Information for 12-GTGGAWGATT (Motif 9)

C U A G G C A U A C U G A C U G C G U A C G U A A C U G C U G A A C G U C G A U
Reverse Opposite:
C G U A C G U A A G C U A G U C G C A U A C G U A G U C A G U C C G U A A G U C
p-value:1e-9
log p-value:-2.185e+01
Information Content per bp:1.828
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif3.38%
Number of Background Sequences with motif139.5
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets57.9 +/- 51.4bp
Average Position of motif in Background87.5 +/- 67.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-141* MIMAT0004598 Homo sapiens miR-141* Targets (miRBase)

Match Rank:1
Score:0.73
Offset:-12
Orientation:forward strand
Alignment:------------GTGGAWGATT
TCCAACACTGTACTGGAAGATG
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U A G G C A U A C U G A C U G C G U A C G U A A C U G C U G A A C G U C G A U
A C G U A G U C A G U C C G U A C G U A A G U C C G U A A G U C A C G U A C U G A C G U C G U A A G U C A C G U A C U G A C U G C G U A C G U A A C U G C G U A A C G U A C U G

hsa-miR-154* MIMAT0000453 Homo sapiens miR-154* Targets (miRBase)

Match Rank:2
Score:0.65
Offset:-12
Orientation:forward strand
Alignment:------------GTGGAWGATT
AATAGGTCAACCGTGTATGATT
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U A G G C A U A C U G A C U G C G U A C G U A A C U G C U G A A C G U C G A U
C G U A C G U A A C G U C G U A A C U G A C U G A C G U A G U C C G U A C G U A A G U C A G U C A C U G A C G U A C U G A C G U C G U A A C G U A C U G C G U A A C G U A C G U

hsa-miR-4691-5p MIMAT0019781 Homo sapiens miR-4691-5p Targets (miRBase)

Match Rank:3
Score:0.62
Offset:-14
Orientation:forward strand
Alignment:--------------GTGGAWGATT
CCGCAGCTCATGGCCTGGAGGAC-
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U A G G C A U A C U G A C U G C G U A C G U A A C U G C U G A A C G U C G A U
A G U C A G U C A C U G A G U C C G U A A C U G A G U C A C G U A G U C C G U A A C G U A C U G A C U G A G U C A G U C A C G U A C U G A C U G C G U A A C U G A C U G C G U A A G U C A C G U

hsa-miR-2115 MIMAT0011158 Homo sapiens miR-2115 Targets (miRBase)

Match Rank:4
Score:0.61
Offset:-13
Orientation:forward strand
Alignment:-------------GTGGAWGATT
TCCATCAGGAGTCATGGAAGCT-
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U A G G C A U A C U G A C U G C G U A C G U A A C U G C U G A A C G U C G A U
A C G U A G U C A G U C C G U A A C G U A G U C C G U A A C U G A C U G C G U A A C U G A C G U A G U C C G U A A C G U A C U G A C U G C G U A C G U A A C U G A G U C A C G U A C G U

hsa-miR-487a MIMAT0002178 Homo sapiens miR-487a Targets (miRBase)

Match Rank:5
Score:0.61
Offset:-12
Orientation:forward strand
Alignment:------------GTGGAWGATT
AACTGGATGTCCCTGTATGATT
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U A G G C A U A C U G A C U G C G U A C G U A A C U G C U G A A C G U C G A U
C G U A C G U A A G U C A C G U A C U G A C U G C G U A A C G U A C U G A C G U A G U C A G U C A G U C A C G U A C U G A C G U C G U A A C G U A C U G C G U A A C G U A C G U

hsa-miR-3667-3p MIMAT0018090 Homo sapiens miR-3667-3p Targets (miRBase)

Match Rank:6
Score:0.57
Offset:-13
Orientation:forward strand
Alignment:-------------GTGGAWGATT
AAAGACCCATGGAGAGGAAGGT-
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U A G G C A U A C U G A C U G C G U A C G U A A C U G C U G A A C G U C G A U
C G U A C G U A C G U A A C U G C G U A A G U C A G U C A G U C C G U A A C G U A C U G A C U G C G U A A C U G C G U A A C U G A C U G C G U A C G U A A C U G A C U G A C G U A C G U

hsa-miR-4727-5p MIMAT0019847 Homo sapiens miR-4727-5p Targets (miRBase)

Match Rank:7
Score:0.56
Offset:-12
Orientation:forward strand
Alignment:------------GTGGAWGATT
CCACTGTGGAAGCTGGCAGAT-
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U A G G C A U A C U G A C U G C G U A C G U A A C U G C U G A A C G U C G A U
A G U C A G U C C G U A A G U C A C G U A C U G A C G U A C U G A C U G C G U A C G U A A C U G A G U C A C G U A C U G A C U G A G U C C G U A A C U G C G U A A C G U A C G U

hsa-miR-136* MIMAT0004606 Homo sapiens miR-136* Targets (miRBase)

Match Rank:8
Score:0.56
Offset:-12
Orientation:forward strand
Alignment:------------GTGGAWGATT
AGACTCATTTGAGACGATGATG
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U A G G C A U A C U G A C U G C G U A C G U A A C U G C U G A A C G U C G A U
C G U A A C U G C G U A A G U C A C G U A G U C C G U A A C G U A C G U A C G U A C U G C G U A A C U G C G U A A G U C A C U G C G U A A C G U A C U G C G U A A C G U A C U G

hsa-miR-1236 MIMAT0005591 Homo sapiens miR-1236 Targets (miRBase)

Match Rank:9
Score:0.55
Offset:-12
Orientation:forward strand
Alignment:------------GTGGAWGATT
CTGGAGAGACAAGGGGAAGAGG
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U A G G C A U A C U G A C U G C G U A C G U A A C U G C U G A A C G U C G A U
A G U C A C G U A C U G A C U G C G U A A C U G C G U A A C U G C G U A A G U C C G U A C G U A A C U G A C U G A C U G A C U G C G U A C G U A A C U G C G U A A C U G A C U G

hsa-miR-640 MIMAT0003310 Homo sapiens miR-640 Targets (miRBase)

Match Rank:10
Score:0.55
Offset:-12
Orientation:forward strand
Alignment:------------GTGGAWGATT
AGAGGCAGGTTCCTGGATCAT-
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U A G G C A U A C U G A C U G C G U A C G U A A C U G C U G A A C G U C G A U
C G U A A C U G C G U A A C U G A C U G A G U C C G U A A C U G A C U G A C G U A C G U A G U C A G U C A C G U A C U G A C U G C G U A A C G U A G U C C G U A A C G U A C G U