p-value: | 1e-23 |
log p-value: | -5.384e+01 |
Information Content per bp: | 1.939 |
Number of Target Sequences with motif | 10.0 |
Percentage of Target Sequences with motif | 2.91% |
Number of Background Sequences with motif | 3.5 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 99.9 +/- 31.1bp |
Average Position of motif in Background | 100.3 +/- 54.5bp |
Strand Bias (log2 ratio + to - strand density) | 1.2 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Rbm42(RRM)/Xenopus_tropicalis-RNCMPT00282-PBM/HughesRNA
Match Rank: | 1 |
Score: | 0.67 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CAAACTACACTA -CAACTACN--- |
|
|
|
RBM28(RRM)/Homo_sapiens-RNCMPT00049-PBM/HughesRNA
Match Rank: | 2 |
Score: | 0.65 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CAAACTACACTA ---TCTACTC-- |
|
|
|
SFPQ(RRM)/Homo_sapiens-RNCMPT00177-PBM/HughesRNA
Match Rank: | 3 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CAAACTACACTA -ACACTAC---- |
|
|
|
PUM(PUF)/Drosophila_melanogaster-RNCMPT00105-PBM/HughesRNA
Match Rank: | 4 |
Score: | 0.62 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CAAACTACACTA --AATTACA--- |
|
|
|
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer
Match Rank: | 5 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CAAACTACACTA NAAACCACAG-- |
|
|
|
HNF4A/MA0114.4/Jaspar
Match Rank: | 6 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CAAACTACACTA TCCAAAGTCCAAA- |
|
|
|
HNF4G/MA0484.2/Jaspar
Match Rank: | 7 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CAAACTACACTA TCCAAAGTCCAGA- |
|
|
|
MAL13P1.35(RRM)/Plasmodium_falciparum-RNCMPT00234-PBM/HughesRNA
Match Rank: | 8 |
Score: | 0.61 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CAAACTACACTA ---ATTACAC-- |
|
|
|
HuR(?)/HEK293-HuR-CLIP-Seq(GSE87887)/Homer
Match Rank: | 9 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CAAACTACACTA CAAACCAAAV-- |
|
|
|
dHNF4(NR)/Fly-HNF4-ChIP-Seq(GSE73675)/Homer
Match Rank: | 10 |
Score: | 0.60 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CAAACTACACTA GGTCCAAAGTCCAMT- |
|
|
|