Information for 4-ARGACRGCWCGG (Motif 4)

G T C A C T A G A C T G C T G A A T G C C T A G C T A G A T G C C G T A A G T C A C T G A T C G
Reverse Opposite:
T A G C G T A C T C A G G C A T T A C G G A T C G A T C A T C G G A C T T G A C G A T C C A G T
p-value:1e-29
log p-value:-6.811e+01
Information Content per bp:1.584
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.83%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets138.0 +/- 44.4bp
Average Position of motif in Background124.6 +/- 44.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

JDP2(var.2)/MA0656.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ARGACRGCWCGG
GATGACGTCATC-
A C G T G T C A C T A G A C T G C T G A A T G C C T A G C T A G A T G C C G T A A G T C A C T G A T C G
T A C G T C G A A G C T C A T G G T C A A G T C T C A G G A C T T G A C T G C A A G C T T G A C A C G T

SRSF1(RRM)/Homo_sapiens-RNCMPT00110-PBM/HughesRNA

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ARGACRGCWCGG
CAGGACAN-----
A C G T G T C A C T A G A C T G C T G A A T G C C T A G C T A G A T G C C G T A A G T C A C T G A T C G
G T A C C G T A A C T G A C T G C G T A A T G C G T C A T G C A A C G T A C G T A C G T A C G T A C G T

ERF8(AP2EREBP)/colamp-ERF8-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ARGACRGCWCGG
WATGRCGGCG---
A C G T G T C A C T A G A C T G C T G A A T G C C T A G C T A G A T G C C G T A A G T C A C T G A T C G
C G T A C G T A G C A T C A T G C T G A A G T C A C T G A T C G A G T C C A T G A C G T A C G T A C G T

Creb5/MA0840.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ARGACRGCWCGG
AATGACGTCACC-
A C G T G T C A C T A G A C T G C T G A A T G C C T A G C T A G A T G C C G T A A G T C A C T G A T C G
T C G A T C G A G A C T C A T G C G T A A G T C C T A G G C A T G T A C C G T A A G T C G A T C A C G T

JUN::JUNB(var.2)/MA1133.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ARGACRGCWCGG
NATGACGTCACA-
A C G T G T C A C T A G A C T G C T G A A T G C C T A G C T A G A T G C C G T A A G T C A C T G A T C G
T G C A T G C A G A C T C A T G G T C A G A T C T C A G G C A T G T A C C G T A A G T C T G C A A C G T

unc-62/MA0918.1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ARGACRGCWCGG
NNNTGACAGCTN--
A C G T A C G T G T C A C T A G A C T G C T G A A T G C C T A G C T A G A T G C C G T A A G T C A C T G A T C G
C G T A C G T A T C G A C G A T A C T G C G T A A G T C C G T A C A T G A T G C A C G T A G T C A C G T A C G T

ZmHOX2a(1)(HD-HOX)/Zea mays/AthaMap

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ARGACRGCWCGG
TTAGGAC-------
A C G T A C G T G T C A C T A G A C T G C T G A A T G C C T A G C T A G A T G C C G T A A G T C A C T G A T C G
C G A T A G C T C G T A A C T G A C T G C G T A G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

JUNB(var.2)/MA1140.2/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ARGACRGCWCGG
GATGACGTCATC-
A C G T G T C A C T A G A C T G C T G A A T G C C T A G C T A G A T G C C G T A A G T C A C T G A T C G
C T A G T C G A A C G T A C T G T C G A A G T C A T C G A G C T T G A C G T C A A G C T T A G C A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----ARGACRGCWCGG-
GATATTGACAGCTGCGT
A C G T A C G T A C G T A C G T G T C A C T A G A C T G C T G A A T G C C T A G C T A G A T G C C G T A A G T C A C T G A T C G A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

FOSB::JUNB(var.2)/MA1136.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ARGACRGCWCGG
ATGACGTCAT--
G T C A C T A G A C T G C T G A A T G C C T A G C T A G A T G C C G T A A G T C A C T G A T C G
T C G A G C A T A C T G C T G A A G T C C T A G A G C T T G A C C T G A A G C T A C G T A C G T