Information for 5-CTGGACAATGGG (Motif 5)

A G T C A C G T A C T G A C T G C G T A G T A C C G T A C G T A A C G T A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G T C A G T C C G T A A C T G
p-value:1e-15
log p-value:-3.481e+01
Information Content per bp:1.966
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif4.17%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets160.8 +/- 17.6bp
Average Position of motif in Background78.8 +/- 36.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0132.1_Hbp1_2/Jaspar

Match Rank:1
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-CTGGACAATGGG----
NNTNNACAATGGGANNN
A C G T A G T C A C G T A C T G A C T G C G T A G T A C C G T A C G T A A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:CTGGACAATGGG
--GAACAATGGN
A G T C A C G T A C T G A C T G C G T A G T A C C G T A C G T A A C G T A C T G A C T G A C T G
A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:3
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CTGGACAATGGG
VVRRAACAATGG-
A C G T A G T C A C G T A C T G A C T G C G T A G T A C C G T A C G T A A C G T A C T G A C T G A C T G
T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G A C G T

SOX13/MA1120.1/Jaspar

Match Rank:4
Score:0.72
Offset:2
Orientation:forward strand
Alignment:CTGGACAATGGG-
--AAACAATGGCA
A G T C A C G T A C T G A C T G C G T A G T A C C G T A C G T A A C G T A C T G A C T G A C T G A C G T
A C G T A C G T C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A

NFYB/MA0502.2/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CTGGACAATGGG
NTGGCCAATGAG
A G T C A C G T A C T G A C T G C G T A G T A C C G T A C G T A A C G T A C T G A C T G A C T G
A G T C A C G T C T A G T C A G G A T C G T A C G T C A T C G A C G A T T A C G T C G A T A C G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:6
Score:0.71
Offset:2
Orientation:forward strand
Alignment:CTGGACAATGGG
--RAACAATGGN
A G T C A C G T A C T G A C T G C G T A G T A C C G T A C G T A A C G T A C T G A C T G A C T G
A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

SOX2/MA0143.4/Jaspar

Match Rank:7
Score:0.71
Offset:2
Orientation:forward strand
Alignment:CTGGACAATGGG-
--AAACAATGGAA
A G T C A C G T A C T G A C T G C G T A G T A C C G T A C G T A A C G T A C T G A C T G A C T G A C G T
A C G T A C G T C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:CTGGACAATGGG
---GACAATGNN
A G T C A C G T A C T G A C T G C G T A G T A C C G T A C G T A A C G T A C T G A C T G A C T G
A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CTGGACAATGGG
---RACAAWGG-
A G T C A C G T A C T G A C T G C G T A G T A C C G T A C G T A A C G T A C T G A C T G A C T G
A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CTGGACAATGGG
-AAAACAATGG-
A G T C A C G T A C T G A C T G C G T A G T A C C G T A C G T A A C G T A C T G A C T G A C T G
A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T