Information for 21-CTGTCGTTTGTT (Motif 19)

G T A C C G A T A C T G A G C T G T A C C T A G A G C T A G C T A C G T T C A G A C G T A G C T
Reverse Opposite:
C T G A C G T A A G T C C G T A T C G A C T G A G A T C A C T G C T G A A G T C C G T A C A T G
p-value:1e-15
log p-value:-3.475e+01
Information Content per bp:1.767
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets87.8 +/- 48.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CTGTCGTTTGTT-----
TNNTCCTTTGTTCTNNT
G T A C C G A T A C T G A G C T G T A C C T A G A G C T A G C T A C G T T C A G A C G T A G C T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0061.1_Sox11_1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTGTCGTTTGTT-----
NNNTCCTTTGTTCTNNN
G T A C C G A T A C T G A G C T G T A C C T A G A G C T A G C T A C G T T C A G A C G T A G C T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

AtIDD11(C2H2)/colamp-AtIDD11-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTGTCGTTTGTT
TTTGTCGTTT---
A C G T G T A C C G A T A C T G A G C T G T A C C T A G A G C T A G C T A C G T T C A G A C G T A G C T
A G C T G A C T A C G T A C T G A C G T A G T C A C T G A C G T G C A T C G A T A C G T A C G T A C G T

HuR(RRM)/Homo_sapiens-RNCMPT00117-PBM/HughesRNA

Match Rank:4
Score:0.66
Offset:6
Orientation:forward strand
Alignment:CTGTCGTTTGTT-
------TTTGTTT
G T A C C G A T A C T G A G C T G T A C C T A G A G C T A G C T A C G T T C A G A C G T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T T C A G A C G T A G C T A C G T

HuR(RRM)/Homo_sapiens-RNCMPT00112-PBM/HughesRNA

Match Rank:5
Score:0.65
Offset:6
Orientation:forward strand
Alignment:CTGTCGTTTGTT-
------TTTGTTT
G T A C C G A T A C T G A G C T G T A C C T A G A G C T A G C T A C G T T C A G A C G T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.65
Offset:4
Orientation:forward strand
Alignment:CTGTCGTTTGTT--
----CCTTTGTTTT
G T A C C G A T A C T G A G C T G T A C C T A G A G C T A G C T A C G T T C A G A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

SOX4/MA0867.2/Jaspar

Match Rank:7
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CTGTCGTTTGTT-
---NCCTTTGTTC
G T A C C G A T A C T G A G C T G T A C C T A G A G C T A G C T A C G T T C A G A C G T A G C T A C G T
A C G T A C G T A C G T A G T C A G T C G A T C C G A T A G C T A G C T T A C G C G A T A G C T G A T C

D/MA0445.1/Jaspar

Match Rank:8
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CTGTCGTTTGTT--
---TCCATTGTTCT
G T A C C G A T A C T G A G C T G T A C C T A G A G C T A G C T A C G T T C A G A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A G C T A G T C A G T C C G T A A C G T A C G T C T A G A C G T A C G T A G T C C G A T

PB0119.1_Foxa2_2/Jaspar

Match Rank:9
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CTGTCGTTTGTT------
---NCNTTTGTTATTTNN
G T A C C G A T A C T G A G C T G T A C C T A G A G C T A G C T A C G T T C A G A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

MF0011.1_HMG_class/Jaspar

Match Rank:10
Score:0.64
Offset:6
Orientation:forward strand
Alignment:CTGTCGTTTGTT
------ATTGTT
G T A C C G A T A C T G A G C T G T A C C T A G A G C T A G C T A C G T T C A G A C G T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T