C G T

Pp_0229(RRM)/Physcomitrella_patens-RNCMPT00229-PBM/HughesRNA

Match Rank:5
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:ACCTTCAAAAAC-
------AAAAACA
G T C A A G T C A G T C A C G T A G C T A G T C C G T A C G T A C G T A C G T A C T G A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A G T C A C G T A G T C A C G T A A G T C C G T A

exd/MA0222.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ACCTTCAAAAAC
--TGTCAAAN--
G T C A A G T C A G T C A C G T A G C T A G T C C G T A C G T A C G T A C G T A C T G A A G T C
A C G T A C G T A G C T C T A G A C G T A G T C C G T A C G T A G T C A C G T A A C G T A C G T

p120/dmmpmm(Pollard)/fly

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ACCTTCAAAAAC
AACATTCAATAG-
A C G T G T C A A G T C A G T C A C G T A G C T A G T C C G T A C G T A C G T A C G T A C T G A A G T C
C G T A C G T A A G T C C G T A A C G T C G A T A G T C C G T A C G T A C G A T C G T A C T A G A C G T

pan/dmmpmm(SeSiMCMC)/fly

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ACCTTCAAAAAC
--TATCAAA---
G T C A A G T C A G T C A C G T A G C T A G T C C G T A C G T A C G T A C G T A C T G A A G T C
A C G T A C G T A C G T C G T A G A C T G A T C C G T A G C T A C G T A A C G T A C G T A C G T

cad/dmmpmm(Papatsenko)/fly

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACCTTCAAAAAC
-CCATAAAAA--
G T C A A G T C A G T C A C G T A G C T A G T C C G T A C G T A C G T A C G T A C T G A A G T C
A C G T G A T C A G T C G T C A C G A T G T C A C G T A C G T A C T G A C G T A A C G T A C G T

exd/dmmpmm(Noyes_hd)/fly

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ACCTTCAAAAAC
NTTGTCAAAN--
G T C A A G T C A G T C A C G T A G C T A G T C C G T A C G T A C G T A C G T A C T G A A G T C
A C G T G C A T A G C T C T A G A C G T A G T C C G T A C G T A G T C A C G T A A C G T A C G T