p-value: | 1e-10 |
log p-value: | -2.406e+01 |
Information Content per bp: | 1.617 |
Number of Target Sequences with motif | 158.0 |
Percentage of Target Sequences with motif | 18.70% |
Number of Background Sequences with motif | 5252.3 |
Percentage of Background Sequences with motif | 11.03% |
Average Position of motif in Targets | 71.0 +/- 61.9bp |
Average Position of motif in Background | 101.2 +/- 60.7bp |
Strand Bias (log2 ratio + to - strand density) | -1.3 |
Multiplicity (# of sites on avg that occur together) | 1.09 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
VRN1(ABI3VP1)/col-VRN1-DAP-Seq(GSE60143)/Homer
Match Rank: | 1 |
Score: | 0.78 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | AAAAAAAAAAAAAA ----AAAAAAAAAA |
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SeqBias: polyA-repeat
Match Rank: | 2 |
Score: | 0.78 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | AAAAAAAAAAAAAA ----AAAAAAAAAA |
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OBP3/MA1274.1/Jaspar
Match Rank: | 3 |
Score: | 0.76 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AAAAAAAAAAAAAA----- AAAAAAAAAANAAAAAGTAAA |
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IDD5(C2H2)/colamp-IDD5-DAP-Seq(GSE60143)/Homer
Match Rank: | 4 |
Score: | 0.73 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AAAAAAAAAAAAAA- MAVAAAAAGACAAAA |
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AT3G45610/MA1270.1/Jaspar
Match Rank: | 5 |
Score: | 0.72 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AAAAAAAAAAAAAA----- AAAAAAANNAAAAAGTAAA |
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AT1G69570/MA1268.1/Jaspar
Match Rank: | 6 |
Score: | 0.71 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------AAAAAAAAAAAAAA------- AAAAAAAAAAAAAAGAAAAAGTGAAAA |
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SGR5/MA1159.1/Jaspar
Match Rank: | 7 |
Score: | 0.71 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AAAAAAAAAAAAAA AAAAAAAGACAAAAA |
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PB0182.1_Srf_2/Jaspar
Match Rank: | 8 |
Score: | 0.70 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----AAAAAAAAAAAAAA GTTAAAAAAAAAAATTA- |
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ZNF384/MA1125.1/Jaspar
Match Rank: | 9 |
Score: | 0.70 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AAAAAAAAAAAAAA --TTTAAAAAAAAA |
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COG1/MA1279.1/Jaspar
Match Rank: | 10 |
Score: | 0.70 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AAAAAAAAAAAAAA------- AAAAAAAAGAAAAAGTGAAAA |
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