p-value: | 1e-2 |
log p-value: | -5.518e+00 |
Information Content per bp: | 1.923 |
Number of Target Sequences with motif | 14.0 |
Percentage of Target Sequences with motif | 23.73% |
Number of Background Sequences with motif | 5456.2 |
Percentage of Background Sequences with motif | 10.96% |
Average Position of motif in Targets | 80.8 +/- 50.3bp |
Average Position of motif in Background | 99.2 +/- 62.7bp |
Strand Bias (log2 ratio + to - strand density) | 0.7 |
Multiplicity (# of sites on avg that occur together) | 1.14 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RTG3/Literature(Harbison)/Yeast
Match Rank: | 1 |
Score: | 0.99 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GTGACC GTGACC |
|
|
|
NR2C1/MA1535.1/Jaspar
Match Rank: | 2 |
Score: | 0.91 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GTGACC--- NTGACCTCN |
|
|
|
MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 3 |
Score: | 0.91 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GTGACC- -TGACCT |
|
|
|
NR2C2(var.2)/MA1536.1/Jaspar
Match Rank: | 4 |
Score: | 0.88 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GTGACC-- NTGACCTN |
|
|
|
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 5 |
Score: | 0.88 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GTGACC--- -TGACCYCT |
|
|
|
EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer
Match Rank: | 6 |
Score: | 0.88 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GTGACC------- -TGACCYYTGVYN |
|
|
|
Hr46/dmmpmm(Bergman)/fly
Match Rank: | 7 |
Score: | 0.87 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GTGACC- -TGACCC |
|
|
|
usp/dmmpmm(Bergman)/fly
Match Rank: | 8 |
Score: | 0.85 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GTGACC-- CGTGACCCC |
|
|
|
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 9 |
Score: | 0.85 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GTGACC--- -TGACCTYA |
|
|
|
COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer
Match Rank: | 10 |
Score: | 0.85 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GTGACC------- -TGACCTYTGVMC |
|
|
|