p-value: | 1e-9 |
log p-value: | -2.240e+01 |
Information Content per bp: | 1.954 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 5.80% |
Number of Background Sequences with motif | 6.9 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 58.0 +/- 45.0bp |
Average Position of motif in Background | 100.2 +/- 54.4bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Tb_0216(RRM)/Trypanosoma_brucei-RNCMPT00216-PBM/HughesRNA
Match Rank: | 1 |
Score: | 0.70 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | ATACAATGTTCA -NACAATG---- |
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dsx/dmmpmm(Bergman)/fly
Match Rank: | 2 |
Score: | 0.70 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---ATACAATGTTCA-- NTAANACAATGTANCNN |
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SOX2/MA0143.4/Jaspar
Match Rank: | 3 |
Score: | 0.68 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ATACAATGTTCA AAACAATGGAA- |
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Dmrt1/MA1603.1/Jaspar
Match Rank: | 4 |
Score: | 0.68 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -ATACAATGTTCA GATACAAAGTATC |
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SOX13/MA1120.1/Jaspar
Match Rank: | 5 |
Score: | 0.67 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ATACAATGTTCA AAACAATGGCA- |
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dmrt99B/MA1455.1/Jaspar
Match Rank: | 6 |
Score: | 0.66 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---ATACAATGTTCA-- TTGTTACAATGTATCAA |
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Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer
Match Rank: | 7 |
Score: | 0.65 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------ATACAATGTTCA ATTTGCATACAATGG--- |
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Sox17/MA0078.1/Jaspar
Match Rank: | 8 |
Score: | 0.64 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | ATACAATGTTCA -GACAATGNN-- |
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DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer
Match Rank: | 9 |
Score: | 0.64 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---ATACAATGTTCA YDGHTACAWTGTADC |
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DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer
Match Rank: | 10 |
Score: | 0.63 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---ATACAATGTTCA TWGHWACAWTGTWDC |
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