p-value: | 1e-12 |
log p-value: | -2.932e+01 |
Information Content per bp: | 1.966 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 4.17% |
Number of Background Sequences with motif | 3.4 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 45.6 +/- 22.3bp |
Average Position of motif in Background | 93.3 +/- 37.8bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RO3G_00049(RRM)/Rhizopus_oryzae-RNCMPT00205-PBM/HughesRNA
Match Rank: | 1 |
Score: | 0.74 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TTTCCCCTGTGT -TTCCCCT---- |
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NDD1(MacIsaac)/Yeast
Match Rank: | 2 |
Score: | 0.68 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TTTCCCCTGTGT TTTCCCCTTT-- |
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Pcbp2(KH)/Danio_rerio-RNCMPT00246-PBM/HughesRNA
Match Rank: | 3 |
Score: | 0.68 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TTTCCCCTGTGT NTTTCCC------ |
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REI1/MA0364.1/Jaspar
Match Rank: | 4 |
Score: | 0.65 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TTTCCCCTGTGT ---CCCCTGA-- |
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RELB/MA1117.1/Jaspar
Match Rank: | 5 |
Score: | 0.64 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TTTCCCCTGTGT GAATTCCCCGG--- |
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PCBP3(KH)/Mus_musculus-RNCMPT00215-PBM/HughesRNA
Match Rank: | 6 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TTTCCCCTGTGT CTTTCCCT----- |
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MSN4/Literature(Harbison)/Yeast
Match Rank: | 7 |
Score: | 0.64 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TTTCCCCTGTGT --NCCCCTG--- |
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PCBP1(KH)/Mus_musculus-RNCMPT00239-PBM/HughesRNA
Match Rank: | 8 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TTTCCCCTGTGT CCTTTCCC------ |
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MSN4/MA0342.1/Jaspar
Match Rank: | 9 |
Score: | 0.62 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TTTCCCCTGTGT ---CCCCT---- |
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NHP10/MA0344.1/Jaspar
Match Rank: | 10 |
Score: | 0.62 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TTTCCCCTGTGT --TCCCCGGC-- |
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