Information for 15-AGACACTGAA (Motif 12)

C T G A C A T G C G T A T A G C T G C A A T G C C A G T A T C G C T G A T C G A
Reverse Opposite:
A G C T A G C T A T G C G T C A T A C G A C G T A T C G C G A T G T A C G A C T
p-value:1e-5
log p-value:-1.277e+01
Information Content per bp:1.693
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif18.03%
Number of Background Sequences with motif4042.8
Percentage of Background Sequences with motif8.67%
Average Position of motif in Targets101.6 +/- 58.9bp
Average Position of motif in Background99.5 +/- 68.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AGACACTGAA---
-GAAACTGAAACT
C T G A C A T G C G T A T A G C T G C A A T G C C A G T A T C G C T G A T C G A A C G T A C G T A C G T
A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGACACTGAA---
-GAAAGTGAAAGT
C T G A C A T G C G T A T A G C T G C A A T G C C A G T A T C G C T G A T C G A A C G T A C G T A C G T
A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

ZSCAN4/MA1155.1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGACACTGAA--
TGCACACACTGAAAA
A C G T A C G T A C G T C T G A C A T G C G T A T A G C T G C A A T G C C A G T A T C G C T G A T C G A A C G T A C G T
G A C T T C A G A T G C C G T A A G T C C G T A G A T C T G C A G T A C A C G T A C T G C G T A G T C A C T G A C T G A

Stat2/MA1623.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGACACTGAA---
AGAAACAGAAACT
C T G A C A T G C G T A T A G C T G C A A T G C C A G T A T C G C T G A T C G A A C G T A C G T A C G T
C T G A C T A G C T G A G C T A T C G A T A G C G C T A C T A G T C G A C T G A T C G A T A G C G C A T

ARG80/MA0271.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGACACTGAA
AGACGC----
C T G A C A T G C G T A T A G C T G C A A T G C C A G T A T C G C T G A T C G A
C G T A A C T G C G T A A G T C C A T G A G T C A C G T A C G T A C G T A C G T

ARG80(MacIsaac)/Yeast

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGACACTGAA
AGACGC----
C T G A C A T G C G T A T A G C T G C A A T G C C A G T A T C G C T G A T C G A
C G T A A C T G C G T A A G T C C A T G A G T C A C G T A C G T A C G T A C G T

NKX2-5/MA0063.2/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGACACTGAA--
-ACCACTCAAAA
C T G A C A T G C G T A T A G C T G C A A T G C C A G T A T C G C T G A T C G A A C G T A C G T
A C G T T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A

EIN3(EIL)/col-EIN3-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGACACTGAA---
ARATWCATTGAATYT
A C G T A C G T C T G A C A T G C G T A T A G C T G C A A T G C C A G T A T C G C T G A T C G A A C G T A C G T A C G T
C G T A C T A G C T G A C G A T C G T A G T A C C G T A A G C T G A C T C A T G G C T A C G T A A G C T G A T C G C A T

Initiator/Drosophila-Promoters/Homer

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGACACTGAA
--CRACTGAN
C T G A C A T G C G T A T A G C T G C A A T G C C A G T A T C G C T G A T C G A
A C G T A C G T T G A C C T A G C T G A G A T C A G C T A T C G T G C A C G T A

IRF1/MA0050.2/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AGACACTGAA-------
AAANNGAAAGTGAAAGTAAAN
A C G T A C G T A C G T A C G T C T G A C A T G C G T A T A G C T G C A A T G C C A G T A T C G C T G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A