Information for 19-CTGAGCTTWGTT (Motif 19)

T A G C A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C C G A T G T C A C G T A A C T G A G T C C G A T A G T C C G T A A T C G
p-value:1e-8
log p-value:-2.035e+01
Information Content per bp:1.910
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif7.25%
Number of Background Sequences with motif33.4
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets83.7 +/- 75.2bp
Average Position of motif in Background86.0 +/- 70.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CG2931(RRM)/Drosophila_melanogaster-RNCMPT00147-PBM/HughesRNA

Match Rank:1
Score:0.70
Offset:5
Orientation:reverse strand
Alignment:CTGAGCTTWGTT
-----CTTAGTT
T A G C A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G T A A C T G A C G T G C A T

SOX10/MA0442.2/Jaspar

Match Rank:2
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:CTGAGCTTWGTT--
---NNCTTTGTTNN
T A G C A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

RBM42(RRM)/Homo_sapiens-RNCMPT00151-PBM/HughesRNA

Match Rank:3
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:CTGAGCTTWGTT
-----CTTAGTT
T A G C A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C A G T A C G T C G T A A C T G A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTGAGCTTWGTT
CTGACCTTTG--
T A G C A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C G T
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.65
Offset:4
Orientation:forward strand
Alignment:CTGAGCTTWGTT--
----YCTTTGTTCC
T A G C A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

SOX4/MA0867.2/Jaspar

Match Rank:6
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CTGAGCTTWGTT-
---NCCTTTGTTC
T A G C A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A G T C G A T C C G A T A G C T A G C T T A C G C G A T A G C T G A T C

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTGAGCTTWGTT-----
TNNTCCTTTGTTCTNNT
T A G C A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

HuR(RRM)/Homo_sapiens-RNCMPT00112-PBM/HughesRNA

Match Rank:8
Score:0.63
Offset:6
Orientation:forward strand
Alignment:CTGAGCTTWGTT-
------TTTGTTT
T A G C A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTGAGCTTWGTT-----
NNNTCCTTTGTTCTNNN
T A G C A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

NCU08034(RRM)/Neurospora_crassa-RNCMPT00209-PBM/HughesRNA

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTGAGCTTWGTT
NTGTGCTA----
T A G C A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G T A A C T G A C G T A C G T
A G C T A G C T A C T G A C G T A C T G A G T C C G A T C G T A A C G T A C G T A C G T A C G T