Information for 9-ATGGTGGCCA (Motif 8)

G C T A G C A T A C T G T C A G G C A T T A C G C A T G G T A C T A G C C G T A
Reverse Opposite:
G C A T A T C G C A T G G T A C A T G C C G T A A G T C T G A C C G T A C G A T
p-value:1e-17
log p-value:-4.040e+01
Information Content per bp:1.541
Number of Target Sequences with motif477.0
Percentage of Target Sequences with motif32.19%
Number of Background Sequences with motif10466.5
Percentage of Background Sequences with motif22.39%
Average Position of motif in Targets100.1 +/- 46.7bp
Average Position of motif in Background100.4 +/- 62.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RPN4/RPN4_H2O2Lo/[](Harbison)/Yeast

Match Rank:1
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:ATGGTGGCCA-
--GGTGGCAAA
G C T A G C A T A C T G T C A G G C A T T A C G C A T G G T A C T A G C C G T A A C G T
A C G T A C G T C T A G T A C G G A C T C T A G C T A G G T A C C T G A C G T A T G C A

YY2/MA0748.2/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--ATGGTGGCCA
AGATGGCGGCG-
A C G T A C G T G C T A G C A T A C T G T C A G G C A T T A C G C A T G G T A C T A G C C G T A
G T C A T A C G T C G A A G C T T A C G C T A G G A T C A T C G T A C G G T A C T A C G A C G T

TCP17(TCP)/col-TCP17-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ATGGTGGCCA-
-TGGGGACCAC
G C T A G C A T A C T G T C A G G C A T T A C G C A T G G T A C T A G C C G T A A C G T
A C G T A G C T C A T G A C T G A C T G A C T G G T C A A G T C A G T C C T G A A G T C

RPN4(MacIsaac)/Yeast

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:ATGGTGGCCA--
-CGGTGGCAAAA
G C T A G C A T A C T G T C A G G C A T T A C G C A T G G T A C T A G C C G T A A C G T A C G T
A C G T T A G C C T A G A T C G A G C T C T A G A T C G G T A C C T G A C G T A T G C A G C T A

SKN7/MA0381.1/Jaspar

Match Rank:5
Score:0.67
Offset:5
Orientation:forward strand
Alignment:ATGGTGGCCA-
-----GGCCAT
G C T A G C A T A C T G T C A G G C A T T A C G C A T G G T A C T A G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A T G C T C G A C A G T

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ATGGTGGCCA--
CYWSTGGTCARA
G C T A G C A T A C T G T C A G G C A T T A C G C A T G G T A C T A G C C G T A A C G T A C G T
G A T C G A C T C G T A T A G C C G A T A C T G A C T G G A C T T G A C C G T A T C A G C T G A

RPN4/MA0373.1/Jaspar

Match Rank:7
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ATGGTGGCCA
--GGTGGCG-
G C T A G C A T A C T G T C A G G C A T T A C G C A T G G T A C T A G C C G T A
A C G T A C G T C T A G A C T G A C G T A C T G A C T G A G T C C T A G A C G T

Vts1p(SAM)/Saccharomyces_cerevisiae-RNCMPT00082-PBM/HughesRNA

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ATGGTGGCCA
-NGCTGGCC-
G C T A G C A T A C T G T C A G G C A T T A C G C A T G G T A C T A G C C G T A
A C G T A G C T A C T G A G T C C G A T A C T G A C T G G A T C A T G C A C G T

ASHR1(ND)/col-ASHR1-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ATGGTGGCCA
NTGGTGAN--
G C T A G C A T A C T G T C A G G C A T T A C G C A T G G T A C T A G C C G T A
C T G A C G A T C A T G A T C G G C A T C A T G G C T A A G T C A C G T A C G T

AGL55/MA1202.1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATGGTGGCCA
-TGGTGA---
G C T A G C A T A C T G T C A G G C A T T A C G C A T G G T A C T A G C C G T A
A C G T A C G T A C T G A C T G A C G T A C T G T C G A A C G T A C G T A C G T