Information for 16-CCTGCTCAGGTAAC (Motif 20)

A G T C A G T C C A G T A T C G A G T C A C G T A G T C C G T A A T C G C A T G A G C T G T C A C G T A G T A C
Reverse Opposite:
C A T G C G A T A C G T C T G A G T A C A T G C A C G T T A C G T C G A C T A G A T G C G C T A C T A G C T A G
p-value:1e-10
log p-value:-2.468e+01
Information Content per bp:1.687
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.25%
Number of Background Sequences with motif139.4
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets95.9 +/- 62.5bp
Average Position of motif in Background97.4 +/- 64.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CCTGCTCAGGTAAC
--TGCCCAGNHW--
A G T C A G T C C A G T A T C G A G T C A C G T A G T C C G T A A T C G C A T G A G C T G T C A C G T A G T A C
A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTCAGGTAAC
CCCCCTGCTGTG-----
A C G T A C G T A C G T A G T C A G T C C A G T A T C G A G T C A C G T A G T C C G T A A T C G C A T G A G C T G T C A C G T A G T A C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T

Zic2/MA1629.1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTCAGGTAAC
CCCCCTGCTGTGNN---
A C G T A C G T A C G T A G T C A G T C C A G T A T C G A G T C A C G T A G T C C G T A A T C G C A T G A G C T G T C A C G T A G T A C
A G T C A G T C G A T C T A G C G T A C G A C T T C A G A T G C C A G T A T C G C G A T A C T G G T C A A C T G A C G T A C G T A C G T

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCTGCTCAGGTAAC
NNCCTGCTGNG-----
A C G T A C G T A G T C A G T C C A G T A T C G A G T C A C G T A G T C C G T A A T C G C A T G A G C T G T C A C G T A G T A C
A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G A C G T A C G T A C G T A C G T A C G T

grh/dmmpmm(Papatsenko)/fly

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCTGCTCAGGTAAC
TACCTGCT--------
A C G T A C G T A G T C A G T C C A G T A T C G A G T C A C G T A G T C C G T A A T C G C A T G A G C T G T C A C G T A G T A C
C A G T C G T A A G T C A G T C A C G T A C T G A T G C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PFI1695c(RRM)/Plasmodium_falciparum-RNCMPT00203-PBM/HughesRNA

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCTGCTCAGGTAAC
CCAGCACA------
A G T C A G T C C A G T A T C G A G T C A C G T A G T C C G T A A T C G C A T G A G C T G T C A C G T A G T A C
A G T C A G T C C G T A A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCTGCTCAGGTAAC
CCTGCTGAGH----
A G T C A G T C C A G T A T C G A G T C A C G T A G T C C G T A A T C G C A T G A G C T G T C A C G T A G T A C
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T

Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTCAGGTAAC
CCYCCYGCTGDG-----
A C G T A C G T A C G T A G T C A G T C C A G T A T C G A G T C A C G T A G T C C G T A A T C G C A T G A G C T G T C A C G T A G T A C
A G T C A T G C G A T C A G T C G T A C G A C T C T A G A G T C C G A T A C T G C A G T A C T G A C G T A C G T A C G T A C G T A C G T

NGA4(ABI3VP1)/col-NGA4-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCTGCTCAGGTAAC
--TKNTCAGGTG--
A G T C A G T C C A G T A T C G A G T C A C G T A G T C C G T A A T C G C A T G A G C T G T C A C G T A G T A C
A C G T A C G T G A C T A C G T C G A T A G C T A G T C C G T A A C T G A C T G C G A T C T A G A C G T A C G T

SOK2/SOK2_BUT14/4-SUT1(Harbison)/Yeast

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCTGCTCAGGTAAC
TNCCTGCA--------
A C G T A C G T A G T C A G T C C A G T A T C G A G T C A C G T A G T C C G T A A T C G C A T G A G C T G T C A C G T A G T A C
A G C T A C G T A T G C T G A C A G C T A C T G G A T C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T