Homer de novo Motif Results (tst.3UTR.mia.up.mt//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 81
Total background sequences = 49000
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 * G C A T A T C G C G T A C G A T C G T A C T G A C T A G C T A G A T C G C G T A C G T A A C G T A G T C C T A G 1e-10-2.383e+016.17%0.03%65.7bp (73.9bp)AT5G45580(G2like)/colamp-AT5G45580-DAP-Seq(GSE60143)/Homer(0.670)
More Information | Similar Motifs Found
motif file (matrix)
2 * C G T A T C G A A T G C C G T A A T G C C G T A A T G C C G T A A G T C C G T A C T A G T G C A C G T A A T C G 1e-9-2.227e+018.64%0.18%32.2bp (57.3bp)SeqBias: CA-repeat(0.692)
More Information | Similar Motifs Found
motif file (matrix)
3 * A G C T A C G T A C G T C G T A C G T A C G T A A G T C G T A C C G A T A C G T A C G T A G T C G T A C A C G T 1e-9-2.095e+016.17%0.05%22.4bp (72.4bp)Kr/MA0452.2/Jaspar(0.665)
More Information | Similar Motifs Found
motif file (matrix)
4 * G T A C G C T A T C G A G C A T C G T A G A C T T C G A G A C T C T A G A G T C G C T A A C T G T A C G C G A T 1e-6-1.497e+0112.35%1.46%57.1bp (53.2bp)MOT2/MA0379.1/Jaspar(0.592)
More Information | Similar Motifs Found
motif file (matrix)
5 * A C T G A C T G C G A T C G T A A G T C A C T G 1e-4-1.014e+0139.51%19.91%58.9bp (60.0bp)POPTR_0002s00440g/MA0955.1/Jaspar(0.822)
More Information | Similar Motifs Found
motif file (matrix)
6 * C G T A A C G T C G T A A C G T A G T C C G T A 1e-3-7.643e+0027.16%12.94%60.0bp (58.2bp)Optix/MA0199.1/Jaspar(0.905)
More Information | Similar Motifs Found
motif file (matrix)
7 * A C G T A C T G A C G T A G T C A C T G C G T A 1e-3-7.295e+0011.11%2.97%54.8bp (62.4bp)ARF8/MA0944.1/Jaspar(0.829)
More Information | Similar Motifs Found
motif file (matrix)
8 * C G T A A C G T A C G T C G T A A C G T A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T 1e-2-6.420e+001.23%0.00%0.0bp (0.0bp)CST6(MacIsaac)/Yeast(0.691)
More Information | Similar Motifs Found
motif file (matrix)
9 * A G T C A C G T C G T A A G T C A T G C C G T A 1e-2-5.482e+0013.58%5.40%59.0bp (59.0bp)schlank/MA0193.1/Jaspar(0.887)
More Information | Similar Motifs Found
motif file (matrix)